Research Output

Filter
Review article
2020

The influence of rising tropospheric carbon dioxide and ozone on plant productivity

Ainsworth, E. A., Lemonnier, P. & Wedow, J. M., Jan 1 2020, In : Plant Biology. 22, S1, p. 5-11 7 p.

Research output: Contribution to journalReview article

Open Access

The role of cis-elements in the evolution of crassulacean acid metabolism photosynthesis

Chen, L. Y., Xin, Y., Wai, C. M., Liu, J. & Ming, R., Dec 1 2020, In : Horticulture Research. 7, 1, 5.

Research output: Contribution to journalReview article

Open Access

Towards a multiscale crop modelling framework for climate change adaptation assessment

Peng, B., Guan, K., Tang, J., Ainsworth, E. A., Asseng, S., Bernacchi, C. J., Cooper, M., Delucia, E. H., Elliott, J. W., Ewert, F., Grant, R. F., Gustafson, D. I., Hammer, G. L., Jin, Z., Jones, J. W., Kimm, H., Lawrence, D. M., Li, Y., Lombardozzi, D. L., Marshall-Colon, A. & 7 others, Messina, C. D., Ort, D. R., Schnable, J. C., Vallejos, C. E., Wu, A., Yin, X. & Zhou, W., Apr 2020, In : Nature Plants. 6, 4, p. 338-348 11 p.

Research output: Contribution to journalReview article

2019

Carbon assimilation in crops at high temperatures

Slattery, R. A. & Ort, D. R., Oct 1 2019, In : Plant Cell and Environment. 42, 10, p. 2750-2758 9 p.

Research output: Contribution to journalReview article

Open Access

Emergence of Hierarchical Modularity in Evolving Networks Uncovered by Phylogenomic Analysis

Caetano-Anollés, G., Aziz, M. F., Mughal, F., Gräter, F., Koç, I., Caetano-Anollés, K. & Caetano-Anollés, D., Jan 1 2019, In : Evolutionary Bioinformatics. 15

Research output: Contribution to journalReview article

Open Access

Fire blight disease, a fast-approaching threat to apple and pear production in China

ZHAO, Y. Q., TIAN, Y. L., WANG, L. M., GENG, G. M., ZHAO, W. J., HU, B. S. & ZHAO, Y. F., Apr 2019, In : Journal of Integrative Agriculture. 18, 4, p. 815-820 6 p.

Research output: Contribution to journalReview article

Open Access

Genetic strategies for improving crop yields

Bailey-Serres, J., Parker, J. E., Ainsworth, E. A., Oldroyd, G. E. D. & Schroeder, J. I., Nov 7 2019, In : Nature. 575, 7781, p. 109-118 10 p.

Research output: Contribution to journalReview article

Open Access

Germplasm Development of Underutilized Temperate U.S. Tree Crops

Revord, R., Lovell, S. T., Molnar, T., Wolz, K. J. & Mattia, C., Mar 14 2019, In : Sustainability. 11, 6, 20 p., 1546.

Research output: Contribution to journalReview article

Open Access

Perspective: Understanding the Intersection of Climate/Environmental Change, Health, Agriculture, and Improved Nutrition - A Case Study: Type 2 Diabetes

Finley, J., Jaacks, L. M., Peters, C. J., Ort, D. R., Aimone, A. M., Conrad, Z. & Raiten, D. J., Sep 1 2019, In : Advances in Nutrition. 10, 5, p. 731-738 8 p.

Research output: Contribution to journalReview article

Open Access

Prospects for economical natural colorants: insights from maize

Chatham, L. A., Paulsmeyer, M. & Juvik, J. A., Nov 1 2019, In : Theoretical and Applied Genetics. 132, 11, p. 2927-2946 20 p.

Research output: Contribution to journalReview article

Safer food through plant science: Reducing toxic element accumulation in crops

Clemens, S. & Ort, D., Oct 24 2019, In : Journal of experimental botany. 70, 20, p. 5537-5557 21 p.

Research output: Contribution to journalReview article

Water Use Efficiency as a Constraint and Target for Improving the Resilience and Productivity of C 3 and C 4 Crops

Leakey, A. D. B., Ferguson, J. N., Pignon, C. P., Wu, A., Jin, Z., Hammer, G. L. & Lobell, D. B., Apr 2019, In : Annual Review of Plant Biology. 70, p. 781-808 28 p.

Research output: Contribution to journalReview article

2018

Above- and Belowground Prairie Cordgrass Response to Applied Nitrogen on Marginal Land

Hernández, K. A., Owens, V. N., Boe, A., González-Hernández, J. L., Lee, D. & Aberle, E., Jun 1 2018, In : Bioenergy Research. 11, 2, p. 440-448 9 p.

Research output: Contribution to journalReview article

An ecological perspective on managing weeds during the great selection for herbicide resistance

Bagavathiannan, M. V. & Davis, A. S., Oct 2018, In : Pest Management Science. 74, 10, p. 2277-2286 10 p.

Research output: Contribution to journalReview article

Archaea-First and the Co-Evolutionary Diversification of Domains of Life

Staley, J. T. & Caetano-Anollés, G., Aug 2018, In : BioEssays. 40, 8, 1800036.

Research output: Contribution to journalReview article

Consensus, uncertainties and challenges for perennial bioenergy crops and land use

Whitaker, J., Field, J. L., Bernacchi, C. J., Cerri, C. E. P., Ceulemans, R., Davies, C. A., DeLucia, E. H., Donnison, I. S., McCalmont, J. P., Paustian, K., Rowe, R. L., Smith, P., Thornley, P. & McNamara, N. P., Mar 2018, In : GCB Bioenergy. 10, 3, p. 150-164 15 p.

Research output: Contribution to journalReview article

Evolution of macromolecular structure: a 'double tale' of biological accretion and diversification

Caetano-Anollés, D., Caetano-Anollés, K. & Caetano-Anollés, G., Oct 1 2018, In : Science progress. 101, 4, p. 360-383 24 p.

Research output: Contribution to journalReview article

Integration of sudden death syndrome resistance loci in the soybean genome

Chang, H. X., Roth, M. G., Wang, D., Cianzio, S. R., Lightfoot, D. A., Hartman, G. L. & Chilvers, M. I., Apr 1 2018, In : Theoretical and Applied Genetics. 131, 4, p. 757-773 17 p.

Research output: Contribution to journalReview article

Opportunities and challenges for harvest weed seed control in global cropping systems

Walsh, M. J., Broster, J. C., Schwartz-Lazaro, L. M., Norsworthy, J. K., Davis, A. S., Tidemann, B. D., Beckie, H. J., Lyon, D. J., Soni, N., Neve, P. & Bagavathiannan, M. V., Oct 2018, In : Pest Management Science. 74, 10, p. 2235-2245 11 p.

Research output: Contribution to journalReview article

Optimizing photorespiration for improved crop productivity

South, P. F., Cavanagh, A. P., Lopez-Calcagno, P. E., Raines, C. A. & Ort, D. R., Dec 2018, In : Journal of Integrative Plant Biology. 60, 12, p. 1217-1230 14 p.

Research output: Contribution to journalReview article

Optimizing RNA-seq studies to investigate herbicide resistance

Giacomini, D. A., Gaines, T., Beffa, R. & Tranel, P. J., Oct 2018, In : Pest Management Science. 74, 10, p. 2260-2264 5 p.

Research output: Contribution to journalReview article

Origins and structure of chloroplastic and mitochondrial plant protoporphyrinogen oxidases: implications for the evolution of herbicide resistance

Dayan, F. E., Barker, A. & Tranel, P. J., Oct 2018, In : Pest Management Science. 74, 10, p. 2226-2234 9 p.

Research output: Contribution to journalReview article

Phloem function: a key to understanding and manipulating plant responses to rising atmospheric [CO2]?

Ainsworth, E. A. & Lemonnier, P., Jun 2018, In : Current opinion in plant biology. 43, p. 50-56 7 p.

Research output: Contribution to journalReview article

Priorities for wheat intensification in the Eastern Indo-Gangetic Plains

Park, A., Davis, A. & McDonald, A., Jun 2018, In : Global Food Security. 17, p. 1-8 8 p.

Research output: Contribution to journalReview article

Reviewing research priorities in weed ecology, evolution and management: a horizon scan

Neve, P., Barney, J. N., Buckley, Y., Cousens, R. D., Graham, S., Jordan, N. R., Lawton-Rauh, A., Liebman, M., Mesgaran, M. B., Schut, M., Shaw, J., Storkey, J., Baraibar, B., Baucom, R. S., Chalak, M., Childs, D. Z., Christensen, S., Eizenberg, H., Fernández-Quintanilla, C., French, K. & 15 others, Harsch, M., Heijting, S., Harrison, L., Loddo, D., Macel, M., Maczey, N., Merotto, A., Mortensen, D., Necajeva, J., Peltzer, D. A., Recasens, J., Renton, M., Riemens, M., Sønderskov, M. & Williams, M., Aug 2018, In : Weed Research. 58, 4, p. 250-258 9 p.

Research output: Contribution to journalReview article

Revisiting paradigms of Ca2+ signaling protein kinase regulation in plants

Bender, K. W., Zielinski, R. E. & Huber, S. C., Jan 15 2018, In : Biochemical Journal. 475, 1, p. 207-223 17 p.

Research output: Contribution to journalReview article

Rooting Phylogenies and the Tree of Life While Minimizing Ad Hoc and Auxiliary Assumptions

Caetano-Anollés, G., Nasir, A., Kim, K. M. & Caetano-Anollés, D., Oct 1 2018, In : Evolutionary Bioinformatics. 14

Research output: Contribution to journalReview article

Strengths and limitations of Nitrogen rate recommendations for corn and opportunities for improvement

Morris, T. F., Murrell, T. S., Beegle, D. B., Camberato, J. J., Ferguson, R. B., Grove, J., Ketterings, Q., Kyveryga, P. M., Laboski, C. A. M., McGrath, J. M., Meisinger, J. J., Melkonian, J., Moebius-Clune, B. N., Nafziger, E. D., Osmond, D., Sawyer, J. E., Scharf, P. C., Smith, W., Spargo, J. T., Van Es, H. M. & 1 others, Yang, H., Jan 1 2018, In : Agronomy Journal. 110, 1, p. 1-37 37 p.

Research output: Contribution to journalReview article

Temperate agroforestry research: considering multifunctional woody polycultures and the design of long-term field trials

Lovell, S. T., Dupraz, C., Gold, M., Jose, S., Revord, R., Stanek, E. & Wolz, K. J., Oct 1 2018, In : Agroforestry Systems. 92, 5, p. 1397-1415 19 p.

Research output: Contribution to journalReview article

2017

Are herbicides a once in a century method of weed control?

Davis, A. S. & Frisvold, G. B., Nov 2017, In : Pest Management Science. 73, 11, p. 2209-2220 12 p.

Research output: Contribution to journalReview article

CHO cell cytotoxicity and genotoxicity analyses of disinfection by-products: An updated review

Wagner, E. D. & Plewa, M. J., Aug 2017, In : Journal of environmental sciences (China). 58, p. 64-76 13 p.

Research output: Contribution to journalReview article

Comparison of organic and integrated nutrient management strategies for reducing soil N2O emissions

Graham, R. F., Wortman, S. E. & Pittelkow, C. M., Mar 28 2017, In : Sustainability (Switzerland). 9, 4, 510.

Research output: Contribution to journalReview article

First-season crop yield response to organic soil amendments: A meta-analysis

Wortman, S. E., Holmes, A. A., Miernicki, E., Knoche, K. & Pittelkow, C. M., Jan 1 2017, In : Agronomy Journal. 109, 4, p. 1210-1217 8 p.

Research output: Contribution to journalReview article

Long-term evolution of viruses: A Janus-faced balance

Nasir, A., Kim, K. M. & Caetano-Anollés, G., Aug 2017, In : BioEssays. 39, 8, 1700026.

Research output: Contribution to journalReview article

Mimivirus: Leading the way in the discovery of giant viruses of amoebae

Colson, P., La Scola, B., Levasseur, A., Caetano-Anollés, G. & Raoult, D., Mar 13 2017, In : Nature Reviews Microbiology. 15, 4, p. 243-254 12 p.

Research output: Contribution to journalReview article

Phenotypic plasticity and remodeling in the stress-induced Caenorhabditis elegans dauer

Androwski, R. J., Flatt, K. M. & Schroeder, N. E., Sep 1 2017, In : Wiley Interdisciplinary Reviews: Developmental Biology. 6, 5, e278.

Research output: Contribution to journalReview article

Potential of global croplands and bioenergy crops for climate change mitigation through deployment for enhanced weathering

Kantola, I. B., Masters, M. D., Beerling, D. J., Long, S. P. & DeLucia, E. H., Apr 1 2017, In : Biology Letters. 13, 4, 0714.

Research output: Contribution to journalReview article

Proso millet (Panicum miliaceum L.) and its potential for cultivation in the Pacific Northwest, U.S. A review

Habiyaremye, C., Matanguihan, J. B., D’Alpoim Guedes, J., Ganjyal, G. M., Whiteman, M. R., Kidwell, K. K. & Murphy, K. M., Jan 9 2017, In : Frontiers in Plant Science. 7, 1961.

Research output: Contribution to journalReview article

Robust spatial frameworks for leveraging research on sustainable crop intensification

Grassini, P., Pittelkow, C. M., Cassman, K. G., Yang, H. S., Archontoulis, S., Licht, M., Lamkey, K. R., Ciampitti, I. A., Coulter, J. A., Brouder, S. M., Volenec, J. J. & Guindin-Garcia, N., Sep 2017, In : Global Food Security. 14, p. 18-22 5 p.

Research output: Contribution to journalReview article

Rooting for cassava: insights into photosynthesis and associated physiology as a route to improve yield potential

De Souza, A. P., Massenburg, L. N., Jaiswal, D., Cheng, S., Shekar, R. & Long, S. P., Jan 1 2017, In : New Phytologist. 213, 1, p. 50-65 16 p.

Research output: Contribution to journalReview article

Switchgrass as a bioenergy crop in the Loess Plateau, China: Potential lignocellulosic feedstock production and environmental conservation

Cooney, D., Kim, H., Quinn, L., Lee, M. S., Guo, J., CHEN, S. L., XU, B. C. & Lee, D. K., Jun 2017, In : Journal of Integrative Agriculture. 16, 6, p. 1211-1226 16 p.

Research output: Contribution to journalReview article

2016

2,4-D Past, Present, and Future: A Review

Peterson, M. A., McMaster, S. A., Riechers, D. E., Skelton, J. & Stahlman, P. W., Apr 1 2016, In : Weed Technology. 30, 2, p. 303-345 43 p.

Research output: Contribution to journalReview article

Arguments Reinforcing the Three-Domain View of Diversified Cellular Life

Nasir, A., Kim, K. M., Da Cunha, V. & Caetano-Anollés, G., Jan 1 2016, In : Archaea. 2016, 1851865.

Research output: Contribution to journalReview article

Effects from early planting of late-maturing sunflowers on damage from primary insect pests in the United States

Prasifka, J. R., Marek, L. F., Lee, D. K., Thapa, S. B., Hahn, V. & Bradshaw, J. D., Jul 2016, In : Helia. 39, 64, p. 45-56 12 p.

Research output: Contribution to journalReview article

Has photosynthetic capacity increased with 80years of soybean breeding? An examination of historical soybean cultivars

Koester, R. P., Nohl, B. M., Diers, B. W. & Ainsworth, E., May 1 2016, In : Plant Cell and Environment. 39, 5, p. 1058-1067 10 p.

Research output: Contribution to journalReview article

Limitations and potential of spectral subtractions in Fourier-transform infrared spectroscopy of soil samples

Margenot, A. J., Calderón, F. J. & Parikh, S. J., Jan 1 2016, In : Soil Science Society of America Journal. 80, 1, p. 10-26 17 p.

Research output: Contribution to journalReview article

Manipulating photorespiration to increase plant productivity: Recent advances and perspectives for crop improvement

Betti, M., Bauwe, H., Busch, F. A., Fernie, A. R., Keech, O., Levey, M., Ort, D. R., Parry, M. A. J., Sage, R., Timm, S., Walker, B. & Weber, A. P. M., May 1 2016, In : Journal of experimental botany. 67, 10, p. 2977-2988 12 p.

Research output: Contribution to journalReview article

Meta-analysis approach to assess effect of tillage on microbial biomass and enzyme activities

Zuber, S. M. & Villamil, M. B., Jun 1 2016, In : Soil Biology and Biochemistry. 97, p. 176-187 12 p.

Research output: Contribution to journalReview article

Organically grown soybean production in the USA: Constraints and management of pathogens and insect pests

Hartman, G. L., Pawlowski, M. L., Herman, T. K. & Eastburn, D., Jan 1 2016, In : Agronomy. 6, 1, 16.

Research output: Contribution to journalReview article