Research Output

2018

Strengths and limitations of Nitrogen rate recommendations for corn and opportunities for improvement

Morris, T. F., Murrell, T. S., Beegle, D. B., Camberato, J. J., Ferguson, R. B., Grove, J., Ketterings, Q., Kyveryga, P. M., Laboski, C. A. M., McGrath, J. M., Meisinger, J. J., Melkonian, J., Moebius-Clune, B. N., Nafziger, E. D., Osmond, D., Sawyer, J. E., Scharf, P. C., Smith, W., Spargo, J. T., Van Es, H. M. & 1 others, Yang, H., Jan 1 2018, In : Agronomy Journal. 110, 1, p. 1-37 37 p.

Research output: Contribution to journalReview article

Striatal transcriptome of a mouse model of ADHD reveals a pattern of synaptic remodeling

Sorokina, A. M., Saul, M., Goncalves, T. M., Gogola, J. V., Majdak, P., Rodriguez-Zas, S. L. & Rhodes, J. S., Aug 2018, In : PloS one. 13, 8, e0201553.

Research output: Contribution to journalArticle

Substitution of peat moss with softwood biochar for soil-free marigold growth

Margenot, A. J., Griffin, D. E., Alves, B. S. Q., Rippner, D. A., Li, C. & Parikh, S. J., Feb 2018, In : Industrial Crops and Products. 112, p. 160-169 10 p.

Research output: Contribution to journalArticle

Sun-Induced Chlorophyll Fluorescence, Photosynthesis, and Light Use Efficiency of a Soybean Field from Seasonally Continuous Measurements

Miao, G., Guan, K., Yang, X., Bernacchi, C. J., Berry, J. A., DeLucia, E. H., Wu, J., Moore, C. E., Meacham, K., Cai, Y., Peng, B., Kimm, H. & Masters, M. D., Feb 2018, In : Journal of Geophysical Research: Biogeosciences. 123, 2, p. 610-623 14 p.

Research output: Contribution to journalArticle

Taxonomy of the order Mononegavirales: update 2018

Amarasinghe, G. K., Aréchiga Ceballos, N. G., Banyard, A. C., Basler, C. F., Bavari, S., Bennett, A. J., Blasdell, K. R., Briese, T., Bukreyev, A., Caì, Y., Calisher, C. H., Campos Lawson, C., Chandran, K., Chapman, C. A., Chiu, C. Y., Choi, K. S., Collins, P. L., Dietzgen, R. G., Dolja, V. V., Dolnik, O. & 71 others, Domier, L. L., Dürrwald, R., Dye, J. M., Easton, A. J., Ebihara, H., Echevarría, J. E., Fooks, A. R., Formenty, P. B. H., Fouchier, R. A. M., Freuling, C. M., Ghedin, E., Goldberg, T. L., Hewson, R., Horie, M., Hyndman, T. H., Jiāng, D., Kityo, R., Kobinger, G. P., Kondō, H., Koonin, E. V., Krupovic, M., Kurath, G., Lamb, R. A., Lee, B., Leroy, E. M., Maes, P., Maisner, A., Marston, D. A., Mor, S. K., Müller, T., Mühlberger, E., Ramírez, V. M. N., Netesov, S. V., Ng, T. F. F., Nowotny, N., Palacios, G., Patterson, J. L., Pawęska, J. T., Payne, S. L., Prieto, K., Rima, B. K., Rota, P., Rubbenstroth, D., Schwemmle, M., Siddell, S., Smither, S. J., Song, Q., Song, T., Stenglein, M. D., Stone, D. M., Takada, A., Tesh, R. B., Thomazelli, L. M., Tomonaga, K., Tordo, N., Towner, J. S., Vasilakis, N., Vázquez-Morón, S., Verdugo, C., Volchkov, V. E., Wahl, V., Walker, P. J., Wang, D., Wang, L. F., Wellehan, J. F. X., Wiley, M. R., Whitfield, A. E., Wolf, Y. I., Yè, G., Zhāng, Y. Z. & Kuhn, J. H., Aug 1 2018, In : Archives of Virology. 163, 8, p. 2283-2294 12 p.

Research output: Contribution to journalArticle

Tembotrione detoxification in 4-hydroxyphenylpyruvate dioxygenase (HPPD) inhibitor-resistant Palmer amaranth (Amaranthus palmeri S. Wats.)

Küpper, A., Peter, F., Zöllner, P., Lorentz, L., Tranel, P. J., Beffa, R. & Gaines, T. A., Oct 2018, In : Pest Management Science. 74, 10, p. 2325-2334 10 p.

Research output: Contribution to journalArticle

Temperate agroforestry research: considering multifunctional woody polycultures and the design of long-term field trials

Lovell, S. T., Dupraz, C., Gold, M., Jose, S., Revord, R., Stanek, E. & Wolz, K. J., Oct 1 2018, In : Agroforestry Systems. 92, 5, p. 1397-1415 19 p.

Research output: Contribution to journalReview article

The adaptive capacity of maize-based conservation agriculture systems to climate stress in tropical and subtropical environments: A meta-regression of yields

Steward, P. R., Dougill, A. J., Thierfelder, C., Pittelkow, C. M., Stringer, L. C., Kudzala, M. & Shackelford, G. E., Jan 1 2018, In : Agriculture, Ecosystems and Environment. 251, p. 194-202 9 p.

Research output: Contribution to journalArticle

The impact of disinfection Ct values on cytotoxicity of agricultural wastewaters: Ozonation vs. chlorination

Dong, S., Massalha, N., Plewa, M. J. & Nguyen, T. H., Nov 1 2018, In : Water Research. 144, p. 482-490 9 p.

Research output: Contribution to journalArticle

The impacts of fluctuating light on crop performance

Slattery, R. A., Walker, B. J., Weber, A. P. M. & Ort, D. R., Feb 2018, In : Plant physiology. 176, 2, p. 990-1003 14 p.

Research output: Contribution to journalArticle

The important but weakening maize yield benefit of grain filling prolongation in the US Midwest

Zhu, P., Jin, Z., Zhuang, Q., Ciais, P., Bernacchi, C., Wang, X., Makowski, D. & Lobell, D., Oct 2018, In : Global change biology. 24, 10, p. 4718-4730 13 p.

Research output: Contribution to journalArticle

The performance of early-generation perennial winter cereals at 21 sites across four continents

Hayes, R. C., Wang, S., Newell, M. T., Turner, K., Larsen, J., Gazza, L., Anderson, J. A., Bell, L. W., Cattani, D. J., Frels, K., Galassi, E., Morgounov, A. I., Revell, C. K., Thapa, D. B., Sacks, E. J., Sameri, M., Wade, L. J., Westerbergh, A., Shamanin, V., Amanov, A. & 1 others, Li, G. D., Apr 9 2018, In : Sustainability (Switzerland). 10, 4, 1124.

Research output: Contribution to journalArticle

The power and potential of genomics in weed biology and management

Ravet, K., Patterson, E. L., Krähmer, H., Hamouzová, K., Fan, L., Jasieniuk, M., Lawton-Rauh, A., Malone, J. M., McElroy, J. S., Merotto, A., Westra, P., Preston, C., Vila-Aiub, M. M., Busi, R., Tranel, P. J., Reinhardt, C., Saski, C., Beffa, R., Neve, P. & Gaines, T. A., Oct 2018, In : Pest Management Science. 74, 10, p. 2216-2225 10 p.

Research output: Contribution to journalArticle

Thiol Reactivity Analyses to Predict Mammalian Cell Cytotoxicity of Water Samples

Dong, S., Page, M. A., Wagner, E. D. & Plewa, M. J., Aug 7 2018, In : Environmental Science and Technology. 52, 15, p. 8822-8829 8 p.

Research output: Contribution to journalArticle

Tillage and fertilizer management effects on phosphorus runoff from minimal slope fields

Yuan, M., Fernández, F. G., Pittelkow, C. M., Greer, K. D. & Schaefer, D., May 1 2018, In : Journal of Environmental Quality. 47, 3, p. 462-470 9 p.

Research output: Contribution to journalArticle

Transcriptional and small RNA responses of the white mold fungus sclerotinia sclerotiorum to infection by a virulence-attenuating hypovirus

Marzano, S. Y. L., Neupane, A. & Domier, L., Dec 2018, In : Viruses. 10, 12, 713.

Research output: Contribution to journalArticle

Transcriptomic analysis of transgressive segregants revealed the central role of photosynthetic capacity and efficiency in biomass accumulation in sugarcane

Singh, R., Jones, T., Wai, C. M., Jifon, J., Nagai, C., Ming, R. & Yu, Q., Dec 1 2018, In : Scientific reports. 8, 1, 4415.

Research output: Contribution to journalArticle

Two aphid species, phorodon cannabis and Rhopalosiphum rufiabdominale, Identified as Potential Pests on Industrial Hemp, Cannabis sativa L., in the US Midwest

Lagos-Kutz, D., Potter, B., DiFonzo, C., Russell, H. & Hartman, G. L., Jan 1 2018, In : Crop, Forage and Turfgrass Management. 4, 1, 180032.

Research output: Contribution to journalArticle

Two colors, one species: The case of melissodes nigroaenea (Apidae: Eucerini), an important pollinator of cotton fields in Brazil

Grando, C., Amon, N. D., Clough, S. J., Guo, N., Wei, W., Azevedo, P., López-Uribe, M. M. & Zucchi, M. I., Oct 2018, In : Sociobiology. 65, 4, p. 645-653 9 p.

Research output: Contribution to journalArticle

Unique Flavanol-Anthocyanin Condensed Forms in Apache Red Purple Corn

Chatham, L. A., West, L., Berhow, M. A., Vermillion, K. E. & Juvik, J. A., Oct 17 2018, In : Journal of Agricultural and Food Chemistry. 66, 41, p. 10844-10854 11 p.

Research output: Contribution to journalArticle

Uptake of elemental or sulfate-S from fall- or spring-applied co-granulated fertilizer by corn—A stable isotope and modeling study

Degryse, F., da Silva, R. C., Baird, R., Beyrer, T., Below, F. & McLaughlin, M. J., May 15 2018, In : Field Crops Research. 221, p. 322-332 11 p.

Research output: Contribution to journalArticle

Use of in vitro kernel culture to study maize nitrogen and carbohydrate metabolism

Seebauer, J. R. & Below, F. E., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 3-13 11 p. (Methods in Molecular Biology; vol. 1676).

Research output: Chapter in Book/Report/Conference proceedingChapter

Variable selection in omics data: A practical evaluation of small sample sizes

Kirpich, A., Ainsworth, E. A., Wedow, J. M., Newman, J. R. B., Michailidis, G. & McIntyre, L. M., Jun 2018, In : PloS one. 13, 6, e0197910.

Research output: Contribution to journalArticle

Weed interference with no-till soyabeans influenced by fine-scale covariation between soil properties and cover crop performance

Eslami, S. V. & Davis, A. S., Dec 2018, In : Weed Research. 58, 6, p. 463-474 12 p.

Research output: Contribution to journalArticle

Widespread occurrence of quinone outside inhibitor fungicide-resistant isolates of cercospora sojina, causal agent of frogeye leaf spot of soybean, in the United States

Zhang, G., Allen, T. W., Bond, J. P., Fakhoury, A. M., Dorrance, A. E., Weber, L., Faske, T. R., Giesler, L. J., Hershman, D. E., Kennedy, B. S., Neves, D. L., Hollier, C. A., Kelly, H. M., Newman, M. A., Kleczewski, N. M., Koenning, S. R., Thiessen, L. D., Mehl, H. L., Zhou, T., Meyer, M. D. & 9 others, Mueller, D. S., Kandel, Y. R., Price, P. P., Rupe, J. C., Sikora, E. J., Standish, J. R., Tomaso-Peterson, M., Wise, K. A. & Bradley, C. A., Jan 1 2018, In : Plant Health Progress. 19, 4, p. 295-302 8 p.

Research output: Contribution to journalArticle

Winter legume-rice rotations can reduce nitrogen pollution and carbon footprint while maintaining net ecosystem economic benefits

Cai, S., Pittelkow, C. M., Zhao, X. & Wang, S., Sep 10 2018, In : Journal of Cleaner Production. 195, p. 289-300 12 p.

Research output: Contribution to journalArticle

Woodchip bioreactors as treatment for recirculating aquaculture systems’ wastewater: A cost assessment of nitrogen removal

Lepine, C., Christianson, L., Davidson, J. & Summerfelt, S., Nov 2018, In : Aquacultural Engineering. 83, p. 85-92 8 p.

Research output: Contribution to journalArticle

Yields and yield stability of no-till and chisel-plow fields in the Midwestern US Corn Belt

Daigh, A. L. M., Dick, W. A., Helmers, M. J., Lal, R., Lauer, J. G., Nafziger, E., Pederson, C. H., Strock, J., Villamil, M., Mukherjee, A. & Cruse, R., Apr 1 2018, In : Field Crops Research. 218, p. 243-253 11 p.

Research output: Contribution to journalArticle

Yield stability differs in commercial maize hybrids in response to changes in plant density, nitrogen fertility, and environment

Mastrodomenico, A. T., Haegele, J. W., Seebauer, J. R. & Below, F. E., Jan 1 2018, In : Crop Science. 58, 1, p. 230-241 12 p.

Research output: Contribution to journalArticle

2019

Abrasive grit application in organic red pepper: An opportunity for integrating nitrogen and weed management

Braun, E. E., Taylor Lovell, S., Babadoost, M., Forcella, F., Clay, S., Humburg, D. & Wortman, S. E., Jan 1 2019, In : HortScience. 54, 9, p. 1509-1516 8 p.

Research output: Contribution to journalArticle

Open Access

A Comparative Analysis of Anthropogenic CO2 Emissions at City Level Using OCO-2 Observations: A Global Perspective

Fu, P., Xie, Y., Moore, C. E., Myint, S. W. & Bernacchi, C. J., Sep 1 2019, In : Earth's Future. 7, 9, p. 1058-1070 13 p.

Research output: Contribution to journalArticle

Open Access

Active and inactive forms of biotin synthase occur in Heterodera glycines

Kwon, K. M., Bekal, S., Domier, L. L. & Lambert, K. N., Jan 1 2019, In : Journal of Nematology. 51, 1, e2019-69.

Research output: Contribution to journalArticle

Open Access

Agronomic, economic, and environmental performance of nitrogen rates and source in Bangladesh's coastal rice agroecosystems

Shah-Al-Emran, Krupnik, T. J., Kumar, V., Ali, M. Y. & Pittelkow, C. M., Sep 1 2019, In : Field Crops Research. 241, 107567.

Research output: Contribution to journalArticle

Open Access

Aligning Product Chemistry and Soil Context for Agronomic Reuse of Human-Derived Resources

Trimmer, J. T., Margenot, A. J., Cusick, R. D. & Guest, J. S., Jun 4 2019, In : Environmental Science and Technology. 53, 11, p. 6501-6510 10 p.

Research output: Contribution to journalArticle

Amino acid differences in the N-terminal half of the polyprotein of Chinese turnip mosaic virus isolates affect symptom expression in Nicotiana benthamiana and radish

Hu, W. X., Seo, E. Y., Cho, I. S., Kim, J. K., Ju, H. K., Kim, I. H., Choi, G. W., Kim, B., Ahn, C. H., Domier, L. L., Oh, S. K., Hammond, J. & Lim, H. S., Jun 1 2019, In : Archives of Virology. 164, 6, p. 1683-1689 7 p.

Research output: Contribution to journalArticle

Ammonia flux measurements above a corn canopy using relaxed eddy accumulation and a flux gradient system

Nelson, A. J., Lichiheb, N., Koloutsou-Vakakis, S., Rood, M. J., Heuer, M., Myles, L. T., Joo, E., Miller, J. & Bernacchi, C., Jan 15 2019, In : Agricultural and Forest Meteorology. 264, p. 104-113 10 p.

Research output: Contribution to journalArticle

Analysis of genetic diversity of lychee (Litchi chinensis Sonn.) and wild forest relatives in the Sapindaceae from Vietnam using microsatellites

Tran, H., Kanzaki, S., Triest, L., Hormaza, I., Kuk, N. J., Ming, R., Bousquet, J., Khasa, D. & Van Damme, P., Dec 1 2019, In : Genetic Resources and Crop Evolution. 66, 8, p. 1653-1669 17 p.

Research output: Contribution to journalArticle

Analysis of the manage drain concentration database to evaluate agricultural management effects on drainage water nutrient concentrations

Hertzberger, A., Pittelkow, C. M., Harmel, R. D. & Christianson, L. E., Jan 1 2019, In : Transactions of the ASABE. 62, 4, p. 929-939 11 p.

Research output: Contribution to journalArticle

An assessment of true and false positive detection rates of stepwise epistatic model selection as a function of sample size and number of markers

Chen, A. H., Ge, W., Metcalf, W., Jakobsson, E., Mainzer, L. S. & Lipka, A. E., May 1 2019, In : Heredity. 122, 5, p. 660-671 12 p.

Research output: Contribution to journalArticle

An evaluation of primers for detecting denitrifiers via their functional genes

Ma, Y., Zilles, J. L. & Kent, A. D., Apr 2019, In : Environmental Microbiology. 21, 4, p. 1196-1210 15 p.

Research output: Contribution to journalArticle

A physical model-based method for retrieving urban land surface temperatures under cloudy conditions

Fu, P., Xie, Y., Weng, Q., Myint, S., Meacham-Hensold, K. & Bernacchi, C., Sep 1 2019, In : Remote Sensing of Environment. 230, 111191.

Research output: Contribution to journalArticle

A practical guide to genetic gain

Rutkoski, J. E., 2019, Advances in Agronomy. Sparks, D. L. (ed.). Academic Press Inc., p. 217-249 33 p. (Advances in Agronomy; vol. 157).

Research output: Chapter in Book/Report/Conference proceedingChapter

Are we approaching a water ceiling to maize yields in the United States?

Delucia, E. H., Chen, S., Guan, K., Peng, B., Li, Y., Gomez-Casanovas, N., Kantola, I. B., Bernacchi, C., Huang, Y., Long, S. P. & Ort, D. R., Jun 18 2019, In : Ecosphere. 10, 6, e02773.

Research output: Contribution to journalArticle

Open Access

A single nucleotide change in the overlapping MP and CP reading frames results in differences in symptoms caused by two isolates of Youcai mosaic virus

Ju, H. K., Kim, I. H., Hu, W. X., Kim, B., Choi, G. W., Kim, J., Lim, Y. P., Domier, L. L., Hammond, J. & Lim, H. S., Jan 1 2019, In : Archives of Virology.

Research output: Contribution to journalArticle

Assembly of allele-aware, chromosomal-scale autopolyploid genomes based on Hi-C data

Zhang, X., Zhang, S., Zhao, Q., Ming, R. & Tang, H., Aug 1 2019, In : Nature plants. 5, 8, p. 833-845 13 p.

Research output: Contribution to journalArticle

Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop

Souza, G. M., Van Sluys, M. A., Lembke, C. G., Lee, H., Margarido, G. R. A., Hotta, C. T., Gaiarsa, J. W., Diniz, A. L., Oliveira, M. D. M., Ferreira, S. D. S., Nishiyama, M. Y., Ten-Caten, F., Ragagnin, G. T., Andrade, P. D. M., De Souza, R. F., Nicastro, G. G., Pandya, R., Kim, C., Guo, H., Durham, A. M. & 9 others, Carneiro, M. S., Zhang, J., Zhang, X., Zhang, Q., Ming, R., Schatz, M. C., Davidson, B., Paterson, A. H. & Heckerman, D., Dec 6 2019, In : GigaScience. 8, 12, giz129.

Research output: Contribution to journalArticle

Open Access