Research Output

Article

Aphis glycines virus 1, a new bicistronic virus with two functional internal ribosome entry sites, is related to a group of unclassified viruses in the Picornavirales

Yasmin, T., Thekke-Veetil, T., Hobbs, H. A., Nelson, B. D., McCoppin, N. K., Lagos-Kutz, D., Hartman, G. L., Lambert, K. N., Walker, D. R. & Domier, L. L., Jan 1 2020, In : Journal of General Virology. 101, 1, p. 105-111 7 p.

Research output: Contribution to journalArticle

Open Access

A Phylogenomic Census of Molecular Functions Identifies Modern Thermophilic Archaea as the Most Ancient Form of Cellular Life

Nasir, A., Kim, K. M. & Caetano-Anollés, G., 2014, In : Archaea. 2014, 706468.

Research output: Contribution to journalArticle

A phylogenomic data-driven exploration of viral origins and evolution

Nasir, A. & Caetano-Anollés, G., Jan 1 2015, In : Science Advances. 1, 8, 1500527.

Research output: Contribution to journalArticle

A phylogenomic reconstruction of the protein world based on a genomic census of protein fold architecture

Wang, M., Boca, S. M., Kalelkar, R., Mittenthal, J. E. & Caetano-Anolles, G., Jan 1 2006, In : Complexity. 12, 1, p. 27-40 14 p.

Research output: Contribution to journalArticle

A physical map of the papaya genome with integrated genetic map and genome sequence

Yu, Q., Tong, E., Skelton, R. L., Bowers, J. E., Jones, M. R., Murray, J. E., Hou, S., Guan, P., Acob, R. A., Luo, M. C., Moore, P. H., Alam, M., Paterson, A. H. & Ming, R., Aug 7 2009, In : BMC genomics. 10, 1 p., 1471.

Research output: Contribution to journalArticle

A physical model-based method for retrieving urban land surface temperatures under cloudy conditions

Fu, P., Xie, Y., Weng, Q., Myint, S., Meacham-Hensold, K. & Bernacchi, C., Sep 1 2019, In : Remote Sensing of Environment. 230, 111191.

Research output: Contribution to journalArticle

A point mutation in atpC1 raises the redox potential of the Arabidopsis chloroplast ATP synthase γ-subunit regulatory disulfide above the range of thioredoxin modulation

Wu, G., Ortiz-Flores, G., Ortiz-Lopez, A. & Ort, D. R., Dec 21 2007, In : Journal of Biological Chemistry. 282, 51, p. 36782-36789 8 p.

Research output: Contribution to journalArticle

Apoplastic invertase and its enhanced expression and post-translation control during fruit maturation and ripening

Zhou, L., Chen, C. C., Ming, R., Christopher, D. A. & Paull, R. E., Sep 2003, In : Journal of the American Society for Horticultural Science. 128, 5, p. 628-635 8 p.

Research output: Contribution to journalArticle

Open Access

A population structure and genome-wide association analysis on the USDA soybean germplasm collection

Bandillo, N., Jarquin, D., Song, Q., Nelson, R., Cregan, P., Specht, J. & Lorenz, A., Nov 2015, In : Plant Genome. 8, 3

Research output: Contribution to journalArticle

Apparent nitrogen recovery from fall-applied ammoniated phosphates and ammonium sulfate fertilizers

Fernández, F. G., Hoeft, R. G., Randall, G. W., Vetsch, J., Greer, K., Nafziger, E. D. & Villamil, M. B., Nov 1 2010, In : Agronomy Journal. 102, 6, p. 1674-1681 8 p.

Research output: Contribution to journalArticle

Application of sequence-independent amplification (SIA) for the identification of RNA viruses in bioenergy crops

Agindotan, B. O., Ahonsi, M. O., Domier, L. L., Gray, M. E. & Bradley, C. A., Oct 1 2010, In : Journal of Virological Methods. 169, 1, p. 119-128 10 p.

Research output: Contribution to journalArticle

Application of thiophanate-methyl at different host growth stages for management of sclerotinia stem rot in soybean

Mueller, D. S., Bradley, C. A., Grau, C. R., Gaska, J. M., Kurle, J. E. & Pedersen, W. L., Oct 1 2004, In : Crop Protection. 23, 10, p. 983-988 6 p.

Research output: Contribution to journalArticle

Application of visible and near-infrared spectroscopy to classification of Miscanthus species

Jin, X., Chen, X., Xiao, L., Shi, C., Chen, L., Yu, B., Yi, Z., Yoo, J. H., Heo, K., Yu, C. Y., Yamada, T., Sacks, E. J. & Peng, J., Mar 2017, In : PloS one. 12, 4, e0171360.

Research output: Contribution to journalArticle

Application timing and soil factors affect sulfentrazone phytotoxicity to two soybean (Glycine max (L.) Merr.) cultivars

Reiling, K. L., Simmons, F. W., Riechers, D. E. & Steckel, L. E., Mar 1 2006, In : Crop Protection. 25, 3, p. 230-234 5 p.

Research output: Contribution to journalArticle

Applying an integrated refuge to manage western corn rootworm (Coleoptera: Chrysomelidae): Effects on survival, fitness, and selection pressure

Petzold-Maxwell, J. L., Alves, A. P., Estes, R. E., Gray, M. E., Meinke, L. J., Shields, E. J., Thompson, S. D., Tinsley, N. A. & Gassmann, A. J., Oct 21 2013, In : Journal of economic entomology. 106, 5, p. 2195-2207 13 p.

Research output: Contribution to journalArticle

A process-based model to predict the effects of climatic change on leaf isoprene emission rates

Martin, M. J., Stirling, C. M., Humphries, S. W. & Long, S. P., Jul 1 2000, In : Ecological Modelling. 131, 2-3, p. 161-174 14 p.

Research output: Contribution to journalArticle

A public–industry partnership for enhancing corn nitrogen research and datasets: Project description, methodology, and outcomes

Kitchen, N. R., Shanahan, J. F., Ransom, C. J., Bandura, C. J., Bean, G. M., Camberato, J. J., Carter, P. R., Clark, J. D., Ferguson, R. B., Fernández, F. G., Franzen, D. W., Laboski, C. A. M., Nafziger, E. D., Qing, Z., Sawyer, J. E. & Shafer, M., Sep 1 2017, In : Agronomy Journal. 109, 5, p. 2371-2388 18 p.

Research output: Contribution to journalArticle

A public program to evaluate commercial soybean cultivars for pathogen and pest resistance

Chawla, S., Bowen, C. R., Slaminko, T. L., Hobbs, H. A. & Hartman, G. L., Apr 16 2013, In : Plant disease. 97, 5, p. 568-578 11 p.

Research output: Contribution to journalArticle

A putative autonomous 20.5 kb-CACTA transposon insertion in an F3'H allele identifies a new CACTA transposon subfamily in glycine max

Zabala, G. & Vodkin, L., Dec 1 2008, In : BMC Plant Biology. 8, 124.

Research output: Contribution to journalArticle

A putative defective interfering RNA from Bean pod mottle virus

Sundararaman, V. P., Stromvik, M. V. & Vodkin, L. O., Jan 1 2000, In : Plant disease. 84, 12, p. 1309-1313 5 p.

Research output: Contribution to journalArticle

A qualitative assessment tool for ecologically based stormwater systems

Moore, T., Hutchinson, S. L. & Christianson, R. D., Aug 1 2012, In : Ecological Engineering. 45, p. 70-79 10 p.

Research output: Contribution to journalArticle

A quantitative assay for Amaranthus palmeri identification

Murphy, B. P., Plewa, D. E., Phillippi, E., Bissonnette, S. M. & Tranel, P. J., Nov 2017, In : Pest Management Science. 73, 11, p. 2221-2224 4 p.

Research output: Contribution to journalArticle

A quantitative review comparing the yields of two candidate C4 perennial biomass crops in relation to nitrogen, temperature and water

Heaton, E., Voigt, T. & Long, S. P., Jul 2004, In : Biomass and Bioenergy. 27, 1, p. 21-30 10 p.

Research output: Contribution to journalArticle

Aquatic herbicides and herbicide contaminants: In vitro cytotoxicity and cell-cycle analysis

Freeman, J. L. & Rayburn, A. L., May 29 2006, In : Environmental Toxicology. 21, 3, p. 256-263 8 p.

Research output: Contribution to journalArticle

Arabidopsis transcript and metabolite profiles: Ecotype-specific responses to open-air elevated [CO2]

Li, P., Ainsworth, E. A., Leakey, A. D. B., Ulanov, A., Lozovaya, V., Ort, D. R. & Bohnert, H. J., Nov 1 2008, In : Plant, Cell and Environment. 31, 11, p. 1673-1687 15 p.

Research output: Contribution to journalArticle

Arabidopsis TTR1 causes LRR-dependent lethal systemic necrosis, rather than systemic acquired resistance, to tobacco ringspot virus

Nam, M., Koh, S., Kim, S. U., Domier, L. L., Jeon, J. H., Kim, H. G., Lee, S. H., Bent, A. F. & Moon, J. S., Nov 1 2011, In : Molecules and Cells. 32, 5, p. 421-429 9 p.

Research output: Contribution to journalArticle

Arable weeds, cover crops, and tillage drive soil microbial community composition in organic cropping systems

Wortman, S. E., Drijber, R. A., Francis, C. A. & Lindquist, J. L., Oct 1 2013, In : Applied Soil Ecology. 72, p. 232-241 10 p.

Research output: Contribution to journalArticle

A rapid chemiluminescent detection method for barley yellow dwarf virus

Fouly, H. M., Domier, L. L. & D'Arcy, C. J., Sep 1992, In : Journal of Virological Methods. 39, 3, p. 291-298 8 p.

Research output: Contribution to journalArticle

Archaeophytopathology of Phakopsora pachyrhizi, the soybean rust pathogen

Haudenshield, J. S. & Hartman, G. L., May 1 2015, In : Plant disease. 99, 5, p. 575-579 5 p.

Research output: Contribution to journalArticle

A realistic meteorological assessment of perennial biofuel crop deployment: a Southern Great Plains perspective

Wagner, M., Wang, M., Miguez-Macho, G., Miller, J., VanLoocke, A., Bagley, J. E., Bernacchi, C. J. & Georgescu, M., Jun 2017, In : GCB Bioenergy. 9, 6, p. 1024-1041 18 p.

Research output: Contribution to journalArticle

A rearrangement resulting in small tandem repeats in the F3′5′H gene of white flower genotypes is associated with the soybean W1 locus

Zabala, G. & Vodkin, L. O., Jul 2007, In : Crop Science. 47, SUPPL. 2

Research output: Contribution to journalArticle

Areawide suppression of European corn borer with Bt maize reaps savings to non-Bt maize growers

Hutchison, W. D., Burkness, E. C., Mitchell, P. D., Moon, R. D., Leslie, T. W., Fleischer, S. J., Abrahamson, M., Hamilton, K. L., Steffey, K. L., Gray, M. E., Hellmich, R. L., Kaster, L. V., Hunt, T. E., Wright, R. J., Pecinovsky, K., Rabaey, T. L., Flood, B. R. & Raun, E. S., Oct 8 2010, In : Science. 330, 6001, p. 222-225 4 p.

Research output: Contribution to journalArticle

A regional comparison of water use efficiency for miscanthus, switchgrass and maize

VanLoocke, A., Twine, T. E., Zeri, M. & Bernacchi, C. J., Oct 15 2012, In : Agricultural and Forest Meteorology. 164, p. 82-95 14 p.

Research output: Contribution to journalArticle

A regionally-adapted implementation of conservation agriculture delivers rapid improvements to soil properties associated with crop yield stability

Williams, A., Jordan, N. R., Smith, R. G., Hunter, M. C., Kammerer, M., Kane, D. A., Koide, R. T. & Davis, A. S., Dec 1 2018, In : Scientific reports. 8, 1, 8467.

Research output: Contribution to journalArticle

A remorin gene is implicated in quantitative disease resistance in maize

Jamann, T. M., Luo, X., Morales, L., Kolkman, J. M., Chung, C. L. & Nelson, R. J., Mar 1 2016, In : Theoretical and Applied Genetics. 129, 3, p. 591-602 12 p.

Research output: Contribution to journalArticle

A retrospective DNA marker assessment of the development of insect resistant soybean

Narvel, J. M., Walker, D. R., Rector, B. G., All, J. N., Parrott, W. A. & Boerma, H. R., Jan 1 2001, In : Crop Science. 41, 6, p. 1931-1939 9 p.

Research output: Contribution to journalArticle

Are we approaching a water ceiling to maize yields in the United States?

Delucia, E. H., Chen, S., Guan, K., Peng, B., Li, Y., Gomez-Casanovas, N., Kantola, I. B., Bernacchi, C., Huang, Y., Long, S. P. & Ort, D. R., Jun 18 2019, In : Ecosphere. 10, 6, e02773.

Research output: Contribution to journalArticle

Open Access

A Rhizobium meliloti lipopolysaccharide mutant altered in competitiveness for nodulation of alfalfa

Lagares, A., Caetano-Anolles, G., Niehaus, K., Lorenzen, J., Ljunggren, H. D., Puhler, A. & Favelukes, G., Jan 1 1992, In : Journal of bacteriology. 174, 18, p. 5941-5952 12 p.

Research output: Contribution to journalArticle

A roadmap for functional structural variants in the soybean genome

Anderson, J. E., Kantar, M. B., Kono, T. Y., Fu, F., Stec, A. O., Song, Q., Cregan, P. B., Specht, J. E., Diers, B. W., Cannon, S. B., McHale, L. K. & Stupar, R. M., Jan 1 2014, In : G3: Genes, Genomes, Genetics. 4, 7, p. 1307-1318 12 p.

Research output: Contribution to journalArticle

A robust plant rna isolation method suitable for affymetrix genechip analysis and quantitative real-time rt-pcr

Bilgin, D. D., Delucia, E. H. & Clough, S. J., Mar 2009, In : Nature Protocols. 4, 3, p. 333-340 8 p.

Research output: Contribution to journalArticle

Artificial selection for determinate growth habit in soybean

Tian, Z., Wang, X., Lee, R., Li, Y., Specht, J. E., Nelson, R. L., McClean, P. E., Qiu, L. & Ma, J., May 11 2010, In : Proceedings of the National Academy of Sciences of the United States of America. 107, 19, p. 8563-8568 6 p.

Research output: Contribution to journalArticle

A second T-region of the soybean-supervirulent chrysopine-type Ti plasmid pTiChry5, and construction of a fully disarmed vir helper plasmid

Palanichelvam, K., Oger, P., Clough, S. J., Cha, C., Bent, A. F. & Farrand, S. K., Jan 1 2000, In : Molecular Plant-Microbe Interactions. 13, 10, p. 1081-1091 11 p.

Research output: Contribution to journalArticle

A selected set of trinucleotide simple sequence repeat markers for soybean cultivar identification

Song, Q. J., Quigley, C. V., Nelson, R. L., Carter, T. E., Boerma, H. R., Strachan, J. L. & Cregan, P. B., Dec 1 1999, In : Plant Varieties and Seeds. 12, 3, p. 207-220 14 p.

Research output: Contribution to journalArticle

A simple system for promoting flowering of upland switchgrass in the greenhouse

Castro, J. C., Boe, A. & Lee, D. K., Nov 1 2011, In : Crop Science. 51, 6, p. 2607-2614 8 p.

Research output: Contribution to journalArticle

A single amino acid converts a repressor to an activator of flowering

Hanzawa, Y., Money, T. & Bradley, D., May 24 2005, In : Proceedings of the National Academy of Sciences of the United States of America. 102, 21, p. 7748-7753 6 p.

Research output: Contribution to journalArticle

A single dominant gene for resistance to the soybean aphid in the soybean cultivar dowling

Hill, C. B., Li, Y. & Hartman, G. L., Jul 1 2006, In : Crop Science. 46, 4, p. 1601-1605 5 p.

Research output: Contribution to journalArticle

A single nucleotide change in the overlapping MP and CP reading frames results in differences in symptoms caused by two isolates of Youcai mosaic virus

Ju, H. K., Kim, I. H., Hu, W. X., Kim, B., Choi, G. W., Kim, J., Lim, Y. P., Domier, L. L., Hammond, J. & Lim, H. S., Jan 1 2019, In : Archives of Virology.

Research output: Contribution to journalArticle