Research Output 1975 2020

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Transcription Factor-MicroRNA-Target Gene Networks Associated with Ovarian Cancer Survival and Recurrence

Delfino, K. R. & Rodriguez-Zas, S. L., Mar 12 2013, In : PloS one. 8, 3, e58608.

Research output: Contribution to journalArticle

ovarian neoplasms
Gene Regulatory Networks
MicroRNAs
microRNA
Ovarian Neoplasms
Cotyledon
Seedlings
Soybeans
Transcription Factors
Genes

Transcription profiling of soybean nodulation by Bradyrhizobium japonicum

Brechenmacher, L., Kim, M. Y., Benitez, M., Li, M., Joshi, T., Calla, B., Mei, P. L., Libault, M., Vodkin, L. O., Xu, D., Lee, S. H., Clough, S. J. & Stacey, G., May 1 2008, In : Molecular Plant-Microbe Interactions. 21, 5, p. 631-645 15 p.

Research output: Contribution to journalArticle

Bradyrhizobium
Nitrogen Fixation
Bradyrhizobium japonicum
nodulation
Soybeans

Transcriptome analyses suggest a disturbance of iron homeostasis in soybean leaves during white mould disease establishment

Calla, B., Blahut-Beatty, L., Koziol, L., Simmonds, D. H. & Clough, S. J., Aug 2014, In : Molecular Plant Pathology. 15, 6, p. 576-588 13 p.

Research output: Contribution to journalArticle

Oxalic Acid
oxalic acid
homeostasis
Gene Expression Profiling
Soybeans

Transcriptome analysis of resistant and susceptible genotypes of Glycine tomentella during Phakopsora pachyrhizi infection reveals novel rust resistance genes

Soria-Guerra, R. E., Rosales-Mendoza, S., Chang, S., Haudenshield, J. S., Padmanaban, A., Rodriguez-Zas, S. L., Hartman, G. L., Ghabrial, S. A. & Korban, S. S., May 1 2010, In : Theoretical and Applied Genetics. 120, 7, p. 1315-1333 19 p.

Research output: Contribution to journalArticle

Glycine tomentella
Phakopsora pachyrhizi
Gene Expression Profiling
transcriptomics
Glycine

Transcriptome analysis of Spartina pectinata in response to freezing stress

Nah, G., Lee, M., Kim, D. S., Rayburn, A. L., Voigt, T. & Lee, D. K., Mar 1 2016, In : PloS one. 11, 3, e0152294.

Research output: Contribution to journalArticle

Spartina pectinata
Gene Expression Profiling
transcriptomics
Freezing
freezing
Glucosinolates
Metabolome
Brassica
Gene Expression Profiling
larvae

Transcriptome changes in the phenylpropanoid pathway of Glycine max in response to Pseudomonas syringae infection

Zabala, G., Zou, J., Tuteja, J., Gonzalez, D. O., Clough, S. J. & Vodkin, L. O., Nov 3 2006, In : BMC Plant Biology. 6, 26.

Research output: Contribution to journalArticle

Pseudomonas syringae
Pseudomonas Infections
phenylpropanoids
Transcriptome
Soybeans

Transcriptome dynamics of Camellia sinensis in response to continuous salinity and drought stress

Zhang, Q., Cai, M., Yu, X., Wang, L., Guo, C., Ming, R. & Zhang, J., Aug 1 2017, In : Tree Genetics and Genomes. 13, 4, 78.

Research output: Contribution to journalArticle

Camellia sinensis
Droughts
drought stress
Salinity
Transcriptome
Open Access
grain sorghum
transcriptomics
herbicides
grain crops
glutathione transferase

Transcriptome profiling revealed stress-induced and disease resistance genes up-regulated in PRSV resistant transgenic papaya

Fang, J., Lin, A., Qiu, W., Cai, H., Umar, M., Chen, R. & Ming, R., Jun 16 2016, In : Frontiers in Plant Science. 7, JUNE2016, 855.

Research output: Contribution to journalArticle

Papaya ringspot virus
induced resistance
papayas
transcriptomics
disease resistance

Transcriptome response to glyphosate in sensitive and resistant soybean

Zhu, J., Patzoldt, W. L., Shealy, R. T., Vodkin, L. O., Clough, S. J. & Tranel, P. J., Aug 13 2008, In : Journal of Agricultural and Food Chemistry. 56, 15, p. 6355-6363 9 p.

Research output: Contribution to journalArticle

glyphosate
Transcriptome
Soybeans
transcriptome
soybeans

Transcriptomic analysis of transgressive segregants revealed the central role of photosynthetic capacity and efficiency in biomass accumulation in sugarcane

Singh, R., Jones, T., Wai, C. M., Jifon, J., Nagai, C., Ming, R. & Yu, Q., Dec 1 2018, In : Scientific reports. 8, 1, 4415.

Research output: Contribution to journalArticle

transcriptomics
sugarcane
biomass production
biomass
energy

Transcriptomic profiling of central nervous system regions in three species of honey bee during dance communication behavior

Sen Sarma, M., Rodriguez-Zas, S. L., Hong, F., Zhong, S. & Robinson, G. E., Jul 29 2009, In : PloS one. 4, 7, e6408.

Research output: Contribution to journalArticle

bee dances
Honey
Bees
Neurology
transcriptomics

Transcriptomics comparison between porcine adipose and bone marrow mesenchymal stem cells during in vitro osteogenic and adipogenic differentiation

Monaco, E., Bionaz, M., Rodriguez-Zas, S., Hurley, W. L. & Wheeler, M. B., Mar 7 2012, In : PloS one. 7, 3, e32481.

Research output: Contribution to journalArticle

bone marrow cells
Stem cells
Mesenchymal Stromal Cells
transcriptomics
stem cells

Transcript profiling reveals expression differences in wild-type and glabrous soybean lines

Hunt, M., Kaur, N., Stromvik, M. & Vodkin, L. O., Oct 26 2011, In : BMC Plant Biology. 11, 145.

Research output: Contribution to journalArticle

soybeans
isogenic lines
trichomes
genes
gene expression

Transfection of Sclerotinia sclerotiorum with in vitro transcripts of a naturally occurring interspecific recombinant of Sclerotinia sclerotiorum hypovirus 2 significantly reduces virulence of the fungus

Marzano, S. Y. L., Hobbs, H. A., Nelson, B. D., Hartman, G. L., Eastburn, D. M., McCoppin, N. K. & Domier, L. L., Jan 1 2015, In : Journal of virology. 89, 9, p. 5060-5071 12 p.

Research output: Contribution to journalArticle

Hypovirus
Ascomycota
Sclerotinia sclerotiorum
transfection
Transfection

Transferase activity function and system development process are critical in cattle embryo development

Adams, H. A., Southey, B. R., Everts, R. E., Marjani, S. L., Tian, C. X., Lewin, H. A. & Rodriguez-Zas, S. L., Mar 1 2011, In : Functional and Integrative Genomics. 11, 1, p. 139-150 12 p.

Research output: Contribution to journalArticle

Transferases
Embryonic Development
Reproductive Techniques
Embryonic Structures
Genes

Transfer RNA and the origins of diversified life

Sun, F. J. & Caetano-Anolles, G., Oct 21 2008, In : Science Progress. 91, 3, p. 265-284 20 p.

Research output: Contribution to journalArticle

Transfer RNA
Archaea
Codon
Selenocysteine
Viruses

Transformation of iopamidol during chlorination

Wendel, F. M., Lütke Eversloh, C., Machek, E. J., Duirk, S. E., Plewa, M. J., Richardson, S. D. & Ternes, T. A., Nov 4 2014, In : Environmental Science and Technology. 48, 21, p. 12689-12697 9 p.

Research output: Contribution to journalArticle

Iopamidol
Chlorination
chlorination
disinfection
chlorine

Transformation of Soybean Embryogénie cultures by microprojectile bombardment

Cho, M. J., Vodkin, L. O. & Widholm, J. M., Jan 1 1997, In : Plant Biotechnology. 14, 1, p. 11-16 6 p.

Research output: Contribution to journalArticle

hygromycin-B kinase
Soybeans
soybeans
Embryonic Development
embryogenesis

Transgenic corn rootworm protection enhances uptake and post-flowering mineral nutrient accumulation

Bender, R. R., Haegele, J. W., Ruffo, M. L. & Below, F. E., Jan 1 2013, In : Agronomy Journal. 105, 6, p. 1626-1634 9 p.

Research output: Contribution to journalArticle

rootworms
transgenic insects
genetically modified organisms
minerals
flowering

Transgenic corn rootworm protection increases grain yield and nitrogen use of maize

Haegele, J. W. & Below, F. E., Mar 1 2013, In : Crop Science. 53, 2, p. 585-594 10 p.

Research output: Contribution to journalArticle

rootworms
Bacillus thuringiensis
grain yield
genetically modified organisms
corn

Transient overexpression of the Miscanthus sinensis glucose-6-phosphate isomerase gene (MsGPI) in Nicotiana benthamiana enhances expression of genes related to antioxidant metabolism

Seong, E. S., Yoo, J. H., Lee, J. G., Kim, H. Y., Hwang, I. S., Heo, K., Lim, J. D., Lee, D. K., Sacks, E. J. & Yu, C. Y., Sep 1 2013, In : Plant OMICS. 6, 6, p. 408-414 7 p.

Research output: Contribution to journalArticle

glucose-6-phosphate isomerase
Miscanthus sinensis
Nicotiana benthamiana
antioxidants
gene expression

Transmission of herbicide resistance from a monoecious to a dioecious weedy Amaranthus species

Tranel, P. J., Wassom, J. J., Jeschke, M. R. & Rayburn, A. L., Dec 1 2002, In : Theoretical and Applied Genetics. 105, 5, p. 674-679 6 p.

Research output: Contribution to journalArticle

Herbicide Resistance
Amaranthus
herbicide resistance
Acetolactate Synthase
Herbicides

Transmission of Switchgrass mosaic virus by Graminella aureovittata

Agindotan, B. O., Prasifka, J. R., Gray, M., Dietrich, C. H. & Bradley, C., Aug 2 2013, In : Canadian Journal of Plant Pathology. 35, 3, p. 384-389 6 p.

Research output: Contribution to journalArticle

Graminella
Panicum virgatum
viruses
Marafivirus
Cicadellidae

Transport properties of bean vesicles in the presence of fungal components

Griffiths, H. M., Briskin, D. P. & Anderson, A. J., Dec 23 1986, In : Phytochemistry. 26, 1, p. 21-24 4 p.

Research output: Contribution to journalArticle

Great Northern beans
Fungal Structures
Colletotrichum
Colletotrichum lindemuthianum
Hypocotyl
transposons
inheritance (genetics)
RNA
gene expression
dominance (genetics)

Tree of Sex: A database of sexual systems

Ashman, T. L., Bachtrog, D., Blackmon, H., Goldberg, E. E., Hahn, M. W., Kirkpatrick, M., Kitano, J., Mank, J. E., Mayrose, I., Ming, R., Otto, S. P., Peichel, C. L., Pennell, M. W., Perrin, N., Ross, L., Valenzuela, N. & Vamosi, J. C., Jun 24 2014, In : Scientific Data. 1, 140015.

Research output: Contribution to journalArticle

Chromosomes
Fish
Animals
Testing
Chromosome

Trends in genetic diversity among European maize cultivars and their parental components during the past 50 years

Reif, J. C., Hamrit, S., Heckenberger, M., Schipprack, W., Maurer, H. P., Bohn, M. & Melchinger, A. E., Sep 1 2005, In : Theoretical and Applied Genetics. 111, 5, p. 838-845 8 p.

Research output: Contribution to journalArticle

Zea mays
genetic variation
corn
Central European region
Linkage Disequilibrium

Triazine resistance in Amaranthus tuberculatus (Moq) sauer that is not site-of-action mediated

Patzoldt, W. L., Dixon, B. S. & Tranel, P. J., Oct 1 2003, In : Pest Management Science. 59, 10, p. 1134-1142 9 p.

Research output: Contribution to journalArticle

Amaranthus tuberculatus
triazines
atrazine
Tuberculatus
pyridate

Tribromopyrrole, brominated acids, and other disinfection byproducts produced by disinfection of drinking water rich in bromide

Richardson, S. D., Thruston, A. D., Rav-Acha, C., Groisman, L., Popilevsky, I., Juraev, O., Glezer, V., McKAgue, A. B., Plewa, M. J. & Wagner, E. D., Sep 1 2003, In : Environmental Science and Technology. 37, 17, p. 3782-3793 12 p.

Research output: Contribution to journalArticle

Disinfection
Bromides
bromide
Drinking Water
disinfection

Trichothecene-producing fusarium species isolated from soybean roots in Ethiopia and Ghana and their pathogenicity on soybean

Hartman, G. L., McCormick, S. P. & O’donnell, K., Aug 2019, In : Plant disease. 103, 8, p. 2070-2075 6 p.

Research output: Contribution to journalArticle

trichothecenes
Ghana
Ethiopia
Fusarium
pathogenicity

Trinexapac-ethyl affects kentucky bluegrass root architecture

Beasley, J. S., Branham, B. E. & Ortiz-Ribbing, L. M., Aug 1 2005, In : HortScience. 40, 5, p. 1539-1542 4 p.

Research output: Contribution to journalArticle

Poa pratensis
surface area
shoots
turf grasses
hydroponics

Trinexapac-ethyl and paclobutrazol affect Kentucky bluegrass single-leaf carbon exchange rates and plant growth

Beasley, J. S. & Branham, B. E., Jan 1 2007, In : Crop Science. 47, 1, p. 132-138 7 p.

Research output: Contribution to journalArticle

Poa pratensis
paclobutrazol
plant growth substances
plant growth
carbon

Turfgrass renovation using dazomet to control the Poa annua L. soil seed bank

Branham, B. E., Hardebeck, G. A., Meyer, J. W. & Reicher, Z. J., Dec 1 2004, In : HortScience. 39, 7, p. 1763-1767 5 p.

Research output: Contribution to journalArticle

dazomet
Poa annua
turf grasses
buried seeds
Agrostis stolonifera

Turfgrass root systems evaluated using the minirhizotron and video recording methods

Murphy, J. A., Hendricks, M. G., Rieke, P. E., Smucker, A. J. M. & Branham, B. E., Jan 1 1994, In : Agronomy Journal. 86, 2, p. 247-250 4 p.

Research output: Contribution to journalArticle

turf grasses
root systems
methodology

Two aphid species, phorodon cannabis and Rhopalosiphum rufiabdominale, Identified as Potential Pests on Industrial Hemp, Cannabis sativa L., in the US Midwest

Lagos-Kutz, D., Potter, B., DiFonzo, C., Russell, H. & Hartman, G. L., Jan 1 2018, In : Crop, Forage and Turfgrass Management. 4, 1, 180032.

Research output: Contribution to journalArticle

Phorodon
Rhopalosiphum
Cannabis
Cannabis sativa
hemp

Two classification methods for developing and interpreting productivity zones using site properties

Martín, N., Bollero, G., Kitchen, N. R., Kravchenko, A. N., Sudduth, K., Wiebold, W. J. & Bullock, D., Oct 1 2006, In : Plant and Soil. 288, 1-2, p. 357-371 15 p.

Research output: Contribution to journalArticle

productivity
discriminant analysis
maize
methodology
soybean

Two colors, one species: The case of melissodes nigroaenea (Apidae: Eucerini), an important pollinator of cotton fields in Brazil

Grando, C., Amon, N. D., Clough, S. J., Guo, N., Wei, W., Azevedo, P., López-Uribe, M. M. & Zucchi, M. I., Oct 2018, In : Sociobiology. 65, 4, p. 645-653 9 p.

Research output: Contribution to journalArticle

Melissodes
Apidae
pollinating insects
cotton
Brazil

Two new PPX2 mutations associated with resistance to PPO-inhibiting herbicides in Amaranthus palmeri

Giacomini, D. A., Umphres, A. M., Nie, H., Mueller, T. C., Steckel, L. E., Young, B. G., Scott, R. C. & Tranel, P. J., Aug 2017, In : Pest Management Science. 73, 8, p. 1559-1563 5 p.

Research output: Contribution to journalArticle

Amaranthus palmeri
protoporphyrinogen oxidase
herbicides
mutation
fomesafen

Two soybean plant introductions display slow leaf wilting and reduced yield loss under drought

Pathan, S. M., Lee, J. D., Sleper, D. A., Fritschi, F. B., Sharp, R. E., Carter, T. E., Nelson, R. L., King, C. A., Schapaugh, W. T., Ellersieck, M. R., Nguyen, H. T. & Shannon, J. G., Jun 2014, In : Journal of Agronomy and Crop Science. 200, 3, p. 231-236 6 p.

Research output: Contribution to journalArticle

wilting
introduced plants
drought
soybeans
irrigation

Two species of symbiotic bacteria present in the soybean aphid (Hemiptera: Aphididae)

Wille, B. D. & Hartman, G. L., Feb 2009, In : Environmental Entomology. 38, 1, p. 110-115 6 p.

Research output: Contribution to journalArticle

Aphididae
aphid
Arsenophonus
soybean
Hemiptera

Type VI secretion systems of Erwinia amylovora contribute to bacterial competition, virulence, and exopolysaccharide production

Tian, Y., Zhao, Y., Shi, L., Cui, Z., Hu, B. & Zhao, Y., Jun 2017, In : Phytopathology. 107, 6, p. 654-661 8 p.

Research output: Contribution to journalArticle

exopolysaccharides
Erwinia amylovora
virulence
mutants
levan

Tyrosine-610 in the receptor kinase BAK1 does not play a major role in brassinosteroid signaling or innate immunity

Singh, V., Perraki, A., Kim, S. Y., Shrivastava, S., Lee, J. H., Zhao, Y., Schwessinger, B., Oh, M. H., Marshall-Colon, A., Zipfel, C. & Huber, S. C., Aug 2 2017, In : Frontiers in Plant Science. 8, 1273.

Research output: Contribution to journalArticle

brassinosteroids
tyrosine
phosphotransferases (kinases)
receptors
flagellin

Ultra oil-producing

Huang, H., Long, S. P. & Singh, V., May 1 2015, International News on Fats, Oils and Related Materials, 26, 5, p. 278-282 5 p.

Research output: Contribution to specialist publicationArticle

Oils
oils

Ultrasonic purification of two Illinois isolates of barley yellow dwarf viruses

Latorre, I., D'Arcy, C. J. & Domier, L. L., Dec 1996, In : Canadian Journal of Plant Pathology. 18, 4, p. 424-428 5 p.

Research output: Contribution to journalArticle

Barley yellow dwarf virus-PAV
Barley yellow dwarf virus
ultrasonics
viruses
enzymes

Uncertainty in measurements of the photorespiratory CO2 compensation point and its impact on models of leaf photosynthesis

Walker, B. J., Orr, D. J., Carmo-Silva, E., Parry, M. A. J., Bernacchi, C. J. & Ort, D. R., Jun 1 2017, In : Photosynthesis research. 132, 3, p. 245-255 11 p.

Research output: Contribution to journalArticle

Photosynthesis
Ribulose-Bisphosphate Carboxylase
Uncertainty
uncertainty
carbon dioxide

Uncovering hidden genetic variation in photosynthesis of field-grown maize under ozone pollution

Choquette, N. E., Ogut, F., Wertin, T. M., Montes, C. M., Sorgini, C. A., Morse, A. M., Brown, P. J., Leakey, A. D. B., Mcintyre, L. M. & Ainsworth, E. A., Oct 1 2019, In : Global change biology. 25, 12, p. 4327-4338

Research output: Contribution to journalArticle

Open Access
Photosynthesis
Ozone
genetic variation
photosynthesis
Pollution

Understanding and improving global crop response to ozone pollution

Ainsworth, E., Jun 2017, In : Plant Journal. 90, 5, p. 886-897 12 p.

Research output: Contribution to journalArticle

Quantitative Trait Loci
Ozone
ozone
pollution
Air Pollutants