Research Output 1971 2019

2018

Tembotrione detoxification in 4-hydroxyphenylpyruvate dioxygenase (HPPD) inhibitor-resistant Palmer amaranth (Amaranthus palmeri S. Wats.)

Küpper, A., Peter, F., Zöllner, P., Lorentz, L., Tranel, P. J., Beffa, R. & Gaines, T. A., Oct 2018, In : Pest Management Science. 74, 10, p. 2325-2334 10 p.

Research output: Contribution to journalArticle

tembotrione
Amaranthus palmeri
herbicides
hydroxylation
metabolism

Temperate agroforestry research: considering multifunctional woody polycultures and the design of long-term field trials

Lovell, S. T., Dupraz, C., Gold, M., Jose, S., Revord, R., Stanek, E. & Wolz, K. J., Oct 1 2018, In : Agroforestry Systems. 92, 5, p. 1397-1415 19 p.

Research output: Contribution to journalReview article

polyculture
agroforestry
field experimentation
woody plant
woody plants

The adaptive capacity of maize-based conservation agriculture systems to climate stress in tropical and subtropical environments: A meta-regression of yields

Steward, P. R., Dougill, A. J., Thierfelder, C., Pittelkow, C. M., Stringer, L. C., Kudzala, M. & Shackelford, G. E., Jan 1 2018, In : Agriculture, Ecosystems and Environment. 251, p. 194-202 9 p.

Research output: Contribution to journalArticle

maize
agriculture
climate
corn
heat stress

The impact of disinfection Ct values on cytotoxicity of agricultural wastewaters: Ozonation vs. chlorination

Dong, S., Massalha, N., Plewa, M. J. & Nguyen, T. H., Nov 1 2018, In : Water Research. 144, p. 482-490 9 p.

Research output: Contribution to journalArticle

Ozonization
Disinfection
Chlorination
Cytotoxicity
chlorination

The impacts of fluctuating light on crop performance

Slattery, R. A., Walker, B. J., Weber, A. P. M. & Ort, D. R., Feb 2018, In : Plant physiology. 176, 2, p. 990-1003 14 p.

Research output: Contribution to journalArticle

Light
Photosynthesis
crops
canopy
C4 photosynthesis

The important but weakening maize yield benefit of grain filling prolongation in the US Midwest

Zhu, P., Jin, Z., Zhuang, Q., Ciais, P., Bernacchi, C., Wang, X., Makowski, D. & Lobell, D., Jan 1 2018, (Accepted/In press) In : Global Change Biology.

Research output: Contribution to journalArticle

maize
food security
Crops
Drought
crop yield

The performance of early-generation perennial winter cereals at 21 sites across four continents

Hayes, R. C., Wang, S., Newell, M. T., Turner, K., Larsen, J., Gazza, L., Anderson, J. A., Bell, L. W., Cattani, D. J., Frels, K., Galassi, E., Morgounov, A. I., Revell, C. K., Thapa, D. B., Sacks, E. J., Sameri, M., Wade, L. J., Westerbergh, A., Shamanin, V., Amanov, A. & 1 others, Li, G. D., Apr 9 2018, In : Sustainability (Switzerland). 10, 4, 1124.

Research output: Contribution to journalArticle

cereal
wheat
breeding
parents
winter

The power and potential of genomics in weed biology and management

Ravet, K., Patterson, E. L., Krähmer, H., Hamouzová, K., Fan, L., Jasieniuk, M., Lawton-Rauh, A., Malone, J. M., McElroy, J. S., Merotto, A., Westra, P., Preston, C., Vila-Aiub, M. M., Busi, R., Tranel, P. J., Reinhardt, C., Saski, C., Beffa, R., Neve, P. & Gaines, T. A., Oct 2018, In : Pest Management Science. 74, 10, p. 2216-2225 10 p.

Research output: Contribution to journalArticle

weed biology
weed control
weeds
genomics
genome

Thiol Reactivity Analyses to Predict Mammalian Cell Cytotoxicity of Water Samples

Dong, S., Page, M. A., Wagner, E. D. & Plewa, M. J., Aug 7 2018, In : Environmental Science and Technology. 52, 15, p. 8822-8829 8 p.

Research output: Contribution to journalArticle

thiol
Cytotoxicity
Sulfhydryl Compounds
Cells
Water

Tillage and fertilizer management effects on phosphorus runoff from minimal slope fields

Yuan, M., Fernández, F. G., Pittelkow, C. M., Greer, K. D. & Schaefer, D., May 1 2018, In : Journal of Environmental Quality. 47, 3, p. 462-470 9 p.

Research output: Contribution to journalArticle

Fertilizers
Runoff
tillage
Phosphorus
fertilizer
Manihot
cassava
Photosynthesis
Carboxylation
cultivar

Transcriptional and small RNA responses of the white mold fungus sclerotinia sclerotiorum to infection by a virulence-attenuating hypovirus

Marzano, S. Y. L., Neupane, A. & Domier, L. L., Dec 2018, In : Viruses. 10, 12, 713.

Research output: Contribution to journalArticle

Ascomycota
Virulence
Fungi
RNA
Messenger RNA

Transcriptomic analysis of transgressive segregants revealed the central role of photosynthetic capacity and efficiency in biomass accumulation in sugarcane

Singh, R., Jones, T., Wai, C. M., Jifon, J., Nagai, C., Ming, R. R. & Yu, Q., Dec 1 2018, In : Scientific reports. 8, 1, 4415.

Research output: Contribution to journalArticle

transcriptomics
sugarcane
biomass production
biomass
energy

Two colors, one species: The case of melissodes nigroaenea (Apidae: Eucerini), an important pollinator of cotton fields in Brazil

Grando, C., Amon, N. D., Clough, S. J., Guo, N., Wei, W., Azevedo, P., López-Uribe, M. M. & Zucchi, M. I., Oct 2018, In : Sociobiology. 65, 4, p. 645-653 9 p.

Research output: Contribution to journalArticle

Melissodes
Apidae
pollinating insects
cotton
Brazil

Unique Flavanol-Anthocyanin Condensed Forms in Apache Red Purple Corn

Chatham, L. A., West, L., Berhow, M. A., Vermillion, K. E. & Juvik, J. A., Oct 17 2018, In : Journal of Agricultural and Food Chemistry. 66, 41, p. 10844-10854 11 p.

Research output: Contribution to journalArticle

Anthocyanins
flavanols
Zea mays
anthocyanins
pelargonidin

Uptake of elemental or sulfate-S from fall- or spring-applied co-granulated fertilizer by corn—A stable isotope and modeling study

Degryse, F., da Silva, R. C., Baird, R., Beyrer, T., Below, F. E. & McLaughlin, M. J., May 15 2018, In : Field Crops Research. 221, p. 322-332 11 p.

Research output: Contribution to journalArticle

stable isotopes
sulfates
stable isotope
fertilizer
fertilizers

Use of in vitro kernel culture to study maize nitrogen and carbohydrate metabolism

Seebauer, J. R. & Below, F. E., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 3-13 11 p. (Methods in Molecular Biology; vol. 1676).

Research output: Chapter in Book/Report/Conference proceedingChapter

Carbohydrate Metabolism
Zea mays
Nitrogen
Growth
Ear

Variable selection in omics data: A practical evaluation of small sample sizes

Kirpich, A., Ainsworth, E., Wedow, J. M., Newman, J. R. B., Michailidis, G. & McIntyre, L. M., Jun 2018, In : PloS one. 13, 6, e0197910.

Research output: Contribution to journalArticle

Analysis of variance (ANOVA)
Sample Size
Analysis of Variance
analysis of variance
Biomarkers

Weed interference with no-till soyabeans influenced by fine-scale covariation between soil properties and cover crop performance

Eslami, S. V. & Davis, A., Dec 2018, In : Weed Research. 58, 6, p. 463-474 12 p.

Research output: Contribution to journalArticle

crop performance
cover crop
soil cover
cover crops
no-tillage

Widespread occurrence of quinone outside inhibitor fungicide-resistant isolates of cercospora sojina, causal agent of frogeye leaf spot of soybean, in the United States

Zhang, G., Allen, T. W., Bond, J. P., Fakhoury, A. M., Dorrance, A. E., Weber, L., Faske, T. R., Giesler, L. J., Hershman, D. E., Kennedy, B. S., Neves, D. L., Hollier, C. A., Kelly, H. M., Newman, M. A., Kleczewski, N. M., Koenning, S. R., Thiessen, L. D., Mehl, H. L., Zhou, T., Meyer, M. D. & 9 others, Mueller, D. S., Kandel, Y. R., Price, P. P., Rupe, J. C., Sikora, E. J., Standish, J. R., Tomaso-Peterson, M., Wise, K. A. & Bradley, C. A., Jan 1 2018, In : Plant Health Progress. 19, 4, p. 295-302 8 p.

Research output: Contribution to journalArticle

Cercospora sojina
frogeye leaf spot
quinones
fungicides
soybeans

Winter legume-rice rotations can reduce nitrogen pollution and carbon footprint while maintaining net ecosystem economic benefits

Cai, S., Pittelkow, C. M., Zhao, X. & Wang, S., Sep 10 2018, In : Journal of Cleaner Production. 195, p. 289-300 12 p.

Research output: Contribution to journalArticle

Carbon footprint
carbon footprint
Ecosystems
Pollution
rice

Woodchip bioreactors as treatment for recirculating aquaculture systems’ wastewater: A cost assessment of nitrogen removal

Lepine, C., Christianson, L. E., Davidson, J. & Summerfelt, S., Nov 2018, In : Aquacultural Engineering. 83, p. 85-92 8 p.

Research output: Contribution to journalArticle

aquaculture system
recirculating aquaculture systems
wood chips
bioreactors
bioreactor

Yields and yield stability of no-till and chisel-plow fields in the Midwestern US Corn Belt

Daigh, A. L. M., Dick, W. A., Helmers, M. J., Lal, R., Lauer, J. G., Nafziger, E. D., Pederson, C. H., Strock, J., Villamil, M. B., Mukherjee, A. & Cruse, R., Apr 1 2018, In : Field Crops Research. 218, p. 243-253 11 p.

Research output: Contribution to journalArticle

Corn Belt region
plows
no-tillage
maize
corn

Yield stability differs in commercial maize hybrids in response to changes in plant density, nitrogen fertility, and environment

Mastrodomenico, A. T., Haegele, J. W., Seebauer, J. R. & Below, F. E., Jan 1 2018, In : Crop Science. 58, 1, p. 230-241 12 p.

Research output: Contribution to journalArticle

plant density
corn
nitrogen
nitrogen fertilizers
genotype-environment interaction
2017

Accessions of perennial Glycine species with resistance to multiple types of soybean cyst nematode (Heterodera glycines)

Wen, L., Yuan, C., Herman, T. K. & Hartman, G. L., Jul 2017, In : Plant disease. 101, 7, p. 1201-1206 6 p.

Research output: Contribution to journalArticle

Glycine (Fabaceae)
Heterodera glycines
introduced plants
Tomentella
soybeans

A comparative genome analysis of Cercospora sojina with other members of the pathogen genus Mycosphaerella on different plant hosts

Zeng, F., Lian, X., Zhang, G., Yu, X., Bradley, C. A. & Ming, R. R., Sep 2017, In : Genomics Data. 13, p. 54-63 10 p.

Research output: Contribution to journalArticle

Pathogens
Genes
Genome
Fungi
Virulence

A comparison of genotyping-by-sequencing analysis methods on low-coverage crop datasets shows advantages of a new workflow, GB-eaSy

Wickland, D. P., Battu, G., Hudson, K. A., Diers, B. W. & Hudson, M., Dec 28 2017, In : BMC bioinformatics. 18, 1, 586.

Research output: Contribution to journalArticle

Workflow
Sequencing
Work Flow
Crops
Single Nucleotide Polymorphism

Advancing our understanding of charcoal rot in soybeans

Luna, M. P. R., Mueller, D., Mengistu, A., Singh, A. K., Hartman, G. L. & Wise, K. A., Jan 1 2017, In : Journal of Integrated Pest Management. 8, 1, 1 p.

Research output: Contribution to journalArticle

charcoal
soybean
disease control
soybeans
Macrophomina phaseolina

Agronomic evaluation of a high protein allele from PI407788A on chromosome 15 across two soybean backgrounds

Brzostowski, L. F. & Diers, B. W., Nov 1 2017, In : Crop Science. 57, 6, p. 2972-2978 7 p.

Research output: Contribution to journalArticle

soybeans
alleles
chromosomes
proteins
isogenic lines

Allosteric Control of a Plant Receptor Kinase through S-Glutathionylation

Moffett, A. S., Bender, K. W., Huber, S. C. & Shukla, D., Dec 5 2017, In : Biophysical journal. 113, 11, p. 2354-2363 10 p.

Research output: Contribution to journalArticle

Protein S
Protein Kinases
Oxidation-Reduction
Phosphotransferases
Brassinosteroids
dry milling
flaking
coproducts
corn
cultivars

A novel, multiplexed, probe-based quantitative PCR assay for the soybean rootand stem-rot pathogen, Phytophthora sojae, utilizes its transposable element

Haudenshield, J. S., Song, J. Y. & Hartman, G. L., Apr 2017, In : PloS one. 12, 4, e0176567.

Research output: Contribution to journalArticle

Phytophthora
Phytophthora sojae
stem rot
DNA Transposable Elements
Pathogens

Application of visible and near-infrared spectroscopy to classification of Miscanthus species

Jin, X., Chen, X., Xiao, L., Shi, C., Chen, L., Yu, B., Yi, Z., Yoo, J. H., Heo, K., Yu, C. Y., Yamada, T., Sacks, E. J. & Peng, J., Mar 2017, In : PloS one. 12, 4, e0171360.

Research output: Contribution to journalArticle

Miscanthus
Near infrared spectroscopy
Near-Infrared Spectroscopy
near-infrared spectroscopy
Least-Squares Analysis

Applications of genomics in weed science

Gaines, T. A., Tranel, P. J., Fleming, M. B., Patterson, E. L., Küpper, A., Ravet, K., Giacomini, D. A., Gonzalez, S. & Beffa, R., Jan 1 2017, Biology, Physiology and Molecular Biology of Weeds. Jugulam, M. (ed.). CRC Press, p. 185-218 34 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

weed science
Sugar Phosphates
Thymine
Cytosine
Guanine

A public–industry partnership for enhancing corn nitrogen research and datasets: Project description, methodology, and outcomes

Kitchen, N. R., Shanahan, J. F., Ransom, C. J., Bandura, C. J., Bean, G. M., Camberato, J. J., Carter, P. R., Clark, J. D., Ferguson, R. B., Fernández, F. G., Franzen, D. W., Laboski, C. A. M., Nafziger, E. D., Qing, Z., Sawyer, J. E. & Shafer, M., Sep 1 2017, In : Agronomy Journal. 109, 5, p. 2371-2388 18 p.

Research output: Contribution to journalArticle

corn
nitrogen
weather
Land Grant universities
soil

A quantitative assay for Amaranthus palmeri identification

Murphy, B. P., Plewa, D. E., Phillippi, E., Bissonnette, S. M. & Tranel, P. J., Nov 2017, In : Pest Management Science. 73, 11, p. 2221-2224 4 p.

Research output: Contribution to journalArticle

Amaranthus palmeri
assays
Amaranthus
quantitative polymerase chain reaction
Conservation Reserve Program

A realistic meteorological assessment of perennial biofuel crop deployment: a Southern Great Plains perspective

Wagner, M., Wang, M., Miguez-Macho, G., Miller, J., VanLoocke, A., Bagley, J. E., Bernacchi, C. & Georgescu, M., Jun 2017, In : GCB Bioenergy. 9, 6, p. 1024-1041 18 p.

Research output: Contribution to journalArticle

energy crops
Biofuels
biofuel
bioenergy
Crops

A roadmap for improving the representation of photosynthesis in Earth system models

Rogers, A., Medlyn, B. E., Dukes, J. S., Bonan, G., von Caemmerer, S., Dietze, M. C., Kattge, J., Leakey, A. D. B., Mercado, L. M., Niinemets, Ü., Prentice, I. C., Serbin, S. P., Sitch, S., Way, D. A. & Zaehle, S., Jan 1 2017, In : New Phytologist. 213, 1, p. 22-42 21 p.

Research output: Contribution to journalComment/debate

Photosynthesis
photosynthesis
Physiological Phenomena
Vapor Pressure
Carbon Cycle

A soft selective sweep during rapid evolution of gentle behaviour in an Africanized honeybee

Avalos, A., Pan, H., Li, C., Acevedo-Gonzalez, J. P., Rendon, G., Fields, C. J., Brown, P. J., Giray, T., Robinson, G. E., Hudson, M. & Zhang, G., Dec 1 2017, In : Nature communications. 8, 1, 1550.

Research output: Contribution to journalArticle

Puerto Rico
loci
genome
Genes
Genome

Assessing causes of yield gaps in agricultural areas with diversity in climate and soils

Rattalino Edreira, J. I., Mourtzinis, S., Conley, S. P., Roth, A. C., Ciampitti, I. A., Licht, M. A., Kandel, H., Kyveryga, P. M., Lindsey, L. E., Mueller, D. S., Naeve, S. L., Nafziger, E. D., Specht, J. E., Stanley, J., Staton, M. J. & Grassini, P., Dec 15 2017, In : Agricultural and Forest Meteorology. 247, p. 170-180 11 p.

Research output: Contribution to journalArticle

agricultural land
climate
soil
soybean
sowing date

Assessing the potential to decrease the Gulf of Mexico hypoxic zone with Midwest US perennial cellulosic feedstock production

VanLoocke, A., Twine, T. E., Kucharik, C. J. & Bernacchi, C., May 1 2017, In : GCB Bioenergy. 9, 5, p. 858-875 18 p.

Research output: Contribution to journalArticle

Miscanthus
dissolved inorganic nitrogen
feedstocks
Panicum virgatum
Gulf of Mexico

Assessment of the potential for gene flow from transgenic maize (Zea mays L.) to eastern gamagrass (Tripsacum dactyloides L.)

Lee, M. S., Anderson, E. K., Stojšin, D., McPherson, M. A., Baltazar, B., Horak, M. J., de la Fuente, J. M., Wu, K., Crowley, J. H., Rayburn, A. L. & Lee, D., Aug 1 2017, In : Transgenic Research. 26, 4, p. 501-514 14 p.

Research output: Contribution to journalArticle

Tripsacum dactyloides
Gene Flow
Zea mays
gene flow
genetically modified organisms
Climate Change
Photosynthesis
Atmosphere
Biochemistry
biochemistry

Autophosphorylation-based calcium (Ca 2+ ) sensitivity priming and Ca 2+ /calmodulin inhibition of Arabidopsis thaliana Ca 2+ -dependent protein kinase 28 (CPK28)

Bender, K. W., Blackburn, R. K., Monaghan, J., Derbyshire, P., Menke, F. L. H., Zipfel, C., Goshe, M. B., Zielinski, R. E. & Huber, S. C., Mar 10 2017, In : Journal of Biological Chemistry. 292, 10, p. 3988-4002 15 p.

Research output: Contribution to journalArticle

Calmodulin
Arabidopsis
Protein Kinases
Calcium
Phosphotransferases

A vision for incorporating environmental effects into nitrogen management decision support tools for U.S. maize production

Banger, K., Yuan, M., Wang, J., Nafziger, E. D. & Pittelkow, C. M., Jul 28 2017, In : Frontiers in Plant Science. 8, 1270.

Research output: Contribution to journalArticle

crop models
crop production
corn
nitrogen
information management

Bile acid sodium symporter BASS6 can transport glycolate and is involved in photorespiratory metabolism in Arabidopsis thaliana

South, P. F., Walker, B. J., Cavanagh, A. P., Rolland, V., Badger, M. & Ort, D. R., Apr 2017, In : Plant Cell. 29, 4, p. 808-823 16 p.

Research output: Contribution to journalArticle

glycolic acid
symporters
Symporters
photorespiration
bile acids

Biochemical characterization of metabolism-based atrazine resistance in Amaranthus tuberculatus and identification of an expressed GST associated with resistance

Evans, A. F., O'Brien, S. R., Ma, R., Hager, A. G., Riggins, C. W., Lambert, K. N. & Riechers, D. E., Oct 2017, In : Plant Biotechnology Journal. 15, 10, p. 1238-1249 12 p.

Research output: Contribution to journalArticle

Amaranthus tuberculatus
Amaranthus
Atrazine
atrazine
Glutathione Transferase

Biochemical proxies indicate differences in soil C cycling induced by long-term tillage and residue management in a tropical agroecosystem

Margenot, A. J., Pulleman, M. M., Sommer, R., Paul, B. K., Parikh, S. J., Jackson, L. E. & Fonte, S. J., Nov 1 2017, In : Plant and Soil. 420, 1-2, p. 315-329 15 p.

Research output: Contribution to journalArticle

agricultural ecosystem
agroecosystems
soil organic carbon
tillage
organic carbon

Biokinetic Analysis and Metabolic Fate of 2,4-D in 2,4-D-Resistant Soybean (Glycine max)

Skelton, J. J., Simpson, D. M., Peterson, M. A. & Riechers, D. E., Jul 26 2017, In : Journal of Agricultural and Food Chemistry. 65, 29, p. 5847-5859 13 p.

Research output: Contribution to journalArticle

2,4-Dichlorophenoxyacetic Acid
Soybeans
Glycine
2,4-D
Glycine max

Biological P cycling is influenced by the form of P fertilizer in an Oxisol

Margenot, A. J., Sommer, R., Mukalama, J. & Parikh, S. J., Nov 1 2017, In : Biology and Fertility of Soils. 53, 8, p. 899-909 11 p.

Research output: Contribution to journalArticle

phosphate rock
Oxisol
rock phosphate
Fertilizers
Oxisols