Research Output 1975 2020

Article

A physical map of the papaya genome with integrated genetic map and genome sequence

Yu, Q., Tong, E., Skelton, R. L., Bowers, J. E., Jones, M. R., Murray, J. E., Hou, S., Guan, P., Acob, R. A., Luo, M. C., Moore, P. H., Alam, M., Paterson, A. H. & Ming, R. R., Aug 7 2009, In : BMC genomics. 10, 1 p., 1471.

Research output: Contribution to journalArticle

Carica
Genome
Genetic Recombination
Sex Chromosomes
Genomics

A physical model-based method for retrieving urban land surface temperatures under cloudy conditions

Fu, P., Xie, Y., Weng, Q., Myint, S., Meacham-Hensold, K. & Bernacchi, C., Sep 1 2019, In : Remote Sensing of Environment. 230, 111191.

Research output: Contribution to journalArticle

physical models
surface temperature
land surface
Mean square error
Temperature
Salix
Climate
climate
Temperature
Photosynthesis

A point mutation in atpC1 raises the redox potential of the Arabidopsis chloroplast ATP synthase γ-subunit regulatory disulfide above the range of thioredoxin modulation

Wu, G., Ortiz-Flores, G., Ortiz-Lopez, A. & Ort, D. R., Dec 21 2007, In : Journal of Biological Chemistry. 282, 51, p. 36782-36789 8 p.

Research output: Contribution to journalArticle

Chloroplast Proton-Translocating ATPases
Thioredoxins
Point Mutation
Arabidopsis
Disulfides
Quantitative Trait Loci
Brassica
harvest date
broccoli
chromosome mapping

A population structure and genome-wide association analysis on the USDA soybean germplasm collection

Bandillo, N., Jarquin, D., Song, Q., Nelson, R., Cregan, P., Specht, J. & Lorenz, A., Nov 2015, In : Plant Genome. 8, 3

Research output: Contribution to journalArticle

United States Department of Agriculture
Genome-Wide Association Study
germplasm conservation
Soybeans
USDA

Apparent nitrogen recovery from fall-applied ammoniated phosphates and ammonium sulfate fertilizers

Fernández, F. G., Hoeft, R. G., Randall, G. W., Vetsch, J., Greer, K., Nafziger, E. D. & Villamil, M. B., Nov 2010, In : Agronomy Journal. 102, 6, p. 1674-1681 8 p.

Research output: Contribution to journalArticle

monoammonium phosphate
ammonium sulfate
field capacity
fertilizers
phosphates

Application of sequence-independent amplification (SIA) for the identification of RNA viruses in bioenergy crops

Agindotan, B. O., Ahonsi, M. O., Domier, L. L., Gray, M. E. & Bradley, C. A., Oct 1 2010, In : Journal of Virological Methods. 169, 1, p. 119-128 10 p.

Research output: Contribution to journalArticle

RNA Viruses
Panicum
Viruses
Mosaic Viruses
Tymoviridae

Application of thiophanate-methyl at different host growth stages for management of sclerotinia stem rot in soybean

Mueller, D. S., Bradley, C. A., Grau, C. R., Gaska, J. M., Kurle, J. E. & Pedersen, W. L., Oct 1 2004, In : Crop Protection. 23, 10, p. 983-988 6 p.

Research output: Contribution to journalArticle

thiophanate-methyl
Sclerotinia
stem rot
developmental stages
soybeans

Application of visible and near-infrared spectroscopy to classification of Miscanthus species

Jin, X., Chen, X., Xiao, L., Shi, C., Chen, L., Yu, B., Yi, Z., Yoo, J. H., Heo, K., Yu, C. Y., Yamada, T., Sacks, E. J. & Peng, J., Mar 2017, In : PloS one. 12, 4, e0171360.

Research output: Contribution to journalArticle

Miscanthus
Near infrared spectroscopy
Near-Infrared Spectroscopy
near-infrared spectroscopy
Least-Squares Analysis

Application timing and soil factors affect sulfentrazone phytotoxicity to two soybean (Glycine max (L.) Merr.) cultivars

Reiling, K. L., Simmons, F. W., Riechers, D. E. & Steckel, L. E., Mar 1 2006, In : Crop Protection. 25, 3, p. 230-234 5 p.

Research output: Contribution to journalArticle

sulfentrazone
application timing
phytotoxicity
Glycine max
soybeans

Applying an integrated refuge to manage western corn rootworm (Coleoptera: Chrysomelidae): Effects on survival, fitness, and selection pressure

Petzold-Maxwell, J. L., Alves, A. P., Estes, R. E., Gray, M. E., Meinke, L. J., Shields, E. J., Thompson, S. D., Tinsley, N. A. & Gassmann, A. J., Oct 21 2013, In : Journal of economic entomology. 106, 5, p. 2195-2207 13 p.

Research output: Contribution to journalArticle

Diabrotica virgifera virgifera
Chrysomelidae
refuge
Bacillus thuringiensis
fitness

A process-based model to predict the effects of climatic change on leaf isoprene emission rates

Martin, M. J., Stirling, C. M., Humphries, S. W. & Long, S. P., Jul 1 2000, In : Ecological Modelling. 131, 2-3, p. 161-174 14 p.

Research output: Contribution to journalArticle

isoprene
climate change
carbon dioxide
photon flux density
temperature

A public–industry partnership for enhancing corn nitrogen research and datasets: Project description, methodology, and outcomes

Kitchen, N. R., Shanahan, J. F., Ransom, C. J., Bandura, C. J., Bean, G. M., Camberato, J. J., Carter, P. R., Clark, J. D., Ferguson, R. B., Fernández, F. G., Franzen, D. W., Laboski, C. A. M., Nafziger, E. D., Qing, Z., Sawyer, J. E. & Shafer, M., Sep 1 2017, In : Agronomy Journal. 109, 5, p. 2371-2388 18 p.

Research output: Contribution to journalArticle

corn
nitrogen
weather
Land Grant universities
soil

A public program to evaluate commercial soybean cultivars for pathogen and pest resistance

Chawla, S., Bowen, C. R., Slaminko, T. L., Hobbs, H. A. & Hartman, G. L., Apr 16 2013, In : Plant disease. 97, 5, p. 568-578 11 p.

Research output: Contribution to journalArticle

pest resistance
soybeans
pathogens
cultivars
seed industry
transposons
Glycine max
flavonoids
soybeans
alleles

A putative defective interfering RNA from Bean pod mottle virus

Sundararaman, V. P., Stromvik, M. V. & Vodkin, L. O., Jan 1 2000, In : Plant disease. 84, 12, p. 1309-1313 5 p.

Research output: Contribution to journalArticle

Bean pod mottle virus
RNA
soybeans
pods
Comovirus
Boidae
Neuropeptides
Pipelines
Cations
Genes

A quantitative assay for Amaranthus palmeri identification

Murphy, B. P., Plewa, D. E., Phillippi, E., Bissonnette, S. M. & Tranel, P. J., Nov 2017, In : Pest Management Science. 73, 11, p. 2221-2224 4 p.

Research output: Contribution to journalArticle

Amaranthus palmeri
assays
Amaranthus
quantitative polymerase chain reaction
Conservation Reserve Program
Miscanthus giganteus
Panicum virgatum
energy crops
Crops
Biomass

Aquatic herbicides and herbicide contaminants: In vitro cytotoxicity and cell-cycle analysis

Freeman, J. L. & Rayburn, A. L., May 29 2006, In : Environmental Toxicology. 21, 3, p. 256-263 8 p.

Research output: Contribution to journalArticle

Herbicides
Cytotoxicity
herbicide
Cell Cycle
Diquat

Arabidopsis transcript and metabolite profiles: Ecotype-specific responses to open-air elevated [CO2]

Li, P., Ainsworth, E. A., Leakey, A. D. B., Ulanov, A., Lozovaya, V., Ort, D. R. & Bohnert, H. J., Nov 1 2008, In : Plant, Cell and Environment. 31, 11, p. 1673-1687 15 p.

Research output: Contribution to journalArticle

Ecotype
ecotypes
Arabidopsis
carbon dioxide
metabolites

Arable weeds, cover crops, and tillage drive soil microbial community composition in organic cropping systems

Wortman, S. E., Drijber, R. A., Francis, C. A. & Lindquist, J. L., Oct 1 2013, In : Applied Soil Ecology. 72, p. 232-241 10 p.

Research output: Contribution to journalArticle

cover crop
cover crops
tillage
community composition
weed

A rapid chemiluminescent detection method for barley yellow dwarf virus

Fouly, H. M., Domier, L. L. & D'Arcy, C. J., Sep 1992, In : Journal of Virological Methods. 39, 3, p. 291-298 8 p.

Research output: Contribution to journalArticle

Luteovirus
X-Ray Film
Nylons
Complementary DNA
Enzyme-Linked Immunosorbent Assay

Archaeophytopathology of Phakopsora pachyrhizi, the soybean rust pathogen

Haudenshield, J. S. & Hartman, G. L., May 1 2015, In : Plant disease. 99, 5, p. 575-579 5 p.

Research output: Contribution to journalArticle

Phakopsora pachyrhizi
soybean rust
pathogens
herbaria
DNA

A realistic meteorological assessment of perennial biofuel crop deployment: a Southern Great Plains perspective

Wagner, M., Wang, M., Miguez-Macho, G., Miller, J., VanLoocke, A., Bagley, J. E., Bernacchi, C. & Georgescu, M., Jun 2017, In : GCB Bioenergy. 9, 6, p. 1024-1041 18 p.

Research output: Contribution to journalArticle

energy crops
Biofuels
biofuel
bioenergy
Crops
tandem repeat sequences
flavonoids
soybeans
flowers
loci

Areawide suppression of European corn borer with Bt maize reaps savings to non-Bt maize growers

Hutchison, W. D., Burkness, E. C., Mitchell, P. D., Moon, R. D., Leslie, T. W., Fleischer, S. J., Abrahamson, M., Hamilton, K. L., Steffey, K. L., Gray, M. E., Hellmich, R. L., Kaster, L. V., Hunt, T. E., Wright, R. J., Pecinovsky, K., Rabaey, T. L., Flood, B. R. & Raun, E. S., Oct 8 2010, In : Science. 330, 6001, p. 222-225 4 p.

Research output: Contribution to journalArticle

Bacillus thuringiensis
Zea mays
Agriculture
Insects
Motivation

A regional comparison of water use efficiency for miscanthus, switchgrass and maize

VanLoocke, A., Twine, T. E., Zeri, M. & Bernacchi, C., Oct 15 2012, In : Agricultural and Forest Meteorology. 164, p. 82-95 14 p.

Research output: Contribution to journalArticle

Miscanthus
Panicum virgatum
water use efficiency
maize
corn

A remorin gene is implicated in quantitative disease resistance in maize

Jamann, T. M., Luo, X., Morales, L., Kolkman, J. M., Chung, C. L. & Nelson, R. J., Mar 1 2016, In : Theoretical and Applied Genetics. 129, 3, p. 591-602 12 p.

Research output: Contribution to journalArticle

Disease Resistance
Zea mays
disease resistance
leaf blight
Quantitative Trait Loci

Are we approaching a water ceiling to maize yields in the United States?

Delucia, E. H., Chen, S., Guan, K., Peng, B., Li, Y., Gomez-Casanovas, N., Kantola, I. B., Bernacchi, C., Huang, Y., Long, S. P. & Ort, D. R., Jun 18 2019, In : Ecosphere. 10, 6, e02773.

Research output: Contribution to journalArticle

Open Access
maize
corn
vapor pressure
water
water use efficiency

A roadmap for functional structural variants in the soybean genome

Anderson, J. E., Kantar, M. B., Kono, T. Y., Fu, F., Stec, A. O., Song, Q., Cregan, P. B., Specht, J. E., Diers, B. W., Cannon, S. B., McHale, L. K. & Stupar, R. M., Jan 1 2014, In : G3: Genes, Genomes, Genetics. 4, 7, p. 1307-1318 12 p.

Research output: Contribution to journalArticle

Soybeans
Genome
Genes
Genomic Structural Variation
Gene Dosage

A robust plant rna isolation method suitable for affymetrix genechip analysis and quantitative real-time rt-pcr

Bilgin, D. D., Delucia, E. H. & Clough, S. J., Mar 2009, In : Nature Protocols. 4, 3, p. 333-340 8 p.

Research output: Contribution to journalArticle

Plant RNA
RNA
Real-Time Polymerase Chain Reaction
Throughput
Plant Preparations

Artificial selection for determinate growth habit in soybean

Tian, Z., Wang, X., Lee, R., Li, Y., Specht, J. E., Nelson, R. L., McClean, P. E., Qiu, L. & Ma, J., May 11 2010, In : Proceedings of the National Academy of Sciences of the United States of America. 107, 19, p. 8563-8568 6 p.

Research output: Contribution to journalArticle

Soybeans
Habits
Arabidopsis
Growth
Alleles

A second T-region of the soybean-supervirulent chrysopine-type Ti plasmid pTiChry5, and construction of a fully disarmed vir helper plasmid

Palanichelvam, K., Oger, P., Clough, S. J., Cha, C., Bent, A. F. & Farrand, S. K., Jan 1 2000, In : Molecular Plant-Microbe Interactions. 13, 10, p. 1081-1091 11 p.

Research output: Contribution to journalArticle

Plant Tumor-Inducing Plasmids
Soybeans
opines
plasmids
Plasmids

A selected set of trinucleotide simple sequence repeat markers for soybean cultivar identification

Song, Q. J., Quigley, C. V., Nelson, R. L., Carter, T. E., Boerma, H. R., Strachan, J. L. & Cregan, P. B., Dec 1 1999, In : Plant Varieties and Seeds. 12, 3, p. 207-220 14 p.

Research output: Contribution to journalArticle

cultivar identification
Soybeans
Microsatellite Repeats
microsatellite repeats
soybeans

A simple system for promoting flowering of upland switchgrass in the greenhouse

Castro, J. C., Boe, A. & Lee, D., Nov 1 2011, In : Crop Science. 51, 6, p. 2607-2614 8 p.

Research output: Contribution to journalArticle

Panicum virgatum
highlands
photoperiod
flowering
greenhouses

A single amino acid converts a repressor to an activator of flowering

Hanzawa, Y., Money, T. & Bradley, D., May 24 2005, In : Proceedings of the National Academy of Sciences of the United States of America. 102, 21, p. 7748-7753 6 p.

Research output: Contribution to journalArticle

Amino Acids
Phosphatidylethanolamine Binding Protein
Proteins
Gene Duplication
Arabidopsis

A single dominant gene for resistance to the soybean aphid in the soybean cultivar dowling

Hill, C. B., Li, Y. & Hartman, G. L., Jul 1 2006, In : Crop Science. 46, 4, p. 1601-1605 5 p.

Research output: Contribution to journalArticle

Aphis glycines
dominant genes
soybeans
Aphidoidea
cultivars

A single nucleotide change in the overlapping MP and CP reading frames results in differences in symptoms caused by two isolates of Youcai mosaic virus

Ju, H. K., Kim, I. H., Hu, W. X., Kim, B., Choi, G. W., Kim, J., Lim, Y. P., Domier, L. L., Hammond, J. & Lim, H. S., Jan 1 2019, In : Archives of Virology.

Research output: Contribution to journalArticle

Mosaic Viruses
Reading Frames
Capsid Proteins
Nucleotides
Proteins

A small scale procedure for the isolation of transport competent vesicles from plant tissues

Giannini, J. L., Ruiz-Cristin, J. & Briskin, D. P., Nov 1 1988, In : Analytical Biochemistry. 174, 2, p. 561-567 7 p.

Research output: Contribution to journalArticle

Transport Vesicles
Beta vulgaris
Tissue
Cell membranes
Soybeans

A SNARE-like protein and biotin are implicated in soybean cyst nematode virulence

Bekal, S., Domier, L. L., Gonfa, B., Lakhssassi, N., Meksem, K. & Lambert, K. N., Dec 1 2015, In : PloS one. 10, 12, e0145601.

Research output: Contribution to journalArticle

SNARE Proteins
Heterodera glycines
biotin
Biotin
Soybeans

A soft selective sweep during rapid evolution of gentle behaviour in an Africanized honeybee

Avalos, A., Pan, H., Li, C., Acevedo-Gonzalez, J. P., Rendon, G., Fields, C. J., Brown, P. J., Giray, T., Robinson, G. E., Hudson, M. E. & Zhang, G., Dec 1 2017, In : Nature communications. 8, 1, 1550.

Research output: Contribution to journalArticle

Puerto Rico
loci
genome
Genes
Genome

A soybean cell wall protein is affected by seed color genotype

Lindstrom, J. T. & Vodkin, L. O., Jun 1991, In : Plant Cell. 3, 6, p. 561-571 11 p.

Research output: Contribution to journalArticle

Soybeans
Cell Wall
Seed
Seeds
Color

A soybean lectin-GFP fusion labels the vacuoles in developing Arabidopsis thaliana embryos

Darnowski, D. & Vodkin, L. O., Jun 8 2002, In : Plant Cell Reports. 20, 11, p. 1033-1038 6 p.

Research output: Contribution to journalArticle

green fluorescent protein
embryo (plant)
lectins
vacuoles
Arabidopsis thaliana

Assembling allopolyploid genomes: No longer formidable

Ming, R. R. & Man Wai, C., Jan 31 2015, In : Genome biology. 16, 1, 27.

Research output: Contribution to journalArticle

allopolyploidy
genome
Genome
Chromosome Mapping
Firearms

Assembly and annotation of a draft genome sequence for Glycine latifolia, a perennial wild relative of soybean

Liu, Q., Chang, S., Hartman, G. L. & Domier, L. L., Jul 2018, In : Plant Journal. 95, 1, p. 71-85 15 p.

Research output: Contribution to journalArticle

wild relatives
Soybeans
Glycine
Genome
soybeans

Assembly of allele-aware, chromosomal-scale autopolyploid genomes based on Hi-C data

Zhang, X., Zhang, S., Zhao, Q., Ming, R. R. & Tang, H., Aug 1 2019, In : Nature Plants. 5, 8, p. 833-845 13 p.

Research output: Contribution to journalArticle

autopolyploidy
alleles
genome
chromosomes
diploidy

Assessing causes of yield gaps in agricultural areas with diversity in climate and soils

Rattalino Edreira, J. I., Mourtzinis, S., Conley, S. P., Roth, A. C., Ciampitti, I. A., Licht, M. A., Kandel, H., Kyveryga, P. M., Lindsey, L. E., Mueller, D. S., Naeve, S. L., Nafziger, E. D., Specht, J. E., Stanley, J., Staton, M. J. & Grassini, P., Dec 15 2017, In : Agricultural and Forest Meteorology. 247, p. 170-180 11 p.

Research output: Contribution to journalArticle

agricultural land
climate
soil
soybean
sowing date

Assessing safe food handling knowledge and practices of food service managers in Doha, Qatar

Asim, H. S., Elnemr, I., Goktepe, I., Feng, H., Park, H. K., Alzeyara, S., AlHajri, M. & Kushad, M. M., Jul 1 2019, In : Food Science and Technology International. 25, 5, p. 440-448 9 p.

Research output: Contribution to journalArticle

Qatar
Food Services
food handling
Food Handling
food service