Research Output 1971 2019

2018

Biomass production of herbaceous energy crops in the United States: field trial results and yield potential maps from the multiyear regional feedstock partnership

Lee, D. K., Aberle, E., Anderson, E. K., Anderson, W., Baldwin, B. S., Baltensperger, D., Barrett, M., Blumenthal, J., Bonos, S., Bouton, J., Bransby, D. I., Brummer, C., Burks, P. S., Chen, C., Daly, C., Egenolf, J., Farris, R. L., Fike, J. H., Gaussoin, R., Gill, J. R. & 38 others, Gravois, K., Halbleib, M. D., Hale, A., Hanna, W., Harmoney, K., Heaton, E. A., Heiniger, R. W., Hoffman, L., Hong, C. O., Kakani, G., Kallenbach, R., Macoon, B., Medley, J. C., Missaoui, A., Mitchell, R., Moore, K. J., Morrison, J. I., Odvody, G. N., Richwine, J. D., Ogoshi, R., Parrish, J. R., Quinn, L., Richard, E., Rooney, W. L., Rushing, J. B., Schnell, R., Sousek, M., Staggenborg, S. A., Tew, T., Uehara, G., Viands, D. R., Voigt, T., Williams, D., Williams, L., Wilson, L. T., Wycislo, A., Yang, Y. & Owens, V., Oct 2018, In : GCB Bioenergy. 10, 10, p. 698-716 19 p.

Research output: Contribution to journalArticle

energy crop
energy crops
feedstocks
Feedstocks
Crops

Biorefinery for combined production of jet fuel and ethanol from lipid-producing sugarcane: a techno-economic evaluation

Kumar, D., Long, S. P. & Singh, V., Feb 1 2018, In : GCB Bioenergy. 10, 2, p. 92-107 16 p.

Research output: Contribution to journalArticle

biorefining
Jet fuel
economic analysis
Lipids
sugarcane

Brain region-dependent gene networks associated with selective breeding for increased voluntary wheel-running behavior

Zhang, P., Rhodes, J. S., Garland, T., Perez, S. D., Southey, B. R. & Rodriguez-Zas, S. L., Aug 2018, In : PLoS One. 13, 8, e0201773.

Research output: Contribution to journalArticle

Gene Regulatory Networks
selection methods
wheels
Running
Brain

Canopy warming accelerates development in soybean and maize, offsetting the delay in soybean reproductive development by elevated CO2 concentrations

Ruiz-Vera, U. M., Siebers, M. H., Jaiswal, D., Ort, D. R. & Bernacchi, C., Dec 2018, In : Plant Cell and Environment. 41, 12, p. 2806-2820 15 p.

Research output: Contribution to journalArticle

Soybeans
Zea mays
carbon dioxide
canopy
soybeans

Carbon and nitrogen content of soil organic matter and microbial biomass under long-term crop rotation and tillage in Illinois, USA

Zuber, S. M., Behnke, G. D., Nafziger, E. D. & Villamil, M. B., Mar 2018, In : Agriculture (Switzerland). 8, 3, 37.

Research output: Contribution to journalArticle

Biomass
nitrogen content
microbial biomass
tillage
soil organic matter

Carbonic anhydrase mutants in zea mays have altered stomatal responses to environmental signals

Kolbe, A. R., Brutnell, T. P., Cousins, A. B. & Studer, A. J., Jun 2018, In : Plant physiology. 177, 3, p. 980-989 10 p.

Research output: Contribution to journalArticle

Carbonic Anhydrases
carbonate dehydratase
Zea mays
Carbon Monoxide
Photosynthesis

Cellulosic ethanol potential of feedstocks grown on marginal lands

Kim, S. M., Lee, D., Thapa, S., Dien, B. S., Tumbleson, M. E., Rausch, K. D. & Singh, V., Jan 1 2018, In : Transactions of the ASABE. 61, 6, p. 1775-1782 8 p.

Research output: Contribution to journalArticle

Cellulosic ethanol
Ashes
Panicum
bioethanol
feedstocks

Changes in Corn Protein Content During Storage and Their Relationship with Dry Grind Ethanol Production

Ramchandran, D., Hojilla-Evangelista, M. P., Moose, S. P., Rausch, K. D., Tumbleson, M. E. & Singh, V., Jan 1 2018, (Accepted/In press) In : JAOCS, Journal of the American Oil Chemists' Society.

Research output: Contribution to journalArticle

Ethanol
Proteins
Prolamins
Glutens
Fermentation

Changes in Phenolic Acid Content in Maize during Food Product Processing

Butts-Wilmsmeyer, C. J., Mumm, R. H., Rausch, K. D., Kandhola, G., Yana, N. A., Happ, M. M., Ostezan, A., Wasmund, M. & Bohn, M. O., Apr 4 2018, In : Journal of Agricultural and Food Chemistry. 66, 13, p. 3378-3385 8 p.

Research output: Contribution to journalArticle

Food processing
Food Handling
phenolic acids
Zea mays
foods

Characteristics of xanthomonas cucurbitae isolates from pumpkins and survival of the bacterium in pumpkin seeds

Zhang, X. & Babadoost, M., Sep 2018, In : Plant disease. 102, 9, p. 1779-1784 6 p.

Research output: Contribution to journalArticle

Xanthomonas cucurbitae
pumpkins
bacteria
lesions (plant)
seeds

Chlorophyll can be reduced in crop canopies with little penalty to photosynthesis

Walker, B. J., Drewry, D. T., Slattery, R. A., VanLoocke, A., Cho, Y. B. & Ort, D. R., Feb 2018, In : Plant physiology. 176, 2, p. 1215-1232 18 p.

Research output: Contribution to journalArticle

Photosynthesis
Chlorophyll
photosynthesis
canopy
chlorophyll

Chlorotyrosines versus Volatile Byproducts from Chlorine Disinfection during Washing of Spinach and Lettuce

Komaki, Y., Simpson, A. M. A., Choe, J. K., Plewa, M. J. & Mitch, W. A., Aug 21 2018, In : Environmental Science and Technology. 52, 16, p. 9361-9369 9 p.

Research output: Contribution to journalArticle

Disinfection
Chlorine
Washing
disinfection
Byproducts

Chromosome Nomenclature and Cytological Characterization of Sacred Lotus

Meng, Z., Hu, X., Zhang, Z., Li, Z., Lin, Q., Yang, M., Yang, P., Ming, R. R., Yu, Q. & Wang, K., Mar 1 2018, In : Cytogenetic and Genome Research. 153, 4, p. 223-231 9 p.

Research output: Contribution to journalArticle

Nelumbo
Terminology
China
Chromosomes
Cytogenetics

Comparative analysis of homologous sequences of saccharum officinarum and saccharum spontaneum reveals independent polyploidization events

Sharma, A., Song, J., Lin, Q., Singh, R., Ramos, N., Wang, K., Zhang, J., Ming, R. R. & Yu, Q., Sep 25 2018, In : Frontiers in Plant Science. 9, 1414.

Research output: Contribution to journalArticle

Saccharum spontaneum
Saccharum officinarum
sequence homology
Saccharum
bacterial artificial chromosomes

Comparison of chemical, color stability, and phenolic composition from pericarp of nine colored corn unique varieties in a beverage model

Haggard, S., Luna-Vital, D., West, L., Juvik, J. A., Chatham, L., Paulsmeyer, M. & Demejia, E., Mar 2018, In : Food Research International. 105, p. 286-297 12 p.

Research output: Contribution to journalArticle

Beverages
pericarp
beverages
Zea mays
Color

Comparison of the mitochondrial genome sequences of six Annulohypoxylon stygium isolates suggests short fragment insertions as a potential factor leading to larger genomic size

Deng, Y., Hsiang, T., Li, S., Lin, L., Wang, Q., Chen, Q., Xie, B. & Ming, R., Sep 10 2018, In : Frontiers in Microbiology. 9, SEP, 2079.

Research output: Contribution to journalArticle

Mitochondrial Genome
Introns
Intergenic DNA
Genes
Genome

Confronting herbicide resistance with cooperative management

Evans, J. A., Williams, A., Hager, A. G., Mirsky, S. B., Tranel, P. J. & Davis, A. S., Nov 2018, In : Pest Management Science. 74, 11, p. 2424-2431 8 p.

Research output: Contribution to journalArticle

Amaranthus tuberculatus
collaborative management
herbicide resistance
glyphosate
herbicides

Consensus, uncertainties and challenges for perennial bioenergy crops and land use

Whitaker, J., Field, J. L., Bernacchi, C. J., Cerri, C. E. P., Ceulemans, R., Davies, C. A., DeLucia, E. H., Donnison, I. S., McCalmont, J. P., Paustian, K., Rowe, R. L., Smith, P., Thornley, P. & McNamara, N. P., Mar 2018, In : GCB Bioenergy. 10, 3, p. 150-164 15 p.

Research output: Contribution to journalReview article

energy crops
bioenergy
Land use
Crops
Greenhouse gases

Context-dependent and variable effects of endohyphal bacteria on interactions between fungi and seeds

Shaffer, J. P., Zalamea, P. C., Sarmiento, C., Gallery, R. E., Dalling, J. W., Davis, A., Baltrus, D. A. & Arnold, A. E., Dec 2018, In : Fungal Ecology. 36, p. 117-127 11 p.

Research output: Contribution to journalArticle

fungus
seed
bacterium
fungi
bacteria

Conversion of grazed pastures to energy cane as a biofuel feedstock alters the emission of GHGs from soils in Southeastern United States

Gomez-Casanovas, N., DeLucia, N. J., Hudiburg, T. W., Bernacchi, C. & Delucia, E. H., Jan 2018, In : Biomass and Bioenergy. 108, p. 312-322 11 p.

Research output: Contribution to journalArticle

Biofuels
canes
Southeastern United States
feedstocks
biofuels

Copper oxide nanoparticle effects on root growth and hydraulic conductivity of two vegetable crops

Margenot, A. J., Rippner, D. A., Dumlao, M. R., Nezami, S., Green, P. G., Parikh, S. J. & McElrone, A. J., Oct 1 2018, In : Plant and Soil. 431, 1-2, p. 333-345 13 p.

Research output: Contribution to journalArticle

nanoparticles
vegetable crops
hydraulic conductivity
vegetable
oxides

Corylus americana: A valuable genetic resource for developing hazelnuts adapted to the eastern United States

Molnar, T. J., Honig, J. A., Mayberry, A., Revord, R. S., Lovell, S. T., Mehlenbacher, S. A. & Capik, J. M., Jan 1 2018, In : Acta Horticulturae. 1226, p. 115-121 7 p.

Research output: Contribution to journalArticle

Corylus americana
Eastern United States
hazelnuts
genetic resources
nuts

Determinants of virulence and in vitro development colocalize on a genetic map of setosphaeria turcica

Mideros Mora, S. X., Chung, C. L., Wiesner-Hanks, T., Poland, J. A., Wu, D., Fialko, A. A., Turgeon, B. G. & Nelson, R. J., Feb 2018, In : Phytopathology. 108, 2, p. 254-263 10 p.

Research output: Contribution to journalArticle

Setosphaeria turcica
virulence
leaf blight
genes
host-pathogen relationships

Development and applications of chromosome-specific cytogenetic BAC-FISH probes in S. spontaneum

Dong, G., Shen, J., Zhang, Q., Wang, J., Yu, Q., Ming, R. R., Wang, K. & Zhang, J., Feb 26 2018, In : Frontiers in Plant Science. 9, 218.

Research output: Contribution to journalArticle

bacterial artificial chromosomes
Saccharum spontaneum
fluorescence in situ hybridization
cytogenetics
chromosomes

Development of an X-specific marker and identification of YY individuals in spinach

Wadlington, W. H. & Ming, R. R., Sep 1 2018, In : Theoretical and Applied Genetics. 131, 9, p. 1987-1994 8 p.

Research output: Contribution to journalArticle

Spinacia oleracea
spinach
Sex Chromosomes
sex chromosomes
X Chromosome

Differential methylation and expression of HUA1 ortholog in three sex types of papaya

Liu, J., Chatham, L., Aryal, R., Yu, Q. & Ming, R. R., Jul 2018, In : Plant Science. 272, p. 99-106 8 p.

Research output: Contribution to journalArticle

Carica
papayas
methylation
Methylation
gender

Discovery of Anthocyanin Acyltransferase1 (AAT1) in maize using Genotyping-by-sequencing (GBS)

Paulsmeyer, M. N., Brown, P. J. & Juvik, J. A., Nov 1 2018, In : G3: Genes, Genomes, Genetics. 8, 11, p. 3669-3678 10 p.

Research output: Contribution to journalArticle

Anthocyanins
Zea mays
Acylation
Acyltransferases
Chromosomes, Human, Pair 1

Discovery of a seventh Rpp soybean rust resistance locus in soybean accession PI 605823

Childs, S. P., King, Z. R., Walker, D. R., Harris, D. K., Pedley, K. F., Buck, J. W., Boerma, H. R. & Li, Z., Jan 1 2018, In : Theoretical and Applied Genetics. 131, 1, p. 27-41 15 p.

Research output: Contribution to journalArticle

Phakopsora pachyrhizi
soybean rust
Soybeans
soybeans
loci

Dispersal records of the sugarcane aphid, melanaphis sacchari (Zehntner) (Hemiptera: Aphididae), through the Midwest Suction Trap Network

Lagos-Kutz, D., Voegtlin, D., Davis, J. & Hartman, G. L., Sep 2018, In : Florida Entomologist. 101, 3, p. 508-510 3 p.

Research output: Contribution to journalArticle

Melanaphis sacchari
suction traps
Aphididae
aphid
suction

Disruption of microglia histone acetylation and protein pathways in mice exhibiting inflammation-associated depression-like symptoms

Rodriguez-Zas, S. L., Wu, C., Southey, B. R., O'Connor, J. C., Nixon, S. E., Garcia, R., Zavala, C., Lawson, M., McCusker, R. H., Romanova, E. V., Sweedler, J. V., Kelley, K. W. & Dantzer, R., Nov 2018, In : Psychoneuroendocrinology. 97, p. 47-58 12 p.

Research output: Contribution to journalArticle

Microglia
Acetylation
Histones
Depression
Inflammation

Distribution of PPX2 Mutations Conferring PPO-Inhibitor Resistance in Palmer Amaranth Populations of Tennessee

Copeland, J. D., Giacomini, D. A., Tranel, P. J., Montgomery, G. B. & Steckel, L. E., Oct 2018, In : Weed Technology. 32, 5, p. 592-596 5 p.

Research output: Contribution to journalArticle

Amaranthus palmeri
protoporphyrinogen oxidase
mutation
resistance mechanisms
herbicides

Diverse chromosomal locations of quantitative trait loci for tolerance to maize chlorotic mottle virus in five maize populations

Jones, M. W., Penning, B. W., Jamann, T. M., Glaubitz, J. C., Romay, C., Buckler, E. S. & Redinbaugh, M. G., Jun 2018, In : Phytopathology. 108, 6, p. 748-758 11 p.

Research output: Contribution to journalArticle

Maize chlorotic mottle virus
quantitative trait loci
corn
necrosis
Potyviridae

Diversification and independent domestication of Asian and European pears

Wu, J., Wang, Y., Xu, J., Korban, S. S., Fei, Z., Tao, S., Ming, R. R., Tai, S., Khan, A. M., Postman, J. D., Gu, C., Yin, H., Zheng, D., Qi, K., Li, Y., Wang, R., Deng, C. H., Kumar, S., Chagné, D., Li, X. & 19 others, Wu, J., Huang, X., Zhang, H., Xie, Z., Li, X., Zhang, M., Li, Y., Yue, Z., Fang, X., Li, J., Li, L., Jin, C., Qin, M., Zhang, J., Wu, X., Ke, Y., Wang, J., Yang, H. & Zhang, S., Jun 11 2018, In : Genome biology. 19, 1, 77.

Research output: Contribution to journalArticle

Pyrus
domestication
pears
genome
fruit

Dormancy-defense syndromes and tradeoffs between physical and chemical defenses in seeds of pioneer species

Zalamea, P. C., Dalling, J. W., Sarmiento, C., Arnold, A. E., Delevich, C., Berhow, M. A., Ndobegang, A., Gripenberg, S. & Davis, A., Sep 2018, In : Ecology. 99, 9, p. 1988-1998 11 p.

Research output: Contribution to journalArticle

physical defense
pioneer species
chemical defense
dormancy
seed
biochar
Nitrous Oxide
nitrous oxide
Zea mays
Soil

Effect of fusarium head blight management practices on mycotoxin contamination of wheat straw

Bissonnette, K. M., Kolb, F. L., Ames, K. A. & Bradley, C. A., Jun 2018, In : Plant disease. 102, 6, p. 1141-1147 7 p.

Research output: Contribution to journalArticle

Fusarium head blight
wheat straw
mycotoxins
fungicides
straw

Effect of Wheat Cultivar on the Concentration of Fusarium Mycotoxins in Wheat Stems

Bissonnette, K. M., Kolb, F. L., Ames, K. A. & Bradley, C. A., Dec 1 2018, In : Plant Disease. 102, 12, p. 2539-2544 6 p.

Research output: Contribution to journalArticle

Fusarium head blight
deoxynivalenol
mycotoxins
Fusarium
wheat

Effects of pyraclostrobin foliar fungicide, corn hybrid, and harvest timing on stalk health of corn

Shelby, R. J., Villamil, M. B., Ames, K. A. & Bradley, C. A., Jan 1 2018, In : Crop, Forage and Turfgrass Management. 4, 1, 180006.

Research output: Contribution to journalArticle

pyraclostrobin
fungicide
leaf spot
fungicides
maize

Elevation of soybean seed oil content through selection for seed coat shininess

Zhang, D., Sun, L., Li, S., Wang, W., Ding, Y., Swarm, S. A., Li, L., Wang, X., Tang, X., Zhang, Z., Tian, Z., Brown, P. J., Cai, C., Nelson, R. L. & Ma, J., Jan 1 2018, In : Nature Plants. 4, 1, p. 30-35 6 p.

Research output: Contribution to journalArticle

seed oils
soybean oil
lipid content
domestication
seeds

Enhanced-efficiency fertilizer impacts on yield-scaled nitrous oxide emissions in maize

Graham, R. F., Greer, K. D., Villamil, M. B., Nafziger, E. D. & Pittelkow, C. M., Oct 25 2018, In : Soil Science Society of America Journal. 82, 6, p. 1469-1481 13 p.

Research output: Contribution to journalArticle

anhydrous ammonia
nitrous oxide
ammonia
maize
urea

Erratum: Farming with crops and rocks to address global climate, food and soil security (Nature Plants (2018), DOI: 10.1038/s41477-018-0108-y)

Beerling, D. J., Leake, J. R., Long, S. P., Scholes, J. D., Ton, J., Nelson, P. N., Bird, M., Kantzas, E., Taylor, L. L., Sarkar, B., Kelland, M., Delucia, E. H., Kantola, I., Müller, C., Rau, G. H. & Hansen, J., Jun 1 2018, In : Nature Plants. 4, 6, 1 p.

Research output: Contribution to journalComment/debate

acidification
farming systems
rocks
climate
crops

Erratum to: Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L. (Nature Genetics, (2018), 50, 11, (1565-1573), 10.1038/s41588-018-0237-2)

Zhang, J., Zhang, X., Tang, H., Zhang, Q., Hua, X., Ma, X., Zhu, F., Jones, T., Zhu, X., Bowers, J., Wai, C. M., Zheng, C., Shi, Y., Chen, S., Xu, X., Yue, J., Nelson, D. R., Huang, L., Li, Z., Xu, H. & 88 others, Zhou, D., Wang, Y., Hu, W., Lin, J., Deng, Y., Pandey, N., Mancini, M., Zerpa, D., Nguyen, J. K., Wang, L., Yu, L., Xin, Y., Ge, L., Arro, J., Han, J. O., Chakrabarty, S., Pushko, M., Zhang, W., Ma, Y., Ma, P., Lv, M., Chen, F., Zheng, G., Xu, J., Yang, Z., Deng, F., Chen, X., Liao, Z., Zhang, X., Lin, Z., Lin, H., Yan, H., Kuang, Z., Zhong, W., Liang, P., Wang, G., Yuan, Y., Shi, J., Hou, J., Lin, J., Jin, J., Cao, P., Shen, Q., Jiang, Q., Zhou, P., Ma, Y., Zhang, X., Xu, R., Liu, J., Zhou, Y., Jia, H., Ma, Q., Qi, R., Zhang, Z., Fang, J., Fang, H., Song, J., Wang, M., Dong, G., Wang, G., Chen, Z., Ma, T., Liu, H., Dhungana, S. R., Huss, S. E., Yang, X., Sharma, A., Trujillo, J. H., Martinez, M. C., Hudson, M., Riascos, J. J., Schuler, M. A., Chen, L., Braun, D. M., Li, L., Yu, Q., Wang, J., Wang, K., Schatz, M. C., Heckerman, D., Van Sluys, M. A., Souza, G. M., Moore, P. H., Sankoff, D., VanBuren, R., Paterson, A. H., Nagai, C. & Ming, R. R., Dec 1 2018, In : Nature Genetics. 50, 12, 1 p.

Research output: Contribution to journalComment/debate

Saccharum
Alleles
Genome
Molecular Sequence Annotation
Databases

Establishment of Miscanthus sinensis with decreased lignin biosynthesis by Agrobacterium–mediated transformation using antisense COMT gene

Yoo, J. H., Seong, E. S., Ghimire, B. K., Heo, K., Jin, X., Yamada, T., Clark, L. V., Sacks, E. J. & Yu, C. Y., Jun 1 2018, In : Plant Cell, Tissue and Organ Culture. 133, 3, p. 359-369 11 p.

Research output: Contribution to journalArticle

caffeate O-methyltransferase
Miscanthus sinensis
transgenic plants
lignin
biosynthesis
Bioreactors
Fly ash
fly ash
bioreactor
Phosphorus

Evaluation of Major Ancestors of North American Soybean Cultivars for Resistance to Three Pythium Species that Cause Seedling Blight

Rod, K. S., Walker, D. R. & Bradley, C. A., Nov 1 2018, In : Plant disease. 102, 11, p. 2241-2252 12 p.

Research output: Contribution to journalArticle

Pythium ultimum
Pythium
blight
ancestry
soybeans

Evaluation of selected fungicide application regimes and biotic agents for the management of basil downy mildew

Zhang, G., Babadoost, M., De Young, A., Johnson, E. T. & Schisler, D. A., Dec 2018, In : HortTechnology. 28, 6, p. 822-829 8 p.

Research output: Contribution to journalArticle

Open Access
basil
downy mildew
pesticide application
fungicides
quinoxyfen

Evolution of macromolecular structure: a 'double tale' of biological accretion and diversification

Caetano-Anollés, D., Caetano-Anollés, K. & Caetano-Anolles, G., Oct 1 2018, In : Science progress. 101, 4, p. 360-383 24 p.

Research output: Contribution to journalReview article

Genomics
Nucleic Acids
Growth
Proteins

Exploring the relationships between greenhouse gas emissions, yields, and soil properties in cropping systems

Behnke, G. D., Pittelkow, C. M., Nafziger, E. D. & Villamil, M. B., May 2018, In : Agriculture (Switzerland). 8, 5, 62.

Research output: Contribution to journalArticle

greenhouse gas emissions
aggregate stability
cropping systems
tillage
soil properties

Farming with crops and rocks to address global climate, food and soil security /631/449 /706/1143 /704/47 /704/106 perspective

Beerling, D. J., Leake, J. R., Long, S. P., Scholes, J. D., Ton, J., Nelson, P. N., Bird, M., Kantzas, E., Taylor, L. L., Sarkar, B., Kelland, M., Delucia, E. H., Kantola, I., Müller, C., Rau, G. & Hansen, J., Mar 1 2018, In : Nature Plants. 4, 3, p. 138-147 10 p.

Research output: Contribution to journalArticle

farming systems
rocks
silicates
climate
crops

Field evaluation of three sources of genetic resistance to sudden death syndrome of soybean

Brzostowski, L. F., Pruski, T. I., Hartman, G. L., Bond, J. P., Wang, D., Cianzio, S. R. & Diers, B. W., Jul 1 2018, In : Theoretical and Applied Genetics. 131, 7, p. 1541-1552 12 p.

Research output: Contribution to journalArticle

Quantitative Trait Loci
genetic resistance
Sudden Death
Soybeans
quantitative trait loci