Research Output

Filter
Conference contribution
2019

Fate and Transport of Manure Estrogenic Compounds During Integrated Treatment for Water Quality and Bioenergy Production

Schideman, L., Shin, Y. H., Plewa, M., Zhang, P., Scott, J. & Zhang, Y., May 1 2019, 2019 Emerging Contaminants in the Environment Conference (ECEC19).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Improving yield mapping accuracy using remote sensing

Gonçalves Trevisan, R., Shiratsuchi, L. S., Bullock, D. S. & Martin, N. F., Jan 1 2019, Precision Agriculture 2019 - Papers Presented at the 12th European Conference on Precision Agriculture, ECPA 2019. Stafford, J. V. (ed.). Wageningen Academic Publishers, p. 901-908 8 p. (Precision Agriculture 2019 - Papers Presented at the 12th European Conference on Precision Agriculture, ECPA 2019).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Site-specific treatment responses in on-farm precision experimentation

Trevisan, R. G., Bullock, D. S. & Martin, N. F., Jan 1 2019, Precision Agriculture 2019 - Papers Presented at the 12th European Conference on Precision Agriculture, ECPA 2019. Stafford, J. V. (ed.). Wageningen Academic Publishers, p. 925-931 7 p. (Precision Agriculture 2019 - Papers Presented at the 12th European Conference on Precision Agriculture, ECPA 2019).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2016

A spatially explicit, agent-based model for simulating movements of cattle grazing corn residues

Liu, T., Rodriguez, L. F., Lehman, B. E., Miller, A. R., Villamil, M. B. & Shike, D. W., Jan 1 2016, 2016 American Society of Agricultural and Biological Engineers Annual International Meeting, ASABE 2016. American Society of Agricultural and Biological Engineers, (2016 American Society of Agricultural and Biological Engineers Annual International Meeting, ASABE 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computational agroecology: Sustainable food ecosystem design

Raghavan, B., Nardi, B., Lovell, S. T., Norton, J., Tomlinson, B. & Patterson, D. J., May 7 2016, CHI EA 2016: #chi4good - Extended Abstracts, 34th Annual CHI Conference on Human Factors in Computing Systems. Association for Computing Machinery, p. 423-435 13 p. (Conference on Human Factors in Computing Systems - Proceedings; vol. 07-12-May-2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Performance of denitrification beds for removing nitrate from drainage water at cold temperatures

Ghane, E., Feyereisen, G. W., Rosen, C. J., Sadowsky, M. J. & Christianson, L. E., Jan 1 2016, 10th International Drainage Symposium 2016. American Society of Agricultural and Biological Engineers, p. 236-239 4 p. (10th International Drainage Symposium 2016; vol. 2016-January).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Understanding phosphorus transport through tile drains utilizing descriptive Statistics

Bailey, B. S., Christianson, L. & Cooke, R., Jan 1 2016, 10th International Drainage Symposium 2016. American Society of Agricultural and Biological Engineers, p. 108-115 8 p. (10th International Drainage Symposium 2016; vol. 2016-January).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2015

Understanding the spatial heterogeneity of cattle locations and its effects on subsequent crop yield in an integrated corn-cattle system

Liu, T., Rodriguez, L. F., Villamil, M. B., Miller, A. R., Lehman, B. & Shike, D. W., Jan 1 2015, American Society of Agricultural and Biological Engineers Annual International Meeting 2015. American Society of Agricultural and Biological Engineers, p. 4496-4505 10 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2015; vol. 6).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2014

Advanced statistical analysis of RNA-Seq differential gene expression profiles of animal gene-environment interactions

Caetano-Anollés, K., Nixon, S., Mishra, S. & Rodriguez-Zas, S. L., Jan 1 2014, Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014. International Society for Computers and Their Applications, p. 43-47 5 p. (Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Evaluation of significance level assignment of database search programs using monte carlo permutation approach

Akhtar, M. N., Southey, B. R., Andrén, P. E., Sweedler, J. V. & Rodriguez-Zas, S. L., Jan 1 2014, Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014. International Society for Computers and Their Applications, p. 103-107 5 p. (Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Impact of bias correction methods and increasing the biological samples in transcriptomic analysis

González-Peña, D., Nixon, S. E., Southey, B. R., Lawson, M. A., McCusker, R. H., Dantzer, R., Kelley, K. W. & Rodriguez-Zas, S. L., Jan 1 2014, Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014. International Society for Computers and Their Applications, p. 115-118 4 p. (Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Prediction of starch content and ethanol yields of sorghum grain using near infrared spectroscopy

Li, J., Chen, S. F., Li, S., Singh, V., Brown, P. J. & Danao, M. G. C., Jan 1 2014, American Society of Agricultural and Biological Engineers Annual International Meeting 2014, ASABE 2014. American Society of Agricultural and Biological Engineers, p. 1020-1028 9 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2014, ASABE 2014; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transcriptomic analysis by RNA-Seq and gene enrichment analysis

Nixon, S. E., González-Peña, D., Lawson, M. A., McCusker, R. H., O'Connor, J. C., Dantzer, R., Kelley, K. W. & Rodriguez-Zas, S. L., Jan 1 2014, Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014. International Society for Computers and Their Applications, p. 27-31 5 p. (Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Understanding the impact of fractionation and dynamic exclusion on proteomics

Zavala, C., Nixon, S., Southey, B. R., Wu, C., Romanova, E. V., Sweedler, J. V. & Rodriguez-Zas, S. L., Jan 1 2014, Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014. International Society for Computers and Their Applications, p. 93-96 4 p. (Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2013

Stalk strength and sugar content of different dual-purpose sorghum lines

Chen, S. F., Brown, P. J. & Danao, M-G., Jan 1 2013, American Society of Agricultural and Biological Engineers Annual International Meeting 2013, ASABE 2013. American Society of Agricultural and Biological Engineers, p. 2437-2450 14 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2013, ASABE 2013; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2012

Application of SWAT to a tile drained watershed in East-Central Illinois

Kent, G. W., Rodriguez, L. F., Cooke, R. A. C. & Czapar, G. F., Jan 1 2012, American Society of Agricultural and Biological Engineers Annual International Meeting 2012, ASABE 2012. American Society of Agricultural and Biological Engineers, p. 1057-1075 19 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2012, ASABE 2012; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A system to evaluate prime farmland reclamation success based on spatial soil properties

Dunker, R. E., Bullock, D. G., Bollero, G. A. & Armstrong, K. L., Jan 1 2012, 29th Annual National Conference of the American Society of Mining and Reclamation 2012, ASMR 2012. American Society of Mining and Reclamation, p. 103-132 30 p. (29th Annual National Conference of the American Society of Mining and Reclamation 2012, ASMR 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Rootstock tolerance to apple replant disease for improved sustainability of apple production

Robinson, T., Autio, W., Clements, J., Cowgill, W., Embree, C., Gonzalez, V., Hoying, S., Kushad, M., Parker, M., Parra, R. & Schupp, J., Dec 14 2012, XXVIII International Horticultural Congress on Science and Horticulture for People (IHC2010): International Symposium on the Challenge for a Sustainable Production, Protection and Consumption of Medit. International Society for Horticultural Science, p. 521-528 8 p. (Acta Horticulturae; vol. 940).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Stress induces biphasic-rewiring and modularization patterns in the metabolomic networks of Escherichia coli

Aziz, M. F., Chan, P., Osorio, J. S., Minhas, B. F., Parekatt, V. & Caetano-Anollés, G., Dec 1 2012, Proceedings - 2012 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2012. p. 593-597 5 p. 6392626. (Proceedings - 2012 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2011

Additive and multiplicative genome-wide association models identify genes associated with growth

Zavala, C., Serao, N., Villamil, M. B., Caetano-Anolles, G. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 975-977 3 p. 6112527. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Comparative analysis of the RcsC sensor kinase from Erwinia amylovora and other enterobacteria

Wang, D. P., Zhao, Y. F. & Korban, S. S., May 13 2011, XII International Workshop on Fire Blight. Sobiczewski, P., Pulawska, J. & Kaluzna, M. (eds.). p. 165-172 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Comparison of tandem mass spectrometry search methods to identify neuropeptides

Akhtar, M. N., Southey, B. R., Porter, K. I., Sweedler, J. V. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 982-984 3 p. 6112530. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Evolution and function of flagellar and non-flagellar type III secretion systems in Erwinia amylovora

Zhao, Y. F., Qi, M. S. & Wang, D. P., May 13 2011, XII International Workshop on Fire Blight. International Society for Horticultural Science, p. 177-184 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Evolution of protein architectures inferred from phylogenomic analysis of CATH

Bukhari, S. A. & Caetano-Anollés, G., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 1029-1031 3 p. 6112548. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Hierarchical modeling of alternative exon usage associations with survival

Sadeque, A., Serão, N. V. L., Southey, B. R., Fazal, Z. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 978-980 3 p. 6112528. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Important fungal diseases of tomato in the United States of America

Babadoost, M., Nov 25 2011, III International Symposium on Tomato Diseases. International Society for Horticultural Science, p. 85-92 8 p. (Acta Horticulturae; vol. 914).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Integration of polygenic and individual SNP effects in genome-wide association analyses

Serão, N. V. L., Beever, J. E., Faulkner, D. B. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 985-987 3 p. 6112531. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Integration of sequence and functional information to identify and annotate neuropeptides in the pig genome

Porter, K. I., Southey, B. R., Akhtar, M. N., Sweedler, J. V. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 988-990 3 p. 6112532. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Integration of statistical models and visualization tools to characterize microRNA networks influencing cancer

Karnia, J., Delfino, K. R., Villamil, M. B., Caetano-Anolles, G. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 1009-1011 3 p. 6112541. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Integration of statistical models and visualization tools to characterize microRNA networks influencing cancer

Delfino, K. R. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 969-971 3 p. 6112523. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Leaf mold (Fulvia fulva), a serious threat to high tunnel tomato production in Illinois

Babadoost, M., Nov 25 2011, III International Symposium on Tomato Diseases. International Society for Horticultural Science, p. 93-96 4 p. (Acta Horticulturae; vol. 914).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Microarray characterization of the hrpl regulon of the fire blight pathogen Erwinia amylovora

McNally, R. R., Sundin, G. W., Toth, I. K., Cock, P. J. A., Hedley, P. E. & Zhao, Y. F., May 13 2011, XII International Workshop on Fire Blight. International Society for Horticultural Science, p. 263-270 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Model of ion intensity from tandem mass spectra for improved peptide identification and simulation

Fazal, Z., Southey, B. R., Sadeque, A., Sweedler, J. V. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 994-996 3 p. 6112534. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Performance of 'Gala' apple trees on supporter 4 and different strains of B.9, M.9, and M.26 rootstocks as Part of the 2002 NC-140 apple rootstock trial

Autio, W., Robinson, T. L., Cowgill, W., Hampson, C., Kushad, M., Lang, G., Masabni, J., Miller, D. D., Parra-Quezada, R. A., Perry, R. & Rom, C., Aug 1 2011, IX International Symposium on Integrating Canopy, Rootstock and Environmental Physiology in Orchard Systems. International Society for Horticultural Science, p. 311-318 8 p. (Acta Horticulturae; vol. 903).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Regulatory genes and environmental regulation of amylovoran biosynthesis in Erwinia amylovora

Wang, D. P., Clough, S. J., Zhao, Y. F., Sundin, G. W., Korban, S. S. & Toth, I. K., May 13 2011, XII International Workshop on Fire Blight. International Society for Horticultural Science, p. 195-202 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The effect of nozzle type and deposition aid on herbicide efficacy and droplet size

Bretthauer, S. M., Wolf, R. E., Hager, A. G. & Fritz, B. K., Jan 1 2011, American Society of Agricultural and Biological Engineers Annual International Meeting 2011, ASABE 2011. American Society of Agricultural and Biological Engineers, p. 2776-2781 6 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2011, ASABE 2011; vol. 4).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The functional make up of proteomes is remarkably conserved

Nasir, A., Naeem, A., Khan, M. J., Lopez-Nicora, H. D. & Caetano-Anolles, G., 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 1023-1025 3 p. 6112546

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transcriptome analysis of apple blossom after challenging with fire blight pathogen Erwinia amylovora wild type and mutant strains

Sarowar, S., Wang, D. P., Zhao, Y. F., Zheng, D. M., Guerra, R. E. & Korban, S. S., May 13 2011, XII International Workshop on Fire Blight. Sobiczewski, P., Pulawska, J. & Kaluzna, M. (eds.). p. 245-252 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Using photonic crystal enhanced fluorescence on quartz substrates to improve the sensitivity of DNA microarrays

George, S., Pokhriyal, A., Jones, S. I., Lu, M., Vodkin, L. O. & Cunningham, B. T., Dec 26 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 26-29 4 p. 6089888. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2010

Identification and quantification of phenolic compounds in grapes

Rivera-Dominguez, M., Wlodarchak, N., Kushad, M. & Yahia, E. M., Nov 11 2010, Acta Horticulturae. International Society for Horticultural Science, p. 1233-1240 8 p. (Acta Horticulturae; vol. 877).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Integrated approaches for management of Phytophthora blight (Phytophthora capsici) of cucurbits

Babadoost, M., Pavon, C. & Thruppoyil, S. B., Aug 31 2010, Acta Horticulturae. International Society for Horticultural Science, p. 527-534 8 p. (Acta Horticulturae; vol. 871).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2009

Detecting soybean rust severity in terms of multispectral images

Cui, D., Li, M., Zhang, Q., Hartman, G. L. & Zhao, Y., Dec 1 2009, American Society of Agricultural and Biological Engineers Annual International Meeting 2009, ASABE 2009. p. 1327-1342 16 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2009, ASABE 2009; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Enhancing DNA microarray detection limits using optical resonances from photonic crystal surfaces

Mathias, P. C., Jones, S. I., Gonzalez, D. O., Vodkin, L. O. & Cunningham, B. T., Dec 11 2009, TRANSDUCERS 2009 - 15th International Conference on Solid-State Sensors, Actuators and Microsystems. p. 730-733 4 p. 5285438. (TRANSDUCERS 2009 - 15th International Conference on Solid-State Sensors, Actuators and Microsystems).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Plant specific direct chemical application field robot

Jeon, H. Y., Tian, L., Bode, L., Grift, T. E. & Hager, A. G., Dec 1 2009, American Society of Agricultural and Biological Engineers Annual International Meeting 2009, ASABE 2009. p. 692-711 20 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2009, ASABE 2009; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Stereovision system and image processing algorithms for plant specific application

Jeon, H. Y., Tian, L., Grift, T., Bode, L. & Hager, A., Dec 1 2009, American Society of Agricultural and Biological Engineers Annual International Meeting 2009, ASABE 2009. p. 147-170 24 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2009, ASABE 2009; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Utilizing toxicity information for UV disinfection technology implementation

Kashinkunti, R. D., Metz, D. H., Jamriska, K. J., Meyer, M., Plewa, M. J. & Wagner, E. D., Dec 1 2009, Water Quality Technology Conference and Exposition 2009. p. 3914-3920 7 p. (Water Quality Technology Conference and Exposition 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2008

Comparative cytotoxicity and genotoxicity of priority DBPs

Plewa, M. J., Dec 1 2008, American Water Works Association - American Water Works Association Association Annual Conference and Exposition, ACE 2008. (American Water Works Association - American Water Works Association Association Annual Conference and Exposition, ACE 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Comparative mammalian cell toxicity of N-DBPs and C-DBPs

Plewa, M. J., Wagner, E. D., Muellner, M. G., Hsu, K. M. & Richardson, S. D., Aug 5 2008, Disinfection By-Products in Drinking Water: Occurrence, Formation, Health Effects, and Control. American Chemical Society, p. 36-50 15 p. (ACS Symposium Series; vol. 995).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2007

Comparative analysis of binary logistic regression to artificial neural networks in predicting precursor sequence cleavage

Tegge, A., Rodriguez-Zas, S., Sweedler, J. V. & Southey, B., Dec 1 2007, Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW. p. 101-108 8 p. 4425407. (Proceedings - 2007 IEEE International Conference on Bioinformaticsand Biomedicine Workshops, BIBMW).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Enhanced prediction of cleavage in bovine precursor sequences

Tegge, A. N., Rodriguez-Zas, S. L., Sweedler, J. V. & Southey, B. R., Aug 3 2007, Bioinformatics Research and Applications - Third International Symposium, ISBRA 2007, Proceedings. p. 350-360 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4463 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution