Research Output 1975 2019

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2019

Agbots: Weeding a field with a team of autonomous robots

McAllister, W., Osipychev, D., Davis, A. & Chowdhary, G., Aug 1 2019, In : Computers and Electronics in Agriculture. 163, 104827.

Research output: Contribution to journalArticle

Open Access
robots
weed
weed control
seed bank
Robots

Aligning Product Chemistry and Soil Context for Agronomic Reuse of Human-Derived Resources

Trimmer, J. T., Margenot, A. J., Cusick, R. & Guest, J. S., Jun 4 2019, In : Environmental Science and Technology. 53, 11, p. 6501-6510 10 p.

Research output: Contribution to journalArticle

Soils
Sanitation
Nutrients
struvite
sanitation

Amino acid differences in the N-terminal half of the polyprotein of Chinese turnip mosaic virus isolates affect symptom expression in Nicotiana benthamiana and radish

Hu, W. X., Seo, E. Y., Cho, I. S., Kim, J. K., Ju, H. K., Kim, I. H., Choi, G. W., Kim, B., Ahn, C. H., Domier, L. L., Oh, S. K., Hammond, J. & Lim, H. S., Jun 1 2019, In : Archives of Virology. 164, 6, p. 1683-1689 7 p.

Research output: Contribution to journalArticle

Raphanus
Mosaic Viruses
Polyproteins
Brassica napus
Tobacco

Ammonia flux measurements above a corn canopy using relaxed eddy accumulation and a flux gradient system

Nelson, A. J., Lichiheb, N., Koloutsou-Vakakis, S., Rood, M. J., Heuer, M., Myles, L. T., Joo, E., Miller, J. & Bernacchi, C., Jan 15 2019, In : Agricultural and Forest Meteorology. 264, p. 104-113 10 p.

Research output: Contribution to journalArticle

flux measurement
eddy
ammonia
maize
canopy

An assessment of true and false positive detection rates of stepwise epistatic model selection as a function of sample size and number of markers

Chen, A. H., Ge, W., Metcalf, W., Jakobsson, E., Mainzer, L. S. & Lipka, A. E., May 1 2019, In : Heredity. 122, 5, p. 660-671 12 p.

Research output: Contribution to journalArticle

Sample Size
Gene Frequency
Zea mays
Nucleotides
Genome

A physical model-based method for retrieving urban land surface temperatures under cloudy conditions

Fu, P., Xie, Y., Weng, Q., Myint, S., Meacham-Hensold, K. & Bernacchi, C., Sep 1 2019, In : Remote Sensing of Environment. 230, 111191.

Research output: Contribution to journalArticle

physical models
surface temperature
land surface
Mean square error
Temperature

Are we approaching a water ceiling to maize yields in the United States?

Delucia, E. H., Chen, S., Guan, K., Peng, B., Li, Y., Gomez-casanovas, N., Kantola, I. B., Bernacchi, C. J., Huang, Y., Long, S. P. & Ort, D. R., Jun 18 2019, In : Ecosphere. 10, 6, e02773.

Research output: Contribution to journalArticle

Open Access
maize
corn
vapor pressure
water
water use efficiency

A single nucleotide change in the overlapping MP and CP reading frames results in differences in symptoms caused by two isolates of Youcai mosaic virus

Ju, H. K., Kim, I. H., Hu, W. X., Kim, B., Choi, G. W., Kim, J., Lim, Y. P., Domier, L. L., Hammond, J. & Lim, H. S., Jan 1 2019, In : Archives of Virology.

Research output: Contribution to journalArticle

Mosaic Viruses
Reading Frames
Capsid Proteins
Nucleotides
Proteins

Assessing safe food handling knowledge and practices of food service managers in Doha, Qatar

Asim, H. S., Elnemr, I., Goktepe, I., Feng, H., Park, H. K., Alzeyara, S., AlHajri, M. & Kushad, M. M., Jul 1 2019, In : Food Science and Technology International. 25, 5, p. 440-448 9 p.

Research output: Contribution to journalArticle

Qatar
Food Services
food handling
Food Handling
food service

Assessing variation in maize grain nitrogen concentration and its implications for estimating nitrogen balance in the US North Central region

Tenorio, F. A. M., Eagle, A. J., McLellan, E. L., Cassman, K. G., Howard, R., Below, F. E., Clay, D. E., Coulter, J. A., Geyer, A. B., Joos, D. K., Lauer, J. G., Licht, M. A., Lindsey, A. J., Maharjan, B., Pittelkow, C. M., Thomison, P. R., Wortmann, C. S., Sadras, V. O. & Grassini, P., Jul 1 2019, In : Field Crops Research. 240, p. 185-193 9 p.

Research output: Contribution to journalArticle

nitrogen balance
maize
corn
nitrogen
removal

Assessing variation in us soybean seed composition (protein and oil)

Assefa, Y., Purcell, L. C., Salmeron, M., Naeve, S., Casteel, S. N., Kovács, P., Archontoulis, S., Licht, M., Below, F. E., Kandel, H., Lindsey, L. E., Gaska, J., Conley, S., Shapiro, C., Orlowski, J. M., Golden, B. R., Kaur, G., Singh, M., Thelen, K., Laurenz, R. & 2 othersDavidson, D. & Ciampitti, I. A., Mar 11 2019, In : Frontiers in Plant Science. 10, 298.

Research output: Contribution to journalArticle

Open Access
protein composition
soybeans
oils
seeds
seed yield

Biomass yield in a genetically diverse Miscanthus sinensis germplasm panel evaluated at five locations revealed individuals with exceptional potential

Clark, L. V., Dwiyanti, M. S., Anzoua, K. G., Brummer, J. E., Ghimire, B. K., Głowacka, K., Hall, M., Heo, K., Jin, X., Lipka, A. E., Peng, J., Yamada, T., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Jan 1 2019, In : GCB Bioenergy.

Research output: Contribution to journalArticle

Open Access
Miscanthus giganteus
Miscanthus sinensis
germplasm
Biomass
biomass

Boron and zinc deficiencies and toxicities and their interactions with other nutrients in soybean roots, leaves, and seeds

Pawlowski, M. L., Helfenstein, J., Frossard, E. & Hartman, G. L., Apr 3 2019, In : Journal of Plant Nutrition. 42, 6, p. 634-649 16 p.

Research output: Contribution to journalArticle

Boron
Cotyledon
boron
Soybeans
Zinc

Breeding progress and preparedness for mass-scale deployment of perennial lignocellulosic biomass crops switchgrass, miscanthus, willow and poplar

Clifton-Brown, J., Harfouche, A., Casler, M. D., Dylan Jones, H., Macalpine, W. J., Murphy-Bokern, D., Smart, L. B., Adler, A., Ashman, C., Awty-Carroll, D., Bastien, C., Bopper, S., Botnari, V., Brancourt-Hulmel, M., Chen, Z., Clark, L. V., Cosentino, S., Dalton, S., Davey, C., Dolstra, O. & 39 othersDonnison, I., Flavell, R., Greef, J., Hanley, S., Hastings, A., Hertzberg, M., Hsu, T. W., Huang, L. S., Iurato, A., Jensen, E., Jin, X., Jørgensen, U., Kiesel, A., Kim, D. S., Liu, J., McCalmont, J. P., McMahon, B. G., Mos, M., Robson, P., Sacks, E. J., Sandu, A., Scalici, G., Schwarz, K., Scordia, D., Shafiei, R., Shield, I., Slavov, G., Stanton, B. J., Swaminathan, K., Taylor, G., Torres, A. F., Trindade, L. M., Tschaplinski, T., Tuskan, G. A., Yamada, T., Yeon Yu, C., Zalesny, R. S., Zong, J. & Lewandowski, I., Jan 1 2019, In : GCB Bioenergy. 11, 1, p. 118-151 34 p.

Research output: Contribution to journalArticle

Miscanthus
Panicum virgatum
energy crops
Crops
Biomass

BSD2 is a Rubisco-specific assembly chaperone, forms intermediary hetero-oligomeric complexes, and is nonlimiting to growth in tobacco

Conlan, B., Birch, R., Kelso, C., Holland, S., De Souza, A. P., Long, S. P., Beck, J. L. & Whitney, S. M., Apr 1 2019, In : Plant Cell and Environment. 42, 4, p. 1287-1301 15 p.

Research output: Contribution to journalArticle

Ribulose-Bisphosphate Carboxylase
ribulose-bisphosphate carboxylase
Tobacco
tobacco
Growth
conservation programs
landowners
agroforestry
Federal Government
Retirement

Bundle sheath chloroplast volume can house sufficient Rubisco to avoid limiting C4 photosynthesis during chilling

Pignon, C. P., Lundgren, M. R., Osborne, C. P. & Long, S. P., Jan 1 2019, In : Journal of experimental botany. 70, 1, p. 357-365 9 p.

Research output: Contribution to journalArticle

Ribulose-Bisphosphate Carboxylase
C4 photosynthesis
Photosynthesis
ribulose-bisphosphate carboxylase
Chloroplasts

Carfentrazone-ethyl resistance in an Amaranthus tuberculatus population is not mediated by amino acid alterations in the PPO2 protein

Obenland, O. A., Ma, R., O’Brien, S. R., Lygin, A. V. & Riechers, D. E., Apr 1 2019, In : PloS one. 14, 4, e0215431.

Research output: Contribution to journalArticle

Open Access
carfentrazone
Amaranthus tuberculatus
Amaranthus
Protoporphyrinogen Oxidase
protoporphyrinogen oxidase
Amaranthus tuberculatus
protoporphyrinogen oxidase
herbicides
acetolactate synthase
2,4-D

Characterization of soybean STAY-GREEN genes in susceptibility to foliar chlorosis of sudden death syndrome

Chang, H. X., Tan, R., Hartman, G. L., Wen, Z., Sang, H., Domier, L. L., Whitham, S. A., Wang, D. & Chilvers, M. I., Jun 1 2019, In : Plant physiology. 180, 2, p. 711-717 7 p.

Research output: Contribution to journalArticle

Open Access
Hypochromic Anemia
chlorosis
Sudden Death
Soybeans
soybeans

Comparative Analysis of SUS Gene Family between Saccharum officinarum and Saccharum spontaneum

Shi, Y., Xu, H., Shen, Q., Lin, J., Wang, Y., Hua, X., Yao, W., Yu, Q., Ming, R. R. & Zhang, J., Jan 1 2019, In : Tropical Plant Biology.

Research output: Contribution to journalArticle

Saccharum spontaneum
Saccharum
Saccharum officinarum
sucrose synthase
Genes

Comparative genomics revealed the gene evolution and functional divergence of magnesium transporter families in Saccharum

Wang, Y., Hua, X., Xu, J., Chen, Z., Fan, T., Zeng, Z., Wang, H., Hour, A. L., Yu, Q., Ming, R. R. & Zhang, J., Jan 24 2019, In : BMC genomics. 20, 1, 5437.

Research output: Contribution to journalArticle

Saccharum
Genomics
Magnesium
Genes
Mya

Convergent evolution of saccate body shapes in nematodes through distinct developmental mechanisms

Thapa, S., Gates, M. K., Reuter-Carlson, U., Androwski, R. J. & Schroeder, N. E., Mar 14 2019, In : EvoDevo. 10, 1, 21 p., 5.

Research output: Contribution to journalArticle

Open Access
animal morphology
convergent evolution
Heterodera glycines
body shape
Glycine

Deleterious mutation burden and its association with complex traits in sorghum (Sorghum bicolor)

Valluru, R., Gazave, E. E., Fernandes, S. B., Ferguson, J. N., Lozano, R., Hirannaiah, P., Zuo, T., Brown, P. J., Leakey, A., Gore, M. A., Buckler, E. S. & Bandillo, N., Mar 1 2019, In : Genetics. 211, 3, p. 1075-1087 13 p.

Research output: Contribution to journalArticle

Sorghum
Mutation
Biomass
Genome
Starch

Designing multifunctional woody polycultures according to landowner preferences in Central Illinois

Stanek, E. C., Lovell, S. T. & Reisner, A. E., Jan 1 2019, (Accepted/In press) In : Agroforestry Systems.

Research output: Contribution to journalArticle

polyculture
landowners
landowner
nut
crop

Development of Economic Thresholds for Sugarcane Aphid (Hemiptera: Aphididae) in Susceptible Grain Sorghum Hybrids

Gordy, J. W., Brewer, M. J., Bowling, R. D., Buntin, G. D., Seiter, N. J., Kerns, D. L., Reay-Jones, F. P. F. & Way, M. O., May 22 2019, In : Journal of economic entomology. 112, 3, p. 1251-1259 9 p.

Research output: Contribution to journalArticle

Melanaphis sacchari
economic threshold
grain sorghum
sorghum
Aphididae

Dissecting the nonlinear response of maize yield to high temperature stress with model-data integration

Zhu, P., Zhuang, Q., Archontoulis, S. V., Bernacchi, C. & Müller, C., Jul 1 2019, In : Global change biology. 25, 7, p. 2470-2484 15 p.

Research output: Contribution to journalArticle

Data integration
maize
Crops
crop
Temperature

Drying-rewetting cycles affect nitrate removal rates in woodchip bioreactors

Maxwell, B. M., Birgand, F., Schipper, L. A., Christianson, L. E., Tian, S., Helmers, M. J., Williams, D. J., Chescheir, G. M. & Youssef, M. A., Jan 1 2019, In : Journal of Environmental Quality. 48, 1, p. 93-101 9 p.

Research output: Contribution to journalArticle

rewetting
Bioreactors
bioreactor
Nitrates
Drying
Open Access
Panicum virgatum
bioenergy
ozone
nutrient content
feedstocks

Epidermal remodeling in Caenorhabditis elegans dauers requires the nidogen domain protein DEX-1

Flatt, K. M., Beshers, C., Unal, C., Cohen, J. D., Sundaram, M. V. & Schroeder, N. E., Jan 1 2019, In : Genetics. 211, 1, p. 169-183 15 p.

Research output: Contribution to journalArticle

Caenorhabditis elegans
Zona Pellucida
Dendrites
Morphogenesis
Epidermis

Epithelial shaping by diverse apical extracellular matrices requires the nidogen domain protein DEX-1 in Caenorhabditis elegans

Cohen, J. D., Flatt, K. M., Schroeder, N. E. & Sundaram, M. V., Jan 1 2019, In : Genetics. 211, 1, p. 185-200 16 p.

Research output: Contribution to journalArticle

Zona Pellucida
Caenorhabditis elegans
Extracellular Matrix
Epithelium
Proteins

Evaluation of cover crop sensitivity to residual herbicides applied in the previous soybean [Glycine max (L.) Merr] crop

Whalen, D. M., Bish, M. D., Young, B. G., Hager, A. G., Conley, S. P., Reynolds, D. B., Steckel, L. E., Norsworthy, J. K. & Bradley, K. W., Apr 1 2019, In : Weed Technology. 33, 2, p. 312-320 9 p.

Research output: Contribution to journalArticle

fomesafen
metolachlor
cover crops
Glycine max
herbicides
Open Access
Sorghum
Genome-Wide Association Study
Sorghum (Poaceae)
marker-assisted selection
Zea mays

Evolution and Expression Analysis of Starch Synthase Gene Families in Saccharum spontaneum

Ma, P., Yuan, Y., Shen, Q., Jiang, Q., Hua, X., Zhang, Q., Zhang, M., Ming, R. R. & Zhang, J., Jan 1 2019, In : Tropical Plant Biology.

Research output: Contribution to journalArticle

Starch Synthase
Saccharum spontaneum
Saccharum
starch synthase
Genes

Exploring the differential mechanisms of carotenoid biosynthesis in the yellow peel and red flesh of papaya

Shen, Y. H., Yang, F. Y., Lu, B. G., Zhao, W. W., Jiang, T., Feng, L., Chen, X. J. & Ming, R. R., Jan 16 2019, In : BMC genomics. 20, 1, 49.

Research output: Contribution to journalArticle

Carica
Carotenoids
Biosynthetic Pathways
Fruit
Lutein

Field pathogenomics of Fusarium head blight reveals pathogen transcriptome differences due to host resistance

Fall, L. A., Salazar, M. M., Drnevich, J., Holmes, J. R., Tseng, M. C., Kolb, F. L. & Mideros Mora, S. X., Jan 1 2019, In : Mycologia.

Research output: Contribution to journalArticle

Fusarium head blight
Fusarium graminearum
Fusarium
Transcriptome
transcriptome

Field Studies on the Horizontal Transmission Potential by Voluntary and Involuntary Carriers of Helicoverpa armigera nucleopolyhedrovirus (Baculoviridae)

Black, J. L., Lorenz, G. M., Cato, A. J., Faske, T. R., Popham, H. J. R., Paddock, K. J., Bateman, N. R. & Seiter, N. J., May 22 2019, In : Journal of economic entomology. 112, 3, p. 1098-1104 7 p.

Research output: Contribution to journalArticle

Helicoverpa armigera nucleopolyhedrovirus
horizontal transmission
Baculoviridae
larva
arthropod

First report of bacterial leaf streak of corn caused by xanthomonas vasicola pv. vasculorum in Illinois

Jamann, T. M., Plewa, D., Mideros Mora, S. X. & Bissonnette, S., May 1 2019, In : Plant disease. 103, 5

Research output: Contribution to journalArticle

Xanthomonas vasicola
corn
leaves

Genetic dissection of domestication-related traits in soybean through genotyping-by-sequencing of two interspecific mapping populations

Swarm, S. A., Sun, L., Wang, X., Wang, W., Brown, P. J., Ma, J. & Nelson, R. L., Apr 1 2019, In : Theoretical and Applied Genetics. 132, 4, p. 1195-1209 15 p.

Research output: Contribution to journalArticle

domestication
Soybeans
genotyping
Dissection
quantitative trait loci

Genetic diversity, population structure and key phenotypic traits driving variation within soyabean (Glycine max) collection in Ghana

Denwar, N. N., Awuku, F. J., Diers, B. W., Addae-Frimpomaah, F., Chigeza, G., Oteng-Frimpong, R., Puozaa, D. K. & Barnor, M. T., Jan 1 2019, In : Plant Breeding.

Research output: Contribution to journalArticle

Ghana
Soybeans
Glycine max
population structure
principal component analysis

Genome-Wide Analysis of Nitrate Transporter (NRT/NPF) Family in Sugarcane Saccharum spontaneum L.

Wang, J., Li, Y., Zhu, F., Ming, R. R. & Chen, L., Jan 1 2019, In : Tropical Plant Biology.

Research output: Contribution to journalArticle

Saccharum spontaneum
Saccharum
sugarcane
transporters
nitrates

Genome-wide analysis of the MYB-CC gene family of maize

Bai, J., Sun, F., Wang, M., Su, L., Li, R. & Caetano-Anolles, G., Feb 15 2019, In : Genetica. 147, 1

Research output: Contribution to journalArticle

Zea mays
Genome
genome
corn
Genes

Genome-wide association and genomic prediction for biomass yield in a genetically diverse Miscanthus sinensis germplasm panel phenotyped at five locations in Asia and North America

Clark, L. V., Dwiyanti, M. S., Anzoua, K. G., Brummer, J. E., Ghimire, B. K., Głowacka, K., Hall, M., Heo, K., Jin, X., Lipka, A. E., Peng, J., Yamada, T., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Aug 1 2019, In : GCB Bioenergy. 11, 8, p. 988-1007 20 p.

Research output: Contribution to journalArticle

Open Access
Miscanthus sinensis
germplasm
Nucleotides
Polymorphism
single nucleotide polymorphism
Heterodera glycines
Polymorphism
Soybeans
Single Nucleotide Polymorphism
Cysts

Genome-wide association studies for yield-related traits in soft red winter wheat grown in Virginia

Ward, B. P., Brown-Guedira, G., Kolb, F. L., Van Sanford, D. A., Tyagi, P., Sneller, C. H. & Griffey, C. A., Feb 1 2019, In : PloS one. 14, 2, e0208217.

Research output: Contribution to journalArticle

Open Access
soft red winter wheat
Genome-Wide Association Study
Triticum
Genes
kinship

Genome wide association study identifies novel single nucleotide polymorphic loci and candidate genes involved in soybean sudden death syndrome resistance

Swaminathan, S., Das, A., Assefa, T., Knight, J. M., Da Silva, A. F., Carvalho, J. P. S., Hartman, G. L., Huang, X., Leandro, L. F., Cianzio, S. R. & Bhattacharyya, M. K., Feb 1 2019, In : PloS one. 14, 2, e0212071.

Research output: Contribution to journalArticle

Open Access
Genome-Wide Association Study
Sudden Death
Soybeans
Nucleotides
Genes

Genomic selection using maize ex-plant variety protection germplasm for the prediction of nitrogen-use traits

Mastrodomenico, A. T., Bohn, M. O., Lipka, A. E. & Below, F. E., Jan 1 2019, In : Crop Science. 59, 1, p. 212-220 9 p.

Research output: Contribution to journalArticle

plant variety protection
marker-assisted selection
germplasm
prediction
corn

Herbicide Metabolism: Crop Selectivity, Bioactivation, Weed Resistance, and Regulation

Nandula, V. K., Riechers, D. E., Ferhatoglu, Y., Barrett, M., Duke, S. O., Dayan, F. E., Goldberg-Cavalleri, A., Tétard-Jones, C., Wortley, D. J., Onkokesung, N., Brazier-Hicks, M., Edwards, R., Gaines, T., Iwakami, S., Jugulam, M. & Ma, R., Mar 1 2019, In : Weed Science. 67, 2, p. 149-175 27 p.

Research output: Contribution to journalArticle

herbicides
weeds
resistance mechanisms
metabolism
crops

Horizontal gene transfer in human-associated microorganisms inferred by phylogenetic reconstruction and reconciliation

Jeong, H., Arif, B., Caetano-Anolles, G., Kim, K. M. & Nasir, A., Dec 1 2019, In : Scientific Reports. 9, 1, 5953.

Research output: Contribution to journalArticle

Open Access
Horizontal Gene Transfer
Microbiota
Human Body
Human Genome
Genes

Implementation of the effect of urease inhibitor on ammonia emissions following urea-based fertilizer application at a Zea mays field in central Illinois: A study with SURFATM-NH 3 model

Lichiheb, N., Myles, L. T., Personne, E., Heuer, M., Buban, M., Nelson, A. J., Koloutsou-Vakakis, S., Rood, M. J., Joo, E., Miller, J. & Bernacchi, C., May 15 2019, In : Agricultural and Forest Meteorology. 269-270, p. 78-87 10 p.

Research output: Contribution to journalArticle

urease inhibitors
fertilizer application
urea
inhibitor
ammonia