Research Output

Filter
Article
2017

Target-Site Resistances to ALS and PPO Inhibitors Are Linked in Waterhemp (Amaranthus tuberculatus)

Tranel, P. J., Wu, C. & Sadeque, A., Jan 2017, In : Weed Science. 65, 1, p. 4-8 5 p.

Research output: Contribution to journalArticle

Tassel deformation in corn following early-season defoliation

Thomison, P. R., Lindsey, A. J., Geyer, A. B., Nafziger, E. D., Coulter, J. A. & Zarnstorff, M. E., Jan 1 2017, In : Crop, Forage and Turfgrass Management. 3, 1, p. 1-3 3 p.

Research output: Contribution to journalArticle

Temporal and spatial transcriptomic and microRNA dynamics of CAM photosynthesis in pineapple

Wai, C. M., VanBuren, R., Zhang, J., Huang, L., Miao, W., Edger, P. P., Yim, W. C., Priest, H. D., Meyers, B. C., Mockler, T., Smith, J. A. C., Cushman, J. C. & Ming, R., Oct 2017, In : Plant Journal. 92, 1, p. 19-30 12 p.

Research output: Contribution to journalArticle

The crystal structure of Erwinia amylovora AmyR, a member of the YbjN protein family, shows similarity to type III secretion chaperones but suggests different cellular functions

Bartho, J. D., Bellini, D., Wuerges, J., Demitri, N., Toccafondi, M., Schmitt, A. O., Zhao, Y., Walsh, M. A. & Benini, S., Apr 2017, In : PloS one. 12, 4, e0176049.

Research output: Contribution to journalArticle

The effect of artificial selection on phenotypic plasticity in maize

Gage, J. L., Jarquin, D., Romay, C., Lorenz, A., Buckler, E. S., Kaeppler, S., Alkhalifah, N., Bohn, M., Campbell, D. A., Edwards, J., Ertl, D., Flint-Garcia, S., Gardiner, J., Good, B., Hirsch, C. N., Holland, J., Hooker, D. C., Knoll, J., Kolkman, J., Kruger, G. & 20 others, Lauter, N., Lawrence-Dill, C. J., Lee, E., Lynch, J., Murray, S. C., Nelson, R., Petzoldt, J., Rocheford, T., Schnable, J., Schnable, P. S., Scully, B., Smith, M., Springer, N. M., Srinivasan, S., Walton, R., Weldekidan, T., Wisser, R. J., Xu, W., Yu, J. & De Leon, N., Dec 1 2017, In : Nature communications. 8, 1, 1348.

Research output: Contribution to journalArticle

The impact of iodinated X-ray contrast agents on formation and toxicity of disinfection by-products in drinking water

Jeong, C. H., Machek, E. J., Shakeri, M., Duirk, S. E., Ternes, T. A., Richardson, S. D., Wagner, E. D. & Plewa, M. J., Aug 2017, In : Journal of Environmental Sciences. 58, p. 173-182 10 p.

Research output: Contribution to journalArticle

The impact of water management practices on subtropical pasture methane emissions and ecosystem service payments

Chamberlain, S. D., Groffman, P. M., Boughton, E. H., Gomez-Casanovas, N., DeLucia, E. H., Bernacchi, C. J. & Sparks, J. P., Jun 2017, In : Ecological Applications. 27, 4, p. 1199-1209 11 p.

Research output: Contribution to journalArticle

The Kalanchoë genome provides insights into convergent evolution and building blocks of crassulacean acid metabolism

Yang, X., Hu, R., Yin, H., Jenkins, J., Shu, S., Tang, H., Liu, D., Weighill, D. A., Cheol Yim, W., Ha, J., Heyduk, K., Goodstein, D. M., Guo, H. B., Moseley, R. C., Fitzek, E., Jawdy, S., Zhang, Z., Xie, M., Hartwell, J., Grimwood, J. & 29 others, Abraham, P. E., Mewalal, R., Beltrán, J. D., Boxall, S. F., Dever, L. V., Palla, K. J., Albion, R., Garcia, T., Mayer, J. A., Don Lim, S., Man Wai, C., Peluso, P., Van Buren, R., De Paoli, H. C., Borland, A. M., Guo, H., Chen, J. G., Muchero, W., Yin, Y., Jacobson, D. A., Tschaplinski, T. J., Hettich, R. L., Ming, R., Winter, K., Leebens-Mack, J. H., Smith, J. A. C., Cushman, J. C., Schmutz, J. & Tuskan, G. A., Dec 1 2017, In : Nature communications. 8, 1, 1899.

Research output: Contribution to journalArticle

The natural history of molecular functions inferred from an extensive phylogenomic analysis of gene ontology data

Koc, I. & Caetano-Anolles, G., May 2017, In : PloS one. 12, 5, e0176129.

Research output: Contribution to journalArticle

The pomegranate (Punica granatum L.) genome and the genomics of punicalagin biosynthesis

Qin, G., Xu, C., Ming, R., Tang, H., Guyot, R., Kramer, E. M., Hu, Y., Yi, X., Qi, Y., Xu, X., Gao, Z., Pan, H., Jian, J., Tian, Y., Yue, Z. & Xu, Y., Sep 2017, In : Plant Journal. 91, 6, p. 1108-1128 21 p.

Research output: Contribution to journalArticle

TIC-Tox: A preliminary discussion on identifying the forcing agents of DBP-mediated toxicity of disinfected water

Plewa, M. J., Wagner, E. D. & Richardson, S. D., Aug 2017, In : Journal of Environmental Sciences. 58, p. 208-216 9 p.

Research output: Contribution to journalArticle

Tile drainage nitrate losses and corn yield response to fall and spring nitrogen management

Pittelkow, C. M., Clover, M. W., Hoeft, R. G., Nafziger, E. D., Warren, J. J., Gonzini, L. C. & Greer, K. D., Sep 1 2017, In : Journal of Environmental Quality. 46, 5, p. 1057-1064 8 p.

Research output: Contribution to journalArticle

Tillage and cover cropping effects on soil properties and crop production in Illinois

Dozier, I. A., Behnke, G. D., Davis, A. S., Nafziger, E. D. & Villamil, M. B., Jan 1 2017, In : Agronomy Journal. 109, 4, p. 1261-1270 10 p.

Research output: Contribution to journalArticle

Time dependent genetic analysis links field and controlled environment phenotypes in the model C4grass Setaria

Feldman, M. J., Paul, R. E., Banan, D., Barrett, J. F., Sebastian, J., Yee, M. C., Jiang, H., Lipka, A. E., Brutnell, T. P., Dinneny, J. R., Leakey, A. D. B. & Baxter, I., 2017, In : PLoS genetics. 13, 6, e1006841.

Research output: Contribution to journalArticle

Toxicity of Wastewater with Elevated Bromide and Iodide after Chlorination, Chloramination, or Ozonation Disinfection

Dong, S., Masalha, N., Plewa, M. J. & Nguyen, T. H., Aug 15 2017, In : Environmental Science and Technology. 51, 16, p. 9297-9304 8 p.

Research output: Contribution to journalArticle

Transcriptome dynamics of Camellia sinensis in response to continuous salinity and drought stress

Zhang, Q., Cai, M., Yu, X., Wang, L., Guo, C., Ming, R. & Zhang, J., Aug 1 2017, In : Tree Genetics and Genomes. 13, 4, 78.

Research output: Contribution to journalArticle

Two new PPX2 mutations associated with resistance to PPO-inhibiting herbicides in Amaranthus palmeri

Giacomini, D. A., Umphres, A. M., Nie, H., Mueller, T. C., Steckel, L. E., Young, B. G., Scott, R. C. & Tranel, P. J., Aug 2017, In : Pest Management Science. 73, 8, p. 1559-1563 5 p.

Research output: Contribution to journalArticle

Type VI secretion systems of Erwinia amylovora contribute to bacterial competition, virulence, and exopolysaccharide production

Tian, Y., Zhao, Y., Shi, L., Cui, Z., Hu, B. & Zhao, Y., Jun 2017, In : Phytopathology. 107, 6, p. 654-661 8 p.

Research output: Contribution to journalArticle

Tyrosine-610 in the receptor kinase BAK1 does not play a major role in brassinosteroid signaling or innate immunity

Singh, V., Perraki, A., Kim, S. Y., Shrivastava, S., Lee, J. H., Zhao, Y., Schwessinger, B., Oh, M. H., Marshall-Colon, A., Zipfel, C. & Huber, S. C., Aug 2 2017, In : Frontiers in Plant Science. 8, 1273.

Research output: Contribution to journalArticle

Uncertainty in measurements of the photorespiratory CO2 compensation point and its impact on models of leaf photosynthesis

Walker, B. J., Orr, D. J., Carmo-Silva, E., Parry, M. A. J., Bernacchi, C. J. & Ort, D. R., Jun 1 2017, In : Photosynthesis research. 132, 3, p. 245-255 11 p.

Research output: Contribution to journalArticle

Understanding and improving global crop response to ozone pollution

Ainsworth, E. A., Jun 2017, In : Plant Journal. 90, 5, p. 886-897 12 p.

Research output: Contribution to journalArticle

Virulence diversity of Phakopsora pachyrhizi isolates from East Africa compared to a geographically diverse collection

Murithi, H. M., Haudenshield, J. S., Beed, F., Mahuku, G., Joosten, M. H. A. J. & Hartman, G. L., Jul 2017, In : Plant disease. 101, 7, p. 1194-1200 7 p.

Research output: Contribution to journalArticle

Weed diversity affects soybean and maize yield in a long term experiment in Michigan, USA

Ferrero, R., Lima, M., Davis, A. S. & Gonzalez-Andujar, J. L., Feb 24 2017, In : Frontiers in Plant Science. 8, 236.

Research output: Contribution to journalArticle

Yield drag associated with the soybean aphid resistance gene Rag2 from PI 200538

Ward, R. A., Kim, K. S. & Diers, B. W., Nov 1 2017, In : Crop Science. 57, 6, p. 3035-3042 8 p.

Research output: Contribution to journalArticle

2016

A consensus map in cultivated hexaploid oat reveals conserved grass synteny with substantial subgenome rearrangement

Chaffin, A. S., Huang, Y. F., Smith, S., Bekele, W. A., Babiker, E., Gnanesh, B. N., Foresman, B. J., Blanchard, S. G., Jay, J. J., Reid, R. W., Wight, C. P., Chao, S., Oliver, R., Islamovic, E., Kolb, F. L., McCartney, C., Mitchell Fetch, J. W., Beattie, A. D., Bjørnstad, Å., Michael Bonman, J. & 11 others, Langdon, T., Howarth, C. J., Brouwer, C. R., Jellen, E. N., Klos, K. E., Poland, J. A., Hsieh, T. F., Brown, R., Jackson, E., Schlueter, J. A. & Tinker, N. A., Jul 2016, In : Plant Genome. 9, 2

Research output: Contribution to journalArticle

A Dynamic Model for the Evolution of Protein Structure

Tal, G., Boca, S. M., Mittenthal, J. & Caetano-Anollés, G., May 1 2016, In : Journal of Molecular Evolution. 82, 4-5, p. 230-243 14 p.

Research output: Contribution to journalArticle

A gene for genetic background in Zea mays: Fine-mapping enhancer of teosinte branched1.2 to a yabby class transcription factor

Yang, C. J., Kursel, L. E., Studer, A. J., Bartlett, M. E., Whipple, C. J. & Doebley, J. F., Dec 2016, In : Genetics. 204, 4, p. 1573-1585 13 p.

Research output: Contribution to journalArticle

Agroforestry-The next step in sustainable and resilient agriculture

Wilson, M. H. & Lovell, S. T., Jun 18 2016, In : Sustainability (Switzerland). 8, 6, 574.

Research output: Contribution to journalArticle

Alternatives to Atrazine for Weed Management in Processing Sweet Corn

Arslan, Z. F., Williams, M. M., Becker, R., Fritz, V. A., Peachey, R. E. & Rabaey, T. L., Jul 1 2016, In : Weed Science. 64, 3, p. 531-539 9 p.

Research output: Contribution to journalArticle

Analysis of Alternative Splicing Landscape in Pineapple (Ananas comosus)

Wai, C. M., Powell, B., Ming, R. & Min, X. J., Sep 1 2016, In : Tropical Plant Biology. 9, 3, p. 150-160 11 p.

Research output: Contribution to journalArticle

An efficient method for measuring copy number variation applied to improvement of nematode resistance in soybean

Lee, T. G., Diers, B. W. & Hudson, M. E., Oct 1 2016, In : Plant Journal. 88, 1, p. 143-153 11 p.

Research output: Contribution to journalArticle

An evaluation of new and established methods to determine T-DNA copy number and homozygosity in transgenic plants

Głowacka, K., Kromdijk, J., Leonelli, L., Niyogi, K. K., Clemente, T. E. & Long, S. P., Apr 1 2016, In : Plant Cell and Environment. 39, 4, p. 908-917 10 p.

Research output: Contribution to journalArticle

An improved approach for measuring the impact of multiple CO2 conductances on the apparent photorespiratory CO2 compensation point through slope-intercept regression

Walker, B. J., Skabelund, D. C., Busch, F. A. & Ort, D. R., Jun 1 2016, In : Plant Cell and Environment. 39, 6, p. 1198-1203 6 p.

Research output: Contribution to journalArticle

A novel high-throughput multi-parameter flow cytometry based method for monitoring and rapid characterization of microbiome dynamics in anaerobic systems

Dhoble, A. S., Bekal, S., Dolatowski, W., Yanz, C., Lambert, K. N. & Bhalerao, K. D., Nov 1 2016, In : Bioresource Technology. 220, p. 566-571 6 p.

Research output: Contribution to journalArticle

Antibiotics and antibiotic resistance in agroecosystems: State of the science

Williams-Nguyen, J., Brett Sallach, J., Bartelt-Hunt, S., Boxall, A. B., Durso, L. M., McLain, J. E., Singer, R. S., Snow, D. D. & Zilles, J. L., Jan 1 2016, In : Journal of Environmental Quality. 45, 2, p. 394-406 13 p.

Research output: Contribution to journalArticle

A remorin gene is implicated in quantitative disease resistance in maize

Jamann, T. M., Luo, X., Morales, L., Kolkman, J. M., Chung, C. L. & Nelson, R. J., Mar 1 2016, In : Theoretical and Applied Genetics. 129, 3, p. 591-602 12 p.

Research output: Contribution to journalArticle

Assessment and synthesis of 50 years of published drainage phosphorus losses

Christianson, L. E., Harmel, R. D., Smith, D., Williams, M. R. & King, K., Jan 1 2016, In : Journal of Environmental Quality. 45, 5, p. 1467-1477 11 p.

Research output: Contribution to journalArticle

Assessment of common soybean-infecting viruses in Ohio, USA, through multi-site sampling and high-throughput sequencing

Han, J., Domier, L. L., Cassone, B. J., Dorrance, A. & Qu, F., Jan 1 2016, In : Plant Health Progress. 17, 2, p. 133-140 8 p.

Research output: Contribution to journalArticle

Assessment of drainage nitrogen losses on a yield-scaled basis

Zhao, X., Christianson, L. E., Harmel, D. & Pittelkow, C. M., Dec 1 2016, In : Field Crops Research. 199, p. 156-166 11 p.

Research output: Contribution to journalArticle

Association of green stem disorder with agronomic traits in soybean

Harbach, C., Chawla, S., Bowen, C. R., Hill, C. B., Nafziger, E. D. & Hartman, G. L., Nov 1 2016, In : Agronomy Journal. 108, 6, p. 2263-2268 6 p.

Research output: Contribution to journalArticle

Balancing selection contributed to domestication of autopolyploid sugarcane (Saccharum officinarum L.)

Arro, J., Park, J. W., Wai, C. M., VanBuren, R., Pan, Y. B., Nagai, C., da Silva, J. & Ming, R. R., May 1 2016, In : Euphytica. 209, 2, p. 477-493 17 p.

Research output: Contribution to journalArticle

Being smart is not enough to ensure success: Integrating personal development into a general education course

Whitehall, A. P., Hill, L. G., Yost, D. M. & Kidwell, K. K., Jan 1 2016, In : Journal of General Education. 65, 3-4, p. 241-263 23 p.

Research output: Contribution to journalArticle

Biodegradable plastic and fabric mulch performance in field and high tunnel cucumber production

Wortman, S. E., Kadoma, I. & Crandall, M. D., Apr 2016, In : HortTechnology. 26, 2, p. 148-155 8 p.

Research output: Contribution to journalArticle

Open Access

Bioenergy yields of several cropping systems in the U.S. corn belt

Nafziger, E. D., Villamil, M. B., Niekamp, J., Iutzi, F. W. & Davis, V. M., Mar 1 2016, In : Agronomy Journal. 108, 2, p. 559-565 7 p.

Research output: Contribution to journalArticle

Biomass feedstock preprocessing and long-distance transportation logistics

Lin, T., Rodríguez, L. F., Davis, S., Khanna, M., Shastri, Y., Grift, T., Long, S. & Ting, K. C., Jan 1 2016, In : GCB Bioenergy. 8, 1, p. 160-170 11 p.

Research output: Contribution to journalArticle

Can chilling tolerance of C4 photosynthesis in Miscanthus be transferred to sugarcane?

Glowacka, K., Ahmed, A., Sharma, S., Abbott, T., Comstock, J. C., Long, S. P. & Sacks, E. J., Mar 1 2016, In : GCB Bioenergy. 8, 2, p. 407-418 12 p.

Research output: Contribution to journalArticle

Can crop simulation models be used to predict local to regional maize yields and total production in the U.S. Corn Belt?

Morell, F. J., Yang, H. S., Cassman, K. G., Wart, J. V., Elmore, R. W., Licht, M., Coulter, J. A., Ciampitti, I. A., Pittelkow, C. M., Brouder, S. M., Thomison, P., Lauer, J., Graham, C., Massey, R. & Grassini, P., Jun 1 2016, In : Field Crops Research. 192, p. 1-12 12 p.

Research output: Contribution to journalArticle