Research Output

2020

All-digital histopathology by infrared-optical hybrid microscopy

Schnell, M., Mittal, S., Falahkheirkhah, K., Mittal, A., Yeh, K., Kenkel, S., Kajdacsy-Balla, A., Carney, P. S. & Bhargava, R., Feb 18 2020, In : Proceedings of the National Academy of Sciences of the United States of America. 117, 7, p. 3388-3396 9 p., 201912400.

Research output: Contribution to journalArticle

Alluvial architecture of mid-channel fluvial–tidal barforms: The mesotidal Lower Columbia River, Oregon/Washington, USA

Prokocki, E. W., Best, J. L., Ashworth, P. J., Sambrook Smith, G. H., Nicholas, A. P., Parsons, D. R. & Simpson, C. J., 2020, (Accepted/In press) In : Sedimentology.

Research output: Contribution to journalArticle

Almost Lyapunov functions for nonlinear systems

Liu, S., Liberzon, D. & Zharnitsky, V., Mar 2020, In : Automatica. 113, 108758.

Research output: Contribution to journalArticle

Open Access

Aloe: Verifying reliability of approximate programs in the presence of recovery mechanisms

Joshi, K., Fernando, V. & Misailovic, S., Feb 22 2020, CGO 2020 - Proceedings of the 18th ACM/IEEE International Symposium on Code Generation and Optimization. Mars, J., Tang, L., Xue, J. & Wu, P. (eds.). Association for Computing Machinery, Inc, p. 56-67 12 p. (CGO 2020 - Proceedings of the 18th ACM/IEEE International Symposium on Code Generation and Optimization).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access

A Low-Noise Frequency Synthesizer Using Multiphase Generation and Combining Techniques

Khashaba, A., Elkholy, A., Megawer, K. M., Ahmed, M. G. & Hanumolu, P. K., Mar 2020, In : IEEE Journal of Solid-State Circuits. 55, 3, p. 592-601 10 p., 8903272.

Research output: Contribution to journalArticle

Altered Hippocampal Epigenetic Regulation Underlying Reduced Cognitive Development in Response to Early Life Environmental Insults

Schachtschneider, K. M., Welge, M. E., Auvil, L., Chaki, S., Rund, L. A., Madsen, O., Elmore, M. R. P., Johnson, R. W., Groenen, M. A. M. & Schook, L. B., Feb 4 2020, In : Genes. 11, 2, 162.

Research output: Contribution to journalArticle

Open Access

A mass balance approach to urban water analysis using multi-resolution data

Hastie, A. G., Chini, C. M. & Stillwell, A. S., Jan 1 2020, (Accepted/In press) In : Journal of Industrial Ecology.

Research output: Contribution to journalArticle

A mass spectrometry-based high-throughput screening method for engineering fatty acid synthases with improved production of medium-chain fatty acids

Xue, P., Si, T., Mishra, S., Zhang, L., Choe, K., Sweedler, J. V. & Zhao, H., Jul 1 2020, In : Biotechnology and bioengineering. 117, 7, p. 2131-2138 8 p.

Research output: Contribution to journalArticle

A method for evaluating CRCP performance based on edge-loaded FWD test

Zhang, Y., Roesler, J. R. & Huang, Z., Apr 1 2020, In : Materials and Structures/Materiaux et Constructions. 53, 2, 46.

Research output: Contribution to journalArticle

Amplitude and decay of long-period coda of great earthquakes

Xia, H., Song, X., Weaver, R. & Li, J., Sep 2020, In : Physics of the Earth and Planetary Interiors. 306, 106538.

Research output: Contribution to journalArticle

A multilevel sampled-data approach for resilient navigation and control of autonomous systems

Jafarnejadsani, H., Wan, N., Hovakimyan, N. & Voulgaris, P. G., Feb 1 2020, In : International Journal of Robust and Nonlinear Control. 30, 3, p. 1071-1097 27 p.

Research output: Contribution to journalArticle

A Multi-Organ Nucleus Segmentation Challenge

Kumar, N., Verma, R., Anand, D., Zhou, Y., Onder, O. F., Tsougenis, E., Chen, H., Heng, P. A., Li, J., Hu, Z., Wang, Y., Koohbanani, N. A., Jahanifar, M., Tajeddin, N. Z., Gooya, A., Rajpoot, N., Ren, X., Zhou, S., Wang, Q., Shen, D. & 67 others, Yang, C. K., Weng, C. H., Yu, W. H., Yeh, C. Y., Yang, S., Xu, S., Yeung, P. H., Sun, P., Mahbod, A., Schaefer, G., Ellinger, I., Ecker, R., Smedby, O., Wang, C., Chidester, B., Ton, T. V., Tran, M. T., Ma, J., Do, M. N., Graham, S., Vu, Q. D., Kwak, J. T., Gunda, A., Chunduri, R., Hu, C., Zhou, X., Lotfi, D., Safdari, R., Kascenas, A., O'Neil, A., Eschweiler, D., Stegmaier, J., Cui, Y., Yin, B., Chen, K., Tian, X., Gruening, P., Barth, E., Arbel, E., Remer, I., Ben-Dor, A., Sirazitdinova, E., Kohl, M., Braunewell, S., Li, Y., Xie, X., Shen, L., Ma, J., Baksi, K. D., Khan, M. A., Choo, J., Colomer, A., Naranjo, V., Pei, L., Iftekharuddin, K. M., Roy, K., Bhattacharjee, D., Pedraza, A., Bueno, M. G., Devanathan, S., Radhakrishnan, S., Koduganty, P., Wu, Z., Cai, G., Liu, X., Wang, Y. & Sethi, A., May 2020, In : IEEE transactions on medical imaging. 39, 5, p. 1380-1391 12 p., 8880654.

Research output: Contribution to journalArticle

An Activity-Based Sensing Approach for the Detection of Cyclooxygenase-2 in Live Cells

Yadav, A. K., Reinhardt, C. J., Arango, A. S., Huff, H. C., Dong, L., Malkowski, M. G., Das, A., Tajkhorshid, E. & Chan, J., Feb 17 2020, In : Angewandte Chemie - International Edition. 59, 8, p. 3307-3314 8 p.

Research output: Contribution to journalArticle

Analysis, Estimation, and Validation of Discrete-Time Epidemic Processes

Pare, P. E., Liu, J., Beck, C. L., Kirwan, B. E. & Basar, T., Jan 2020, In : IEEE Transactions on Control Systems Technology. 28, 1, p. 79-93 15 p., 8488684.

Research output: Contribution to journalArticle

Analysis of biased stochastic gradient descent using sequential semidefinite programs

Hu, B., Seiler, P. & Lessard, L., Jan 1 2020, (Accepted/In press) In : Mathematical Programming.

Research output: Contribution to journalArticle

Analysis of the Spray Numerical Injection Modeling for Gasoline Applications

Nocivelli, L., Sforzo, B. A., Tekawade, A., Yan, J., Powell, C. F., Chang, W., Lee, C. F. & Som, S., Apr 14 2020, In : SAE Technical Papers. 2020-April, April

Research output: Contribution to journalConference article

Analytical convergence regions of accelerated gradient descent in nonconvex optimization under Regularity Condition

Xiong, H., Chi, Y., Hu, B. & Zhang, W., Mar 2020, In : Automatica. 113, 108715.

Research output: Contribution to journalArticle

Analyzing nuclear reactor simulation data and uncertainty with the group method of data handling

Radaideh, M. I. & Kozlowski, T., Feb 2020, In : Nuclear Engineering and Technology. 52, 2, p. 287-295 9 p.

Research output: Contribution to journalArticle

Open Access

An Analysis of Phishing Emails and How the Human Vulnerabilities are Exploited

Sharma, T. & Bashir, M., 2020, Advances in Human Factors in Cybersecurity - AHFE 2020 Virtual Conference on Human Factors in Cybersecurity. Corradini, I., Nardelli, E. & Ahram, T. (eds.). Springer, p. 49-55 7 p. (Advances in Intelligent Systems and Computing; vol. 1219 AISC).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An attentive fine-grained entity typing model with latent type representation

Lin, Y. & Ji, H., Jan 1 2020, EMNLP-IJCNLP 2019 - 2019 Conference on Empirical Methods in Natural Language Processing and 9th International Joint Conference on Natural Language Processing, Proceedings of the Conference. Association for Computational Linguistics, p. 6197-6202 6 p. (EMNLP-IJCNLP 2019 - 2019 Conference on Empirical Methods in Natural Language Processing and 9th International Joint Conference on Natural Language Processing, Proceedings of the Conference).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Anchor box optimization for object detection

Zhong, Y., Wang, J., Peng, J. & Zhang, L., Mar 2020, Proceedings - 2020 IEEE Winter Conference on Applications of Computer Vision, WACV 2020. Institute of Electrical and Electronics Engineers Inc., p. 1275-1283 9 p. 9093498. (Proceedings - 2020 IEEE Winter Conference on Applications of Computer Vision, WACV 2020).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A New Biosensor for Stilbenes and a Cannabinoid Enabled by Genome Mining of a Transcriptional Regulator

Sun, H., Zhao, H. & Ang, E. L., Apr 17 2020, In : ACS synthetic biology. 9, 4, p. 698-705 8 p.

Research output: Contribution to journalArticle

A new dynamic wetness index (DWI) predicts soil moisture persistence and correlates with key indicators of surface soil geochemistry

Li, M., Foster, E. J., Le, P. V. V., Yan, Q., Stumpf, A., Hou, T., Papanicolaou, A. N. T., Wacha, K. M., Wilson, C. G., Wang, J., Kumar, P. & Filley, T., Jun 1 2020, In : Geoderma. 368, 114239.

Research output: Contribution to journalArticle

A New Framework for Exploring Process Controls of Flow Duration Curves

Ghotbi, S., Wang, D., Singh, A., Blöschl, G. & Sivapalan, M., Jan 1 2020, In : Water Resources Research. 56, 1, e2019WR026083.

Research output: Contribution to journalArticle

A Newly Synthesized Tris(crown ether) Ionophore for Assisted Ion Transfer at NanoITIES Electrodes

Chen, R., Yang, A., Chang, A., Oweimrin, P. F., Romero, J., Vichitcharoenpaisarn, P., Tapia, S., Ha, K., Villaflor, C. & Shen, M., Feb 17 2020, In : ChemElectroChem. 7, 4, p. 967-974 8 p.

Research output: Contribution to journalArticle

An experimental energy performance investigation and economic analysis on a cascade heat pump for high-temperature water in cold region

Xu, L., Li, E., Xu, Y., Mao, N., Shen, X. & Wang, X., Jun 2020, In : Renewable Energy. 152, p. 674-683 10 p.

Research output: Contribution to journalArticle

An experimental investigation of a dual-fuel engine by using bio-fuel as the additive

Meng, X., Zhou, Y., Yang, T., Long, W., Bi, M., Tian, J. & Lee, C. F. F., Mar 2020, In : Renewable Energy. 147, p. 2238-2249 12 p.

Research output: Contribution to journalArticle

Angiogenic biomaterials to promote therapeutic regeneration and investigate disease progression

Ngo, M. T. & Harley, B. A. C., Oct 2020, In : Biomaterials. 255, 120207.

Research output: Contribution to journalReview article

An immersogeometric formulation for free-surface flows with application to marine engineering problems

Zhu, Q., Xu, F., Xu, S., Hsu, M. C. & Yan, J., Apr 1 2020, In : Computer Methods in Applied Mechanics and Engineering. 361, 112748.

Research output: Contribution to journalArticle

An incentive compatible, efficient market for air traffic flow management

Mehta, R. & Vazirani, V. V., May 24 2020, In : Theoretical Computer Science. 818, p. 41-50 10 p.

Research output: Contribution to journalArticle

An innovative multistage anaerobic hythane reactor (MAHR): Metabolic flux, thermodynamics and microbial functions

Si, B., Yang, H., Huang, S., Watson, J., Zhang, Y. & Liu, Z., Feb 1 2020, In : Water Research. 169, 115216.

Research output: Contribution to journalArticle

An in-silico human cell model reveals the influence of spatial organization on RNA splicing

Ghaemi, Z., Peterson, J. R., Gruebele, M. & Luthey-Schulten, Z., Mar 25 2020, In : PLoS computational biology. 16, 3, e1007717.

Research output: Contribution to journalArticle

Open Access

An Integrated Permanent-Magnet-Synchronous Generator-Rectifier Architecture for Limited-Speed-Range Applications

Huynh, P. T., Wang, P. J. & Banerjee, A., May 2020, In : IEEE Transactions on Power Electronics. 35, 5, p. 4767-4779 13 p., 8862851.

Research output: Contribution to journalArticle

An integrated process-based model of flutes and tool marks in deep-water environments: Implications for palaeohydraulics, the Bouma sequence and hybrid event beds

Peakall, J., Best, J., Baas, J. H., Hodgson, D. M., Clare, M. A., Talling, P. J., Dorrell, R. M. & Lee, D. R., Jun 1 2020, In : Sedimentology. 67, 4, p. 1601-1666 66 p.

Research output: Contribution to journalArticle

Open Access

An Interpretable Predictive Model for Early Detection of Hardware Failure

Balakir, A., Yang, A. & Rosenbaum, E., Apr 2020, 2020 IEEE International Reliability Physics Symposium, IRPS 2020 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 9129615. (IEEE International Reliability Physics Symposium Proceedings; vol. 2020-April).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An in vitro mimic of in-cell solvation for protein folding studies

Davis, C. M., Deutsch, J. & Gruebele, M., Apr 2020, In : Protein Science. 29, 4, p. 1060-1068 9 p.

Research output: Contribution to journalArticle

Anisotropic analysis of fibrous and woven materials part 1: Estimation of local orientation

Semeraro, F., Ferguson, J. C., Panerai, F., King, R. J. & Mansour, N. N., Jun 1 2020, In : Computational Materials Science. 178, 109631.

Research output: Contribution to journalArticle

Anisotropic mineralized collagen scaffolds accelerate osteogenic response in a glycosaminoglycan-dependent fashion

Dewey, M. J., Nosatov, A. V., Subedi, K. & Harley, B., Apr 21 2020, In : RSC Advances. 10, 26, p. 15629-15641 13 p.

Research output: Contribution to journalArticle

Open Access

Announcing the Shape Memory and Superelasticity 2019 Editor’s Choice Selections

Sehitoglu, H., Jan 1 2020, (Accepted/In press) In : Shape Memory and Superelasticity.

Research output: Contribution to journalEditorial

Anomaly detection in traffic surveillance videos with GAN-based future frame prediction

Nguyen, K. T., Dinh, D. T., Do, M. N. & Tran, M. T., Jun 8 2020, ICMR 2020 - Proceedings of the 2020 International Conference on Multimedia Retrieval. Association for Computing Machinery, Inc, p. 457-463 7 p. (ICMR 2020 - Proceedings of the 2020 International Conference on Multimedia Retrieval).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An optical investigation of substitution rates on natural gas/diesel dual-fuel combustion in a diesel engine

Lee, C. F., Pang, Y., Wu, H., Nithyanandan, K. & Liu, F., Mar 1 2020, In : Applied Energy. 261, 114455.

Research output: Contribution to journalArticle

ANOVA derivative-based sensitivity with applications to a plasma-combustion system

Tang, K. & Freund, J. B., Jan 1 2020, Proceedings of the 6th European Conference on Computational Mechanics: Solids, Structures and Coupled Problems, ECCM 2018 and 7th European Conference on Computational Fluid Dynamics, ECFD 2018. Owen, R., de Borst, R., Reese, J. & Pearce, C. (eds.). International Centre for Numerical Methods in Engineering, CIMNE, p. 4123-4134 12 p. (Proceedings of the 6th European Conference on Computational Mechanics: Solids, Structures and Coupled Problems, ECCM 2018 and 7th European Conference on Computational Fluid Dynamics, ECFD 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Antioxidant Therapies in Traumatic Brain Injury

Pietro, V. D., Yakoub, K. M., Caruso, G., Lazzarino, G., Signoretti, S., Barbey, A. K., Tavazzi, B., Lazzarino, G., Belli, A. & Amorini, A. M., Mar 22 2020, In : Antioxidants. 9, 3, 260.

Research output: Contribution to journalReview article

Open Access