Research Output 1975 2020

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Conference contribution

Additive and multiplicative genome-wide association models identify genes associated with growth

Zavala, C., Serao, N., Villamil, M. B., Caetano-Anolles, G. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 975-977 3 p. 6112527. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Single Nucleotide Polymorphism
Genes
Genome
Nutrition
Growth

Advanced statistical analysis of RNA-Seq differential gene expression profiles of animal gene-environment interactions

Caetano-Anollés, K., Nixon, S., Mishra, S. & Rodriguez-Zas, S. L., Jan 1 2014, Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014. International Society for Computers and Their Applications, p. 43-47 5 p. (Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Gene-Environment Interaction
RNA
Transcriptome
Gene expression
Statistical methods

Application of SWAT to a tile drained watershed in East-Central Illinois

Kent, G. W., Rodriguez, L. F., Cooke, R. A. C. & Czapar, G. F., Jan 1 2012, American Society of Agricultural and Biological Engineers Annual International Meeting 2012, ASABE 2012. American Society of Agricultural and Biological Engineers, p. 1057-1075 19 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2012, ASABE 2012; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Soil and Water Assessment Tool model
tiles
Tile
Watersheds
Water quality

A spatially explicit, agent-based model for simulating movements of cattle grazing corn residues

Liu, T., Rodriguez, L. F., Lehman, B. E., Miller, A. R., Villamil, M. B. & Shike, D. W., Jan 1 2016, 2016 American Society of Agricultural and Biological Engineers Annual International Meeting, ASABE 2016. American Society of Agricultural and Biological Engineers, (2016 American Society of Agricultural and Biological Engineers Annual International Meeting, ASABE 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Crops
grazing
corn
cattle
crop residues

A system to evaluate prime farmland reclamation success based on spatial soil properties

Dunker, R. E., Bullock, D. G., Bollero, G. A. & Armstrong, K. L., Dec 1 2012, 29th Annual National Conference of the American Society of Mining and Reclamation 2012, ASMR 2012. p. 103-132 30 p. (29th Annual National Conference of the American Society of Mining and Reclamation 2012, ASMR 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Reclamation
crop yield
soil property
agricultural land
Crops

Biochemical basis of the activation of promutagens by plant cell systems

Plewa, M. J., 1991, ASTM Special Technical Publication. Gorsuch, J. W., Lower, W. R., Lewis, M. A., Sandhu, S. & Wang, W. (eds.). 1115 ed. Publ by ASTM, p. 287-296 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Chemical activation
Assays
Agricultural chemicals
Mutagens
Tobacco

Changes in the activities of antioxidant enzymes affect scald development in 'red spur delicious' apple fruit

Abbasi, N. A. & Kushad, M. M., 2005, International Conference Postharvest Unlimited Downunder 2004. International Society for Horticultural Science, p. 351-354 4 p. (Acta Horticulturae; vol. 687).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

apples
antioxidant activity
fruits
enzymes

Comparative analysis of binary logistic regression to artificial neural networks in predicting precursor sequence cleavage

Tegge, A., Rodriguez-Zas, S. L., Sweedler, J. V. & Southey, B., 2007, Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW. p. 101-108 8 p. 4425407

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Logistics
Neural networks
Amino acids
Bioinformatics
Rats

Comparative analysis of the RcsC sensor kinase from Erwinia amylovora and other enterobacteria

Wang, D. P., Zhao, Y. & Korban, S. S., May 13 2011, XII International Workshop on Fire Blight. Sobiczewski, P., Pulawska, J. & Kaluzna, M. (eds.). p. 165-172 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Erwinia
Erwinia amylovora
phosphotransferases (kinases)
virulence
mutants

Comparative cytotoxicity and genotoxicity of priority DBPs

Plewa, M. J., Dec 1 2008, American Water Works Association - American Water Works Association Association Annual Conference and Exposition, ACE 2008. (American Water Works Association - American Water Works Association Association Annual Conference and Exposition, ACE 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

genotoxicity
cytotoxicity

Comparative mammalian cell toxicity of N-DBPs and C-DBPs

Plewa, M. J., Wagner, E. D., Muellner, M. G., Hsu, K. M. & Richardson, S. D., Aug 5 2008, Disinfection By-Products in Drinking Water: Occurrence, Formation, Health Effects, and Control. American Chemical Society, p. 36-50 15 p. (ACS Symposium Series; vol. 995).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Disinfection
Byproducts
Toxicity
Cells
Disinfectants

Comparison of tandem mass spectrometry search methods to identify neuropeptides

Akhtar, M. N., Southey, B. R., Porter, K. I., Sweedler, J. V. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 982-984 3 p. 6112530. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tandem Mass Spectrometry
Neuropeptides
Mass spectrometry
Peptides
Amino acids

Computational agroecology: Sustainable food ecosystem design

Raghavan, B., Nardi, B., Lovell, S. T., Norton, J., Tomlinson, B. & Patterson, D. J., May 7 2016, CHI EA 2016: #chi4good - Extended Abstracts, 34th Annual CHI Conference on Human Factors in Computing Systems. Association for Computing Machinery, p. 423-435 13 p. (Conference on Human Factors in Computing Systems - Proceedings; vol. 07-12-May-2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ecosystems
Agriculture
Fossil fuels
Sustainable development
Systems analysis

Detecting soybean rust severity in terms of multispectral images

Cui, D., Li, M., Zhang, Q., Hartman, G. L. & Zhao, Y., Dec 1 2009, American Society of Agricultural and Biological Engineers Annual International Meeting 2009, ASABE 2009. p. 1327-1342 16 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2009, ASABE 2009; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

soybean rust
Soybeans
soybeans
rust diseases
Color

Enhanced prediction of cleavage in bovine precursor sequences

Tegge, A. N., Rodriguez-Zas, S. L., Sweedler, J. V. & Southey, B. R., Aug 3 2007, Bioinformatics Research and Applications - Third International Symposium, ISBRA 2007, Proceedings. p. 350-360 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4463 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Neuropeptides
Precursor
Prediction
Logistic Model
Amino Acids

Enhancing DNA microarray detection limits using optical resonances from photonic crystal surfaces

Mathias, P. C., Jones, S. I., Gonzalez, D. O., Vodkin, L. O. & Cunningham, B. T., Dec 11 2009, TRANSDUCERS 2009 - 15th International Conference on Solid-State Sensors, Actuators and Microsystems. p. 730-733 4 p. 5285438. (TRANSDUCERS 2009 - 15th International Conference on Solid-State Sensors, Actuators and Microsystems).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Microarrays
Photonic crystals
DNA
Glass
Genes

Evaluation of significance level assignment of database search programs using monte carlo permutation approach

Akhtar, M. N., Southey, B. R., Andrén, P. E., Sweedler, J. V. & Rodriguez-Zas, S. L., Jan 1 2014, Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014. International Society for Computers and Their Applications, p. 103-107 5 p. (Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Databases
Peptides
Neuropeptides
Tandem Mass Spectrometry
Mass spectrometry

Evolution and function of flagellar and non-flagellar type III secretion systems in Erwinia amylovora

Zhao, Y., Qi, M. S. & Wang, D. P., May 13 2011, XII International Workshop on Fire Blight. International Society for Horticultural Science, p. 177-184 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

type III secretion system
Erwinia amylovora
bacterial motility
phylogeny
Sodalis glossinidius

Evolution of protein architectures inferred from phylogenomic analysis of CATH

Bukhari, S. A. & Caetano-Anolles, G., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 1029-1031 3 p. 6112548. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Proteins
Benchmarking
Phylogeny
Solenoids
Propellers

Hierarchical modeling of alternative exon usage associations with survival

Sadeque, A., Serão, N. V. L., Southey, B. R., Fazal, Z. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 978-980 3 p. 6112528. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Exons
Genes
Survival
Glioblastoma
Association reactions

Identification and quantification of phenolic compounds in grapes

Rivera-Dominguez, M., Wlodarchak, N., Kushad, M. & Yahia, E. M., Nov 11 2010, Acta Horticulturae. International Society for Horticultural Science, p. 1233-1240 8 p. (Acta Horticulturae; vol. 877).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

protocatechuic acid
grapes
phenolic compounds
caffeic acid
gallic acid

Impact of bias correction methods and increasing the biological samples in transcriptomic analysis

González-Peña, D., Nixon, S. E., Southey, B. R., Lawson, M. A., McCusker, R. H., Dantzer, R., Kelley, K. W. & Rodriguez-Zas, S. L., Jan 1 2014, Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014. International Society for Computers and Their Applications, p. 115-118 4 p. (Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

RNA
Sample Size
Indoleamine-Pyrrole 2,3,-Dioxygenase
RNA Sequence Analysis
Macrophages

Important fungal diseases of tomato in the United States of America

Babadoost, M., Nov 25 2011, III International Symposium on Tomato Diseases. International Society for Horticultural Science, p. 85-92 8 p. (Acta Horticulturae; vol. 914).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Phytophthora infestans
molds (fungi)
Septoria lycopersici
leaf spot
tomatoes

Inference of gene pathways using Gaussian mixture models

Ko, Y., Zhai, C. & Rodriguez-Zas, S. L., Dec 1 2007, Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2007. p. 362-367 6 p. 4413078. (Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2007).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Genes
Bayesian networks
Gene expression
Gene Components
Biological Phenomena

Integrated approaches for management of Phytophthora blight (Phytophthora capsici) of cucurbits

Babadoost, M., Pavon, C. & Thruppoyil, S. B., Aug 31 2010, Acta Horticulturae. International Society for Horticultural Science, p. 527-534 8 p. (Acta Horticulturae; vol. 871).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Phytophthora capsici
Cucurbitaceae
Phytophthora
blight
seed treatment

Integration of polygenic and individual SNP effects in genome-wide association analyses

Serão, N. V. L., Beever, J. E., Faulkner, D. B. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 985-987 3 p. 6112531. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Genome-Wide Association Study
Single Nucleotide Polymorphism
Genes
Chromosomes
Chromosomes, Human, Pair 3

Integration of sequence and functional information to identify and annotate neuropeptides in the pig genome

Porter, K. I., Southey, B. R., Akhtar, M. N., Sweedler, J. V. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 988-990 3 p. 6112532. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Neuropeptides
Swine
Genes
Genome
Proprotein Convertases

Integration of statistical models and visualization tools to characterize microRNA networks influencing cancer

Delfino, K. R. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 969-971 3 p. 6112523. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transcription factors
Biomarkers
Statistical Models
MicroRNAs
Visualization

Integration of statistical models and visualization tools to characterize microRNA networks influencing cancer

Karnia, J., Delfino, K. R., Villamil, M. B., Caetano-Anolles, G. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 1009-1011 3 p. 6112541. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Statistical Models
MicroRNAs
Immune system
Immune System
Visualization

Leaf mold (Fulvia fulva), a serious threat to high tunnel tomato production in Illinois

Babadoost, M., Nov 25 2011, III International Symposium on Tomato Diseases. International Society for Horticultural Science, p. 93-96 4 p. (Acta Horticulturae; vol. 914).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Passalora fulva
molds (fungi)
tomatoes
signs and symptoms (plants)
leaves

Microarray characterization of the hrpl regulon of the fire blight pathogen Erwinia amylovora

McNally, R. R., Sundin, G. W., Toth, I. K., Cock, P. J. A., Hedley, P. E. & Zhao, Y., May 13 2011, XII International Workshop on Fire Blight. International Society for Horticultural Science, p. 263-270 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

regulon
Erwinia amylovora
type III secretion system
pathogens
genes

Model of ion intensity from tandem mass spectra for improved peptide identification and simulation

Fazal, Z., Southey, B. R., Sadeque, A., Sweedler, J. V. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 994-996 3 p. 6112534. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Peptides
Ions
Mass spectrometry
Tandem Mass Spectrometry
Protons

North American NC-140 apple orchard systems trial

Barritt, B. H., Barden, J. A., Cline, J., Granger, R. L., Hoover, E. E., Kushad, M. M., Marini, R. P., Parker, M., Perry, R. L., Robinson, T., Unrath, C. R. & Dilley, M. A., Jan 1 1997, VI International Symposium on Integrated Canopy, Rootstock, Environmental Phyiology in Orchard Systems. International Society for Horticultural Science, p. 443-452 10 p. (Acta Horticulturae; vol. 451).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

orchards
apples
rootstocks
Quebec
Ontario

Performance of Cornell-Geneva apple rootstocks with 'Liberty' as the scion in NC-140 trials across North America

Robinson, T., Anderson, L., Azarenko, A., Barritt, B., Baugher, T., Brown, G., Couvillon, G., Cowgill, W., Crassweller, R., Domoto, P., Embree, C., Fennell, A., Garcia, E., Gaus, A., Granger, R., Greene, G., Hirst, P., Hoover, E., Johnson, S., Kushad, M. M. & 10 others, Moran, R., Mullins, C., Myers, S., Perry, R., Rom, C., Schupp, J., Taylor, K., Warmund, M., Warner, J. & Wolfe, D., Aug 31 2003, XXVI International Horticultural Congress: Genetics and Breeding of Tree Fruis and Nuts. International Society for Horticultural Science, p. 521-530 10 p. (Acta Horticulturae; vol. 622).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

scions
rootstocks
apples
small fruits
dwarfing

Performance of cornell-geneva rootstocks across north america in multi-location nc-140 rootstock trials

Robinson, T. L., Anderson, L., Azarenko, A., Barritt, B. H., Brown, G., Cline, J., Crassweller, R., Domoto, P., Embree, C., Fennell, A., Ferree, D., Garcia, E., Gaus, A., Greene, G., Hampson, C., Hirst, P., Hoover, E., Johnson, S., Kushad, M. M., Marini, R. E. & 14 others, Moran, R., Mullins, C., Parker, M., Perry, R., Privé, J. P., Reighard, G., Rom, C. R., Roper, T., Schupp, J. R., Warmund, M., Autio, W., Cowgil, W., Taylor, K. & Wolfe, D., Jan 1 2004, I International Symposium on Rootstocks for Deciduous Fruit Tree Species. International Society for Horticultural Science, p. 241-245 5 p. (Acta Horticulturae; vol. 658).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

rootstocks
scions
fruits
dwarfing
Erwinia amylovora

Performance of denitrification beds for removing nitrate from drainage water at cold temperatures

Ghane, E., Feyereisen, G. W., Rosen, C. J., Sadowsky, M. J. & Christianson, L. E., Jan 1 2016, 10th International Drainage Symposium 2016. American Society of Agricultural and Biological Engineers, p. 236-239 4 p. (10th International Drainage Symposium 2016; vol. 2016-January).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

drainage water
bioreactor
denitrification
nitrate
temperature

Performance of Gala' at year 5 with eight apple rootstocks in an 8-location north American NC-140 trial

Barritt, B. H., Barden, J. A., Cline, J., Granger, R. L., Kushad, M. M., Marini, R. P., Parker, M., Perry, R. L., Robinson, T., Unrath, C. R. & Dilley, M. A., Dec 1 1997, VI International Symposium on Integrated Canopy, Rootstock, Environmental Phyiology in Orchard Systems. Barritt, B. V. & Barritt, F. (eds.). p. 129-135 7 p. (Acta Horticulturae; vol. 451).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

rootstocks
apples
fruits
row spacing
Quebec

Plant specific direct chemical application field robot

Jeon, H. Y., Tian, L., Bode, L., Grift, T. E. & Hager, A. G., Dec 1 2009, American Society of Agricultural and Biological Engineers Annual International Meeting 2009, ASABE 2009. p. 692-711 20 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2009, ASABE 2009; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

robots
Robotics
weeds
Lighting
computer vision

Prediction of starch content and ethanol yields of sorghum grain using near infrared spectroscopy

Li, J., Chen, S. F., Li, S., Singh, V., Brown, P. J. & Danao, M. G. C., Jan 1 2014, American Society of Agricultural and Biological Engineers Annual International Meeting 2014, ASABE 2014. American Society of Agricultural and Biological Engineers, p. 1020-1028 9 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2014, ASABE 2014; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Sorghum
Near infrared spectroscopy
Near-Infrared Spectroscopy
grain sorghum
near-infrared spectroscopy

Regulatory genes and environmental regulation of amylovoran biosynthesis in Erwinia amylovora

Wang, D. P., Clough, S. J., Zhao, Y., Sundin, G. W., Korban, S. S. & Toth, I. K., May 13 2011, XII International Workshop on Fire Blight. International Society for Horticultural Science, p. 195-202 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

environmental law
Erwinia amylovora
regulator genes
biosynthesis
temperature

Smoothing spline mixed effects modeling of multifactorial gene expression profiles

Smith, B. J., Southey, B. R. & Rodriguez-Zas, S. L., Dec 1 2007, Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2007. p. 325-330 6 p. 4413073. (Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2007).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transcriptome
Gene expression
Splines
Microarrays
Honey

Spatial variability of the Illinois Soil Nitrogen Test: Implications for soil sampling

Ruffo, M. L., Bollero, G. A. & Bullock, D. G., 2005, Precision Agriculture 2005. p. 751-757 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

soil sampling
nitrogen
soil
testing
Zea mays

Stalk strength and sugar content of different dual-purpose sorghum lines

Chen, S. F., Brown, P. J. & Danao, M-G., Jan 1 2013, American Society of Agricultural and Biological Engineers Annual International Meeting 2013, ASABE 2013. American Society of Agricultural and Biological Engineers, p. 2437-2450 14 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2013, ASABE 2013; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Sugar (sucrose)
Sugars
sugar content
Glucose
Sucrose

Stereovision system and image processing algorithms for plant specific application

Jeon, H. Y., Tian, L., Grift, T., Bode, L. & Hager, A., Dec 1 2009, American Society of Agricultural and Biological Engineers Annual International Meeting 2009, ASABE 2009. p. 147-170 24 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2009, ASABE 2009; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

image analysis
neural networks
Soil
Lighting
lighting

Stress induces biphasic-rewiring and modularization patterns in the metabolomic networks of Escherichia coli

Aziz, M. F., Chan, P., Osorio, J. S., Minhas, B. F., Parekatt, V. & Caetano-Anolles, G., Dec 1 2012, Proceedings - 2012 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2012. p. 593-597 5 p. 6392626. (Proceedings - 2012 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Metabolomics
Metabolites
Escherichia coli
Metabolism
Proteome

The effect of nozzle type and deposition aid on herbicide efficacy and droplet size

Bretthauer, S. M., Wolf, R. E., Hager, A. G. & Fritz, B. K., Jan 1 2011, American Society of Agricultural and Biological Engineers Annual International Meeting 2011, ASABE 2011. American Society of Agricultural and Biological Engineers, p. 2776-2781 6 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2011, ASABE 2011; vol. 4).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

droplet size
nozzles
herbicides
weed control
fan nozzles

The functional make up of proteomes is remarkably conserved

Nasir, A., Naeem, A., Khan, M. J., Lopez-Nicora, H. D. & Caetano-Anolles, G., 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 1023-1025 3 p. 6112546

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Proteome
Proteins
Genome
Genes
Protein Domains

Transcriptome analysis of apple blossom after challenging with fire blight pathogen Erwinia amylovora wild type and mutant strains

Sarowar, S., Wang, D. P., Zhao, Y. F., Zheng, D. M., Guerra, R. E. & Korban, S. S., May 13 2011, XII International Workshop on Fire Blight. Sobiczewski, P., Pulawska, J. & Kaluzna, M. (eds.). p. 245-252 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Erwinia amylovora
transcriptomics
apples
type III secretion system
mutants

Transcriptomic analysis by RNA-Seq and gene enrichment analysis

Nixon, S. E., González-Peña, D., Lawson, M. A., McCusker, R. H., O'Connor, J. C., Dantzer, R., Kelley, K. W. & Rodriguez-Zas, S. L., Jan 1 2014, Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014. International Society for Computers and Their Applications, p. 27-31 5 p. (Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

RNA
Genes
Gene Expression Profiling
Binomial Distribution
Biological Phenomena

Understanding phosphorus transport through tile drains utilizing descriptive Statistics

Bailey, B. S., Christianson, L. E. & Cooke, R. A. C., Jan 1 2016, 10th International Drainage Symposium 2016. American Society of Agricultural and Biological Engineers, Vol. 2016-January. p. 108-115 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

tile drain
phosphorus
statistics
drainage
runoff