Research Output 1965 2020

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Review article
2009

Industrial biotechnology: Tools and applications

Tang, W. L. & Zhao, H., Dec 1 2009, In : Biotechnology Journal. 4, 12, p. 1725-1739 15 p.

Research output: Contribution to journalReview article

Biotechnology
Synthetic Biology
Industrial Waste
Metabolic Engineering
Protein Engineering

International Journal of Adaptive Control and Signal Processing: Editorial

Bentsman, J. & Orlov, Y., Feb 1 2009, In : International Journal of Adaptive Control and Signal Processing. 23, 2, p. 111-113 3 p.

Research output: Contribution to journalReview article

Signal processing
Fault detection

Mechanics of stretchable inorganic electronic materials

Song, J., Jiang, H., Huang, Y. & Rogers, J. A., Sep 21 2009, In : Journal of Vacuum Science and Technology A: Vacuum, Surfaces and Films. 27, 5, p. 1107-1125 19 p.

Research output: Contribution to journalReview article

Mechanics
inorganic materials
electronics
ribbons
mesh

Mechanobiology of the skeleton

Turner, C. H., Warden, S. J., Bellido, T., Plotkin, L. I., Kumar, N., Jasiuk, I., Danzig, J. & Robling, A. G., Apr 28 2009, In : Science Signaling. 2, 68, p. pt3

Research output: Contribution to journalReview article

Biophysics
Skeleton
Bone
Bone and Bones
Osteocytes

Modelling of high-enthalpy, high-Mach number flows

Degrez, G., Lani, A., Panesi, M., Chazot, O. & Deconinck, H., Nov 9 2009, In : Journal of Physics D: Applied Physics. 42, 19, 194004.

Research output: Contribution to journalReview article

Mach number
Enthalpy
enthalpy
chemical equilibrium
hypersonic reentry

Molecular dynamics simulations of membrane channels and transporters

Khalili-Araghi, F., Gumbart, J., Wen, P. C., Sotomayor, M., Tajkhorshid, E. & Schulten, K., Apr 1 2009, In : Current Opinion in Structural Biology. 19, 2, p. 128-137 10 p.

Research output: Contribution to journalReview article

Membrane Transport Proteins
Molecular Dynamics Simulation
Ion Channels
Aquaporins
Proteins

Nomenclature for factors of the SLA system, update 2008

Ho, C. S., Lunney, J. K., Ando, A., Rogel-Gaillard, C., Lee, J. H., Schook, L. B. & Smith, D. M., Apr 2009, In : Tissue Antigens. 73, 4, p. 307-315 9 p.

Research output: Contribution to journalReview article

Terminology
Alleles
swine leukocyte antigen
Databases
Major Histocompatibility Complex

Programming structure into 3D nanomaterials

Van Gough, D., Juhl, A. T. & Braun, P. V., Jun 1 2009, In : Materials Today. 12, 6, p. 28-35 8 p.

Research output: Contribution to journalReview article

solar energy
energy storage
programming
Nanostructured materials
delivery

Protein dynamics: From molecules, to interactions, to biology

Gruebele, M., Mar 1 2009, In : International journal of molecular sciences. 10, 3, p. 1360-1368 9 p.

Research output: Contribution to journalReview article

biology
proteins
Proteins
Molecules
molecules

Protein engineering in designing tailored enzymes and microorganisms for biofuels production

Wen, F., Nair, N. U. & Zhao, H., Aug 1 2009, In : Current Opinion in Biotechnology. 20, 4, p. 412-419 8 p.

Research output: Contribution to journalReview article

Protein Engineering
Biofuels
Microorganisms
Enzymes
Proteins

Protein-membrane interactions: Blood clotting on nanoscale bilayers

Morrissey, J. H., Pureza, V., Davis-Harrison, R. L., Sligar, S. G., Rienstra, C. M., Kijac, A. Z., Ohkubo, Y. Z. & Tajkhorshid, E., Aug 4 2009, In : Journal of Thrombosis and Haemostasis. 7, SUPPL. 1, p. 169-172 4 p.

Research output: Contribution to journalReview article

Blood Coagulation
Phospholipids
Membrane Proteins
Peptide Hydrolases
Membrane Microdomains

Recognizing textual entailment: Rational, evaluation and approaches

Dagan, I., Dolan, B., Magnini, B. & Roth, D., Oct 2009, In : Natural Language Engineering. 15, 4

Research output: Contribution to journalReview article

Knowledge representation
learning method
language
evaluation
Semantics

Segmental dynamics in polymers: From cold melts to ageing and stressed glasses

Chen, K., Saltzman, E. J. & Schweizer, K. S., Dec 18 2009, In : Journal of Physics Condensed Matter. 21, 50, 503101.

Research output: Contribution to journalReview article

Polymers
Aging of materials
Glass
glass
polymers

The parallelization of video processing: From programming models to applications

Lin, D., Huang, X., Nguyen, Q., Blackburn, J., Rodrigues, C., Huang, T. S., Do, M. N., Patel, S. J. & Hwu, W-M. W., Jan 1 2009, In : IEEE Signal Processing Magazine. 26, 6, p. 103-112 10 p.

Research output: Contribution to journalReview article

Video Processing
Parallelization
Programming Model
Digital Video
Processing

Ultrathin films of single-walled carbon nanotubes for electronics and sensors: A review of fundamental and applied aspects

Cao, Q. & Rogers, J. A., Jan 5 2009, In : Advanced Materials. 21, 1, p. 29-53 25 p.

Research output: Contribution to journalReview article

Ultrathin films
Single-walled carbon nanotubes (SWCN)
Electronic equipment
Sensors
Optoelectronic devices
2010

A global-local approach to nonlinear system identification: A review

Lee, Y. S., Vakakis, A. F., McFarland, D. M. & Bergman, L., Nov 1 2010, In : Structural Control and Health Monitoring. 17, 7, p. 742-760 19 p.

Research output: Contribution to journalReview article

Nonlinear systems
Identification (control systems)
Dynamical systems
Time series
Decomposition

An experimental methodology to relate local strain to microstructural texture

Carroll, J., Abuzaid, W., Lambros, J. & Sehitoglu, H., Aug 1 2010, In : Review of Scientific Instruments. 81, 8, 083703.

Research output: Contribution to journalReview article

textures
Textures
methodology
strain measurement
Strain measurement

Anisotropic nanocrystal heterostructures: Synthesis and lattice strain

Shim, M. & McDaniel, H., Oct 2010, In : Current Opinion in Solid State and Materials Science. 14, 5, p. 83-94 12 p.

Research output: Contribution to journalReview article

Crystal lattices
Nanocrystals
Heterojunctions
Nanocrystalline materials
Hybrid materials

A novel platform for in situ investigation of cells and tissues under mechanical strain

Ahmed, W. W., Kural, M. H. & Saif, M. T. A., Aug 2010, In : Acta Biomaterialia. 6, 8, p. 2979-2990 12 p.

Research output: Contribution to journalReview article

Tissue
Fibroblasts
Actins
Embryonic Structures
Drosophila

Approaches to multimodality imaging of angiogenesis

Dobrucki, L. W., De Muinck, E. D., Lindner, J. R. & Sinusas, A. J., Dec 1 2010, In : Journal of Nuclear Medicine. 51, SUPPL.1, p. 66S-79S

Research output: Contribution to journalReview article

Microvessels
Perfusion

A review of new analytic techniques for quantifying symmetry in locomotion

Hsiao-Wecksler, E. T., Polk, J. D., Rosengren, K. S., Sosnoff, J. J. & Hong, S., Jun 1 2010, In : Symmetry. 2, 2, p. 1135-1155 21 p.

Research output: Contribution to journalReview article

Wheelchairs
locomotion
Locomotion
Propulsion
Data acquisition

Brunswikian theory and method as a foundation for simulation-based research on clinical judgment

Kirlik, A., Oct 1 2010, In : Simulation in Healthcare. 5, 5, p. 255-259 5 p.

Research output: Contribution to journalReview article

Medical Education
Medical education
Manikins
Health Knowledge, Attitudes, Practice
Clinical Competence

Capturing functional motions of membrane channels and transporters with molecular dynamics simulation

Shaikh, S. A., Wen, P. C., Enkavi, G., Huang, Z. & Tajkhorshid, E., Dec 1 2010, In : Journal of Computational and Theoretical Nanoscience. 7, 12, p. 2481-2500 20 p.

Research output: Contribution to journalReview article

transporter
Membrane Transport Proteins
Ion Channels
Molecular Dynamics Simulation
Molecular dynamics

Ceramics and ceramic matrix composites for heat exchangers in advanced thermal systems-A review

Sommers, A., Wang, Q., Han, X., T'Joen, C., Park, Y. & Jacobi, A. M., Aug 1 2010, In : Applied Thermal Engineering. 30, 11-12, p. 1277-1291 15 p.

Research output: Contribution to journalReview article

Ceramic matrix composites
Heat exchangers
Tubes (components)
Materials science
Ceramic materials

Dynamic optical coherence elastography: A review

Liang, X., Crecea, V. & Boppart, S. A., Oct 1 2010, In : Journal of Innovative Optical Health Sciences. 3, 4, p. 221-233 13 p.

Research output: Contribution to journalReview article

Elasticity Imaging Techniques
Tissue
Imaging techniques
biodynamics
Biomechanics

Electroreduction of dioxygen for fuel-cell applications: Materials and challenges

Gewirth, A. A. & Thorum, M. S., Apr 19 2010, In : Inorganic Chemistry. 49, 8, p. 3557-3566 10 p.

Research output: Contribution to journalReview article

fuel cells
Fuel cells
Oxygen
Chalcogenides
Catalysts

Enzymatic corn wet milling process: Enzyme optimization & commercial trial

Singh, V., Johnston, D. B. & Neoh, S. L., Feb 1 2010, In : Industrial Biotechnology. 6, 1, p. 34-40 7 p.

Research output: Contribution to journalReview article

Starch
Zea mays
Enzymes
Peptide Hydrolases
Sulfur Dioxide

Experimental and computational determination of tRNA dynamics

Alexander, R. W., Eargle, J. & Luthey-Schulten, Z., Jan 21 2010, In : FEBS Letters. 584, 2, p. 376-386 11 p.

Research output: Contribution to journalReview article

Transfer RNA
Genetic Code
Proteins
Machinery
Molecular Biology

Exploring transmembrane diffusion pathways with molecular dynamics

Wang, Y., Shaikh, S. A. & Tajkhorshid, E., Jun 2010, In : Physiology. 25, 3, p. 142-154 13 p.

Research output: Contribution to journalReview article

Molecular Dynamics Simulation
Gases
Lipids
Membranes
Water

Feedstocks for lignocellulosic biofuels

Somerville, C., Youngs, H., Taylor, C., Davis, S. C. & Long, S. P., Aug 13 2010, In : Science. 329, 5993, p. 790-792 3 p.

Research output: Contribution to journalReview article

Biofuels
Food
Greenhouse Effect
Germany
Ecosystem

Fishing for the hidden peptidome in health and disease (Drug Abuse)

Fricker, L. D. & Sweedler, J. V., Dec 1 2010, In : AAPS Journal. 12, 4, p. 679-682 4 p.

Research output: Contribution to journalReview article

Substance-Related Disorders
Health
Proteins
Peptides
Peptide Receptors

Fourier transform light scattering (FTLS) of cells and tissues

Ding, H., Wang, Z., Nguyen, F. T., Boppart, S. A., Millet, L. J., Gillette, M. U., Liu, J., Boppart, M. D. & Popescu, G., Dec 1 2010, In : Journal of Computational and Theoretical Nanoscience. 7, 12, p. 2501-2511 11 p.

Research output: Contribution to journalReview article

Light Scattering
Light scattering
Fourier transform
Fourier transforms
light scattering

Fourier transform light scattering of biological structure and dynamics

Ding, H., Berl, E., Wang, Z., Millet, L. J., Gillette, M. U., Liu, J., Boppart, M. & Popescu, G., Jul 1 2010, In : IEEE Journal on Selected Topics in Quantum Electronics. 16, 4, p. 909-918 10 p., 5443519.

Research output: Contribution to journalReview article

Light scattering
Fourier transforms
light scattering
Tissue
Dynamic light scattering

Fractionalize this

Phillips, P., Dec 2010, In : Nature Physics. 6, 12, p. 931-933 3 p.

Research output: Contribution to journalReview article

Hybrid lattice particle modelling approach for polymeric materials subject to high strain rate loads

Wang, G., Cheng, A. H. D., Ostoja-Starzewski, M., Al-Ostaz, A. & Radziszewski, P., Mar 1 2010, In : Polymers. 2, 1, p. 3-30 28 p.

Research output: Contribution to journalReview article

Strain rate
Polymers
Poisson ratio
Hybrid materials
Indentation

Inching over hurdles: How DNA helicases move on crowded lattices

Spies, M. & Ha, T., May 1 2010, In : Cell Cycle. 9, 9, p. 1742-1749 8 p.

Research output: Contribution to journalReview article

DNA-Binding Proteins
Maintenance
Genome
Recombinational DNA Repair
Enzyme Activation

In situ uniaxial mechanical testing of small scale materials - A review

Kang, W., Rajagopalan, J. & Saif, M. T. A., Dec 2010, In : Nanoscience and Nanotechnology Letters. 2, 4, p. 282-287 6 p.

Research output: Contribution to journalReview article

Mechanical testing
Mechanical properties
Testing

Instability, intermixing and electronic structure at the epitaxial LaAlO3SrTiO3(001) heterojunction

Chambers, S. A., Engelhard, M. H., Shutthanandan, V., Zhu, Z., Droubay, T. C., Qiao, L., Sushko, P. V., Feng, T., Lee, H. D., Gustafsson, T., Garfunkel, E., Shah, A. B., Zuo, J. M. & Ramasse, Q. M., Oct 2010, In : Surface Science Reports. 65, 10-12, p. 317-352 36 p.

Research output: Contribution to journalReview article

Electronic structure
Heterojunctions
heterojunctions
electronic structure
Valence bands

Materials and mechanics for stretchable electronics

Rogers, J. A., Someya, T. & Huang, Y., Mar 26 2010, In : Science. 327, 5973, p. 1603-1607 5 p.

Research output: Contribution to journalReview article

Mechanics
Technology
Light
Equipment and Supplies
Research

Memory models: A case for rethinking parallel languages and hardware

Adve, S. V. & Boehm, H. J., Aug 1 2010, In : Communications of the ACM. 53, 8, p. 90-101 12 p.

Research output: Contribution to journalReview article

Hardware
Data storage equipment

Metal-catalyzed semiconductor nanowires: A review on the control of growth directions

Fortuna, S. A. & Li, X., Feb 22 2010, In : Semiconductor Science and Technology. 25, 2, 024005.

Research output: Contribution to journalReview article

Nanowires
nanowires
Metals
Semiconductor materials
Vapors

Microscopic imaging and spectroscopy with scattered light

Boustany, N. N., Boppart, S. A. & Backman, V., Aug 15 2010, In : Annual Review of Biomedical Engineering. 12, p. 285-314 30 p.

Research output: Contribution to journalReview article

Spectrum Analysis
Spectroscopy
Tissue
Imaging techniques
Light

Molecular diagnostic and drug delivery agents based on aptamer-nanomaterial conjugates

Lee, J. H., Yigit, M. V., Mazumdar, D. & Lu, Y., Apr 1 2010, In : Advanced Drug Delivery Reviews. 62, 6, p. 592-605 14 p.

Research output: Contribution to journalReview article

Molecular Pathology
Nanostructures
Nanoparticles
Quantum Dots
Carbon Nanotubes

More than taking the heat: crops and global change.

Long, S. P. & Ort, D. R., Jun 1 2010, In : Current opinion in plant biology. 13, 3, p. 241-248 8 p.

Research output: Contribution to journalReview article

global change
heat
cultivars
crops
grain crops

Multidimensional architectures for functional optical devices

Arpin, K. A., Mihi, A., Johnson, H. T., Baca, A. J., Rogers, J. A., Lewis, J. A. & Braun, P. V., Mar 12 2010, In : Advanced Materials. 22, 10, p. 1084-1101 18 p.

Research output: Contribution to journalReview article

Optical devices
Metamaterials
Photonics
Solar cells
Energy gap

Nanofluidics in chemical analysis

Piruska, A., Gong, M., Sweedler, J. V. & Bohn, P. W., Mar 1 2010, In : Chemical Society Reviews. 39, 3, p. 1060-1072 13 p.

Research output: Contribution to journalReview article

Nanofluidics
Nanopores
Chemical analysis
Microfluidics
Microsensors

Nanopore sensors for nucleic acid analysis

Venkatesan, B. M. & Bashir, R., Oct 2010, In : Nature Nanotechnology. 6, 10, p. 615-624 10 p.

Research output: Contribution to journalReview article

Nanopores
Nucleic acids
nucleic acids
Nucleic Acids
DNA

NSF's response to Gulf oil spill

Killeen, T., Aug 19 2010, In : Eos. 91, 29, 1 p.

Research output: Contribution to journalReview article

oil spill
academic research
hurricane
gulf
disaster

Progress review of electromagnetic compatibility analysis technologies for packages, printed circuit boards, and novel interconnects

Li, E. P., Wei, X. C., Cangellaris, A. C., Liu, E. X., Zhang, Y. J., D'amore, M., Kim, J. & Sudo, T., May 1 2010, In : IEEE Transactions on Electromagnetic Compatibility. 52, 2, p. 248-265 18 p., 5464324.

Research output: Contribution to journalReview article

electromagnetic compatibility
Electromagnetic compatibility
printed circuits
circuit boards
Printed circuit boards

Recovery of rectified signals from hot-wire/film anemometers due to flow reversal in oscillating flows

Yang, Y., Jones, D. L. & Liu, C., Feb 8 2010, In : Review of Scientific Instruments. 81, 1, 015104.

Research output: Contribution to journalReview article

oscillating flow
Oscillating flow
anemometers
Anemometers
recovery