Research Output 1975 2020

Article

Allelic variants in the PRR37 gene and the human-mediated dispersal and diversification of sorghum

Klein, R. R., Miller, F. R., Dugas, D. V., Brown, P. J., Burrell, A. M. & Klein, P. E., Sep 20 2015, In : Theoretical and Applied Genetics. 128, 9, p. 1669-1683 15 p.

Research output: Contribution to journalArticle

Sorghum
Regulator Genes
alleles
genes
Alleles

Allosteric Control of a Plant Receptor Kinase through S-Glutathionylation

Moffett, A. S., Bender, K. W., Huber, S. C. & Shukla, D., Dec 5 2017, In : Biophysical journal. 113, 11, p. 2354-2363 10 p.

Research output: Contribution to journalArticle

Protein S
Protein Kinases
Oxidation-Reduction
Phosphotransferases
Brassinosteroids

A low-cost, high-throughput polyacrylamide gel electrophoresis system for genotyping with microsateilite DNA markers

Wang, D., Shi, J., Carlson, S. R., Cregan, P. B., Ward, R. W. & Diers, B. W., Sep 1 2003, In : Crop Science. 43, 5, p. 1828-1832 5 p.

Research output: Contribution to journalArticle

genotyping
polyacrylamide gel electrophoresis
gels
genetic markers
electrophoresis

Alteration of maize kernel phytic acid levels by recurrent selection for protein and oil

Raboy, V., Below, F. E. & Dickinson, D. B., Jan 1 1989, In : Journal of Heredity. 80, 4, p. 311-315 5 p.

Research output: Contribution to journalArticle

Phytic Acid
Zea mays
Oils
Proteins
Nutritive Value

Alteration of mammalian-cell toxicity of pesticides by structural iron(II) in ferruginous smectite

Sorensen, K. C., Stucki, J. W., Warner, R. E. & Plewa, M. J., Aug 15 2004, In : Environmental Science and Technology. 38, 16, p. 4383-4389 7 p.

Research output: Contribution to journalArticle

Pesticides
smectite
Toxicity
Iron
pesticide

Altered Belowground Carbon Cycling Following Land-Use Change to Perennial Bioenergy Crops

Anderson-Teixeira, K. J., Masters, M. D., Black, C. K., Zeri, M., Hussain, M. Z., Bernacchi, C. & Delucia, E. H., Jan 7 2013, In : Ecosystems. 16, 3, p. 508-520 13 p.

Research output: Contribution to journalArticle

energy crops
bioenergy
Land use
land use change
Crops

Altered fatty acid concentrations in a temperature-sensitive mutant of Saccharomyces cerevisiae defective in cell division and respiration

Gentile, J. M. & Plewa, M. J., Jun 1975, In : Plant Science Letters. 4, 6, p. 343-352 10 p.

Research output: Contribution to journalArticle

Cell Respiration
cell respiration
Cell Division
Saccharomyces cerevisiae
cell division

Altered physiological function, not structure, drives increased radiation-use efficiency of soybean grown at elevated CO2

Rascher, U., Biskup, B., Leakey, A., McGrath, J. M. & Ainsworth, E., Jun 24 2010, In : Photosynthesis research. 105, 1, p. 15-25 11 p.

Research output: Contribution to journalArticle

radiation use efficiency
Soybeans
carbon dioxide
Radiation
soybeans

Alternative sigma factor RpoN and its modulation protein YhbH are indispensable for Erwinia amylovora virulence

Ancona, V., Li, W. & Zhao, Y., Jan 1 2014, In : Molecular Plant Pathology. 15, 1, p. 58-66 9 p.

Research output: Contribution to journalArticle

Erwinia amylovora
sigma factors
Sigma Factor
pathogenicity
hypersensitive response

Alternative to hand-weeding volunteer potato (Solanum tuberosum) in carrot (Daucus carota)

Williams, M. M. & Boydston, R. A., Oct 1 2005, In : Weed Technology. 19, 4, p. 1050-1055 6 p.

Research output: Contribution to journalArticle

Daucus carota
Solanum tuberosum
carrots
volunteers
weed control

A LysM receptor-like kinase plays a critical role in chitin signaling and fungal resistance in Arabidopsis

Wan, J., Zhang, X. C., Neece, D., Ramonell, K. M., Clough, S., Kim, S. Y., Stacey, M. G. & Stacey, G., Feb 1 2008, In : Plant Cell. 20, 2, p. 471-481 11 p.

Research output: Contribution to journalArticle

Chitin
chitin
Arabidopsis
phosphotransferases (kinases)
Phosphotransferases

Amaranthus hybridus can be pollinated frequently by A. tuberculatus under field conditions

Trucco, F., Jeschke, M. R., Rayburn, A. L. & Tranel, P. J., Jan 1 2005, In : Heredity. 94, 1, p. 64-70 7 p.

Research output: Contribution to journalArticle

Amaranthus
Herbicides
Herbicide Resistance
Alleles
Mutation Rate

Amaranthus hybridus populations resistant to triazine and acetolactate synthase-inhibiting herbicides

Maertens, K. D., Sprague, C. L., Tranel, P. J. & Hines, R. A., Feb 1 2004, In : Weed Research. 44, 1, p. 21-26 6 p.

Research output: Contribution to journalArticle

Amaranthus hybridus
acetolactate synthase
triazines
triazine
herbicide

A meta-analysis of elevated [CO2] effects on soybean (Glycine max) physiology, growth and yield

Ainsworth, E., Davey, P. A., Bernacchi, C., Dermody, O. C., Heaton, E. A., Moore, D. J., Morgan, P. B., Naidu, S. L., Ra, H. S. Y., Zhu, X. G., Curtis, P. S. & Long, S. P., Aug 15 2002, In : Global change biology. 8, 8, p. 695-709 15 p.

Research output: Contribution to journalArticle

Physiology
meta-analysis
Glycine
physiology
soybean
intercropping
meta-analysis
Meta-Analysis
shade
Greenhouse Effect

A method for determining the severity of sudden death syndrome in soybeans

Cui, D., Zhang, Q., Li, M., Slaminko, T. & Hartman, G. L., 2014, In : Transactions of the ASABE. 57, 2, p. 671-678 8 p.

Research output: Contribution to journalArticle

Sudden Death
Soybeans
soybean
death
leaf area

Amino acid differences in the N-terminal half of the polyprotein of Chinese turnip mosaic virus isolates affect symptom expression in Nicotiana benthamiana and radish

Hu, W. X., Seo, E. Y., Cho, I. S., Kim, J. K., Ju, H. K., Kim, I. H., Choi, G. W., Kim, B., Ahn, C. H., Domier, L. L., Oh, S. K., Hammond, J. & Lim, H. S., Jun 1 2019, In : Archives of Virology. 164, 6, p. 1683-1689 7 p.

Research output: Contribution to journalArticle

Raphanus
Mosaic Viruses
Polyproteins
Brassica napus
Tobacco

Amino acid metabolism in maize earshoots. Implications for assimilate preconditioning and nitrogen signaling.

Seebauer, J. R., Moose, S. P., Fabbri, B. J., Crossland, L. D. & Below, F. E., Dec 2004, In : Plant physiology. 136, 4, p. 4326-4334 9 p.

Research output: Contribution to journalArticle

amino acid metabolism
asparagine
Zea mays
Asparagine
Nitrogen

Ammonia flux measurements above a corn canopy using relaxed eddy accumulation and a flux gradient system

Nelson, A. J., Lichiheb, N., Koloutsou-Vakakis, S., Rood, M. J., Heuer, M., Myles, L. T., Joo, E., Miller, J. & Bernacchi, C., Jan 15 2019, In : Agricultural and Forest Meteorology. 264, p. 104-113 10 p.

Research output: Contribution to journalArticle

flux measurement
eddy
ammonia
maize
canopy
Organic carbon
organic soil
organic carbon
Soils
climate

A modified method for the production of 36ClL3- for use in plant nitrate transport studies

Ruiz-Cristin, J., Chodera, A. J. & Briskin, D. P., Oct 1989, In : Analytical Biochemistry. 182, 1, p. 146-150 5 p.

Research output: Contribution to journalArticle

Nitrates
Purification
Column chromatography
Electrolysis
Anions

Amplified fragment length polymorphism-based genetic relationships among weedy Amaranthus species

Wassom, J. J. & Tranel, P. J., Jul 1 2005, In : Journal of Heredity. 96, 4, p. 410-416 7 p.

Research output: Contribution to journalArticle

Amaranthus
genetic relationships
amplified fragment length polymorphism
Amaranthus palmeri
Amaranthus hybridus

Amplified fragment length polymorphism markers linked to a major quantitative trait locus controlling scab resistance in wheat

Bai, G., Kolb, F. L., Shaner, G. & Domier, L. L., Apr 1999, In : Phytopathology. 89, 4, p. 343-348 6 p.

Research output: Contribution to journalArticle

amplified fragment length polymorphism
quantitative trait loci
inflorescences
inbred lines
wheat

A multiplexed immunofluorescence method identifies Phakopsora pachyrhizi urediniospores and determines their viability

Vittal, R., Haudenshield, J. S. & Hartman, G. L., Dec 1 2012, In : Phytopathology. 102, 12, p. 1143-1152 10 p.

Research output: Contribution to journalArticle

Phakopsora pachyrhizi
fluorescent antibody technique
viability
fluorescein
spores

A Multi-Population Consensus Genetic Map Reveals Inconsistent Marker Order among Maps Likely Attributed to Structural Variations in the Apple Genome

Khan, M. A., Han, Y., Zhao, Y. F., Troggio, M. & Korban, S. S., Nov 5 2012, In : PloS one. 7, 11, e47864.

Research output: Contribution to journalArticle

Population Genetics
Malus
apples
Genes
Genome

A Multistate Study of the Association Between Glyphosate Resistance and EPSPS Gene Amplification in Waterhemp (Amaranthus tuberculatus)

Chatham, L. A., Bradley, K. W., Kruger, G. R., Martin, J. R., Owen, M. D. K., Peterson, D. E., Mithila, J. & Tranel, P. J., Jul 1 2015, In : Weed Science. 63, 3, p. 569-577 9 p.

Research output: Contribution to journalArticle

Amaranthus tuberculatus
gene amplification
glyphosate
phosphates
Amaranthus palmeri

AmyR Is a Novel Negative Regulator of Amylovoran Production in Erwinia amylovora

Wang, D., Korban, S. S., Pusey, P. L. & Zhao, Y., Sep 18 2012, In : PloS one. 7, 9, e45038.

Research output: Contribution to journalArticle

Erwinia amylovora
Genes
exopolysaccharides
mutants
knockout mutants

An adaptive management approach to improve water quality at a model dairy farm in Vermont, USA

Kominami, H. & Lovell, S. T., Mar 1 2012, In : Ecological Engineering. 40, p. 131-143 13 p.

Research output: Contribution to journalArticle

Dairies
adaptive management
Farms
Water quality
farm

An agent-based metapopulation model simulating virus-based biocontrol of Heterodera glycines

Anderson, S., Soman, C., Bekal, S., Domier, L., Lambert, K. & Bhalerao, K., Jan 1 2018, In : Journal of Nematology. 50, 2, p. 79-90 12 p.

Research output: Contribution to journalArticle

Heterodera glycines
biological control
virulence
viruses
Nematoda

Analyses of pig genomes provide insight into porcine demography and evolution

Groenen, M. A. M., Archibald, A. L., Uenishi, H., Tuggle, C. K., Takeuchi, Y., Rothschild, M. F., Rogel-Gaillard, C., Park, C., Milan, D., Megens, H. J., Li, S., Larkin, D. M., Kim, H., Frantz, L. A. F., Caccamo, M., Ahn, H., Aken, B. L., Anselmo, A., Anthon, C., Auvil, L. & 116 others, Badaoui, B., Beattie, C. W., Bendixen, C., Berman, D., Blecha, F., Blomberg, J., Bolund, L., Bosse, M., Botti, S., Bujie, Z., Bystrom, M., Capitanu, B., Carvalho-Silva, D., Chardon, P., Chen, C., Cheng, R., Choi, S. H., Chow, W., Clark, R. C., Clee, C., Crooijmans, R. P. M. A., Dawson, H. D., Dehais, P., De Sapio, F., Dibbits, B., Drou, N., Du, Z. Q., Eversole, K., Fadista, J., Fairley, S., Faraut, T., Faulkner, G. J., Fowler, K. E., Fredholm, M., Fritz, E., Gilbert, J. G. R., Giuffra, E., Gorodkin, J., Griffin, D. K., Harrow, J. L., Hayward, A., Howe, K., Hu, Z. L., Humphray, S. J., Hunt, T., Hornshoøj, H., Jeon, J. T., Jern, P., Jones, M., Jurka, J., Kanamori, H., Kapetanovic, R., Kim, J., Kim, J. H., Kim, K. W., Kim, T. H., Larson, G., Lee, K., Lee, K. T., Leggett, R., Lewin, H. A., Li, Y., Liu, W., Loveland, J. E., Lu, Y., Lunney, J. K., Ma, J., Madsen, O., Mann, K., Matthews, L., McLaren, S., Morozumi, T., Murtaugh, M. P., Narayan, J., Nguyen, D. T., Ni, P., Oh, S. J., Onteru, S., Panitz, F., Park, E. W., Park, H. S., Pascal, G., Paudel, Y., Perez-Enciso, M., Ramirez-Gonzalez, R., Reecy, J. M., Rodriguez-Zas, S., Rohrer, G. A., Rund, L., Sang, Y., Schachtschneider, K., Schraiber, J. G., Schwartz, J., Scobie, L., Scott, C., Searle, S., Servin, B., Southey, B. R., Sperber, G., Stadler, P., Sweedler, J. V., Tafer, H., Thomsen, B., Wali, R., Wang, J., Wang, J., White, S., Xu, X., Yerle, M., Zhang, G., Zhang, J., Zhang, J., Zhao, S., Rogers, J., Churcher, C. & Schook, L. B., Nov 15 2012, In : Nature. 491, 7424, p. 393-398 6 p.

Research output: Contribution to journalArticle

Sus scrofa
Swine
Demography
Genome
Smell

Analysis of active nucleolus organizing regions in polyploid prairie cordgrass (Spartina pectinata Link) by silver staining

Kim, S., Lee, D. K. & Rayburn, A. L., Jan 1 2015, In : Cytologia. 80, 2, p. 249-258 10 p.

Research output: Contribution to journalArticle

Spartina pectinata
Silver Staining
Polyploidy
Ploidies
cell nucleolus

Analysis of a horizontally transferred pathway involved in vitamin B 6 biosynthesis from the soybean cyst nematode Heterodera glycines

Craig, J. P., Bekal, S., Hudson, M., Domier, L., Niblack, T. & Lambert, K. N., Oct 1 2008, In : Molecular biology and evolution. 25, 10, p. 2085-2098 14 p.

Research output: Contribution to journalArticle

Horizontal Gene Transfer
Heterodera glycines
Vitamin B 6
pyridoxine
cyst

Analysis of Alternative Splicing Landscape in Pineapple (Ananas comosus)

Wai, C. M., Powell, B., Ming, R. R. & Min, X. J., Sep 1 2016, In : Tropical Plant Biology. 9, 3, p. 150-160 11 p.

Research output: Contribution to journalArticle

Ananas
Ananas comosus
alternative splicing
Alternative Splicing
pineapples

Analysis of a quantitative trait locus allele from wild soybean that increases seed protein concentration in soybean

Sebolt, A. M., Shoemaker, R. C. & Diers, B. W., Oct 26 2000, In : Crop Science. 40, 5, p. 1438-1444 7 p.

Research output: Contribution to journalArticle

Glycine soja
quantitative trait loci
soybeans
alleles
seeds

Analysis of economic and social costs of growing Petunia × Hybrida in a greenhouse production system using alternative containers

Brumfield, R. G., Kenny, L. B., Devincentis, A. J., Koeser, A. K., Verlinden, S., Both, A. J., Bi, G., Lovell, S. T. & Stewart, J. R., Aug 2018, In : HortScience. 53, 8, p. 1179-1185 7 p.

Research output: Contribution to journalArticle

Petunia hybrida
greenhouse production
economic analysis
containers
production technology

Analysis of expressed sequence tags and alternative splicing genes in sacred lotus (Nelumbo nucifera Gaertn.)

VanBuren, R., Walters, B., Ming, R. R. & Min, X. J., Sep 24 2013, In : Plant OMICS. 6, 4, p. 311-317 7 p.

Research output: Contribution to journalArticle

Nelumbo nucifera
Lotus
alternative splicing
expressed sequence tags
genes

Analysis of gene expression during Brassica seed germination using a cross-species microarray platform

Hudson, M. E., Bruggink, T., Chang, S. H., Yu, W., Han, B., Wang, X., Van Der Toorn, P. & Zhu, T., Jul 1 2007, In : Crop Science. 47, SUPPL. 2, p. S-96-S-112

Research output: Contribution to journalArticle

Brassica
seed germination
gene expression
hybridization
Arabidopsis

Analysis of genetic diversity of lychee (Litchi chinensis Sonn.) and wild forest relatives in the Sapindaceae from Vietnam using microsatellites

Tran, H., Kanzaki, S., Triest, L., Hormaza, I., Kuk, N. J., Ming, R., Bousquet, J., Khasa, D. & Van Damme, P., Dec 1 2019, In : Genetic Resources and Crop Evolution. 66, 8, p. 1653-1669 17 p.

Research output: Contribution to journalArticle

Sapindaceae
Litchi
Litchi chinensis
Vietnam
Microsatellite Repeats

Analysis of l-alanine:2-oxoglutarate aminotransferase isozymes in maize

Watson, N. R., Peschke, V. M., Russell, D. A. & Sachs, M. M., Aug 1 1992, In : Biochemical Genetics. 30, 7-8, p. 371-383 13 p.

Research output: Contribution to journalArticle

transaminases
Alanine Transaminase
alanine
Isoenzymes
Zea mays
Comet Assay
Mutagens
Cricetulus
Ovary
Flow Cytometry

Analysis of nucleotide sequence data using mixed model methodology

Rodriguez-Zas, S. L. & Southey, B. R., Oct 23 2001, In : Genetic Epidemiology. 21, SUPPL. 1, p. S638-S642

Research output: Contribution to journalArticle

Founder Effect
Survival Analysis
Age of Onset
Genes

Analysis of papaya BAC end sequences reveals first insights into the organization of a fruit tree genome

Lai, C. W. J., Yu, Q., Hou, S., Skelton, R. L., Jones, M. R., Lewis, K. L. T., Murray, J., Eustice, M., Guan, P., Agbayani, R., Moore, P. H., Ming, R. R. & Presting, G. G., Jul 1 2006, In : Molecular Genetics and Genomics. 276, 1, p. 1-12 12 p.

Research output: Contribution to journalArticle

Carica
Fruit
Genome
Arabidopsis
Populus

Analysis of soybean protein-derived peptides and the effect of cultivar, environmental conditions, and processing on lunasin concentration in soybean and soy products

Wang, W., Dia, V. P., Vasconez, M., De Mejia, E. G. & Nelson, R. L., Jul 1 2008, In : Journal of AOAC International. 91, 4, p. 936-946 11 p.

Research output: Contribution to journalArticle

soybean products
Soybean Proteins
soy protein
Soybeans
peptide

Analysis of spontaneous frameshift mutations in REV1 and rev1-1 strains of Saccharomyces cerevisiae

Kalinowski, D. P., Larimer, F. W. & Plewa, M. J., Sep 1995, In : Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis. 331, 1, p. 149-159 11 p.

Research output: Contribution to journalArticle

Frameshift Mutation
Saccharomyces cerevisiae
Polymerase Chain Reaction
Mutation
Plasmids

Analysis of the dynamics of adaptation to transgenic corn and crop rotation by western corn rootworm (Coleoptera: Chrysomelidae) using a daily time-step model

Crowder, D. W., Onstad, D. W., Gray, M. E., Pierce, C. M. F., Hager, A. G., Ratcliffe, S. T. & Steffey, K. L., Apr 2005, In : Journal of economic entomology. 98, 2, p. 534-551 18 p.

Research output: Contribution to journalArticle

Diabrotica virgifera virgifera
crop rotation
Chrysomelidae
maize
genetically modified organisms

Analysis of the genotoxicity of municipal sewage sludge extracts with sister chromatid exchange in cultured human lymphocytes

Engl, S., Plewa, M. J. & Hopke, P. K., Nov 1 1988, In : Water, Air, and Soil Pollution. 42, 1-2, p. 117-128 12 p.

Research output: Contribution to journalArticle

Lymphocytes
genotoxicity
Sewage sludge
Cells
Chromosomes

Analysis of the genotoxicity of municipal solid waste incinerator ash

Silkowski, M. A., Smith, S. R. & Plewa, M. J., Jan 15 1992, In : Science of the Total Environment, The. 111, 2-3, p. 109-124 16 p.

Research output: Contribution to journalArticle

Ashes
Refuse incinerators
Municipal solid waste
genotoxicity
municipal solid waste
agricultural management
drainage water
Phosphorus
Nutrients
Drainage

Analysis of xylem exudate by ion chromatography: Influence of nitrogen and residue management on corn exudate composition

Teyker, R. H., Galerani, P. R. & Nafziger, E. D., May 1 1991, In : Communications in Soil Science and Plant Analysis. 22, 7-8, p. 785-793 9 p.

Research output: Contribution to journalArticle

ion chromatography
ion exchange chromatography
xylem
maize
ionic composition

Analytical workflow profiling gene expression in murine macrophages

Nixon, S. E., Gonzalez-Peña, D., Lawson, M. A., McCusker, R. H., Hernandez, A. G., O'Connor, J. C., Dantzer, R., Kelley, K. W. & Rodriguez-Zas, S. L., Apr 25 2015, In : Journal of Bioinformatics and Computational Biology. 13, 2, 1550010.

Research output: Contribution to journalArticle

Workflow
Macrophages
Gene Expression Profiling
Gene expression
RNA