Research Output

2018

High-density linkage mapping of vitamin E content in maize grain

Fenton, M. E., Owens, B. F., Lipka, A. E., Ortiz, D., Tiede, T., Mateos-Hernandez, M., Ferruzzi, M. G. & Rocheford, T., Mar 1 2018, In : Molecular Breeding. 38, 3, 31.

Research output: Contribution to journalArticle

High-fidelity detection of crop biomass quantitative trait loci from low-cost imaging in the field

Banan, D., Paul, R. E., Feldman, M. J., Holmes, M. W., Schlake, H., Baxter, I., Jiang, H. & Leakey, A. D. B., Feb 1 2018, In : Plant Direct. 2, 2, e00041.

Research output: Contribution to journalArticle

Open Access

High-throughput, microscale protocol for the analysis of processing parameters and nutritional qualities in Maize (Zea mays L.)

Butts-Wilmsmeyer, C., Yana, N. A., Kandhola, G., Rausch, K. D., Mumm, R. H. & Bohn, M. O., Jun 18 2018, In : Journal of Visualized Experiments. 2018, 136, e57809.

Research output: Contribution to journalArticle

Hybrid selection and agronomic management to lessen the continuous corn yield penalty

Vogel, A. M. & Below, F. E., Oct 16 2018, In : Agronomy. 8, 10, 228.

Research output: Contribution to journalArticle

Identification of missing variants by combining multiple analytic pipelines

Ren, Y., Reddy, J. S., Pottier, C., Sarangi, V., Tian, S., Sinnwell, J. P., McDonnell, S. K., Biernacka, J. M., Carrasquillo, M. M., Ross, O. A., Ertekin-Taner, N., Rademakers, R., Hudson, M., Mainzer, L. S. & Asmann, Y. W., Apr 16 2018, In : BMC bioinformatics. 19, 1, 139.

Research output: Contribution to journalArticle

Identification of quantitative trait loci for goss’s wilt of maize

Cooper, J. S., Balint-Kurti, P. J. & Jamann, T. M., May 1 2018, In : Crop Science. 58, 3, p. 1192-1200 9 p.

Research output: Contribution to journalArticle

Identifying barriers and motivators for adoption of multifunctional perennial cropping systems by landowners in the Upper Sangamon River Watershed, Illinois

Mattia, C. M., Lovell, S. T. & Davis, A., Oct 1 2018, In : Agroforestry Systems. 92, 5, p. 1155-1169 15 p.

Research output: Contribution to journalArticle

Identifying marginal land for Multifunctional Perennial Cropping Systems in the Upper Sangamon River watershed, Illinois

Mattia, C., Lovell, S. T. & Fraterrigo, J., Nov 1 2018, In : Journal of Soil and Water Conservation. 73, 6, p. 669-681 13 p.

Research output: Contribution to journalArticle

Immobility in the sedentary plant-parasitic nematode H. glycines is associated with remodeling of neuromuscular tissue

Han, Z., Thapa, S., Reuter-Carlson, U., Reed, H., Gates, M., Lambert, K. N. & Schroeder, N. E., Aug 2018, In : PLoS pathogens. 14, 8, e1007198.

Research output: Contribution to journalArticle

Increasing drought and diminishing benefits of elevated carbon dioxide for soybean yields across the US Midwest

Jin, Z., Ainsworth, E. A., Leakey, A. D. B. & Lobell, D. B., Feb 1 2018, In : Global change biology. 24, 2, p. e522-e533

Research output: Contribution to journalArticle

Increasing yield stability and input efficiencies with cost-effective mechanization in Nepal

Park, A. G., McDonald, A. J., Devkota, M. & Davis, A. S., Nov 1 2018, In : Field Crops Research. 228, p. 93-101 9 p.

Research output: Contribution to journalArticle

Inpactor, integrated and parallel analyzer and classifier of LTR retrotransposons and ITS application for pineapple LTR retrotransposons diversity and dynamics

Orozco-Arias, S., Liu, J., Tabares-Soto, R., Ceballos, D., Domingues, D. S., Garavito, A., Ming, R. & Guyot, R., 2018, In : Biology. 7, 2, 32.

Research output: Contribution to journalArticle

Integration of multiple stimuli-sensing systems to regulate HrpS and type III secretion system in Erwinia amylovora

Lee, J. H. & Zhao, Y., Feb 1 2018, In : Molecular Genetics and Genomics. 293, 1, p. 187-196 10 p.

Research output: Contribution to journalArticle

Integration of sudden death syndrome resistance loci in the soybean genome

Chang, H. X., Roth, M. G., Wang, D., Cianzio, S. R., Lightfoot, D. A., Hartman, G. L. & Chilvers, M. I., Apr 1 2018, In : Theoretical and Applied Genetics. 131, 4, p. 757-773 17 p.

Research output: Contribution to journalReview article

Interplay Between Amphetamine and Activity Level in Gene Networks of the Mouse Striatum

Goncalves, T. M., Southey, B. R. & Rodriguez-Zas, S. L., Dec 1 2018, In : Bioinformatics and Biology Insights. 12

Research output: Contribution to journalArticle

Invasion complexity at large spatial scales is an emergent property of interactions among landscape characteristics and invader traits

Muthukrishnan, R., Davis, A. S., Jordan, N. R. & Forester, J. D., May 2018, In : PloS one. 13, 5, e0195892.

Research output: Contribution to journalArticle

Long-term crop rotation and tillage effects on soil greenhouse gas emissions and crop production in Illinois, USA

Behnke, G. D., Zuber, S. M., Pittelkow, C. M., Nafziger, E. D. & Villamil, M. B., Jul 1 2018, In : Agriculture, Ecosystems and Environment. 261, p. 62-70 9 p.

Research output: Contribution to journalArticle

Loss-of-function mutations in the dpp and opp permeases render erwinia amylovora resistant to kasugamycin and blasticidin S

Ge, Y., Lee, J. H., Hu, B. & Zhao, Y., Aug 2018, In : Molecular Plant-Microbe Interactions. 31, 8, p. 823-832 10 p.

Research output: Contribution to journalArticle

Maize Genomes to Fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets

Alkhalifah, N., Campbell, D. A., Falcon, C. M., Gardiner, J. M., Miller, N. D., Romay, M. C., Walls, R., Walton, R., Yeh, C. T., Bohn, M., Bubert, J., Buckler, E. S., Ciampitti, I., Flint-Garcia, S., Gore, M. A., Graham, C., Hirsch, C., Holland, J. B., Hooker, D., Kaeppler, S. & 24 others, Knoll, J., Lauter, N., Lee, E. C., Lorenz, A., Lynch, J. P., Moose, S. P., Murray, S. C., Nelson, R., Rocheford, T., Rodriguez, O., Schnable, J. C., Scully, B., Smith, M., Springer, N., Thomison, P., Tuinstra, M., Wisser, R. J., Xu, W., Ertl, D., Schnable, P. S., De Leon, N., Spalding, E. P., Edwards, J. & Lawrence-Dill, C. J., Jul 9 2018, In : BMC Research Notes. 11, 1, 452.

Research output: Contribution to journalArticle

Mapping of new quantitative trait loci for sudden death syndrome and soybean cyst nematode resistance in two soybean populations

Swaminathan, S., Abeysekara, N. S., Knight, J. M., Liu, M., Dong, J., Hudson, M. E., Bhattacharyya, M. K. & Cianzio, S. R., May 1 2018, In : Theoretical and Applied Genetics. 131, 5, p. 1047-1062 16 p.

Research output: Contribution to journalArticle

Metabolic pathway of topramezone in multiple-resistant waterhemp (Amaranthus tuberculatus) differs from naturally tolerant maize

Lygin, A. V., Kaundun, S. S., Morris, J. A., Mcindoe, E., Hamilton, A. R. & Riechers, D. E., 2018, In : Frontiers in Plant Science. 871, 1644.

Research output: Contribution to journalArticle

Metabolism of 2,4-dichlorophenoxyacetic acid contributes to resistance in a common waterhemp (Amaranthus tuberculatus) population

Figueiredo, M. R. A., Leibhart, L. J., Reicher, Z. J., Tranel, P. J., Nissen, S. J., Westra, P., Bernards, M. L., Kruger, G. R., Gaines, T. A. & Jugulam, M., Oct 2018, In : Pest Management Science. 74, 10, p. 2356-2362 7 p.

Research output: Contribution to journalArticle

Methodological recommendations for optimizing assays of enzyme activities in soil samples

Margenot, A. J., Nakayama, Y. & Parikh, S. J., Oct 2018, In : Soil Biology and Biochemistry. 125, p. 350-360 11 p.

Research output: Contribution to journalArticle

Mosquito microbiota cluster by host sampling location

Muturi, E. J., Lagos-Kutz, D., Dunlap, C., Ramirez, J. L., Rooney, A. P., Hartman, G. L., Fields, C. J., Rendon, G. & Kim, C. H., Aug 14 2018, In : Parasites and Vectors. 11, 1, 468.

Research output: Contribution to journalArticle

New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Hu, W., Hua, X., Zhang, Q., Wang, J., Shen, Q., Zhang, X., Wang, K., Yu, Q., Lin, Y. R., Ming, R. & Zhang, J., Nov 7 2018, In : BMC Plant Biology. 18, 1, 270.

Research output: Contribution to journalArticle

Nitrogen use efficiency and the genetic variation of maize expired plant variety protection germplasm

Mastrodomenico, A. T., Hendrix, C. C. & Below, F. E., Jan 2018, In : Agriculture (Switzerland). 8, 1, 3.

Research output: Contribution to journalArticle

Optimizing photorespiration for improved crop productivity

South, P. F., Cavanagh, A. P., Lopez-Calcagno, P. E., Raines, C. A. & Ort, D. R., Dec 2018, In : Journal of Integrative Plant Biology. 60, 12, p. 1217-1230 14 p.

Research output: Contribution to journalReview article

Optimizing RNA-seq studies to investigate herbicide resistance

Giacomini, D. A., Gaines, T., Beffa, R. & Tranel, P. J., Oct 2018, In : Pest Management Science. 74, 10, p. 2260-2264 5 p.

Research output: Contribution to journalReview article

Order and polarity in character state transformation models that root the tree of life

Caetano-Anollés, K., Caetano-Anollés, D., Nasir, A., Kim, K. M. & Caetano-Anollés, G., Jun 2018, In : Biochimie. 149, p. 135-136 2 p.

Research output: Contribution to journalArticle

Origins and structure of chloroplastic and mitochondrial plant protoporphyrinogen oxidases: implications for the evolution of herbicide resistance

Dayan, F. E., Barker, A. & Tranel, P. J., Oct 2018, In : Pest Management Science. 74, 10, p. 2226-2234 9 p.

Research output: Contribution to journalReview article

Ozone effects on crops and consideration in crop models

Emberson, L. D., Pleijel, H., Ainsworth, E. A., van den Berg, M., Ren, W., Osborne, S., Mills, G., Pandey, D., Dentener, F., Büker, P., Ewert, F., Koeble, R. & Van Dingenen, R., Oct 2018, In : European Journal of Agronomy. 100, p. 19-34 16 p.

Research output: Contribution to journalArticle

Ozone pollution will compromise efforts to increase global wheat production

Mills, G., Sharps, K., Simpson, D., Pleijel, H., Broberg, M., Uddling, J., Jaramillo, F., Davies, W. J., Dentener, F., Van den Berg, M., Agrawal, M., Agrawal, SB., Ainsworth, E. A., Büker, P., Emberson, L., Feng, Z., Harmens, H., Hayes, F., Kobayashi, K., Paoletti, E. & 1 others, Van Dingenen, R., Aug 2018, In : Global change biology. 24, 8, p. 3560-3574 15 p.

Research output: Contribution to journalArticle

Papain-like cysteine proteases in Carica papaya: Lineage-specific gene duplication and expansion

Liu, J., Sharma, A., Niewiara, M. J., Singh, R., Ming, R. & Yu, Q., Jan 6 2018, In : BMC genomics. 19, 1, 26.

Research output: Contribution to journalArticle

PGD: Pineapple Genomics Database

Xu, H., Yu, Q., Shi, Y., Hua, X., Tang, H., Yang, L., Ming, R. & Zhang, J., Dec 1 2018, In : Horticulture Research. 5, 1, 66.

Research output: Contribution to journalArticle

Phloem function: a key to understanding and manipulating plant responses to rising atmospheric [CO2]?

Ainsworth, E. A. & Lemonnier, P., Jun 2018, In : Current opinion in plant biology. 43, p. 50-56 7 p.

Research output: Contribution to journalReview article

Photosystem II Subunit S overexpression increases the efficiency of water use in a field-grown crop

Głowacka, K., Kromdijk, J., Kucera, K., Xie, J., Cavanagh, A. P., Leonelli, L., Leakey, A. D. B., Ort, D. R., Niyogi, K. K. & Long, S. P., Dec 1 2018, In : Nature communications. 9, 1, 868.

Research output: Contribution to journalArticle

Plastic carrier polishing chamber reduces pollution swapping from denitrifying woodchip bioreactors

Christianson, L. E., Feyereisen, G., Lepine, C. & Summerfelt, S. T., May 2018, In : Aquacultural Engineering. 81, p. 33-37 5 p.

Research output: Contribution to journalArticle

Population and community structure shifts of ammonia oxidizers after four-year successive biochar application to agricultural acidic and alkaline soils

He, L., Bi, Y., Zhao, J., Pittelkow, C. M., Zhao, X., Wang, S. & Xing, G., Apr 1 2018, In : Science of the Total Environment. 619-620, p. 1105-1115 11 p.

Research output: Contribution to journalArticle

Postembryonic ventral nerve cord development and gonad migration in steinernema carpocapsae

Bui, H. X. & Schroeder, N. E., 2018, In : Journal of Nematology. 50, 1, p. 27-32 6 p.

Research output: Contribution to journalArticle

Potential nitrogen losses in relation to spatially distinct soil management history and biochar addition

Baechle, B., Davis, A. S. & Pittelkow, C. M., Jan 1 2018, In : Journal of Environmental Quality. 47, 1, p. 62-69 8 p.

Research output: Contribution to journalArticle

Priorities for wheat intensification in the Eastern Indo-Gangetic Plains

Park, A., Davis, A. & McDonald, A., Jun 2018, In : Global Food Security. 17, p. 1-8 8 p.

Research output: Contribution to journalReview article

QTL mapping and epistatic interaction analysis of field resistance to sudden death syndrome (Fusarium virguliforme) in soybean

Tan, R., Serven, B., Collins, P. J., Zhang, Z., Wen, Z., Boyse, J. F., Gu, C., Chilvers, M. I., Diers, B. W. & Wang, D., Aug 1 2018, In : Theoretical and Applied Genetics. 131, 8, p. 1729-1740 12 p.

Research output: Contribution to journalArticle

Quantitative trait loci mapping of western corn rootworm (coleoptera: Chrysomelidae) host plant resistance in two populations of doubled haploid lines in maize (Zea mays L.)

Bohn, M. O., Marroquin, J. J., Flint-Garcia, S., Dashiell, K., Willmot, D. B. & Hibbard, B. E., Jan 1 2018, In : Journal of economic entomology. 111, 1, p. 435-444 10 p.

Research output: Contribution to journalArticle