Research Output 1975 2020

Article

Bile acid sodium symporter BASS6 can transport glycolate and is involved in photorespiratory metabolism in Arabidopsis thaliana

South, P. F., Walker, B. J., Cavanagh, A. P., Rolland, V., Badger, M. & Ort, D. R., Apr 2017, In : Plant Cell. 29, 4, p. 808-823 16 p.

Research output: Contribution to journalArticle

glycolic acid
symporters
Symporters
photorespiration
bile acids
Acclimatization
Soybeans
Glycine max
acclimation
carbon dioxide

Biochemical and mutagenic characterization of plant‐activated aromatic amines

Plewa, M. J., Gichner, T., Xin, H., Seo, KY. Y., Smith, S. R. & Wagner, E. D., Aug 1993, In : Environmental Toxicology and Chemistry. 12, 8, p. 1353-1363 11 p.

Research output: Contribution to journalArticle

Amines
Chemical activation
Plant Cells
Cultured Cells
Agrochemicals

Biochemical and structural consequences of a glycine deletion in the α-8 helix of protoporphyrinogen oxidase

Dayan, F. E., Daga, P. R., Duke, S. O., Lee, R. M., Tranel, P. J. & Doerksen, R. J., Jul 1 2010, In : Biochimica et Biophysica Acta - Proteins and Proteomics. 1804, 7, p. 1548-1556 9 p.

Research output: Contribution to journalArticle

Protoporphyrinogen Oxidase
Glycine
Herbicides
Herbicide Resistance
Catalytic Domain

Biochemical and transcriptomic analysis of maize diversity to elucidate drivers of leaf carbon isotope composition

Kolbe, A. R., Studer, A. J. & Cousins, A. B., Jan 1 2018, In : Functional Plant Biology. 45, 5, p. 489-500 12 p.

Research output: Contribution to journalArticle

transcriptomics
isotopes
phosphoenolpyruvate carboxylase
carbonate dehydratase
ribulose 1,5-diphosphate

Biochemical characterization of metabolism-based atrazine resistance in Amaranthus tuberculatus and identification of an expressed GST associated with resistance

Evans, A. F., O'Brien, S. R., Ma, R., Hager, A. G., Riggins, C. W., Lambert, K. N. & Riechers, D. E., Oct 2017, In : Plant Biotechnology Journal. 15, 10, p. 1238-1249 12 p.

Research output: Contribution to journalArticle

Amaranthus tuberculatus
Amaranthus
Atrazine
atrazine
Glutathione Transferase

Biochemical proxies indicate differences in soil C cycling induced by long-term tillage and residue management in a tropical agroecosystem

Margenot, A. J., Pulleman, M. M., Sommer, R., Paul, B. K., Parikh, S. J., Jackson, L. E. & Fonte, S. J., Nov 1 2017, In : Plant and Soil. 420, 1-2, p. 315-329 15 p.

Research output: Contribution to journalArticle

agricultural ecosystem
agroecosystems
soil organic carbon
tillage
organic carbon

Biochemical regulation during the mid-day decline of photosynthesis in field-grown sunflower

Wise, R. R., Sparrow, D. H., Ortiz-Lopez, A. & Ort, D. R., 1991, In : Plant Science. 74, 1, p. 45-52 8 p.

Research output: Contribution to journalArticle

Helianthus
Photosynthesis
Helianthus annuus
photosynthesis
leaves

Biocontainer use in a Petunia ×hybrida greenhouse production system: A cradle-to-gate carbon footprint assessment of secondary impacts

Koeser, A. K., Lovell, S. T., Petri, A. C., Brumfield, R. G. & Stewart, J. R., Mar 2014, In : HortScience. 49, 3, p. 265-271 7 p.

Research output: Contribution to journalArticle

carbon footprint
Petunia hybrida
greenhouse production
global warming
containers

Biocontainer water use in short-term greenhouse crop production

Koeser, A., Lovell, S. T., Evans, M. & Stewart, J. R., Apr 1 2013, In : HortTechnology. 23, 2, p. 215-219 5 p.

Research output: Contribution to journalArticle

crop production
containers
greenhouses
plastics
water

Biodegradable plastic and fabric mulch performance in field and high tunnel cucumber production

Wortman, S. E., Kadoma, I. & Crandall, M. D., Apr 2016, In : HortTechnology. 26, 2, p. 148-155 8 p.

Research output: Contribution to journalArticle

biodegradability
cucumbers
plastics
soil
films (materials)

Bioeconomic evaluation of sow longevity and profitability

Rodriguez-Zas, S. L., Southey, B. R., Knox, R. V., Connor, J. F., Lowe, J. F. & Roskamp, B. J., Dec 2003, In : Journal of Animal Science. 81, 12, p. 2915-2922 8 p.

Research output: Contribution to journalArticle

bioeconomics
profitability
sows
genetic lines
herds

Bioenergy yields of several cropping systems in the U.S. corn belt

Nafziger, E. D., Villamil, M. B., Niekamp, J., Iutzi, F. W. & Davis, V. M., Mar 1 2016, In : Agronomy Journal. 108, 2, p. 559-565 7 p.

Research output: Contribution to journalArticle

Corn Belt region
bioenergy
cropping systems
Thlaspi arvense
corn

Biofuels on the landscape: Is "land sharing" preferable to "land sparing"?

Anderson-Teixeira, K. J., Duval, B. D., Long, S. P. & Delucia, E. H., Dec 1 2012, In : Ecological Applications. 22, 8, p. 2035-2048 14 p.

Research output: Contribution to journalArticle

biofuel
bioenergy
ecosystem service
crop
greenhouse gas

Biogeochemical consequences of regional land use change to a biofuel crop in the southeastern United States

Duval, B. D., Hartman, M., Marx, E., Parton, W. J., Long, S. P. & DeLucia, E. H., Dec 1 2015, In : Ecosphere. 6, 12, 265.

Research output: Contribution to journalArticle

energy crops
canes
Southeastern United States
biofuel
land use change

Bioinformatics analysis of transcriptome dynamics during growth in Angus cattle longissimus muscle

Moisá, S. J., Shike, D. W., Graugnard, D. E., Rodriguez-Zas, S. L., Everts, R. E., Lewin, H. A., Faulkner, D. B., Berger, L. L. & Loor, J. J., Jan 1 2013, In : Bioinformatics and Biology Insights. 7, p. 253-270 18 p.

Research output: Contribution to journalArticle

Gene Expression Profiling
Bioinformatics
Computational Biology
Muscle
Genes

Bioinformatics and gene network analyses of the swine mammary gland transcriptome during late gestation

Zhao, W., Shahzad, K., Jiang, M., Graugnard, D. E., Rodriguez-Zas, S. L., Luo, J., Loor, J. J. & Hurley, W. L., Jul 19 2013, In : Bioinformatics and Biology Insights. 7, p. 193-216 24 p.

Research output: Contribution to journalArticle

Interleukin-4 Receptors
Gene Networks
Gene Regulatory Networks
Human Mammary Glands
Bioinformatics

Biokinetic Analysis and Metabolic Fate of 2,4-D in 2,4-D-Resistant Soybean (Glycine max)

Skelton, J. J., Simpson, D. M., Peterson, M. A. & Riechers, D. E., Jul 26 2017, In : Journal of Agricultural and Food Chemistry. 65, 29, p. 5847-5859 13 p.

Research output: Contribution to journalArticle

2,4-Dichlorophenoxyacetic Acid
Soybeans
Glycine
2,4-D
Glycine max

Biolistic transformation, expression, and inheritance of bovine β-casein in soybean (Glycine max)

Maughan, P. J., Philip, R., Cho, M. J., Widholm, J. M. & Vodkin, L. O., Jan 1 1999, In : In Vitro Cellular and Developmental Biology - Plant. 35, 4, p. 344-349 6 p.

Research output: Contribution to journalArticle

Biolistics
biolistics
Caseins
Soybeans
Glycine max

Biological interpretations of transcriptomic profiles in mammalian oocytes and embryos

Rodriguez-Zas, S. L., Schellander, K. & Lewin, H. A., Feb 1 2008, In : Reproduction. 135, 2, p. 129-139 11 p.

Research output: Contribution to journalArticle

Mammalian Embryo
Transcriptome
Oocytes
Embryonic Structures
Biological Phenomena

Biological mechanism for the toxicity of haloacetic acid drinking water disinfection byproducts

Pals, J. A., Ang, J. K., Wagner, E. D. & Plewa, M. J., Jul 1 2011, In : Environmental Science and Technology. 45, 13, p. 5791-5797 7 p.

Research output: Contribution to journalArticle

acid water
Disinfection
Drinking Water
acetic acid
disinfection

Biological P cycling is influenced by the form of P fertilizer in an Oxisol

Margenot, A. J., Sommer, R., Mukalama, J. & Parikh, S. J., Nov 1 2017, In : Biology and Fertility of Soils. 53, 8, p. 899-909 11 p.

Research output: Contribution to journalArticle

phosphate rock
Oxisol
rock phosphate
Fertilizers
Oxisols

Biological significance of low weed population densities on sweet corn

Williams, M. M., Mar 1 2010, In : Agronomy Journal. 102, 2, p. 464-468 5 p.

Research output: Contribution to journalArticle

sweetcorn
ears
population density
weeds
crops

Biomass allocation in old-field annual species grown in elevated CO2 environments: No evidence for optimal partitioning

Bernacchi, C. J., Coleman, J. S., Bazzaz, F. A. & McConnaughay, K. D. M., Nov 13 2000, In : Global change biology. 6, 7, p. 855-863 9 p.

Research output: Contribution to journalArticle

old field
biomass allocation
Biomass
partitioning
Nutrients

Biomass feedstock preprocessing and long-distance transportation logistics

Lin, T., Rodríguez, L. F., Davis, S., Khanna, M., Shastri, Y., Grift, T., Long, S. & Ting, K. C., Jan 1 2016, In : GCB Bioenergy. 8, 1, p. 160-170 11 p.

Research output: Contribution to journalArticle

feedstocks
Feedstocks
Logistics
logistics
Biomass

Biomass production of herbaceous energy crops in the United States: field trial results and yield potential maps from the multiyear regional feedstock partnership

Lee, D. K., Aberle, E., Anderson, E. K., Anderson, W., Baldwin, B. S., Baltensperger, D., Barrett, M., Blumenthal, J., Bonos, S., Bouton, J., Bransby, D. I., Brummer, C., Burks, P. S., Chen, C., Daly, C., Egenolf, J., Farris, R. L., Fike, J. H., Gaussoin, R., Gill, J. R. & 38 others, Gravois, K., Halbleib, M. D., Hale, A., Hanna, W., Harmoney, K., Heaton, E. A., Heiniger, R. W., Hoffman, L., Hong, C. O., Kakani, G., Kallenbach, R., Macoon, B., Medley, J. C., Missaoui, A., Mitchell, R., Moore, K. J., Morrison, J. I., Odvody, G. N., Richwine, J. D., Ogoshi, R., Parrish, J. R., Quinn, L., Richard, E., Rooney, W. L., Rushing, J. B., Schnell, R., Sousek, M., Staggenborg, S. A., Tew, T., Uehara, G., Viands, D. R., Voigt, T., Williams, D., Williams, L., Wilson, L. T., Wycislo, A., Yang, Y. & Owens, V., Oct 2018, In : GCB Bioenergy. 10, 10, p. 698-716 19 p.

Research output: Contribution to journalArticle

energy crop
energy crops
feedstocks
Feedstocks
Crops

Biomass Reducing Potential and Prospective Fungicide Control of a New Leaf Blight of Miscanthus × giganteus Caused by Leptosphaerulina chartarum

Ahonsi, M. O., Ames, K. A., Gray, M. & Bradley, C., Jun 1 2013, In : Bioenergy Research. 6, 2, p. 737-745 9 p.

Research output: Contribution to journalArticle

Leptosphaerulina
Miscanthus giganteus
Fungicides
leaf blight
cyproconazole

Biomass yield and feedstock quality of prairie cordgrass in response to seeding rate, row spacing, and nitrogen fertilization

Guo, J., Thapa, S., Voigt, T. B., Owens, V., Boe, A. & Lee, D., Nov 1 2017, In : Agronomy Journal. 109, 6, p. 2474-2485 12 p.

Research output: Contribution to journalArticle

Spartina pectinata
row spacing
feedstocks
sowing
biomass

Biomass yield in a genetically diverse Miscanthus sinensis germplasm panel evaluated at five locations revealed individuals with exceptional potential

Clark, L. V., Dwiyanti, M. S., Anzoua, K. G., Brummer, J. E., Ghimire, B. K., Głowacka, K., Hall, M., Heo, K., Jin, X., Lipka, A. E., Peng, J., Yamada, T., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Oct 1 2019, In : GCB Bioenergy. 11, 10, p. 1125-1145 21 p.

Research output: Contribution to journalArticle

Open Access
Miscanthus giganteus
Miscanthus sinensis
germplasm
Biomass
biomass

Biorefinery for combined production of jet fuel and ethanol from lipid-producing sugarcane: a techno-economic evaluation

Kumar, D., Long, S. P. & Singh, V., Feb 1 2018, In : GCB Bioenergy. 10, 2, p. 92-107 16 p.

Research output: Contribution to journalArticle

biorefining
Jet fuel
economic analysis
Lipids
sugarcane

Biotechnology and the European corn borer: measuring historical farmer perceptions and adoption of transgenic Bt corn as a pest management strategy.

Pilcher, C. D., Rice, M. E., Higgins, R. A., Steffey, K. L., Hellmich, R. L., Witkowski, J., Calvin, D., Ostlie, K. R. & Gray, M., Oct 2002, In : Journal of economic entomology. 95, 5, p. 878-892 15 p.

Research output: Contribution to journalArticle

Ostrinia nubilalis
pest control
biotechnology
pest management
Bacillus thuringiensis

Biotic stress globally downregulates photosynthesis genes

Bilgin, D. D., Zavala, J. A., Zhu, J., Clough, S. J., Ort, D. R. & Delucia, E. H., Oct 1 2010, In : Plant, Cell and Environment. 33, 10, p. 1597-1613 17 p.

Research output: Contribution to journalArticle

Photosynthesis
biotic stress
Down-Regulation
photosynthesis
Genes

Biphasic patterns of diversification and the emergence of modules

Mittenthal, J., Caetano-Anollés, D. & Caetano-Anollés, G., Dec 1 2012, In : Frontiers in Genetics. 3, AUG, Article 147.

Research output: Contribution to journalArticle

Cellular Structures
Molecular Structure
Embryonic Structures
RNA
Proteins

Bivariate genome-wide association analysis of the growth and intake components of feed efficiency

Serão, N. V. L., González-Peña, D., Beever, J. E., Bollero, G. A., Southey, B. R., Faulkner, D. B. & Rodriguez-Zas, S. L., Jan 1 2013, In : PloS one. 8, 10, p. e78530

Research output: Contribution to journalArticle

Genome-Wide Association Study
Polymorphism
single nucleotide polymorphism
Single Nucleotide Polymorphism
feed conversion

Black cutworm damage and recovery of corn plants: influence of pyrethroid and organophosphate soil insecticide treatments

Oloumi-Sadeghi, H., Levine, E., Steffey, K. L. & Gray, M., Aug 1992, In : Crop Protection. 11, 4, p. 323-328 6 p.

Research output: Contribution to journalArticle

Agrotis ipsilon
organophosphorus compounds
pyrethrins
insecticides
Zea mays

Blocking the plant activation of promutagenic aromatic amines by peroxidase inhibitors.

Plewa, M. J., 1993, In : Basic life sciences. 61, p. 201-217 17 p.

Research output: Contribution to journalArticle

Benzoflavones
Antimutagenic Agents
Potassium Cyanide
Mutagenicity Tests
Ditiocarb

Boiling of simulated tap water: Effect on polar brominated disinfection byproducts, halogen speciation, and cytotoxicity

Pan, Y., Zhang, X., Wagner, E. D., Osiol, J. & Plewa, M. J., Jan 7 2014, In : Environmental Science and Technology. 48, 1, p. 149-156 8 p.

Research output: Contribution to journalArticle

Halogens
Disinfection
halogen
Cytotoxicity
disinfection

Boron and zinc deficiencies and toxicities and their interactions with other nutrients in soybean roots, leaves, and seeds

Pawlowski, M. L., Helfenstein, J., Frossard, E. & Hartman, G. L., Apr 3 2019, In : Journal of Plant Nutrition. 42, 6, p. 634-649 16 p.

Research output: Contribution to journalArticle

Boron
Cotyledon
boron
Soybeans
Zinc

Brain gene expression changes elicited by peripheral vitellogenin knockdown in the honey bee

Wheeler, M. M., Ament, S. A., Rodriguez-Zas, S. L. & Robinson, G. E., Oct 1 2013, In : Insect Molecular Biology. 22, 5, p. 562-573 12 p.

Research output: Contribution to journalArticle

Vitellogenins
Honey
Bees
vitellogenin
honey bees

Brain region-dependent gene networks associated with selective breeding for increased voluntary wheel-running behavior

Zhang, P., Rhodes, J. S., Garland, T., Perez, S. D., Southey, B. R. & Rodriguez-Zas, S. L., Aug 2018, In : PloS one. 13, 8, e0201773.

Research output: Contribution to journalArticle

Gene Regulatory Networks
selection methods
wheels
Running
Brain

Brain transcriptomic analysis in paper wasps identifies genes associated with behaviour across social insect lineages

Toth, A. L., Varala, K., Henshaw, M. T., Rodriguez-Zas, S. L., Hudson, M. E. & Robinson, G. E., Jul 22 2010, In : Proceedings of the Royal Society B: Biological Sciences. 277, 1691, p. 2139-2148 10 p.

Research output: Contribution to journalArticle

Polistes
Wasps
social insect
social insects
wasp

Brassinosteroid and gibberellin control of seedling traits in maize (Zea mays L.)

Hu, S., Sanchez, D. L., Wang, C., Lipka, A. E., Yin, Y., Gardner, C. A. C. & Lübberstedt, T., Oct 2017, In : Plant Science. 263, p. 132-141 10 p.

Research output: Contribution to journalArticle

Brassinosteroids
Gibberellins
brassinosteroids
doubled haploids
Seedlings

Brazilian sugarcane ethanol as an expandable green alternative to crude oil use

Jaiswal, D., De Souza, A. P., Larsen, S., LeBauer, D. S., Miguez, F. E., Sparovek, G., Bollero, G. A., Buckeridge, M. S. & Long, S. P., Nov 1 2017, In : Nature Climate Change. 7, 11, p. 788-792 5 p.

Research output: Contribution to journalArticle

crude oil
ethanol
climate change
animal
food

Breed and age affect baseline immune traits, cortisol, and performance in growing pigs

Sutherland, M. A., Rodriguez-Zas, S. L., Ellis, M. & Salak-Johnson, J. L., 2005, In : Journal of Animal Science. 83, 9, p. 2087-2095 9 p.

Research output: Contribution to journalArticle

cortisol
Hydrocortisone
Swine
breeds
swine

Breeding early maturing European dent maize (Zea mays L.) for improved agronomic performance and resistance against the european corn borer (Ostrinia nubilalis Hb.)

Bohn, M. O., Magg, T., Klein, D. & Melchinger, A. E., 2003, In : Maydica. 48, 3, p. 239-247 9 p.

Research output: Contribution to journalArticle

dent corn
Ostrinia nubilalis
agronomic traits
Zea mays
Breeding

Breeding fhb-resistant soft winter wheat: Progress and prospects

Brown-Guedira, G., Griffey, C., Kolb, F. L., McKendry, A., Murphy, J. P. & Van Sanford, D., Dec 1 2008, In : Cereal Research Communications. 36, SUPPL. 6, p. 31-35 5 p.

Research output: Contribution to journalArticle

Triticum
Breeding
winter wheat
milling quality
baking quality

Breeding for resistance to soybean rust

Hartman, G. L., Miles, M. R. & Frederick, R. D., Jun 1 2005, In : Plant disease. 89, 6, p. 664-666 3 p.

Research output: Contribution to journalArticle

soybean rust
Phakopsora pachyrhizi
soybeans
breeding
fungicides

Breeding progress and preparedness for mass-scale deployment of perennial lignocellulosic biomass crops switchgrass, miscanthus, willow and poplar

Clifton-Brown, J., Harfouche, A., Casler, M. D., Dylan Jones, H., Macalpine, W. J., Murphy-Bokern, D., Smart, L. B., Adler, A., Ashman, C., Awty-Carroll, D., Bastien, C., Bopper, S., Botnari, V., Brancourt-Hulmel, M., Chen, Z., Clark, L. V., Cosentino, S., Dalton, S., Davey, C., Dolstra, O. & 39 others, Donnison, I., Flavell, R., Greef, J., Hanley, S., Hastings, A., Hertzberg, M., Hsu, T. W., Huang, L. S., Iurato, A., Jensen, E., Jin, X., Jørgensen, U., Kiesel, A., Kim, D. S., Liu, J., McCalmont, J. P., McMahon, B. G., Mos, M., Robson, P., Sacks, E. J., Sandu, A., Scalici, G., Schwarz, K., Scordia, D., Shafiei, R., Shield, I., Slavov, G., Stanton, B. J., Swaminathan, K., Taylor, G., Torres, A. F., Trindade, L. M., Tschaplinski, T., Tuskan, G. A., Yamada, T., Yeon Yu, C., Zalesny, R. S., Zong, J. & Lewandowski, I., Jan 2019, In : GCB Bioenergy. 11, 1, p. 118-151 34 p.

Research output: Contribution to journalArticle

Miscanthus
Panicum virgatum
energy crops
Crops
Biomass

Bridging neuropeptidomics and genomics with bioinformatics: Prediction of mammalian neuropeptide prohormone processing

Amare, A., Hummon, A. B., Southey, B. R., Zimmerman, T. A., Rodriguez-Zas, S. L. & Sweedler, J. V., May 1 2006, In : Journal of Proteome Research. 5, 5, p. 1162-1167 6 p.

Research output: Contribution to journalArticle

Bioinformatics
Genomics
Computational Biology
Neuropeptides
Logistic Models

Broadleaf weed management in corn utilizing synergistic postemergence herbicide combinations

Woodyard, A. J., Bollero, G. A. & Riechers, D. E., Oct 1 2009, In : Weed Technology. 23, 4, p. 513-518 6 p.

Research output: Contribution to journalArticle

broadleaf weeds
mesotrione
weed control
bromoxynil
herbicides