Research Output

2021
2020

Acidification in corn monocultures favor fungi, ammonia oxidizing bacteria, and nirK-denitrifier groups

Behnke, G. D., Zabaloy, M. C., Riggins, C. W., Rodríguez-Zas, S., Huang, L. & Villamil, M. B., Jun 10 2020, In : Science of the Total Environment. 720, 137514.

Research output: Contribution to journalArticle

Open Access

A connected half-sib family training population for genomic prediction in barley

Sweeney, D. W., Rutkoski, J., Bergstrom, G. C. & Sorrells, M. E., Jan 1 2020, In : Crop Science. 60, 1, p. 262-281 20 p.

Research output: Contribution to journalArticle

Open Access

A diallel analysis of a maize donor population response to in vivo maternal haploid induction: II. Haploid male fertility

De La Fuente, G. N., Frei, U. K., Trampe, B., Ren, J., Bohn, M., Yana, N., Verzegnazzi, A., Murray, S. C. & Lübberstedt, T., Mar 1 2020, In : Crop Science. 60, 2, p. 873-882 10 p.

Research output: Contribution to journalArticle

Allele specific expression of Dof genes responding to hormones and abiotic stresses in sugarcane

Cai, M., Lin, J., Li, Z., Lin, Z., Ma, Y., Wang, Y. & Ming, R., Jan 1 2020, In : PloS one. 15, 1, e0227716.

Research output: Contribution to journalArticle

Open Access

Analysis of MADS-box genes revealed modified flowering gene network and diurnal expression in pineapple

Zhang, X., Fatima, M., Zhou, P., Ma, Q. & Ming, R., Jan 2 2020, In : BMC genomics. 21, 1, 8.

Research output: Contribution to journalArticle

Open Access

An AMA1/MSP119 Adjuvanted Malaria Transplastomic Plant-Based Vaccine Induces Immune Responses in Test Animals

Milán-Noris, E. M., Monreal-Escalante, E., Rosales-Mendoza, S., Soria-Guerra, R. E., Radwan, O., Juvik, J. A. & Korban, S. S., Oct 1 2020, In : Molecular Biotechnology. 62, 10, p. 534-545 12 p.

Research output: Contribution to journalArticle

A natural colorant system from corn: Flavone-anthocyanin copigmentation for altered hues and improved shelf life

Chatham, L. A., Howard, J. E. & Juvik, J. A., Apr 25 2020, In : Food chemistry. 310, 125734.

Research output: Contribution to journalArticle

An improved 7K SNP array, the C7AIR, provides a wealth of validated SNP markers for rice breeding and genetics studies

Morales, K. Y., Singh, N., Perez, F. A., Ignacio, J. C., Thapa, R., Arbelaez, J. D., Tabien, R. E., Famoso, A., Wang, D. R., Septiningsih, E. M., Shi, Y., Kretzschmar, T., McCouch, S. R. & Thomson, M. J., May 2020, In : PloS one. 15, 5, e0232479.

Research output: Contribution to journalArticle

Open Access

Antagonism of Trichoderma-based biofungicides against Brazilian and North American isolates of Sclerotinia sclerotiorum and growth promotion of soybean

Macena, A. M. F., Kobori, N. N., Mascarin, G. M., Vida, J. B. & Hartman, G. L., Apr 1 2020, In : BioControl. 65, 2, p. 235-246 12 p.

Research output: Contribution to journalArticle

Ants Increase Cloverworm Herbivory Via Nonconsumptive Pathways

Penn, H. J. & Athey, K. J., Jun 1 2020, In : Florida Entomologist. 103, 2, p. 160-167 8 p.

Research output: Contribution to journalArticle

Open Access

A pathogenesis-related protein GmPR08-Bet VI promotes a molecular interaction between the GmSHMT08 and GmSNAP18 in resistance to Heterodera glycines

Lakhssassi, N., Piya, S., Bekal, S., Liu, S., Zhou, Z., Bergounioux, C., Miao, L., Meksem, J., Lakhssassi, A., Jones, K., Kassem, M. A., Benhamed, M., Bendahmane, A., Lambert, K., Boualem, A., Hewezi, T. & Meksem, K., Aug 1 2020, In : Plant Biotechnology Journal. 18, 8, p. 1810-1829 20 p.

Research output: Contribution to journalArticle

Open Access

Aphis glycines virus 1, a new bicistronic virus with two functional internal ribosome entry sites, is related to a group of unclassified viruses in the Picornavirales

Yasmin, T., Thekke-Veetil, T., Hobbs, H. A., Nelson, B. D., McCoppin, N. K., Lagos-Kutz, D., Hartman, G. L., Lambert, K. N., Walker, D. R. & Domier, L. L., 2020, In : Journal of General Virology. 101, 1, p. 105-111 7 p.

Research output: Contribution to journalArticle

Open Access

Arabidopsis plants expressing only the redox-regulated Rca-α isoform have constrained photosynthesis and plant growth

Kim, S. Y., Stessman, D. J., Wright, D. A., Spalding, M. H., Huber, S. C. & Ort, D. R., Sep 1 2020, In : Plant Journal. 103, 6, p. 2250-2262 13 p.

Research output: Contribution to journalArticle

A review and meta-analysis of the agricultural potential of struvite as a phosphorus fertilizer

Hertzberger, A. J., Cusick, R. D. & Margenot, A. J., May 1 2020, In : Soil Science Society of America Journal. 84, 3, p. 653-671 19 p.

Research output: Contribution to journalReview article

Assessing the curative and protective impacts of select fungicides for control of powdery mildew of wheat

Kleczewski, N. M., Butts-Willmsmeyer, C. & Scanlan, C., 2020, In : Plant disease. 104, 4, p. 1195-1200 6 p.

Research output: Contribution to journalArticle

Assessing the sensitivity and repeatability of permanganate oxidizable carbon as a soil health metric: An interlab comparison across soils

Wade, J., Maltais-Landry, G., Lucas, D. E., Bongiorno, G., Bowles, T. M., Calderón, F. J., Culman, S. W., Daughtridge, R., Ernakovich, J. G., Fonte, S. J., Giang, D., Herman, B. L., Guan, L., Jastrow, J. D., Loh, B. H. H., Kelly, C., Mann, M. E., Matamala, R., Miernicki, E. A., Peterson, B. & 12 others, Pulleman, M. M., Scow, K. M., Snapp, S. S., Thomas, V., Tu, X., Wang, D., Jelinski, N. A., Liles, G. C., Barrios-Masias, F. H., Rippner, D. A., Silveira, M. L. & Margenot, A. J., May 1 2020, In : Geoderma. 366, 114235.

Research output: Contribution to journalArticle

Association between metabolic resistances to atrazine and mesotrione in a multiple-resistant waterhemp (Amaranthus tuberculatus) population

Jacobs, K. E., Butts-Wilmsmeyer, C. J., Ma, R., O’brien, S. R. & Riechers, D. E., Apr 28 2020, In : Weed Science. p. 1-9

Research output: Contribution to journalArticle

A wish list for synthetic biology in photosynthesis research

Zhu, X. G., Ort, D. R., Parry, M. A. J. & Von Caemmerer, S., Apr 6 2020, In : Journal of experimental botany. 71, 7, p. 2219-2225 7 p.

Research output: Contribution to journalArticle

Open Access

Bacterial Origin and Reductive Evolution of the CPR Group

Bokhari, R. H., Amirjan, N., Jeong, H., Kim, K. M., Caetano-Anollés, G., Nasir, A. & Bapteste, E., Mar 17 2020, In : Genome biology and evolution. 12, 3, p. 103-121 19 p.

Research output: Contribution to journalArticle

Open Access

Beneficial bacterial volatile compounds for the control of root-knot nematode and bacterial leaf blight on rice

Bui, H. X., Hadi, B. A. R., Oliva, R. & Schroeder, N. E., Sep 2020, In : Crop Protection. 135, 104792.

Research output: Contribution to journalArticle

Bioenergy—The slope of enlightenment

Long, S. P., Jul 1 2020, In : GCB Bioenergy. 12, 7, p. 462-463 2 p.

Research output: Contribution to journalEditorial

Open Access

Biomass Production of Prairie Cordgrass (Spartina pectinata Link.) Using Urea and Kura Clover (Trifolium ambiguum Bieb.) as a Source of Nitrogen

Kim, S. U., Albrecht, K., Sheaffer, C., Lee, D., Subramanian, S. & Owens, V., Jan 1 2020, (Accepted/In press) In : Bioenergy Research.

Research output: Contribution to journalArticle

Open Access

Characterization of genes involved in (p)ppGpp precursor biosynthesis in Erwinia amylovora

Yang, H. W., Yu, M., Liu, J., Khan, A. & Zhao, Y., 2020, (Accepted/In press) In : Journal of Plant Pathology.

Research output: Contribution to journalArticle

Open Access

Civil disobedience movements such as School Strike for the Climate are raising public awareness of the climate change emergency

Thackeray, S. J., Robinson, S. A., Smith, P., Bruno, R., Kirschbaum, M. U. F., Bernacchi, C., Byrne, M., Cheung, W., Cotrufo, M. F., Gienapp, P., Hartley, S., Janssens, I., Hefin Jones, T., Kobayashi, K., Luo, Y., Penuelas, J., Sage, R., Suggett, D. J., Way, D. & Long, S., Mar 1 2020, In : Global change biology. 26, 3, p. 1042-1044 3 p.

Research output: Contribution to journalEditorial

Open Access

Co-expression networks uncover regulation of splicing and transcription markers of disease

Zhang, P., Southey, B. R. & Rodriguez-Zas, S. L., Mar 11 2020, In : EPiC Series in Computing. 70, p. 119-128 10 p.

Research output: Contribution to journalConference article

Open Access

Comparative analysis of chloroplast genomes in Vasconcellea pubescens A.DC. and Carica papaya L

Lin, Z., Zhou, P., Ma, X., Deng, Y., Liao, Z., Li, R. & Ming, R., Dec 1 2020, In : Scientific reports. 10, 1, 15799.

Research output: Contribution to journalArticle

Open Access

Comparative analysis of sucrose phosphate synthase (SPS) gene family between Saccharum officinarum and Saccharum spontaneum

Ma, P., Zhang, X., Chen, L., Zhao, Q., Zhang, Q., Hua, X., Wang, Z., Tang, H., Yu, Q., Zhang, M., Ming, R. & Zhang, J., Sep 14 2020, In : BMC Plant Biology. 20, 1, p. 422

Research output: Contribution to journalArticle

Open Access

Comparative transcriptomic analysis of global gene expression mediated by (p) ppGpp reveals common regulatory networks in Pseudomonas syringae

Liu, J., Yu, M., Chatnaparat, T., Lee, J. H., Tian, Y., Hu, B. & Zhao, Y., Apr 10 2020, In : BMC genomics. 21, 1, 296.

Research output: Contribution to journalArticle

Open Access

Comparative Transcriptomics and Co-Expression Networks Reveal Tissue- and Genotype-Specific Responses of qDTYs to Reproductive-Stage Drought Stress in Rice (Oryza sativa L.)

Tarun, J. A., Mauleon, R., Arbelaez, J. D., Catausan, S., Dixit, S., Kumar, A., Brown, P., Kohli, A. & Kretzschmar, T., Sep 24 2020, In : Genes. 11, 10, 1124.

Research output: Contribution to journalArticle

Open Access

Conserved defense responses between maize and sorghum to Exserohilum turcicum

Zhang, X., Fernandes, S. B., Kaiser, C., Adhikari, P., Brown, P. J., Mideros, S. X. & Jamann, T. M., Feb 10 2020, In : BMC Plant Biology. 20, 1, 67.

Research output: Contribution to journalArticle

Open Access

Construction of high-density genetic maps defined sex determination region of the Y chromosome in spinach

Yu, L., Ma, X., Deng, B., Yue, J. & Ming, R., Sep 21 2020, (Accepted/In press) In : Molecular Genetics and Genomics.

Research output: Contribution to journalArticle

Decomposition analysis on soybean productivity increase under elevated CO2 using 3-D canopy model reveals synergestic effects of CO2 and light in photosynthesis

Song, Q., Srinivasan, V., Long, S. P. & Zhu, X. G., Sep 14 2020, In : Annals of botany. 126, 4, p. 601-614 14 p.

Research output: Contribution to journalArticle

Denitrifying bioreactor inflow manifold design for treatment of aquacultural wastewater

Lepine, C., Christianson, L., McIsaac, G. & Summerfelt, S., Feb 2020, In : Aquacultural Engineering. 88, 102036.

Research output: Contribution to journalArticle

Open Access

Denitrifying bioreactor woodchip recharge: Media properties after nine years

Christianson, L., Feyereisen, G., Hay, C., Tschirner, U., Kult, K., Wickramarathne, N., Hoover, N. & Soupir, M., 2020, In : Transactions of the ASABE. 63, 2, p. 407-416 10 p.

Research output: Contribution to journalArticle

Open Access

Deriving high-spatiotemporal-resolution leaf area index for agroecosystems in the U.S. Corn Belt using Planet Labs CubeSat and STAIR fusion data

Kimm, H., Guan, K., Jiang, C., Peng, B., Gentry, L. F., Wilkin, S., Wang, S., Cai, Y., Bernacchi, C. J., Peng, J. & Luo, Y., Mar 15 2020, In : Remote Sensing of Environment. 239, 111615.

Research output: Contribution to journalArticle

Design flow and nitrate removal evaluation of a wide denitrifying bioreactor with baffles

Dougherty, H., Cooke, R. A. C., Bhattarai, R. & Christianson, L., Dec 1 2020, In : Ecological Engineering. 158, 106068.

Research output: Contribution to journalArticle

Open Access

Development and Evaluation of SSR Markers Based on Large Scale Full-Length Transcriptome Sequencing in Sugarcane

Xiao, N., Wang, H., Yao, W., Zhang, M., Ming, R. & Zhang, J., 2020, (Accepted/In press) In : Tropical Plant Biology.

Research output: Contribution to journalArticle

Distribution and source identification of potentially toxic elements in agricultural soils through high-resolution sampling

Fan, M., Margenot, A. J., Zhang, H., Lal, R., Wu, J., Wu, P., Chen, F. & Gao, C., Aug 2020, In : Environmental Pollution. 263, 114527.

Research output: Contribution to journalArticle

Diversity of metabolite accumulation patterns in inner and outer seed coats of pomegranate: exploring their relationship with genetic mechanisms of seed coat development

Qin, G., Liu, C., Li, J., Qi, Y., Gao, Z., Zhang, X., Yi, X., Pan, H., Ming, R. & Xu, Y., Dec 1 2020, In : Horticulture Research. 7, 1, 10.

Research output: Contribution to journalArticle

DNA methylome and transcriptome landscapes revealed differential characteristics of dioecious flowers in papaya

Zhou, P., Zhang, X., Fatima, M., Ma, X., Fang, H., Yan, H. & Ming, R., Dec 1 2020, In : Horticulture Research. 7, 1, 81.

Research output: Contribution to journalArticle

Open Access

Do cover crops benefit soil microbiome? A meta-analysis of current research

Kim, N., Zabaloy, M. C., Guan, K. & Villamil, M. B., Mar 2020, In : Soil Biology and Biochemistry. 142, 107701.

Research output: Contribution to journalArticle

Open Access

During photosynthetic induction, biochemical and stomatal limitations differ between Brassica crops

Taylor, S. H., Orr, D. J., Carmo-Silva, E. & Long, S. P., 2020, (Accepted/In press) In : Plant Cell and Environment.

Research output: Contribution to journalArticle

Open Access

Early transcriptional responses to soybean cyst nematode HG Type 0 show genetic differences among resistant and susceptible soybeans

Miraeiz, E., Chaiprom, U., Afsharifar, A., Karegar, A., Drnevich, J. M. & E Hudson, M., Jan 2020, In : TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 133, 1, p. 87-102 16 p.

Research output: Contribution to journalArticle