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2020

Analysis of biased stochastic gradient descent using sequential semidefinite programs

Hu, B., Seiler, P. & Lessard, L., Jan 1 2020, (Accepted/In press) In : Mathematical Programming.

Research output: Contribution to journalArticle

Analytical convergence regions of accelerated gradient descent in nonconvex optimization under Regularity Condition

Xiong, H., Chi, Y., Hu, B. & Zhang, W., Mar 2020, In : Automatica. 113, 108715.

Research output: Contribution to journalArticle

Analyzing nuclear reactor simulation data and uncertainty with the group method of data handling

Radaideh, M. I. & Kozlowski, T., Feb 2020, In : Nuclear Engineering and Technology. 52, 2, p. 287-295 9 p.

Research output: Contribution to journalArticle

Open Access

A New Biosensor for Stilbenes and a Cannabinoid Enabled by Genome Mining of a Transcriptional Regulator

Sun, H., Zhao, H. & Ang, E. L., Apr 17 2020, In : ACS synthetic biology. 9, 4, p. 698-705 8 p.

Research output: Contribution to journalArticle

A new dynamic wetness index (DWI) predicts soil moisture persistence and correlates with key indicators of surface soil geochemistry

Li, M., Foster, E. J., Le, P. V. V., Yan, Q., Stumpf, A., Hou, T., Papanicolaou, A. N. T., Wacha, K. M., Wilson, C. G., Wang, J., Kumar, P. & Filley, T., Jun 1 2020, In : Geoderma. 368, 114239.

Research output: Contribution to journalArticle

A New Framework for Exploring Process Controls of Flow Duration Curves

Ghotbi, S., Wang, D., Singh, A., Blöschl, G. & Sivapalan, M., Jan 1 2020, In : Water Resources Research. 56, 1, e2019WR026083.

Research output: Contribution to journalArticle

A Newly Synthesized Tris(crown ether) Ionophore for Assisted Ion Transfer at NanoITIES Electrodes

Chen, R., Yang, A., Chang, A., Oweimrin, P. F., Romero, J., Vichitcharoenpaisarn, P., Tapia, S., Ha, K., Villaflor, C. & Shen, M., Feb 17 2020, In : ChemElectroChem. 7, 4, p. 967-974 8 p.

Research output: Contribution to journalArticle

An experimental energy performance investigation and economic analysis on a cascade heat pump for high-temperature water in cold region

Xu, L., Li, E., Xu, Y., Mao, N., Shen, X. & Wang, X., Jun 2020, In : Renewable Energy. 152, p. 674-683 10 p.

Research output: Contribution to journalArticle

An experimental investigation of a dual-fuel engine by using bio-fuel as the additive

Meng, X., Zhou, Y., Yang, T., Long, W., Bi, M., Tian, J. & Lee, C. F. F., Mar 2020, In : Renewable Energy. 147, p. 2238-2249 12 p.

Research output: Contribution to journalArticle

An immersogeometric formulation for free-surface flows with application to marine engineering problems

Zhu, Q., Xu, F., Xu, S., Hsu, M. C. & Yan, J., Apr 1 2020, In : Computer Methods in Applied Mechanics and Engineering. 361, 112748.

Research output: Contribution to journalArticle

An incentive compatible, efficient market for air traffic flow management

Mehta, R. & Vazirani, V. V., May 24 2020, In : Theoretical Computer Science. 818, p. 41-50 10 p.

Research output: Contribution to journalArticle

An innovative multistage anaerobic hythane reactor (MAHR): Metabolic flux, thermodynamics and microbial functions

Si, B., Yang, H., Huang, S., Watson, J., Zhang, Y. & Liu, Z., Feb 1 2020, In : Water Research. 169, 115216.

Research output: Contribution to journalArticle

An in-silico human cell model reveals the influence of spatial organization on RNA splicing

Ghaemi, Z., Peterson, J. R., Gruebele, M. & Luthey-Schulten, Z., Mar 25 2020, In : PLoS computational biology. 16, 3, e1007717.

Research output: Contribution to journalArticle

Open Access

An Integrated Permanent-Magnet-Synchronous Generator-Rectifier Architecture for Limited-Speed-Range Applications

Huynh, P. T., Wang, P. J. & Banerjee, A., May 2020, In : IEEE Transactions on Power Electronics. 35, 5, p. 4767-4779 13 p., 8862851.

Research output: Contribution to journalArticle

An integrated process-based model of flutes and tool marks in deep-water environments: Implications for palaeohydraulics, the Bouma sequence and hybrid event beds

Peakall, J., Best, J., Baas, J. H., Hodgson, D. M., Clare, M. A., Talling, P. J., Dorrell, R. M. & Lee, D. R., Jun 1 2020, In : Sedimentology. 67, 4, p. 1601-1666 66 p.

Research output: Contribution to journalArticle

Open Access

An in vitro mimic of in-cell solvation for protein folding studies

Davis, C. M., Deutsch, J. & Gruebele, M., Apr 2020, In : Protein Science. 29, 4, p. 1060-1068 9 p.

Research output: Contribution to journalArticle

Anisotropic analysis of fibrous and woven materials part 1: Estimation of local orientation

Semeraro, F., Ferguson, J. C., Panerai, F., King, R. J. & Mansour, N. N., Jun 1 2020, In : Computational Materials Science. 178, 109631.

Research output: Contribution to journalArticle

Anisotropic mineralized collagen scaffolds accelerate osteogenic response in a glycosaminoglycan-dependent fashion

Dewey, M. J., Nosatov, A. V., Subedi, K. & Harley, B., Apr 21 2020, In : RSC Advances. 10, 26, p. 15629-15641 13 p.

Research output: Contribution to journalArticle

Open Access

An optical investigation of substitution rates on natural gas/diesel dual-fuel combustion in a diesel engine

Lee, C. F., Pang, Y., Wu, H., Nithyanandan, K. & Liu, F., Mar 1 2020, In : Applied Energy. 261, 114455.

Research output: Contribution to journalArticle

An unsupervised learning approach to identify novel signatures of health and disease from multimodal data

Shomorony, I., Cirulli, E. T., Huang, L., Napier, L. A., Heister, R. R., Hicks, M., Cohen, I. V., Yu, H. C., Swisher, C. L., Schenker-Ahmed, N. M., Li, W., Nelson, K. E., Brar, P., Kahn, A. M., Spector, T. D., Caskey, C. T., Venter, J. C., Karow, D. S., Kirkness, E. F. & Shah, N., Jan 10 2020, In : Genome medicine. 12, 1, 7.

Research output: Contribution to journalArticle

Open Access

A partial-dithering strategy for edge-illumination X-ray phase-contrast tomography enabled by a joint reconstruction method

Chen, Y., Hagen, C. K., Olivo, A. & Anastasio, M. A., May 21 2020, In : Physics in medicine and biology. 65, 10, 105007.

Research output: Contribution to journalArticle

A partial evaluation framework for order-sorted equational programs modulo axioms

Alpuente, M., Cuenca-Ortega, A., Escobar, S. & Meseguer, J., Jan 2020, In : Journal of Logical and Algebraic Methods in Programming. 110, 100501.

Research output: Contribution to journalArticle

Open Access

A Pathway for Degradation of Uracil to Acetyl Coenzyme A in Bacillus megaterium

Zhu, D., Wei, Y., Yin, J., Liu, D., Ang, E. L., Zhao, H. & Zhang, Y., Mar 18 2020, In : Applied and environmental microbiology. 86, 7

Research output: Contribution to journalArticle

A photo-regulated aptamer sensor for spatiotemporally controlled monitoring of ATP in the mitochondria of living cells

Hong, S., Zhang, X., Lake, R. J., Pawel, G. T., Guo, Z., Pei, R. & Lu, Y., Jan 1 2020, In : Chemical Science. 11, 3, p. 713-720 8 p.

Research output: Contribution to journalArticle

Open Access

A Physics-Based Compact Model for Ultrathin Black Phosphorus FETs - Part I: Effect of Contacts, Temperature, Ambipolarity, and Traps

Yarmoghaddam, E., Haratipour, N., Koester, S. J. & Rakheja, S., Jan 2020, In : IEEE Transactions on Electron Devices. 67, 1, p. 389-396 8 p., 8920102.

Research output: Contribution to journalArticle

A Physics-Based Compact Model for Ultrathin Black Phosphorus FETs-Part II: Model Validation against Numerical and Experimental Data

Yarmoghaddam, E., Haratipour, N., Koester, S. J. & Rakheja, S., Jan 2020, In : IEEE Transactions on Electron Devices. 67, 1, p. 397-405 9 p., 8936555.

Research output: Contribution to journalArticle

A polarization reconfigurable microstrip patch antenna using liquid metal microfluidics

Griffin, A. S., Pan, H., Barrera, J. D., Huff, G. H., White, S. R. & Sottos, N. R., Mar 16 2020, In : Smart Materials and Structures. 29, 4, 045032.

Research output: Contribution to journalArticle

A possible application of catastrophe theory to boiling water reactor instability

Pázsit, I., Dykin, V., Konno, H. & Kozlowski, T., Jan 2020, In : Progress in Nuclear Energy. 118, 103054.

Research output: Contribution to journalArticle

Application of deep neural networks for high-dimensional large BWR core neutronics

Abu Saleem, R., Radaideh, M. I. & Kozlowski, T., Jan 1 2020, (Accepted/In press) In : Nuclear Engineering and Technology.

Research output: Contribution to journalArticle

Open Access

Approximation algorithms for scheduling C-benevolent jobs on weighted machines

Yu, G. & Jacobson, S. H., Apr 2 2020, In : IISE Transactions. 52, 4, p. 432-443 12 p.

Research output: Contribution to journalArticle

Archimedean lattices emerge in template-directed eutectic solidification

Kulkarni, A. A., Hanson, E., Zhang, R., Thornton, K. & Braun, P. V., Jan 16 2020, In : Nature. 577, 7790, p. 355-358 4 p.

Research output: Contribution to journalArticle

Open Access

A Redundant Unit to Form T-Type Three-Level Inverters Tolerant of IGBT Open-Circuit Faults in Multiple Legs

Wang, B., Li, Z., Bai, Z., Krein, P. T. & Ma, H., Jan 2020, In : IEEE Transactions on Power Electronics. 35, 1, p. 924-939 16 p., 8693980.

Research output: Contribution to journalArticle

Artificial water channels enable fast and selective water permeation through water-wire networks

Song, W., Joshi, H., Chowdhury, R., Najem, J. S., Shen, Y. X., Lang, C., Henderson, C. B., Tu, Y. M., Farell, M., Pitz, M. E., Maranas, C. D., Cremer, P. S., Hickey, R. J., Sarles, S. A., Hou, J. L., Aksimentiev, A. & Kumar, M., Jan 1 2020, In : Nature Nanotechnology. 15, 1, p. 73-79 7 p.

Research output: Contribution to journalArticle

A Self-Consistent Open Boundary Condition for Fully Kinetic Plasma Thruster Plume Simulations

Jambunathan, R. & Levin, D. A., Mar 2020, In : IEEE Transactions on Plasma Science. 48, 3, p. 610-630 21 p., 8986756.

Research output: Contribution to journalArticle

A Simplified Approach to Analyze Complementary Sensitivity Tradeoffs in Continuous-Time and Discrete-Time Systems

Wan, N., Li, D. & Hovakimyan, N., Apr 2020, In : IEEE Transactions on Automatic Control. 65, 4, p. 1697-1703 7 p., 8793137.

Research output: Contribution to journalArticle

A Sparse Latent Class Model for Cognitive Diagnosis

Chen, Y., Culpepper, S. & Liang, F., Mar 1 2020, In : Psychometrika. 85, 1, p. 121-153 33 p.

Research output: Contribution to journalArticle

Assessing and mitigating impact of time delay attack: Case studies for power grid controls

Lou, X., Tran, C., Tan, R., Yau, D. K. Y., Kalbarczyk, Z. T., Banerjee, A. K. & Ganesh, P., Jan 2020, In : IEEE Journal on Selected Areas in Communications. 38, 1, p. 141-155 15 p., 8892729.

Research output: Contribution to journalArticle

Assessing the Effect of Middle Ear Effusions on Wideband Acoustic Immittance Using Optical Coherence Tomography

Won, J., Monroy, G. L., Huang, P. C., Hill, M. C., Novak, M. A., Porter, R. G., Spillman, D. R., Chaney, E. J., Barkalifa, R. & Boppart, S. A., Jul 1 2020, In : Ear and hearing. p. 811-824 14 p.

Research output: Contribution to journalArticle

Assessing the feasibility and stability of uracil base flipping in RNA–small molecule complexes using molecular dynamics simulations

Hagler, L. D., Bonson, S. E., Kocheril, P. A. & Zimmerman, S. C., Jan 1 2020, In : Canadian Journal of Chemistry. 98, 6, p. 261-269 9 p.

Research output: Contribution to journalArticle

Assessing the severity of psoriasis through multivariate analysis of optical images from non-lesional skin

Žurauskas, M., Barkalifa, R., Alex, A., Marjanovic, M., Spillman, D. R., Mukherjee, P., Neitzel, C. D., Lee, W., Medler, J., Arp, Z., Cleveland, M., Hood, S. & Boppart, S. A., Dec 1 2020, In : Scientific reports. 10, 1, 9154.

Research output: Contribution to journalArticle

Open Access

Assessing the transition effects in a drinking water distribution system caused by changing supply water quality: an indirect approach by characterizing suspended solids

Chen, L., Ling, F., Bakker, G., Liu, W. T., Medema, G., van der Meer, W. & Liu, G., Jan 1 2020, In : Water Research. 168, 115159.

Research output: Contribution to journalArticle

Open Access

Assessment of Climate, Sizing, and Location Controls on Green Infrastructure Efficacy: A Timescale Framework

Hung, F., Harman, C. J., Hobbs, B. F. & Sivapalan, M., May 1 2020, In : Water Resources Research. 56, 5, e2019WR026141.

Research output: Contribution to journalArticle

Assessment of hepatic steatosis in nonalcoholic fatty liver disease by using quantitative US

Han, A., Zhang, Y. N., Boehringer, A. S., Montes, V., Andre, M. P., Erdman, J. W., Loomba, R., Valasek, M. A., Sirlin, C. B. & O’Brien, W. D., Jan 1 2020, In : Radiology. 295, 1, p. 106-113 8 p.

Research output: Contribution to journalArticle

Assessment of microbial risks by characterization of Escherichia coli presence to analyze the public health risks from poor water quality in Nepal

Uprety, S., Dangol, B., Nakarmi, P., Dhakal, I., Sherchan, S. P., Shisler, J. L., Jutla, A., Amarasiri, M., Sano, D. & Nguyen, T. H., May 2020, In : International Journal of Hygiene and Environmental Health. 226, 113484.

Research output: Contribution to journalArticle

Assignment of energy loss contributions in redox flow batteries using exergy destruction analysis

Nemani, V. P. & Smith, K. C., Jan 31 2020, In : Journal of Power Sources. 447, 227371.

Research output: Contribution to journalArticle

A Stable Generalized/eXtended p-hierarchical FEM for three-dimensional linear elastic fracture mechanics

Sanchez-Rivadeneira, A. G., Shauer, N., Mazurowski, B. & Duarte, C. A., Jun 1 2020, In : Computer Methods in Applied Mechanics and Engineering. 364, 112970.

Research output: Contribution to journalArticle

A Stochastic Green's Function for Solution of Wave Propagation in Wave-Chaotic Environments

Lin, S., Peng, Z. & Antonsen, T. M., May 2020, In : IEEE Transactions on Antennas and Propagation. 68, 5, p. 3919-3933 15 p., 8952896.

Research output: Contribution to journalArticle