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2019

Coupling Methods for HTR-PM Multicircuit Problem

Lu, J., Guo, J., Kozlowski, T. & Li, F., Feb 1 2019, In : Nuclear Science and Engineering. 193, 1-2, p. 131-146 16 p.

Research output: Contribution to journalArticle

Networks (circuits)
Steam generators
Reactor cores
Convergence of numerical methods
Newton-Raphson method

Coupling point defects and potential energy surface exploration

McGuigan, B. C., Johnson, H. T. & Pochet, P., Aug 2019, In : Computational Materials Science. 166, p. 1-8 8 p.

Research output: Contribution to journalArticle

Potential Energy Surface
Point Defects
Potential energy surfaces
Point defects
point defects

Crack-assisted, localized deformation of van der waals materials for enhanced strain confinement

Leem, J., Lee, Y., Wang, M. C., Kim, J. M., Mun, J., Haque, M. F., Kang, S. W. & Nam, S., Jul 24 2019, In : 2D Materials. 6, 4, 044001.

Research output: Contribution to journalArticle

graphene
Graphite
cracks
Cracks
Graphene

C-reaction protein detection in human saliva by nanoplasmonic color imaging

Hu, W., Dang, T., Li, Z., Lei, L., Wang, G., Li, Y., Xu, H., Zhou, Z. & Liu, G. L., Jan 1 2019, In : Journal of Biomedical Nanotechnology. 16, 8, p. 1724-1733 10 p.

Research output: Contribution to journalArticle

Protein C
Saliva
Color
Proteins
Imaging techniques

Creep and thermal cracking of ultra-high volume fly ash mass concrete at early age

Zhao, Z., Wang, K., Lange, D. A., Zhou, H., Wang, W. & Zhu, D., May 2019, In : Cement and Concrete Composites. 99, p. 191-202 12 p.

Research output: Contribution to journalArticle

Coal Ash
Fly ash
Creep
Concretes
Curing

CRISPR-Cas9-Mediated Genome Editing Increases Lifespan and Improves Motor Deficits in a Huntington's Disease Mouse Model

Ekman, F. K., Ojala, D. S., Adil, M. M., Lopez, P. A., Schaffer, D. V. & Gaj, T., Sep 6 2019, In : Molecular Therapy - Nucleic Acids. 17, p. 829-839 11 p.

Research output: Contribution to journalArticle

Open Access
Clustered Regularly Interspaced Short Palindromic Repeats
Huntington Disease
Trinucleotide Repeat Expansion
Neurodegenerative Diseases
Genes

Critical Exploration of Liquid Metal Plasma-Facing Components in a Fusion Nuclear Science Facility

Kessel, C. E., Andruczyk, D., Blanchard, J. P., Bohm, T., Davis, A., Hollis, K., Humrickhouse, P. W., Hvasta, M., Jaworski, M., Jun, J., Katoh, Y., Khodak, A., Klein, J., Kolemen, E., Larsen, G., Majeski, R., Merrill, B. J., Morley, N. B., Neilson, G. H., Pint, B. & 9 others, Rensink, M. E., Rognlien, T. D., Rowcliffe, A. F., Smolentsev, S., Tillack, M. S., Waganer, L. M., Wallace, G. M., Wilson, P. & Yoon, S. J., Nov 17 2019, In : Fusion Science and Technology. 75, 8, p. 886-917 32 p.

Research output: Contribution to journalArticle

Facings
liquid metals
Liquid metals
nuclear fusion
Fusion reactions

Critical Knowledge Gaps in Mass Transport through Single-Digit Nanopores: A Review and Perspective

Faucher, S., Aluru, N. R., Bazant, M. Z., Blankschtein, D., Brozena, A. H., Cumings, J., Pedro De Souza, J., Elimelech, M., Epsztein, R., Fourkas, J. T., Rajan, A. G., Kulik, H. J., Levy, A., Majumdar, A., Martin, C., McEldrew, M., Misra, R. P., Noy, A., Pham, T. A., Reed, M. & 4 others, Schwegler, E., Siwy, Z., Wang, Y. & Strano, M., Sep 5 2019, In : Journal of Physical Chemistry C. 123, 35, p. 21309-21326 18 p.

Research output: Contribution to journalArticle

Nanopores
digits
Mass transfer
porosity
water treatment

Cross-species systems analysis of evolutionary toolkits of neurogenomic response to social challenge

Saul, M. C., Blatti, C., Yang, W., Bukhari, S. A., Shpigler, H. Y., Troy, J. M., Seward, C. H., Sloofman, L., Chandrasekaran, S., Bell, A. M., Stubbs, L., Robinson, G. E., Zhao, S. D. & Sinha, S., Jan 2019, In : Genes, Brain and Behavior. p. e12502

Research output: Contribution to journalArticle

Systems Analysis
Synaptic Transmission
Genetic Phenomena
Genes
Smegmamorpha

Cross-type biomedical named entity recognition with deep multi-task learning

Wang, X., Zhang, Y., Ren, X., Zhang, Y., Zitnik, M., Shang, J., Langlotz, C. & Han, J., May 15 2019, In : Bioinformatics. 35, 10, p. 1745-1752 8 p.

Research output: Contribution to journalArticle

Multi-task Learning
Named Entity Recognition
Learning
Labeling
Benchmarking

Crushing Performance of Ultra-Lightweight Foam Concrete with Fine Particle Inclusions

Song, Y. & Lange, D. A., Mar 1 2019, In : Applied Sciences (Switzerland). 9, 5, 14 p., 876.

Research output: Contribution to journalArticle

Open Access
crushing
Crushing
foams
Foams
Concretes
polyhedrons
Cations
Neutron powder diffraction
Crystal structure
Positive ions

CuGaS 2 -CuInE 2 (E = S, Se) Colloidal Nanorod Heterostructures

Oh, N., Keating, L. P., Drake, G. A. & Shim, M., Mar 26 2019, In : Chemistry of Materials. 31, 6, p. 1973-1980 8 p.

Research output: Contribution to journalArticle

Nanorods
Heterojunctions
Photoluminescence
Brushes
Optical properties

CyberGIS-Jupyter for reproducible and scalable geospatial analytics

Yin, D., Liu, Y., Hu, H., Terstriep, J., Hong, X., Padmanabhan, A. & Wang, S., Jun 10 2019, In : Concurrency Computation. 31, 11, e5040.

Research output: Contribution to journalArticle

Information science
Information systems
Gateway
Supercomputers
Cloud computing

Cyber Literacy for GIScience: Toward Formalizing Geospatial Computing Education

Shook, E., Bowlick, F. J., Kemp, K. K., Ahlqvist, O., Carbajeles-Dale, P., DiBiase, D., Kim, E. K., Lathrop, S., Ricker, B., Rickles, P., Rush, J. F., Swift, J. N. & Wang, S., Apr 3 2019, In : Professional Geographer. 71, 2, p. 221-238 18 p.

Research output: Contribution to journalArticle

literacy
education
Geographical Information System
innovation
learning

Cytometric fingerprinting and machine learning (CFML): A novel label-free, objective method for routine mastitis screening

Dhoble, A. S., Ryan, K. T., Lahiri, P., Chen, M., Pang, X., Cardoso, F. & Bhalerao, K., Jul 2019, In : Computers and Electronics in Agriculture. 162, p. 505-513 9 p.

Research output: Contribution to journalArticle

artificial intelligence
milk
mastitis
Learning systems
Labels

Dark Energy Survey Year 1 results: Methodology and projections for joint analysis of galaxy clustering, galaxy lensing, and CMB lensing two-point functions

Baxter, E. J., Omori, Y., Chang, C., Giannantonio, T., Kirk, D., Krause, E., Blazek, J., Bleem, L., Choi, A., Crawford, T. M., Dodelson, S., Eifler, T. F., Friedrich, O., Gruen, D., Holder, G. P., Jain, B., Jarvis, M., Maccrann, N., Nicola, A., Pandey, S. & 74 others, Prat, J., Reichardt, C. L., Samuroff, S., Sánchez, C., Secco, L. F., Sheldon, E., Troxel, M. A., Zuntz, J., Abbott, T. M. C., Abdalla, F. B., Annis, J., Avila, S., Bechtol, K., Benson, B. A., Bertin, E., Brooks, D., Buckley-Geer, E., Burke, D. L., Carnero Rosell, A., Carrasco Kind, M., Carretero, J., Castander, F. J., Cawthon, R., Cunha, C. E., D'Andrea, C. B., Da Costa, L. N., Davis, C., De Vicente, J., Depoy, D. L., Diehl, H. T., Doel, P., Estrada, J., Evrard, A. E., Flaugher, B., Fosalba, P., Frieman, J., García-Bellido, J., Gaztanaga, E., Gerdes, D. W., Gruendl, R. A., Gschwend, J., Gutierrez, G., Hartley, W. G., Hollowood, D., Hoyle, B., James, D. J., Kent, S., Kuehn, K., Kuropatkin, N., Lahav, O., Lima, M., Maia, M. A. G., March, M., Marshall, J. L., Melchior, P., Menanteau, F., Miquel, R., Plazas, A. A., Roodman, A., Rykoff, E. S., Sanchez, E., Schindler, R., Schubnell, M., Sevilla-Noarbe, I., Smith, M., Smith, R. C., Soares-Santos, M., Sobreira, F., Suchyta, E., Swanson, M. E. C., Tarle, G., Walker, A. R., Wu, W. L. K. & Weller, J., Jan 15 2019, In : Physical Review D. 99, 2, 023508.

Research output: Contribution to journalArticle

dark energy
projection
methodology
galaxies
poles

Database audit workload prioritization via game theory

Yan, C., Li, B., Vorobeychik, Y., Laszka, A., Fabbri, D. & Malin, B., Jun 10 2019, In : ACM Transactions on Privacy and Security. 22, 3, 17.

Research output: Contribution to journalArticle

Game theory
Data privacy
Linear programming
Computational complexity

Data Challenges and Solutions in Energy-for-Water: Experience From Two Recent Studies

Sowby, R. B., Burian, S. J., Chini, C. M. & Stillwell, A. S., Feb 1 2019, In : Journal - American Water Works Association. 111, 2, p. 28-33 6 p.

Research output: Contribution to journalArticle

data management
data acquisition
Information management
management practice
Data acquisition

Data clustering and graph partitioning via simulated mixing

Bhatti, S., Beck, C. & Nedić, A., Apr 3 2019, In : IEEE Transactions on Network Science and Engineering. 6, 3, p. 1-14 14 p., 8331142.

Research output: Contribution to journalArticle

Eigenvalues and eigenfunctions
Clustering algorithms
Computational complexity
Decomposition

Data-Driven and Precursor-Group Uncertainty Propagation of Lattice Kinetic Parameters in UAM Benchmark

Radaideh, M. I., Kozlowski, T., Wieselquist, W. A. & Jessee, M. A., Jan 1 2019, In : Science and Technology of Nuclear Installations. 2019, 3702014.

Research output: Contribution to journalArticle

Open Access
Kinetic parameters
Neutrons
Uncertainty
Control rods
Void fraction

Data-Driven Coordination of Distributed Energy Resources for Active Power Provision

Xu, H., Dominguez-Garcia, A. D. & Sauer, P. W., Jul 2019, In : IEEE Transactions on Power Systems. 34, 4, p. 3047-3058 12 p., 8642451.

Research output: Contribution to journalArticle

Energy resources
Controllers
Convex optimization
Computer simulation
Costs

Data-driven elasticity imaging using cartesian neural network constitutive models and the autoprogressive method

Hoerig, C., Ghaboussi, J. & Insana, M., May 2019, In : IEEE Transactions on Medical Imaging. 38, 5, p. 1150-1160 11 p., 8522049.

Research output: Contribution to journalArticle

Neural Networks (Computer)
Elasticity
Constitutive models
Neural networks
Imaging techniques

Data integrity threats and countermeasures in railway spot transmission systems

Lim, H. W., Temple, W. G., Tran, B. A. N., Chen, B., Kalbarczyk, Z. & Zhou, J., Oct 2019, In : ACM Transactions on Cyber-Physical Systems. 4, 1, A7.

Research output: Contribution to journalArticle

Data Integrity
Countermeasures
Railway
Attack
Integrity

Data-theoretic methodology and computational platform to quantify organizational factors in socio-technical risk analysis

Pence, J., Sakurahara, T., Zhu, X., Mohaghegh, Z., Ertem, M., Ostroff, C. & Kee, E., May 2019, In : Reliability Engineering and System Safety. 185, p. 240-260 21 p.

Research output: Contribution to journalArticle

Risk analysis
Risk assessment
Reliability analysis
Nuclear power plants
Sensitivity analysis

Dealing with C's Original Sin

Hathhorn, C. & Rosu, G., Sep 1 2019, In : IEEE Software. 36, 5, p. 24-28 5 p., 8802866.

Research output: Contribution to journalArticle

UNIX
Computer operating systems

Debiasing-based noise suppression for ultrafast ultrasound microvessel imaging

Huang, C., Song, P., Gong, P., Trzasko, J. D., Manduca, A. & Chen, S., Aug 2019, In : IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control. 66, 8, p. 1281-1291 11 p., 8720262.

Research output: Contribution to journalArticle

Acoustic noise
Ultrasonics
retarding
Imaging techniques
decomposition

Decentralized model predictive control of urbandrainage systems

Li, Y., Stipanović, D., Voulgaris, P. & Gu, Z., Jan 1 2019, In : WSEAS Transactions on Systems and Control. 14, p. 247-256 10 p.

Research output: Contribution to journalArticle

Model predictive control
Model Predictive Control
Decentralized
Rain
Real time control

Decidable and expressive classes of probabilistic automata

Ben, Y., Chadha, R., Sistla, A. P. & Viswanathan, M., Mar 2019, In : Journal of Computer and System Sciences. 100, p. 70-95 26 p.

Research output: Contribution to journalArticle

Probabilistic Automata
Formal languages
Infinite Words
Regular Languages
Class
Open Access
Helium
Tungsten
titanium carbides
Titanium carbide
Surface morphology

Deep Bayesian neural networks for damage quantification in miter gates of navigation locks

Hoskere, V., Eick, B., Spencer, B. F., Smith, M. D. & Foltz, S. D., Jan 1 2019, (Accepted/In press) In : Structural Health Monitoring.

Research output: Contribution to journalArticle

Navigation
Neural networks
Bearings (structural)
Uncertainty
Fatigue

Deep learning for FTIR histology: leveraging spatial and spectral features with convolutional neural networks

Berisha, S., Lotfollahi, M., Jahanipour, J., Gurcan, I., Walsh, M., Bhargava, R., Van Nguyen, H. & Mayerich, D., Mar 7 2019, In : Analyst. 144, 5, p. 1642-1653 12 p.

Research output: Contribution to journalArticle

Histology
histology
Fourier Analysis
Fourier transform
Fourier transforms

Deep learning for limit order books

Sirignano, J. A., Apr 3 2019, In : Quantitative Finance. 19, 4, p. 549-570 22 p.

Research output: Contribution to journalArticle

Limit order book
Deep learning
Neural networks
Network model
Logistic regression

Defects in Self-Assembled Monolayers on Nanoparticles Prompt Phospholipid Extraction and Bilayer-Curvature-Dependent Deformations

Chong, G., Foreman-Ortiz, I. U., Wu, M., Bautista, A., Murphy, C. J., Pedersen, J. A. & Hernandez, R., Jan 1 2019, In : Journal of Physical Chemistry C.

Research output: Contribution to journalArticle

Phospholipids
Self assembled monolayers
lipids
curvature
Nanoparticles

Defending non-Bayesian learning against adversarial attacks

Su, L. & Vaidya, N. H., Aug 1 2019, In : Distributed Computing. 32, 4, p. 277-289 13 p.

Research output: Contribution to journalArticle

Attack
Rule Learning
Update
Identifiability
Learning

Defluorination of Per- and Polyfluoroalkyl Substances (PFASs) with Hydrated Electrons: Structural Dependence and Implications to PFAS Remediation and Management

Bentel, M. J., Yu, Y., Xu, L., Li, Z. L., Wong, B. M., Men, Y. & Liu, J., Apr 2 2019, In : Environmental Science and Technology. 53, 7, p. 3718-3728 11 p.

Research output: Contribution to journalArticle

Open Access
Remediation
remediation
Chain length
electron
Functional groups

Delay asymptotics and bounds for multitask parallel jobs

Wang, W., Harchol-Balter, M., Jiang, H., Scheller-Wolf, A. & Srikant, R., Apr 15 2019, In : Queueing Systems. 91, 3-4, p. 207-239 33 p.

Research output: Contribution to journalArticle

Bins
Parallel processing systems
Servers
Pyruvate Decarboxylase
Glycerolphosphate Dehydrogenase
Glycerol
Yeast
Saccharomyces cerevisiae

Deletion of JEN1 and ADY2 reduces lactic acid yield from an engineered Saccharomyces cerevisiae, in xylose medium, expressing a heterologous lactate dehydrogenase

Turner, T. L., Lane, S., Jayakody, L. N., Zhang, G. C., Kim, H., Cho, W. & Jin, Y-S., Sep 1 2019, In : FEMS yeast research. 19, 6

Research output: Contribution to journalArticle

Xylose
L-Lactate Dehydrogenase
Saccharomyces cerevisiae
Lactic Acid
Ethanol

Demonstration and Evaluation of Hybrid Microalgae Aqueous Conversion Systems for Biofuel Production

Li, Y., Leow, S., Dong, T., Nagle, N. J., Knoshaug, E. P., Laurens, L. M. L., Pienkos, P. T., Guest, J. S. & Strathmann, T. J., Mar 18 2019, In : ACS Sustainable Chemistry and Engineering. 7, 6, p. 5835-5844 10 p.

Research output: Contribution to journalArticle

Biofuels
biofuel
Demonstrations
Lipids
Liquefaction

Demonstration of the relationship between sensitivity and identifiability for inverse uncertainty quantification

Wu, X., Shirvan, K. & Kozlowski, T., Nov 1 2019, In : Journal of Computational Physics. 396, p. 12-30 19 p.

Research output: Contribution to journalArticle

Uncertainty Quantification
Identifiability
Calibration
Demonstrations
Discrepancy

Denoising of Aligned Genomic Data

Fischer-Hwang, I., Ochoa, I., Weissman, T. & Hernaez, M., Dec 1 2019, In : Scientific reports. 9, 1, 15067.

Research output: Contribution to journalArticle

Open Access
Genome
Boidae
Chromosomes
Datasets

Dependent relevance determination for smooth and structured sparse regression

Wu, A., Koyejo, O. O. & Pillow, J., May 1 2019, In : Journal of Machine Learning Research. 20

Research output: Contribution to journalArticle

Regression
Laplace Approximation
Dependent
Monte Carlo Markov Chain
Convex Relaxation

Deshielding effects on fatigue crack growth in shape memory alloys- A study on CuZnAl single-crystalline materials

Wu, Y., Yaacoub, J., Brenne, F., Abuzaid, W., Canadinc, D. & Sehitoglu, H., Sep 1 2019, In : Acta Materialia. 176, p. 155-166 12 p.

Research output: Contribution to journalArticle

Fatigue crack propagation
Shape memory effect
Crystalline materials
Displacement measurement
Martensite

Design and growth of multi-functional InAsP metamorphic buffers for mid-infrared quantum well lasers on InP

Jung, D., Yu, L., Dev, S., Wasserman, D. & Lee, M. L., Feb 28 2019, In : Journal of Applied Physics. 125, 8, 082537.

Research output: Contribution to journalArticle

quantum well lasers
infrared lasers
buffers
wavelengths
lasers
Plastics
Cracks
Acrylonitrile
Styrene
Butadiene

Design formulas for vibration control of sagged cables using passive MR dampers

Duan, Y., Ni, Y. Q., Zhang, H., Spencer, B. F., Ko, J. M. & Dong, S., Jan 1 2019, In : Smart Structures and Systems. 23, 6, p. 537-551 15 p.

Research output: Contribution to journalArticle

Vibration control
Cables
Damping
Stiffness
Cable stayed bridges

Design formulas for vibration control of taut cables using passive MR dampers

Duan, Y., Ni, Y. Q., Zhang, H., Spencer, B. F., Ko, J. M. & Fang, Y., Jan 1 2019, In : Smart Structures and Systems. 23, 6, p. 521-536 16 p.

Research output: Contribution to journalArticle

Vibration control
Cables
Damping
Stiffness
Modal analysis

Designing and transforming yield-stress fluids

Nelson, A. Z., Schweizer, K. S., Rauzan, B. M., Nuzzo, R. G., Vermant, J. & Ewoldt, R. H., Oct 2019, In : Current Opinion in Solid State and Materials Science. 23, 5, 100758.

Research output: Contribution to journalArticle

Yield stress
Fluids
Functional materials
Materials science
Printing

Designing bioactive porous titanium interfaces to balance mechanical properties and in vitro cells behavior towards increased osseointegration

Civantos, A., Domínguez, C., Pino, R. J., Setti, G., Pavón, J. J., Martínez-Campos, E., Garcia Garcia, F. J., Rodríguez, J. A., Allain, J. P. & Torres, Y., Jun 25 2019, In : Surface and Coatings Technology. 368, p. 162-174 13 p.

Research output: Contribution to journalArticle

activity (biology)
Titanium
Bone
titanium
mechanical properties