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2020

Acidification in corn monocultures favor fungi, ammonia oxidizing bacteria, and nirK-denitrifier groups

Behnke, G. D., Zabaloy, M. C., Riggins, C. W., Rodríguez-Zas, S., Huang, L. & Villamil, M. B., Jun 10 2020, In : Science of the Total Environment. 720, 137514.

Research output: Contribution to journalArticle

Open Access

A connected half-sib family training population for genomic prediction in barley

Sweeney, D. W., Rutkoski, J., Bergstrom, G. C. & Sorrells, M. E., Jan 1 2020, In : Crop Science. 60, 1, p. 262-281 20 p.

Research output: Contribution to journalArticle

Open Access

A diallel analysis of a maize donor population response to in vivo maternal haploid induction: II. Haploid male fertility

De La Fuente, G. N., Frei, U. K., Trampe, B., Ren, J., Bohn, M., Yana, N., Verzegnazzi, A., Murray, S. C. & Lübberstedt, T., Mar 1 2020, In : Crop Science. 60, 2, p. 873-882 10 p.

Research output: Contribution to journalArticle

Allele specific expression of Dof genes responding to hormones and abiotic stresses in sugarcane

Cai, M., Lin, J., Li, Z., Lin, Z., Ma, Y., Wang, Y. & Ming, R., 2020, In : PloS one. 15, 1, e0227716.

Research output: Contribution to journalArticle

Open Access

Analysis of MADS-box genes revealed modified flowering gene network and diurnal expression in pineapple

Zhang, X., Fatima, M., Zhou, P., Ma, Q. & Ming, R., Jan 2 2020, In : BMC genomics. 21, 1, 8.

Research output: Contribution to journalArticle

Open Access

A natural colorant system from corn: Flavone-anthocyanin copigmentation for altered hues and improved shelf life

Chatham, L. A., Howard, J. E. & Juvik, J. A., Apr 25 2020, In : Food chemistry. 310, 125734.

Research output: Contribution to journalArticle

Antagonism of Trichoderma-based biofungicides against Brazilian and North American isolates of Sclerotinia sclerotiorum and growth promotion of soybean

Macena, A. M. F., Kobori, N. N., Mascarin, G. M., Vida, J. B. & Hartman, G. L., Apr 1 2020, In : BioControl. 65, 2, p. 235-246 12 p.

Research output: Contribution to journalArticle

A pathogenesis-related protein GmPR08-Bet VI promotes a molecular interaction between the GmSHMT08 and GmSNAP18 in resistance to Heterodera glycines

Lakhssassi, N., Piya, S., Bekal, S., Liu, S., Zhou, Z., Bergounioux, C., Miao, L., Meksem, J., Lakhssassi, A., Jones, K., Kassem, M. A., Benhamed, M., Bendahmane, A., Lambert, K., Boualem, A., Hewezi, T. & Meksem, K., Aug 1 2020, In : Plant Biotechnology Journal. 18, 8, p. 1810-1829 20 p.

Research output: Contribution to journalArticle

Open Access

Aphis glycines virus 1, a new bicistronic virus with two functional internal ribosome entry sites, is related to a group of unclassified viruses in the Picornavirales

Yasmin, T., Thekke-Veetil, T., Hobbs, H. A., Nelson, B. D., McCoppin, N. K., Lagos-Kutz, D., Hartman, G. L., Lambert, K. N., Walker, D. R. & Domier, L. L., Jan 1 2020, In : Journal of General Virology. 101, 1, p. 105-111 7 p.

Research output: Contribution to journalArticle

Open Access

Assessing the sensitivity and repeatability of permanganate oxidizable carbon as a soil health metric: An interlab comparison across soils

Wade, J., Maltais-Landry, G., Lucas, D. E., Bongiorno, G., Bowles, T. M., Calderón, F. J., Culman, S. W., Daughtridge, R., Ernakovich, J. G., Fonte, S. J., Giang, D., Herman, B. L., Guan, L., Jastrow, J. D., Loh, B. H. H., Kelly, C., Mann, M. E., Matamala, R., Miernicki, E. A., Peterson, B. & 12 others, Pulleman, M. M., Scow, K. M., Snapp, S. S., Thomas, V., Tu, X., Wang, D., Jelinski, N. A., Liles, G. C., Barrios-Masias, F. H., Rippner, D. A., Silveira, M. L. & Margenot, A. J., May 1 2020, In : Geoderma. 366, 114235.

Research output: Contribution to journalArticle

Association between metabolic resistances to atrazine and mesotrione in a multiple-resistant waterhemp (Amaranthus tuberculatus) population

Jacobs, K. E., Butts-Wilmsmeyer, C. J., Ma, R., O’brien, S. R. & Riechers, D. E., Apr 28 2020, In : Weed Science. p. 1-9

Research output: Contribution to journalArticle

A wish list for synthetic biology in photosynthesis research

Zhu, X. G., Ort, D. R., Parry, M. A. J. & Von Caemmerer, S., Apr 6 2020, In : Journal of experimental botany. 71, 7, p. 2219-2225 7 p.

Research output: Contribution to journalArticle

Open Access

Bacterial Origin and Reductive Evolution of the CPR Group

Bokhari, R. H., Amirjan, N., Jeong, H., Kim, K. M., Caetano-Anollés, G. & Nasir, A., Mar 1 2020, In : Genome biology and evolution. 12, 3, p. 103-121 19 p.

Research output: Contribution to journalArticle

Open Access

Beneficial bacterial volatile compounds for the control of root-knot nematode and bacterial leaf blight on rice

Bui, H. X., Hadi, B. A. R., Oliva, R. & Schroeder, N. E., Jan 1 2020, (Accepted/In press) In : Crop Protection. 135, 104792.

Research output: Contribution to journalArticle

Biomass Production of Prairie Cordgrass (Spartina pectinata Link.) Using Urea and Kura Clover (Trifolium ambiguum Bieb.) as a Source of Nitrogen

Kim, S. U., Albrecht, K., Sheaffer, C., Lee, D., Subramanian, S. & Owens, V., Jan 1 2020, (Accepted/In press) In : Bioenergy Research.

Research output: Contribution to journalArticle

Open Access
Open Access

Conserved defense responses between maize and sorghum to Exserohilum turcicum

Zhang, X., Fernandes, S. B., Kaiser, C., Adhikari, P., Brown, P. J., Mideros, S. X. & Jamann, T. M., Feb 10 2020, In : BMC Plant Biology. 20, 1, 67.

Research output: Contribution to journalArticle

Open Access

Denitrifying bioreactor inflow manifold design for treatment of aquacultural wastewater

Lepine, C., Christianson, L., McIsaac, G. & Summerfelt, S., Feb 2020, In : Aquacultural Engineering. 88, 102036.

Research output: Contribution to journalArticle

Open Access

Denitrifying bioreactor woodchip recharge: Media properties after nine years

Christianson, L., Feyereisen, G., Hay, C., Tschirner, U., Kult, K., Wickramarathne, N., Hoover, N. & Soupir, M., 2020, In : Transactions of the ASABE. 63, 2, p. 407-416 10 p.

Research output: Contribution to journalArticle

Open Access

Deriving high-spatiotemporal-resolution leaf area index for agroecosystems in the U.S. Corn Belt using Planet Labs CubeSat and STAIR fusion data

Kimm, H., Guan, K., Jiang, C., Peng, B., Gentry, L. F., Wilkin, S., Wang, S., Cai, Y., Bernacchi, C. J., Peng, J. & Luo, Y., Mar 15 2020, In : Remote Sensing of Environment. 239, 111615.

Research output: Contribution to journalArticle

Development and Evaluation of SSR Markers Based on Large Scale Full-Length Transcriptome Sequencing in Sugarcane

Xiao, N., Wang, H., Yao, W., Zhang, M., Ming, R. & Zhang, J., Jan 1 2020, (Accepted/In press) In : Tropical Plant Biology.

Research output: Contribution to journalArticle

Diversity of metabolite accumulation patterns in inner and outer seed coats of pomegranate: exploring their relationship with genetic mechanisms of seed coat development

Qin, G., Liu, C., Li, J., Qi, Y., Gao, Z., Zhang, X., Yi, X., Pan, H., Ming, R. & Xu, Y., Dec 1 2020, In : Horticulture Research. 7, 1, 10.

Research output: Contribution to journalArticle

DNA methylome and transcriptome landscapes revealed differential characteristics of dioecious flowers in papaya

Zhou, P., Zhang, X., Fatima, M., Ma, X., Fang, H., Yan, H. & Ming, R., Dec 1 2020, In : Horticulture Research. 7, 1, 81.

Research output: Contribution to journalArticle

Open Access

Do cover crops benefit soil microbiome? A meta-analysis of current research

Kim, N., Zabaloy, M. C., Guan, K. & Villamil, M. B., Mar 2020, In : Soil Biology and Biochemistry. 142, 107701.

Research output: Contribution to journalArticle

Open Access

Economically optimal plant density for machine-harvested edamame

Dhaliwal, D. S. & Williams, M. M., Mar 1 2020, In : HortScience. 55, 3, p. 368-373 6 p.

Research output: Contribution to journalArticle

Open Access

Economically Optimal Wheat Yield, Protein and Nitrogen Use Component Responses to Varying N Supply and Genotype

Pan, W. L., Kidwell, K. K., McCracken, V. A., Bolton, R. P. & Allen, M., Feb 25 2020, In : Frontiers in Plant Science. 10, 1790.

Research output: Contribution to journalArticle

Open Access

Eradication of Xanthomonas cucurbitae in pumpkin seed by hot-water treatment

Babadoost, M. & Zhang, X., Jan 29 2020, In : Acta Horticulturae. 1269, p. 9-16 8 p.

Research output: Contribution to journalArticle

Estimating photosynthetic traits from reflectance spectra: A synthesis of spectral indices, numerical inversion, and partial least square regression

Fu, P., Meacham-Hensold, K., Guan, K., Wu, J. & Bernacchi, C., Jan 1 2020, (Accepted/In press) In : Plant Cell and Environment.

Research output: Contribution to journalArticle

Open Access

Expression and comparison of sweet corn CYP81A9s in relation to nicosulfuron sensitivity

Choe, E. & Williams, M. M., Jan 1 2020, (Accepted/In press) In : Pest Management Science.

Research output: Contribution to journalArticle

Field Performance of Saccharum × Miscanthus Intergeneric Hybrids (Miscanes) Under Cool Climatic Conditions of Northern Japan

Kar, S., Weng, T. Y., Nakashima, T., Villanueva-Morales, A., Stewart, J. R., Sacks, E. J., Terajima, Y. & Yamada, T., Mar 1 2020, In : Bioenergy Research. 13, 1, p. 132-146 15 p.

Research output: Contribution to journalArticle

From graph topology to ODE models for gene regulatory networks

Kang, X., Hajek, B. & Hanzawa, Y., 2020, In : PloS one. 15, 6, p. e0235070

Research output: Contribution to journalArticle

Open Access

Genetic analysis of the transition from wild to domesticated cotton (Gossypium hirsutum L.)

Grover, C. E., Yoo, M. J., Lin, M., Murphy, M. D., Harker, D. B., Byers, R. L., Lipka, A. E., Hu, G., Yuan, D., Conover, J. L., Udall, J. A., Paterson, A. H., Gore, M. A. & Wendel, J. F., Feb 1 2020, In : G3: Genes, Genomes, Genetics. 10, 2, p. 731-754 24 p.

Research output: Contribution to journalArticle

Open Access

Genome-wide expression of low temperature response genes in Rosa hybrida L.

dos Reis, M. V., Rouhana, L. V., Sadeque, A., Koga, L., Clough, S. J., Calla, B., Paiva, P. D. D. O. & Korban, S. S., Jan 2020, In : Plant Physiology and Biochemistry. 146, p. 238-248 11 p.

Research output: Contribution to journalArticle

Genome-wide identification and expression profile analysis of WRKY family genes in the autopolyploid saccharum spontaneum

Li, Z., Hua, X., Zhong, W., Yuan, Y., Wang, Y., Wang, Z., Ming, R. & Zhang, J., Mar 1 2020, In : Plant and Cell Physiology. 61, 3, p. 616-630 15 p.

Research output: Contribution to journalArticle

Genomic regions influencing aggressive behavior in honey bees are defined by colony allele frequencies

Avalos, A., Fang, M., Pan, H., Ramirez Lluch, A., Lipka, A. E., Zhao, S. D., Giray, T., Robinson, G. E., Zhang, G. & Hudson, M. E., Jul 6 2020, In : Proceedings of the National Academy of Sciences.

Research output: Contribution to journalArticle

Genomic variation between PRSV resistant transgenic SunUp and its progenitor cultivar Sunset

Fang, J., Fang, J., Fang, J., Fang, J., Wood, A. M., Chen, Y., Chen, Y., Yue, J., Ming, R. & Ming, R., Jun 12 2020, In : BMC genomics. 21, 1, 398.

Research output: Contribution to journalArticle

Open Access

Genotyping-by-Sequencing for Analysis of the Genetic Variation of Podosphaera xanthii, Incitant of Cucurbit Powdery Mildew

Xiang, Y., Miller, A. N., McGrath, M. & Babadoost, M., Jan 1 2020, In : Plant disease. 104, 3, p. 951-957 7 p.

Research output: Contribution to journalArticle

Open Access

Identification of quantitative trait loci associated with maize resistance to bacterial leaf streak

Qiu, Y., Kaiser, C., Schmidt, C., Broders, K., Robertson, A. E. & Jamann, T. M., Jan 1 2020, In : Crop Science. 60, 1, p. 226-237 12 p.

Research output: Contribution to journalArticle

Impact of P inputs on source-sink P dynamics of sediment along an agricultural ditch network

Ezzati, G., Fenton, O., Healy, M. G., Christianson, L., Feyereisen, G. W., Thornton, S., Chen, Q., Fan, B., Ding, J. & Daly, K., Mar 1 2020, In : Journal of Environmental Management. 257, 109988.

Research output: Contribution to journalArticle

Open Access

Integrated assessment of crop production and resource use efficiency indicators for the U.S. Corn Belt

Riccetto, S., Davis, A. S., Guan, K. & Pittelkow, C. M., Mar 2020, In : Global Food Security. 24, 100339.

Research output: Contribution to journalArticle

Open Access

Intra-specific comparison of mitochondrial genomes reveals host gene fragment exchange via intron mobility in Tremella fuciformis

Deng, Y., Deng, Y., Zhang, X., Xie, B., Lin, L., Hsiang, T., Lin, X., Lin, Y., Zhang, X., Ma, Y., Miao, W., Ming, R. & Ming, R., Jun 24 2020, In : BMC genomics. 21, 1, 426.

Research output: Contribution to journalArticle

Open Access

Light, Not Age, Underlies The Maladaptation Of Maize And Miscanthus C4 Photosynthesis To Self-Shading

Collison, R., Raven, E., Pignon, C. P. & Long, S. P., May 18 2020, (Accepted/In press) In : Frontiers in Plant Science.

Research output: Contribution to journalArticle

Open Access

Lithological and bioclimatic impacts on soil phosphatase activities in California temperate forests

Gu, C., Wilson, S. G. & Margenot, A. J., Feb 2020, In : Soil Biology and Biochemistry. 141, 107633.

Research output: Contribution to journalArticle

Lysobacter enzymogenes employs diverse genes for inhibiting hypha growth and spore germination of soybean fungal pathogens

Yu, M., Zhang, G., Jiang, J., Du, L. & Zhao, Y., Jan 1 2020, In : Phytopathology. 110, 3, p. 593-602 10 p.

Research output: Contribution to journalArticle

Maize genomes to fields (G2F): 2014-2017 field seasons: Genotype, phenotype, climatic, soil, and inbred ear image datasets

McFarland, B. A., Alkhalifah, N., Bohn, M., Bubert, J., Buckler, E. S., Ciampitti, I., Edwards, J., Ertl, D., Gage, J. L., Falcon, C. M., Flint-Garcia, S., Gore, M. A., Graham, C., Hirsch, C. N., Holland, J. B., Hood, E., Hooker, D., Jarquin, D., Kaeppler, S. M., Knoll, J. & 34 others, Kruger, G., Lauter, N., Lee, E. C., Lima, D. C., Lorenz, A., Lynch, J. P., McKay, J., Miller, N. D., Moose, S. P., Murray, S. C., Nelson, R., Poudyal, C., Rocheford, T., Rodriguez, O., Romay, M. C., Schnable, J. C., Schnable, P. S., Scully, B., Sekhon, R., Silverstein, K., Singh, M., Smith, M., Spalding, E. P., Springer, N., Thelen, K., Thomison, P., Tuinstra, M., Wallace, J., Walls, R., Wills, D., Wisser, R. J., Xu, W., Yeh, C. T. & De Leon, N., Feb 12 2020, In : BMC Research Notes. 13, 1, 71.

Research output: Contribution to journalArticle

Open Access

Metabolic resistance to S-metolachlor in two waterhemp (Amaranthus tuberculatus) populations from Illinois, USA

Strom, S. A., Hager, A. G., Seiter, N. J., Davis, A. S. & Riechers, D. E., Jan 1 2020, (Accepted/In press) In : Pest Management Science.

Research output: Contribution to journalArticle

Modeling yield response to crop management using convolutional neural networks

Barbosa, A., Trevisan, R., Hovakimyan, N. & Martin, N. F., Mar 2020, In : Computers and Electronics in Agriculture. 170, 105197.

Research output: Contribution to journalArticle

Open Access