Research Output

2017

Enhancing soybean photosynthetic CO2 assimilation using a cyanobacterial membrane protein, ictB

Hay, W. T., Bihmidine, S., Mutlu, N., Hoang, K. L., Awada, T., Weeks, D. P., Clemente, T. E. & Long, S. P., May 1 2017, In : Journal of Plant Physiology. 212, p. 58-68 11 p.

Research output: Contribution to journalArticle

Environmental indicators reflective of road design in a forested landscape

Neher, D. A., Williams, K. M. & Lovell, S. T., Mar 2017, In : Ecosphere. 8, 3, e01734.

Research output: Contribution to journalArticle

Erwinia amylovora in the genomics era: From genomes to pathogen virulence, regulation, and disease control strategies

Smits, T. H. M., Duffy, B., Sundin, G. W., Zhao, Y. F. & Rezzonico, F., 2017, In : Journal of Plant Pathology. 99, Special Issue, p. 7-23 17 p.

Research output: Contribution to journalArticle

Evaluating the Development of Biocatalytic Technology for the Targeted Removal of Perchlorate from Drinking Water

Hutchison, J. M., Guest, J. S. & Zilles, J. L., Jun 20 2017, In : Environmental Science and Technology. 51, 12, p. 7178-7186 9 p.

Research output: Contribution to journalArticle

Evaluation of DeNitrification DeComposition model for estimating ammonia fluxes from chemical fertilizer application

Balasubramanian, S., Nelson, A., Koloutsou-Vakakis, S., Lin, J., Rood, M. J., Myles, L. T. & Bernacchi, C., May 1 2017, In : Agricultural and Forest Meteorology. 237-238, p. 123-134 12 p.

Research output: Contribution to journalArticle

Evaluation of the quantity and composition of sugars and lipid in the juice and bagasse of lipid producing sugarcane

Huang, H., Moreau, R. A., Powell, M. J., Wang, Z., Kannan, B., Altpeter, F., Grennan, A. K., Long, S. P. & Singh, V., Apr 1 2017, In : Biocatalysis and Agricultural Biotechnology. 10, p. 148-155 8 p.

Research output: Contribution to journalArticle

Evolution and expression of the fructokinase gene family in Saccharum

Chen, Y., Zhang, Q., Hu, W., Zhang, X., Wang, L., Hua, X., Yu, Q., Ming, R. & Zhang, J., Feb 21 2017, In : BMC genomics. 18, 1, 197.

Research output: Contribution to journalArticle

Exploring linear and cyclic (DI)-nucleotides as messengers for regulation of T3SS and biofilm formation in erwinia amylovora

Zhao, Y. F. & Sundin, G. W., 2017, In : Journal of Plant Pathology. 99, Special Issue, p. 25-35 11 p.

Research output: Contribution to journalShort survey

Expression of cyanobacterial FBP/SBPase in soybean prevents yield depression under future climate conditions

Köhler, I. H., Ruiz-Vera, U. M., VanLoocke, A., Thomey, M. L., Clemente, T., Long, S. P., Ort, D. R. & Bernacchi, C. J., 2017, In : Journal of experimental botany. 68, 3, p. 715-726 12 p.

Research output: Contribution to journalArticle

Fine mapping of the SCN resistance QTL cqSCN-006 and cqSCN-007 from Glycine soja PI 468916

Yu, N. & Diers, B. W., Feb 1 2017, In : Euphytica. 213, 2, 54.

Research output: Contribution to journalArticle

First report of Phakopsora pachyrhizi causing rust on Soybean in Ethiopia

Tesfay, A., Kifle, B., Haudenshield, J. S. & Hartman, G. L., Jun 2017, In : Plant disease. 101, 6, 1 p.

Research output: Contribution to journalArticle

First-season crop yield response to organic soil amendments: A meta-analysis

Wortman, S. E., Holmes, A. A., Miernicki, E., Knoche, K. & Pittelkow, C. M., Jan 1 2017, In : Agronomy Journal. 109, 4, p. 1210-1217 8 p.

Research output: Contribution to journalReview article

Frequency of Gly-210 Deletion Mutation among Protoporphyrinogen Oxidase Inhibitor-Resistant Palmer Amaranth (Amaranthus palmeri) Populations

Salas-Perez, R. A., Burgos, N. R., Rangani, G., Singh, S., Refatti, J. P., Piveta, L., Tranel, P. J., Mauromoustakos, A. & Scott, R. C., Nov 2017, In : Weed Science. 65, 6, p. 718-731 14 p.

Research output: Contribution to journalArticle

Gametophytic self-incompatibility is operative in Miscanthus sinensis (poaceae) and is affected by pistil age

Jiang, J., Guan, Y., McCormick, S., Juvik, J., Lubberstedt, T. & Fei, S. Z., Jan 1 2017, In : Crop Science. 57, 4, p. 1948-1956 9 p.

Research output: Contribution to journalArticle

Genetic characterization of the soybean nested association mapping population

Song, Q. J., Yan, L., Quigley, C., Jordan, B. D., Fickus, E., Schroeder, S., Song, B. H., An, Y. Q. C., Hyten, D., Nelson, R., Rainey, K., Beavis, W. D., Specht, J., Diers, B. & Cregan, P., Jan 1 2017, In : Plant Genome. 10, 2

Research output: Contribution to journalArticle

Genetic diversity of Miscanthus sinensis in US naturalized populations

Zhao, Y., Basak, S., Fleener, C. E., Egnin, M., Sacks, E. J., Prakash, C. S. & He, G., May 1 2017, In : GCB Bioenergy. 9, 5, p. 965-972 8 p.

Research output: Contribution to journalArticle

Genetics and Partitioning for Biomass of Prairie Cordgrass Compared to Switchgrass on Marginal Cropland

Boe, A., Johnson, P. J., Owens, V., Lee, D. K., Guo, J. & Gonzalez-Hernandez, J. L., Sep 1 2017, In : Bioenergy Research. 10, 3, p. 864-875 12 p.

Research output: Contribution to journalArticle

Genome-wide association mapping of crown rust resistance in oat elite germplasm

Esvelt Klos, K., Yimer, B. A., Babiker, E. M., Beattie, A. D., Bonman, J. M., Carson, M. L., Chong, J., Harrison, S. A., Ibrahim, A. M. H., Kolb, F. L., McCartney, C. A., McMullen, M., Mitchell Fetch, J., Mohammadi, M., Murphy, J. P. & Tinker, N. A., Jan 1 2017, In : Plant Genome. 10, 2

Research output: Contribution to journalArticle

Genome-wide association mapping of qualitatively inherited traits in a germplasm collection

Bandillo, N. B., Lorenz, A. J., Graef, G. L., Jarquin, D., Hyten, D. L., Nelson, R. L. & Specht, J. E., Jan 1 2017, In : Plant Genome. 10, 2

Research output: Contribution to journalArticle

Genome-wide association mapping of resistance to a Brazilian isolate of Sclerotinia sclerotiorum in soybean genotypes mostly from Brazil

Wei, W., Mesquita, A. C. O., Figueiró, A. D. A., Wu, X., Manjunatha, S., Wickland, D. P., Hudson, M. E., Juliatti, F. C. & Clough, S. J., Nov 7 2017, In : BMC genomics. 18, 1, 849.

Research output: Contribution to journalArticle

Genotype × environment interaction analysis of North American shrub willow yield trials confirms superior performance of triploid hybrids

Fabio, E. S., Volk, T. A., Miller, R. O., Serapiglia, M. J., Gauch, H. G., Van Rees, K. C. J., Hangs, R. D., Amichev, B. Y., Kuzovkina, Y. A., Labrecque, M., Johnson, G. A., Ewy, R. G., Kling, G. J. & Smart, L. B., Feb 1 2017, In : GCB Bioenergy. 9, 2, p. 445-459 15 p.

Research output: Contribution to journalArticle

Genotype by environment effects on promiscuous nodulation in soybean (Glycine max L. Merrill)

Agoyi, E. E., Odong, T. L., Tumuhairwe, J. B., Chigeza, G., Diers, B. W. & Tukamuhabwa, P., Mar 17 2017, In : Agriculture and Food Security. 6, 1, 29.

Research output: Contribution to journalArticle

Gibberellins promote brassinosteroids action and both increase heterosis for plant height in Maize (Zea mays L.)

Hu, S., Wang, C., Sanchez, D. L., Lipka, A. E., Liu, P., Yin, Y., Blanco, M. & Lübberstedt, T., Jun 20 2017, In : Frontiers in Plant Science. 8, 1039.

Research output: Contribution to journalArticle

Glyphosate-resistant waterhemp (Amaranthus tuberculatus var. rudis) in Ontario, Canada

Schryver, M. G., Soltani, N., Hooker, D. C., Robinson, D. E., Tranel, P. J. & Sikkema, P. H., May 9 2017, In : Canadian Journal of Plant Science. 97, 6, p. 1057-1067 11 p.

Research output: Contribution to journalArticle

Growth and development of two perennial grasses in ambient light conditions during their natural dormant period

Guo, J., Boe, A., Kim, D. S. & Lee, D. K., Jan 1 2017, In : Crop Science. 57, 4, p. 2213-2225 13 p.

Research output: Contribution to journalArticle

Herbicide-resistance mechanisms: gene amplification is not just for glyphosate

Tranel, P. J., Nov 2017, In : Pest Management Science. 73, 11, p. 2225-2226 2 p.

Research output: Contribution to journalComment/debate

High-throughput phenotyping of maize leaf physiological and biochemical traits using hyperspectral reflectance

Yendrek, C. R., Tomaz, T., Montes, C. M., Cao, Y., Morse, A. M., Brown, P. J., McIntyre, L. M., Leakey, A. D. B. & Ainsworth, E. A., Jan 2017, In : Plant physiology. 173, 1, p. 614-626 13 p.

Research output: Contribution to journalArticle

High-Throughput resequencing of maize landraces at genomic regions associated with flowering time

Jamann, T. M., Sood, S., Wisser, R. J. & Holland, J. B., Jan 2017, In : PloS one. 12, 1, e0168910.

Research output: Contribution to journalArticle

Identification and Characterization of microRNAs from Saccharum officinarum L by Deep Sequencing

Xue, A., Li, Z., Cai, M., Zhang, Q., Zhang, X., Ming, R. & Zhang, J., Sep 1 2017, In : Tropical Plant Biology. 10, 2-3, p. 134-150 17 p.

Research output: Contribution to journalArticle

Identification and Comparative Mammalian Cell Cytotoxicity of New Iodo-Phenolic Disinfection Byproducts in Chloraminated Oil and Gas Wastewaters

Liberatore, H. K., Plewa, M. J., Wagner, E. D., Vanbriesen, J. M., Burnett, D. B., Cizmas, L. H. & Richardson, S. D., Nov 14 2017, In : Environmental Science and Technology Letters. 4, 11, p. 475-480 6 p.

Research output: Contribution to journalArticle

Identification of capsid/coat related protein folds and their utility for virus classification

Nasir, A. & Caetano-Anollés, G., Mar 10 2017, In : Frontiers in Microbiology. 8, MAR, 380.

Research output: Contribution to journalArticle

Identification of large variation in the photosynthetic induction response among 37 soybean [Glycine max (L.) Merr.] genotypes that is not correlated with steady-state photosynthetic capacity

Soleh, M. A., Tanaka, Y., Kim, S. Y., Huber, S. C., Sakoda, K. & Shiraiwa, T., Mar 1 2017, In : Photosynthesis research. 131, 3, p. 305-315 11 p.

Research output: Contribution to journalArticle

Impact of seed protein alleles from three soybean sources on seed composition and agronomic traits

Brzostowski, L. F., Pruski, T. I., Specht, J. E. & Diers, B. W., Nov 1 2017, In : Theoretical and Applied Genetics. 130, 11, p. 2315-2326 12 p.

Research output: Contribution to journalArticle

Impact of soybean cyst nematode resistance on soybean yield

Rincker, K., Cary, T. & Diers, B. W., Jan 1 2017, In : Crop Science. 57, 3, p. 1373-1382 10 p.

Research output: Contribution to journalArticle

Importance of biophysical effects on climate warming mitigation potential of biofuel crops over the conterminous United States

Zhu, P., Zhuang, Q., Eva, J. & Bernacchi, C., Mar 1 2017, In : GCB Bioenergy. 9, 3, p. 577-590 14 p.

Research output: Contribution to journalArticle

Influence of 1-Methylcyclopropene Treatment on Postharvest Quality of Four Scab (Venturia inaequalis)-Resistant Apple Cultivars

Zucoloto, M., Ku, K. M., Kim, M. J. & Kushad, M. M., Jan 1 2017, In : Journal of Food Quality. 2017, 5951041.

Research output: Contribution to journalArticle

Investigation of nuclear enzyme topoisomerase as a putative molecular target of monohaloacetonitrile disinfection by-products

Komaki, Y. & Plewa, M. J., Aug 2017, In : Journal of Environmental Sciences. 58, p. 231-238 8 p.

Research output: Contribution to journalArticle

Isolation of ripening-related genes from ethylene/1-MCP treated papaya through RNA-seq

Shen, Y. H., Lu, B. G., Feng, L., Yang, F. Y., Geng, J. J., Ming, R. & Chen, X. J., Aug 31 2017, In : BMC genomics. 18, 1, 671.

Research output: Contribution to journalArticle

Leaf and canopy scale drivers of genotypic variation in soybean response to elevated carbon dioxide concentration

Sanz-Sáez, Á., Koester, R. P., Rosenthal, D. M., Montes, C. M., Ort, D. R. & Ainsworth, E. A., Sep 2017, In : Global change biology. 23, 9, p. 3908-3920 13 p.

Research output: Contribution to journalArticle

Livelihoods and production diversity on U.S. permaculture farms

Ferguson, R. S. & Lovell, S. T., Jul 3 2017, In : Agroecology and Sustainable Food Systems. 41, 6, p. 588-613 26 p.

Research output: Contribution to journalArticle

Long-term evolution of viruses: A Janus-faced balance

Nasir, A., Kim, K. M. & Caetano-Anollés, G., Aug 2017, In : BioEssays. 39, 8, 1700026.

Research output: Contribution to journalReview article

Loss of photosynthetic efficiency in the shade. An Achilles heel for the dense modern stands of our most productive C4 crops?

Pignon, C. P., Jaiswal, D., McGrath, J. M. & Long, S. P., 2017, In : Journal of experimental botany. 68, 2, p. 335-345 11 p.

Research output: Contribution to journalArticle

Macroevolutionary synthesis of flowering plant sexual systems

Goldberg, E. E., Otto, S. P., Vamosi, J. C., Mayrose, I., Sabath, N., Ming, R. & Ashman, T. L., Apr 1 2017, In : Evolution. 71, 4, p. 898-912 15 p.

Research output: Contribution to journalArticle

Meiotic pairing as an indicator of genome composition in polyploid prairie cordgrass (Spartina pectinata Link)

Bishop, J. W., Kim, S., Villamil, M. B., Lee, D. K. & Rayburn, A. L., Apr 1 2017, In : Genetica. 145, 2, p. 235-240 6 p.

Research output: Contribution to journalArticle

Meta-analysis constrained by data: Recommendations to improve relevance of nutrient management research

Eagle, A. J., Christianson, L. E., Cook, R. L., Harmel, R. D., Miguez, F. E., Qian, S. S. & Ruiz Diaz, D. A., Nov 1 2017, In : Agronomy Journal. 109, 6, p. 2441-2449 9 p.

Research output: Contribution to journalArticle

Metagenome-wide association study and machine learning prediction of bulk soil microbiome and crop productivity

Chang, H. X., Haudenshield, J. S., Bowen, C. R. & Hartman, G. L., Apr 3 2017, In : Frontiers in Microbiology. 8, APR, 519.

Research output: Contribution to journalArticle

Mimivirus: Leading the way in the discovery of giant viruses of amoebae

Colson, P., La Scola, B., Levasseur, A., Caetano-Anollés, G. & Raoult, D., Mar 13 2017, In : Nature Reviews Microbiology. 15, 4, p. 243-254 12 p.

Research output: Contribution to journalReview article

Molecular characterization of a new soybean-infecting member of the genus Nepovirus identified by high-throughput sequencing

Yasmin, T., Nelson, B. D., Hobbs, H. A., McCoppin, N. K., Lambert, K. N. & Domier, L. L., Apr 1 2017, In : Archives of Virology. 162, 4, p. 1089-1092 4 p.

Research output: Contribution to journalArticle

Molecular constraints on resistance-tolerance trade-offs

Mesa, J. M., Scholes, D. R., Juvik, J. A. & Paige, K. N., Oct 1 2017, In : Ecology. 98, 10, p. 2528-2537 10 p.

Research output: Contribution to journalArticle