Research Output 1971 2020

2019

Empirical investigation of mutation rate for herbicide resistance

Casale, F. A., Giacomini, D. A. & Tranel, P. J., Jul 1 2019, In : Weed Science. 67, 4, p. 361-368 8 p.

Research output: Contribution to journalArticle

herbicide resistance
herbicides
mutation
mutants
acetolactate synthase

Epidermal remodeling in Caenorhabditis elegans dauers requires the nidogen domain protein DEX-1

Flatt, K. M., Beshers, C., Unal, C., Cohen, J. D., Sundaram, M. V. & Schroeder, N. E., Jan 2019, In : Genetics. 211, 1, p. 169-183 15 p.

Research output: Contribution to journalArticle

Caenorhabditis elegans
Zona Pellucida
Dendrites
Morphogenesis
Epidermis

Epithelial shaping by diverse apical extracellular matrices requires the nidogen domain protein DEX-1 in Caenorhabditis elegans

Cohen, J. D., Flatt, K. M., Schroeder, N. E. & Sundaram, M. V., Jan 2019, In : Genetics. 211, 1, p. 185-200 16 p.

Research output: Contribution to journalArticle

Zona Pellucida
Caenorhabditis elegans
Extracellular Matrix
Epithelium
Proteins

Estimation of realized rates of genetic gain and indicators for breeding program assessment

Rutkoski, J. E., May 1 2019, In : Crop Science. 59, 3, p. 981-993 13 p.

Research output: Contribution to journalArticle

Open Access
genetic improvement
breeding
breeding value
methodology
plant breeding

Evaluation of cover crop sensitivity to residual herbicides applied in the previous soybean [Glycine max (L.) Merr] crop

Whalen, D. M., Bish, M. D., Young, B. G., Hager, A. G., Conley, S. P., Reynolds, D. B., Steckel, L. E., Norsworthy, J. K. & Bradley, K. W., Apr 1 2019, In : Weed Technology. 33, 2, p. 312-320 9 p.

Research output: Contribution to journalArticle

fomesafen
metolachlor
cover crops
Glycine max
herbicides
Open Access
Sorghum
Genome-Wide Association Study
Sorghum (Poaceae)
marker-assisted selection
Zea mays

Evolution and Expression Analysis of Starch Synthase Gene Families in Saccharum spontaneum

Ma, P., Yuan, Y., Shen, Q., Jiang, Q., Hua, X., Zhang, Q., Zhang, M., Ming, R. R. & Zhang, J., Sep 1 2019, In : Tropical Plant Biology. 12, 3, p. 158-173 16 p.

Research output: Contribution to journalArticle

Starch Synthase
Saccharum spontaneum
Saccharum
starch synthase
Genes

Exploring the differential mechanisms of carotenoid biosynthesis in the yellow peel and red flesh of papaya

Shen, Y. H., Yang, F. Y., Lu, B. G., Zhao, W. W., Jiang, T., Feng, L., Chen, X. J. & Ming, R. R., Jan 16 2019, In : BMC genomics. 20, 1, 49.

Research output: Contribution to journalArticle

Carica
Carotenoids
Biosynthetic Pathways
Fruit
Lutein

Field-grown tobacco plants maintain robust growth while accumulating large quantities of a bacterial cellulase in chloroplasts

Schmidt, J. A., McGrath, J. M., Hanson, M. R., Long, S. P. & Ahner, B. A., Jul 1 2019, In : Nature Plants. 5, 7, p. 715-721 7 p.

Research output: Contribution to journalArticle

endo-1,4-beta-glucanase
tobacco
chloroplasts
recombinant proteins
proteins

Field pathogenomics of Fusarium head blight reveals pathogen transcriptome differences due to host resistance

Fall, L. A., Salazar, M. M., Drnevich, J., Holmes, J. R., Tseng, M. C., Kolb, F. L. & Mideros Mora, S. X., Jan 1 2019, In : Mycologia. 111, 4, p. 563-573 11 p.

Research output: Contribution to journalArticle

Fusarium head blight
Fusarium graminearum
Fusarium
Transcriptome
transcriptome

Field Studies on the Horizontal Transmission Potential by Voluntary and Involuntary Carriers of Helicoverpa armigera nucleopolyhedrovirus (Baculoviridae)

Black, J. L., Lorenz, G. M., Cato, A. J., Faske, T. R., Popham, H. J. R., Paddock, K. J., Bateman, N. R. & Seiter, N. J., May 22 2019, In : Journal of economic entomology. 112, 3, p. 1098-1104 7 p.

Research output: Contribution to journalArticle

Helicoverpa armigera nucleopolyhedrovirus
horizontal transmission
Baculoviridae
larva
arthropod

Fire blight disease, a fast-approaching threat to apple and pear production in China

ZHAO, Y. Q., TIAN, Y. L., WANG, L. M., GENG, G. M., ZHAO, W. J., HU, B. S. & Zhao, Y., Apr 2019, In : Journal of Integrative Agriculture. 18, 4, p. 815-820 6 p.

Research output: Contribution to journalReview article

Open Access
Pyrus
Erwinia amylovora
Malus
pears
China

First report of bacterial leaf streak of corn caused by xanthomonas vasicola pv. vasculorum in Illinois

Jamann, T. M., Plewa, D., Mideros Mora, S. X. & Bissonnette, S., May 2019, In : Plant disease. 103, 5

Research output: Contribution to journalArticle

Xanthomonas vasicola
corn
leaves

First report of red crown rot of soybeans caused by Calonectria ilicicola (anamorph: Cylindrocladium parasiticum) in Illinois

Kleczewski, N. M., Plewa, D., Kangas, C., Phillippi, E. & Kleczewski, V., Jul 2019, In : Plant disease. 103, 7, 1 p.

Research output: Contribution to journalArticle

Open Access
Calonectria
Cylindrocladium
crown rot
stem rot
anamorphs

First report of tar spot of maize (Zea mays), caused by Phyllachora maydis, in Ohio

Dalla Lana, F., Plewa, D. E., Phillippi, E. S., Garzonio, D., Hesterman, R., Kleczewski, N. M. & Paul, P. A., Jul 2019, In : Plant disease. 103, 7, 1 p.

Research output: Contribution to journalArticle

Open Access
Phyllachora
emerging diseases
etiology
Zea mays
fungi

Five newly collected turnip mosaic virus (Tumv) isolates from jeju island, korea are closely related to previously reported korean tumv isolates but show distinctive symptom development

Hu, W. X., Kim, B. J., Kwak, Y., Seo, E. Y., Kim, J. K., Han, J. Y., Kim, I. H., Lim, Y. P., Cho, I. S., Domier, L. L., Hammond�, J. & Lim, H. S., Jan 1 2019, In : Plant Pathology Journal. 35, 4, p. 381-388 8 p.

Research output: Contribution to journalArticle

Turnip mosaic virus
signs and symptoms (plants)
Korean Peninsula
insect vectors
Chinese cabbage

Foliar fungicide application effects on whole plant BMR and floury corn varieties, and whole plant corn silage composition

Hollis, M. E., Pate, R. T., Mideros Mora, S. X., Fellows, G. M., Akins, M., Murphy, M. R. & Cardoso, F., Nov 2019, In : Animal Feed Science and Technology. 257, 114264.

Research output: Contribution to journalArticle

whole crop silage
corn silage
pesticide application
Zea mays
corn

Full-length infectious clones of two new isolates of tomato mosaic virus induce distinct symptoms associated with two differential amino acid residues in 128-kDa protein

Choi, G. W., Oh, J. P., Cho, I. S., Ju, H. K., Hu, W. X., Kim, B., Seo, E. Y., Park, J. S., Domier, L. L., Hammond, J., Song, K. & Lim, H. S., Jan 1 2019, In : Plant Pathology Journal. 35, 5, p. 538-542 5 p.

Research output: Contribution to journalComment/debate

Tomato mosaic virus
clones
amino acids
proteins
Nicotiana benthamiana

Genetic dissection of domestication-related traits in soybean through genotyping-by-sequencing of two interspecific mapping populations

Swarm, S. A., Sun, L., Wang, X., Wang, W., Brown, P. J., Ma, J. & Nelson, R. L., Apr 1 2019, In : Theoretical and Applied Genetics. 132, 4, p. 1195-1209 15 p.

Research output: Contribution to journalArticle

domestication
Soybeans
genotyping
Dissection
quantitative trait loci

Genetic diversity, population structure and key phenotypic traits driving variation within soyabean (Glycine max) collection in Ghana

Denwar, N. N., Awuku, F. J., Diers, B. W., Addae-Frimpomaah, F., Chigeza, G., Oteng-Frimpong, R., Puozaa, D. K. & Barnor, M. T., Oct 1 2019, In : Plant Breeding. 138, 5, p. 577-587 11 p.

Research output: Contribution to journalArticle

Ghana
Soybeans
Glycine max
population structure
principal component analysis

Genome-Wide analysis and prediction of resistance to goss’s wilt in maize

Cooper, J. S., Rice, B. R., Shenstone, E. M., Lipka, A. E. & Jamann, T. M., Jun 2019, In : Plant Genome. 12, 2, 180045.

Research output: Contribution to journalArticle

Open Access
Zea mays
Genome
genome
prediction
corn

Genome-Wide Analysis of Nitrate Transporter (NRT/NPF) Family in Sugarcane Saccharum spontaneum L.

Wang, J., Li, Y., Zhu, F., Ming, R. R. & Chen, L., Sep 1 2019, In : Tropical Plant Biology. 12, 3, p. 133-149 17 p.

Research output: Contribution to journalArticle

Saccharum spontaneum
Saccharum
sugarcane
transporters
nitrates

Genome-wide analysis of the MYB-CC gene family of maize

Bai, J., Sun, F., Wang, M., Su, L., Li, R. & Caetano-Anolles, G., Feb 15 2019, In : Genetica. 147, 1

Research output: Contribution to journalArticle

Zea mays
Genome
genome
corn
Genes

Genome-wide association and genomic prediction for biomass yield in a genetically diverse Miscanthus sinensis germplasm panel phenotyped at five locations in Asia and North America

Clark, L. V., Dwiyanti, M. S., Anzoua, K. G., Brummer, J. E., Ghimire, B. K., Głowacka, K., Hall, M., Heo, K., Jin, X., Lipka, A. E., Peng, J., Yamada, T., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Aug 2019, In : GCB Bioenergy. 11, 8, p. 988-1007 20 p.

Research output: Contribution to journalArticle

Open Access
Miscanthus sinensis
germplasm
Nucleotides
Polymorphism
single nucleotide polymorphism
Heterodera glycines
Polymorphism
Soybeans
Single Nucleotide Polymorphism
Cysts

Genome-wide association studies for yield-related traits in soft red winter wheat grown in Virginia

Ward, B. P., Brown-Guedira, G., Kolb, F. L., Van Sanford, D. A., Tyagi, P., Sneller, C. H. & Griffey, C. A., Feb 2019, In : PloS one. 14, 2, e0208217.

Research output: Contribution to journalArticle

Open Access
soft red winter wheat
Genome-Wide Association Study
Triticum
Genes
kinship

Genome wide association study identifies novel single nucleotide polymorphic loci and candidate genes involved in soybean sudden death syndrome resistance

Swaminathan, S., Das, A., Assefa, T., Knight, J. M., Da Silva, A. F., Carvalho, J. P. S., Hartman, G. L., Huang, X., Leandro, L. F., Cianzio, S. R. & Bhattacharyya, M. K., Feb 2019, In : PloS one. 14, 2, e0212071.

Research output: Contribution to journalArticle

Open Access
Genome-Wide Association Study
Sudden Death
Soybeans
Nucleotides
Genes
Soybean mosaic virus
Mosaic Viruses
Genome-Wide Association Study
Soybeans
Seeds

Genome-Wide Identification and Characterization of the Vacuolar H+-ATPase Subunit H Gene Family in Crop Plants

Kang, C., Sun, F., Caetano-Anollés, G., Yan, L., Li, R. & Bai, J., Oct 16 2019, In : International Journal of Molecular Sciences. 20, 20, 5125.

Research output: Contribution to journalArticle

Open Access
Vacuolar Proton-Translocating ATPases
genome
crops
genes
Crops

Genomic and Allelic Analyses of Laccase Genes in Sugarcane (Saccharum spontaneum L.)

Zhang, W., Lin, J., Dong, F., Ma, Q., Wu, S., Ma, X., Fatima, M., Jia, H. & Ming, R., Sep 1 2019, In : Tropical Plant Biology. 12, 3, p. 219-229 11 p.

Research output: Contribution to journalArticle

Saccharum spontaneum
Laccase
Saccharum
laccase
sugarcane

Genomic selection using maize ex-plant variety protection germplasm for the prediction of nitrogen-use traits

Mastrodomenico, A. T., Bohn, M. O., Lipka, A. E. & Below, F. E., Jan 1 2019, In : Crop Science. 59, 1, p. 212-220 9 p.

Research output: Contribution to journalArticle

plant variety protection
marker-assisted selection
germplasm
prediction
corn

Germplasm Development of Underutilized Temperate U.S. Tree Crops

Revord, R., Lovell, S. T., Molnar, T., Wolz, K. J. & Mattia, C., Mar 14 2019, In : Sustainability. 11, 6, 20 p., 1546.

Research output: Contribution to journalReview article

Open Access
germplasm
Crops
crop
breeding
agroforestry
Ananas
Crassulacean acid metabolism
Aquaporins
Boron
aquaporins

Healthy Planet, Healthy Youth: A Food Systems Education and Promotion Intervention to Improve Adolescent Diet Quality and Reduce Food Waste

Prescott, M. P., Burg, X., Metcalfe, J. J., Lipka, A. E., Herritt, C. & Cunningham-sabo, L., Aug 11 2019, In : Nutrients. 11, 8, 1869.

Research output: Contribution to journalArticle

Open Access
Planets
Food Quality
food waste
nutritional adequacy
education
Betaine-Homocysteine S-Methyltransferase
betaine-homocysteine S-methyltransferase
5-Methyltetrahydrofolate-Homocysteine S-Methyltransferase
methionine synthase
choline

Herbicide Metabolism: Crop Selectivity, Bioactivation, Weed Resistance, and Regulation

Nandula, V. K., Riechers, D. E., Ferhatoglu, Y., Barrett, M., Duke, S. O., Dayan, F. E., Goldberg-Cavalleri, A., Tétard-Jones, C., Wortley, D. J., Onkokesung, N., Brazier-Hicks, M., Edwards, R., Gaines, T., Iwakami, S., Jugulam, M. & Ma, R., Mar 1 2019, In : Weed Science. 67, 2, p. 149-175 27 p.

Research output: Contribution to journalArticle

herbicides
weeds
resistance mechanisms
metabolism
crops

High-throughput field phenotyping using hyperspectral reflectance and partial least squares regression (PLSR) reveals genetic modifications to photosynthetic capacity

Meacham-Hensold, K., Montes, C. M., Wu, J., Guan, K., Fu, P., Ainsworth, E. A., Pederson, T., Moore, C. E., Brown, K. L., Raines, C. & Bernacchi, C. J., Sep 15 2019, In : Remote Sensing of Environment. 231, 111176.

Research output: Contribution to journalArticle

Open Access
genetic engineering
reflectance
least squares
Throughput
phenotype

Homologues of the RNA binding protein RsmA in Pseudomonas syringae pv. tomato DC3000 exhibit distinct binding affinities with non-coding small RNAs and have distinct roles in virulence

Ge, Y., Lee, J. H., Liu, J., Yang, H. W., Tian, Y., Hu, B. & Zhao, Y., Jan 1 2019, In : Molecular Plant Pathology. 20, 9, p. 1217-1236 20 p.

Research output: Contribution to journalArticle

Open Access
Pseudomonas syringae
Pseudomonas syringae pv. tomato
Small Untranslated RNA
RNA-binding proteins
RNA-Binding Proteins

Horizontal gene transfer in human-associated microorganisms inferred by phylogenetic reconstruction and reconciliation

Jeong, H., Arif, B., Caetano-Anolles, G., Kim, K. M. & Nasir, A., Dec 1 2019, In : Scientific reports. 9, 1, 5953.

Research output: Contribution to journalArticle

Open Access
Horizontal Gene Transfer
Microbiota
Human Body
Human Genome
Genes

Host-derived gene silencing of parasite fitness genes improves resistance to soybean cyst nematodes in stable transgenic soybean

Tian, B., Li, J., Vodkin, L. O., Todd, T. C., Finer, J. J. & Trick, H. N., Sep 1 2019, In : Theoretical and Applied Genetics. 132, 9, p. 2651-2662 12 p.

Research output: Contribution to journalArticle

Open Access
Heterodera glycines
Gene Silencing
gene silencing
Soybeans
Cysts

Human metallo-β-lactamase enzymes degrade penicillin

Diene, S. M., Pinault, L., Keshri, V., Armstrong, N., Khelaifia, S., Chabrière, E., Caetano-Anolles, G., Colson, P., La Scola, B., Rolain, J. M., Pontarotti, P. & Raoult, D., Dec 1 2019, In : Scientific reports. 9, 1, 12173.

Research output: Contribution to journalArticle

Open Access
Lactams
Penicillins
Sulbactam
Enzymes
Anti-Bacterial Agents
Open Access
hydroponics
Liquefaction
liquefaction
Wastewater
wastewater
Open Access
artificial intelligence
reflectance
least squares
operator regions
leaves

Identification and characterization of a novel stay‐green QTL that increases yield in maize

Zhang, J., Fengler, K. A., Van Hemert, J. L., Gupta, R., Mongar, N., Sun, J., Allen, W. B., Wang, Y., Weers, B., Mo, H., Lafitte, R., Hou, Z., Bryant, A., Ibraheem, F., Arp, J., Swaminathan, K., Moose, S. P., Li, B. & Shen, B., Apr 29 2019, In : Plant Biotechnology Journal. p. 1-14

Research output: Contribution to journalArticle

Open Access
RNA Interference
Zea mays
quantitative trait loci
Biomass
corn

Identification and Expression Analysis of TCP Genes in Saccharum spontaneum L

Lin, J., Zhu, M., Cai, M., Zhang, W., Fatima, M., Jia, H., Li, F. & Ming, R., Sep 1 2019, In : Tropical Plant Biology. 12, 3, p. 206-218 13 p.

Research output: Contribution to journalArticle

Saccharum spontaneum
Saccharum
sugarcane
Sorghum (Poaceae)
Genes

Impact of chlorine exposure time on disinfection byproduct formation in the presence of iopamidol and natural organic matter during chloramination

Ackerson, N. O. B., Killinger, A. H., Liberatore, H. K., Ternes, T. A., Plewa, M. J., Richardson, S. D. & Duirk, S. E., Apr 2019, In : Journal of environmental sciences (China). 78, p. 204-214 11 p.

Research output: Contribution to journalArticle

Iopamidol
Disinfection
Chlorine
disinfection
Biological materials

Impact of warm-season grass management on feedstock production on marginal farmland in Central Illinois

Zumpf, C., Lee, M. S., Thapa, S., Guo, J., Mitchell, R., Volenec, J. J. & Lee, D., Oct 1 2019, In : GCB Bioenergy. 11, 10, p. 1202-1214 13 p.

Research output: Contribution to journalArticle

Open Access
warm season grasses
feedstocks
Feedstocks
agricultural land
grass

Implementation of the effect of urease inhibitor on ammonia emissions following urea-based fertilizer application at a Zea mays field in central Illinois: A study with SURFATM-NH 3 model

Lichiheb, N., Myles, L. T., Personne, E., Heuer, M., Buban, M., Nelson, A. J., Koloutsou-Vakakis, S., Rood, M. J., Joo, E., Miller, J. & Bernacchi, C., May 15 2019, In : Agricultural and Forest Meteorology. 269-270, p. 78-87 10 p.

Research output: Contribution to journalArticle

urease inhibitors
fertilizer application
urea
inhibitor
ammonia

Improving infrared spectroscopy characterization of soil organic matter with spectral subtractions

Margenot, A. J., Parikh, S. J. & Calderón, F. J., Jan 2019, In : Journal of Visualized Experiments. 2019, 143, e57464.

Research output: Contribution to journalArticle

Biological materials
Infrared spectroscopy
Spectrum Analysis
Soil
Soils

Increased temperatures may safeguard the nutritional quality of crops under future elevated CO2 concentrations

Köhler, I. H., Huber, S. C., Bernacchi, C. & Baxter, I. R., Mar 2019, In : Plant Journal. 97, 5, p. 872-886 15 p.

Research output: Contribution to journalArticle

Nutritive Value
nutritive value
carbon dioxide
Seeds
Temperature