Research Output

2019

Agronomic, economic, and environmental performance of nitrogen rates and source in Bangladesh's coastal rice agroecosystems

Shah-Al-Emran, Krupnik, T. J., Kumar, V., Ali, M. Y. & Pittelkow, C. M., Sep 1 2019, In : Field Crops Research. 241, 107567.

Research output: Contribution to journalArticle

Open Access

Aligning Product Chemistry and Soil Context for Agronomic Reuse of Human-Derived Resources

Trimmer, J. T., Margenot, A. J., Cusick, R. D. & Guest, J. S., Jun 4 2019, In : Environmental Science and Technology. 53, 11, p. 6501-6510 10 p.

Research output: Contribution to journalArticle

Amino acid differences in the N-terminal half of the polyprotein of Chinese turnip mosaic virus isolates affect symptom expression in Nicotiana benthamiana and radish

Hu, W. X., Seo, E. Y., Cho, I. S., Kim, J. K., Ju, H. K., Kim, I. H., Choi, G. W., Kim, B., Ahn, C. H., Domier, L. L., Oh, S. K., Hammond, J. & Lim, H. S., Jun 1 2019, In : Archives of Virology. 164, 6, p. 1683-1689 7 p.

Research output: Contribution to journalArticle

Ammonia flux measurements above a corn canopy using relaxed eddy accumulation and a flux gradient system

Nelson, A. J., Lichiheb, N., Koloutsou-Vakakis, S., Rood, M. J., Heuer, M., Myles, L. T., Joo, E., Miller, J. & Bernacchi, C., Jan 15 2019, In : Agricultural and Forest Meteorology. 264, p. 104-113 10 p.

Research output: Contribution to journalArticle

Analysis of genetic diversity of lychee (Litchi chinensis Sonn.) and wild forest relatives in the Sapindaceae from Vietnam using microsatellites

Tran, H., Kanzaki, S., Triest, L., Hormaza, I., Kuk, N. J., Ming, R., Bousquet, J., Khasa, D. & Van Damme, P., Dec 1 2019, In : Genetic Resources and Crop Evolution. 66, 8, p. 1653-1669 17 p.

Research output: Contribution to journalArticle

Analysis of the manage drain concentration database to evaluate agricultural management effects on drainage water nutrient concentrations

Hertzberger, A., Pittelkow, C. M., Harmel, R. D. & Christianson, L. E., Jan 1 2019, In : Transactions of the ASABE. 62, 4, p. 929-939 11 p.

Research output: Contribution to journalArticle

An assessment of true and false positive detection rates of stepwise epistatic model selection as a function of sample size and number of markers

Chen, A. H., Ge, W., Metcalf, W., Jakobsson, E., Mainzer, L. S. & Lipka, A. E., May 1 2019, In : Heredity. 122, 5, p. 660-671 12 p.

Research output: Contribution to journalArticle

An evaluation of primers for detecting denitrifiers via their functional genes

Ma, Y., Zilles, J. L. & Kent, A. D., Apr 2019, In : Environmental Microbiology. 21, 4, p. 1196-1210 15 p.

Research output: Contribution to journalArticle

A physical model-based method for retrieving urban land surface temperatures under cloudy conditions

Fu, P., Xie, Y., Weng, Q., Myint, S., Meacham-Hensold, K. & Bernacchi, C., Sep 1 2019, In : Remote Sensing of Environment. 230, 111191.

Research output: Contribution to journalArticle

A practical guide to genetic gain

Rutkoski, J. E., 2019, Advances in Agronomy. Sparks, D. L. (ed.). Academic Press Inc., p. 217-249 33 p. (Advances in Agronomy; vol. 157).

Research output: Chapter in Book/Report/Conference proceedingChapter

Are we approaching a water ceiling to maize yields in the United States?

Delucia, E. H., Chen, S., Guan, K., Peng, B., Li, Y., Gomez-Casanovas, N., Kantola, I. B., Bernacchi, C., Huang, Y., Long, S. P. & Ort, D. R., Jun 18 2019, In : Ecosphere. 10, 6, e02773.

Research output: Contribution to journalArticle

Open Access

A single nucleotide change in the overlapping MP and CP reading frames results in differences in symptoms caused by two isolates of Youcai mosaic virus

Ju, H. K., Kim, I. H., Hu, W. X., Kim, B., Choi, G. W., Kim, J., Lim, Y. P., Domier, L. L., Hammond, J. & Lim, H. S., Jan 1 2019, In : Archives of Virology.

Research output: Contribution to journalArticle

Assembly of allele-aware, chromosomal-scale autopolyploid genomes based on Hi-C data

Zhang, X., Zhang, S., Zhao, Q., Ming, R. & Tang, H., Aug 1 2019, In : Nature plants. 5, 8, p. 833-845 13 p.

Research output: Contribution to journalArticle

Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop

Souza, G. M., Van Sluys, M. A., Lembke, C. G., Lee, H., Margarido, G. R. A., Hotta, C. T., Gaiarsa, J. W., Diniz, A. L., Oliveira, M. D. M., Ferreira, S. D. S., Nishiyama, M. Y., Ten-Caten, F., Ragagnin, G. T., Andrade, P. D. M., De Souza, R. F., Nicastro, G. G., Pandya, R., Kim, C., Guo, H., Durham, A. M. & 9 others, Carneiro, M. S., Zhang, J., Zhang, X., Zhang, Q., Ming, R., Schatz, M. C., Davidson, B., Paterson, A. H. & Heckerman, D., Dec 6 2019, In : GigaScience. 8, 12, giz129.

Research output: Contribution to journalArticle

Open Access

Assessing safe food handling knowledge and practices of food service managers in Doha, Qatar

Asim, H. S., Elnemr, I., Goktepe, I., Feng, H., Park, H. K., Alzeyara, S., AlHajri, M. & Kushad, M., Jul 1 2019, In : Food Science and Technology International. 25, 5, p. 440-448 9 p.

Research output: Contribution to journalArticle

Assessing variation in maize grain nitrogen concentration and its implications for estimating nitrogen balance in the US North Central region

Tenorio, F. A. M., Eagle, A. J., McLellan, E. L., Cassman, K. G., Howard, R., Below, F. E., Clay, D. E., Coulter, J. A., Geyer, A. B., Joos, D. K., Lauer, J. G., Licht, M. A., Lindsey, A. J., Maharjan, B., Pittelkow, C. M., Thomison, P. R., Wortmann, C. S., Sadras, V. O. & Grassini, P., Jul 1 2019, In : Field Crops Research. 240, p. 185-193 9 p.

Research output: Contribution to journalArticle

Assessing variation in us soybean seed composition (protein and oil)

Assefa, Y., Purcell, L. C., Salmeron, M., Naeve, S., Casteel, S. N., Kovács, P., Archontoulis, S., Licht, M., Below, F., Kandel, H., Lindsey, L. E., Gaska, J., Conley, S., Shapiro, C., Orlowski, J. M., Golden, B. R., Kaur, G., Singh, M., Thelen, K., Laurenz, R. & 2 others, Davidson, D. & Ciampitti, I. A., Mar 11 2019, In : Frontiers in Plant Science. 10, 298.

Research output: Contribution to journalArticle

Open Access

A tale of two rubrics: Realigning genre instruction through improved response rubrics in a writing-intensive physics course

Yoritomo, J. Y., Turnipseed, N., Villotti, M. J., Tate, A., Searsmith, K., Perdekamp, M. G., Prior, P. & Zilles, J. L., Jun 15 2019, In : ASEE Annual Conference and Exposition, Conference Proceedings.

Research output: Contribution to journalConference article

A turnip mosaic virus determinant of systemic necrosis in nicotiana benthamiana and a novel resistance-breaking determinant in Chinese cabbage identified from chimeric infectious clones

Kim, I. H., Ju, H. K., Gong, J., Han, J. Y., Seo, E. Y., Cho, S. W., Hu, W. X., Choi, S. R., Lim, Y. P., Domier, L. L., Hammond, J. & Lim, H. S., Jan 1 2019, In : Phytopathology. 109, 9, p. 1638-1647 10 p.

Research output: Contribution to journalArticle

Auxin regulation involved in gynoecium morphogenesis of papaya flowers

Zhou, P., Fatima, M., Ma, X., Liu, J. & Ming, R., Dec 1 2019, In : Horticulture Research. 6, 1, 119.

Research output: Contribution to journalArticle

Open Access

Biomass yield in a genetically diverse Miscanthus sinensis germplasm panel evaluated at five locations revealed individuals with exceptional potential

Clark, L. V., Dwiyanti, M. S., Anzoua, K. G., Brummer, J. E., Ghimire, B. K., Głowacka, K., Hall, M., Heo, K., Jin, X., Lipka, A. E., Peng, J., Yamada, T., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Oct 1 2019, In : GCB Bioenergy. 11, 10, p. 1125-1145 21 p.

Research output: Contribution to journalArticle

Open Access

Boron and zinc deficiencies and toxicities and their interactions with other nutrients in soybean roots, leaves, and seeds

Pawlowski, M. L., Helfenstein, J., Frossard, E. & Hartman, G. L., Apr 3 2019, In : Journal of Plant Nutrition. 42, 6, p. 634-649 16 p.

Research output: Contribution to journalArticle

Breeding progress and preparedness for mass-scale deployment of perennial lignocellulosic biomass crops switchgrass, miscanthus, willow and poplar

Clifton-Brown, J., Harfouche, A., Casler, M. D., Dylan Jones, H., Macalpine, W. J., Murphy-Bokern, D., Smart, L. B., Adler, A., Ashman, C., Awty-Carroll, D., Bastien, C., Bopper, S., Botnari, V., Brancourt-Hulmel, M., Chen, Z., Clark, L. V., Cosentino, S., Dalton, S., Davey, C., Dolstra, O. & 39 others, Donnison, I., Flavell, R., Greef, J., Hanley, S., Hastings, A., Hertzberg, M., Hsu, T. W., Huang, L. S., Iurato, A., Jensen, E., Jin, X., Jørgensen, U., Kiesel, A., Kim, D. S., Liu, J., McCalmont, J. P., McMahon, B. G., Mos, M., Robson, P., Sacks, E. J., Sandu, A., Scalici, G., Schwarz, K., Scordia, D., Shafiei, R., Shield, I., Slavov, G., Stanton, B. J., Swaminathan, K., Taylor, G., Torres, A. F., Trindade, L. M., Tschaplinski, T., Tuskan, G. A., Yamada, T., Yeon Yu, C., Zalesny, R. S., Zong, J. & Lewandowski, I., Jan 2019, In : GCB Bioenergy. 11, 1, p. 118-151 34 p.

Research output: Contribution to journalArticle

BSD2 is a Rubisco-specific assembly chaperone, forms intermediary hetero-oligomeric complexes, and is nonlimiting to growth in tobacco

Conlan, B., Birch, R., Kelso, C., Holland, S., De Souza, A. P., Long, S. P., Beck, J. L. & Whitney, S. M., Apr 2019, In : Plant Cell and Environment. 42, 4, p. 1287-1301 15 p.

Research output: Contribution to journalArticle

Bundle sheath chloroplast volume can house sufficient Rubisco to avoid limiting C4 photosynthesis during chilling

Pignon, C. P., Lundgren, M. R., Osborne, C. P. & Long, S. P., Jan 1 2019, In : Journal of experimental botany. 70, 1, p. 357-365 9 p.

Research output: Contribution to journalArticle

Calibration of stainless steel-edged V-notch weir stop logs for water level control structures

Christianson, L. E., Christianson, R. D., Lipka, A. E., Bailey, S. B., Chandrasoma, J., McCoy, C., Preza Fontes, G., Roh, J., Sanchez Bustamante Bailon, A. P., Wickramarathne, N. M. & Cooke, R. A., Jan 1 2019, In : Applied Engineering in Agriculture. 35, 5, p. 745-749 5 p.

Research output: Contribution to journalArticle

Carbon assimilation in crops at high temperatures

Slattery, R. A. & Ort, D. R., Oct 1 2019, In : Plant Cell and Environment. 42, 10, p. 2750-2758 9 p.

Research output: Contribution to journalReview article

Open Access

Carfentrazone-ethyl resistance in an Amaranthus tuberculatus population is not mediated by amino acid alterations in the PPO2 protein

Obenland, O. A., Ma, R., O’Brien, S. R., Lygin, A. V. & Riechers, D. E., Apr 2019, In : PloS one. 14, 4, e0215431.

Research output: Contribution to journalArticle

Open Access

Characterization of multiple herbicide-resistant waterhemp (Amaranthus tuberculatus) populations from Illinois to VLCFA-inhibiting herbicides

Strom, S. A., Gonzini, L. C., Mitsdarfer, C., Davis, A., Riechers, D. E. & Hager, A. G., Jul 1 2019, In : Weed Science. 67, 4, p. 369-379 11 p.

Research output: Contribution to journalArticle

Characterization of soybean STAY-GREEN genes in susceptibility to foliar chlorosis of sudden death syndrome

Chang, H. X., Tan, R., Hartman, G. L., Wen, Z., Sang, H., Domier, L. L., Whitham, S. A., Wang, D. & Chilvers, M. I., Jun 2019, In : Plant physiology. 180, 2, p. 711-717 7 p.

Research output: Contribution to journalArticle

Open Access

Coevolution of resistance to PPO inhibitors in waterhemp (Amaranthus tuberculatus) and Palmer amaranth (Amaranthus palmeri)

Lillie, K. J., Giacomini, D. A., Green, J. D. & Tranel, P. J., Sep 1 2019, In : Weed Science. 67, 5, p. 521-526 6 p.

Research output: Contribution to journalArticle

Colonization of seeds by soilborne fungi: Linking seed dormancy-defense syndromes, evolutionary constraints, and fungal traits

Stump, S. M., Sarmiento, C., Zalamea, P. C., Dalling, J. W., Davis, A. S., Shaffer, J. P. & Arnold, A. E., Apr 5 2019, Seed Endophytes: Biology and Biotechnology. Springer International Publishing, p. 465-481 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Open Access

Comparative Analysis of SUS Gene Family between Saccharum officinarum and Saccharum spontaneum

Shi, Y., Xu, H., Shen, Q., Lin, J., Wang, Y., Hua, X., Yao, W., Yu, Q., Ming, R. & Zhang, J., Sep 1 2019, In : Tropical Plant Biology. 12, 3, p. 174-185 12 p.

Research output: Contribution to journalArticle

Comparative genomics revealed the gene evolution and functional divergence of magnesium transporter families in Saccharum

Wang, Y., Hua, X., Xu, J., Chen, Z., Fan, T., Zeng, Z., Wang, H., Hour, A. L., Yu, Q., Ming, R. & Zhang, J., Jan 24 2019, In : BMC genomics. 20, 1, 83.

Research output: Contribution to journalArticle

Comparative resistomic analyses of Lysobacter species with high intrinsic multidrug resistance

Yu, M. & Zhao, Y., Dec 2019, In : Journal of Global Antimicrobial Resistance. 19, p. 320-327 8 p.

Research output: Contribution to journalArticle

Convergent evolution of saccate body shapes in nematodes through distinct developmental mechanisms

Thapa, S., Gates, M. K., Reuter-Carlson, U., Androwski, R. J. & Schroeder, N. E., Mar 14 2019, In : EvoDevo. 10, 1, 21 p., 5.

Research output: Contribution to journalArticle

Open Access

Cover crop rotations affect greenhouse gas emissions and crop production in Illinois, USA

Behnke, G. D. & Villamil, M. B., Sep 1 2019, In : Field Crops Research. 241, 107580.

Research output: Contribution to journalArticle

Deleterious mutation burden and its association with complex traits in sorghum (Sorghum bicolor)

Valluru, R., Gazave, E. E., Fernandes, S. B., Ferguson, J. N., Lozano, R., Hirannaiah, P., Zuo, T., Brown, P. J., Leakey, A. D. B., Gore, M. A., Buckler, E. S. & Bandillo, N., Mar 2019, In : Genetics. 211, 3, p. 1075-1087 13 p.

Research output: Contribution to journalArticle

Designing multifunctional woody polycultures according to landowner preferences in Central Illinois

Stanek, E. C., Lovell, S. T. & Reisner, A., Dec 1 2019, In : Agroforestry Systems. 93, 6, p. 2293-2311 19 p.

Research output: Contribution to journalArticle

Detecting In-Season Crop Nitrogen Stress of Corn for Field Trials Using UAV- and CubeSat-Based Multispectral Sensing

Cai, Y., Guan, K., Nafziger, E., Chowdhary, G., Peng, B., Jin, Z., Wang, S. & Wang, S., Dec 2019, In : IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing. 12, 12, p. 5153-5166 14 p., 8950295.

Research output: Contribution to journalArticle

Open Access

Determination of genome size variations among different date palm cultivars (Phoenix dactylifera L.) by flow cytometry

Jatt, T., Lee, M. S., Rayburn, A. L., Jatoi, M. A. & Mirani, A. A., Dec 1 2019, In : 3 Biotech. 9, 12, 457.

Research output: Contribution to journalArticle

Developing and validating a decision support tool for media selection to mitigate drainage waters

Ezzati, G., Healy, M. G., Christianson, L., Feyereisen, G. W., Thornton, S., Daly, K. & Fenton, O., Aug 2019, In : Ecological Engineering: X. 2, 100010.

Research output: Contribution to journalArticle

Open Access

Development of Economic Thresholds for Sugarcane Aphid (Hemiptera: Aphididae) in Susceptible Grain Sorghum Hybrids

Gordy, J. W., Brewer, M. J., Bowling, R. D., Buntin, G. D., Seiter, N. J., Kerns, D. L., Reay-Jones, F. P. F. & Way, M. O., Jun 1 2019, In : Journal of economic entomology. 112, 3, p. 1251-1259 9 p.

Research output: Contribution to journalArticle

Diatraea saccharalis history of colonization in the Americas. The case for human-mediated dispersal

Francischini, F. J. B., Cordeiro, E. M. G., de Campos, J. B., Alves-Pereira, A., Gomes Viana, J. P., Wu, X., Wei, W., Brown, P., Joyce, A., Murua, G., Fogliata, S., Clough, S. J. & Zucchi, M. I., 2019, In : PloS one. 14, 7, e0220031.

Research output: Contribution to journalArticle

Open Access

Differential gene expression among three sex types reveals a MALE STERILITY 1 (CpMS1) for sex differentiation in papaya

Zerpa-Catanho, D., Wai, J., Wang, M. L., Yu, LA., Nguyen, J. & Ming, R., Dec 9 2019, In : BMC Plant Biology. 19, 1, 545.

Research output: Contribution to journalArticle

Open Access

Disentangling weed diversity and weather impacts on long-term crop productivity in a wheat-legume rotation

Gonzalez-Andujar, J. L., Aguilera, M. J., Davis, A. S. & Navarrete, L., Feb 15 2019, In : Field Crops Research. 232, p. 24-29 6 p.

Research output: Contribution to journalArticle