Research Output 1975 2020

2018

Soybean mosaic virus: a successful potyvirus with a wide distribution but restricted natural host range

Hajimorad, M. R., Domier, L. L., Tolin, S. A., Whitham, S. A. & Saghai Maroof, M. A., Jul 2018, In : Molecular Plant Pathology. 19, 7, p. 1563-1579 17 p.

Research output: Contribution to journalArticle

Soybean mosaic virus
Potyvirus
Mosaic Viruses
Host Specificity
host range

Soybean response to nitrogen application across the United States: A synthesis-analysis

Mourtzinis, S., Kaur, G., Orlowski, J. M., Shapiro, C. A., Lee, C. D., Wortmann, C., Holshouser, D., Nafziger, E. D., Kandel, H., Niekamp, J., Ross, W. J., Lofton, J., Vonk, J., Roozeboom, K. L., Thelen, K. D., Lindsey, L. E., Staton, M., Naeve, S. L., Casteel, S. N., Wiebold, W. J. & 1 others, Conley, S. P., Jan 2018, In : Field Crops Research. 215, p. 74-82 9 p.

Research output: Contribution to journalArticle

soybean
soybeans
synthesis
nitrogen
seed

Spectroscopic Indicators for Cytotoxicity of Chlorinated and Ozonated Effluents from Wastewater Stabilization Ponds and Activated Sludge

Massalha, N., Dong, S., Plewa, M. J., Borisover, M. & Nguyen, T. H., Mar 6 2018, In : Environmental Science and Technology. 52, 5, p. 3167-3174 8 p.

Research output: Contribution to journalArticle

Stabilization ponds
Sewage sludge
Cytotoxicity
activated sludge
Effluents
surface reflectance
Electric fuses
reflectance
remote sensing
satellite data

Strengths and limitations of Nitrogen rate recommendations for corn and opportunities for improvement

Morris, T. F., Murrell, T. S., Beegle, D. B., Camberato, J. J., Ferguson, R. B., Grove, J., Ketterings, Q., Kyveryga, P. M., Laboski, C. A. M., McGrath, J. M., Meisinger, J. J., Melkonian, J., Moebius-Clune, B. N., Nafziger, E. D., Osmond, D., Sawyer, J. E., Scharf, P. C., Smith, W., Spargo, J. T., Van Es, H. M. & 1 others, Yang, H., Jan 1 2018, In : Agronomy Journal. 110, 1, p. 1-37 37 p.

Research output: Contribution to journalReview article

nitrogen fertilizers
corn
nitrogen
ecological footprint
fertilizer rates

Striatal transcriptome of a mouse model of ADHD reveals a pattern of synaptic remodeling

Sorokina, A. M., Saul, M., Goncalves, T. M., Gogola, J. V., Majdak, P., Rodriguez-Zas, S. L. & Rhodes, J. S., Aug 2018, In : PloS one. 13, 8, e0201553.

Research output: Contribution to journalArticle

Corpus Striatum
Attention Deficit Disorder with Hyperactivity
Transcriptome
transcriptome
Genes

Substitution of peat moss with softwood biochar for soil-free marigold growth

Margenot, A. J., Griffin, D. E., Alves, B. S. Q., Rippner, D. A., Li, C. & Parikh, S. J., Feb 2018, In : Industrial Crops and Products. 112, p. 160-169 10 p.

Research output: Contribution to journalArticle

biochar
Sphagnum
softwood
peat
soil

Sun-Induced Chlorophyll Fluorescence, Photosynthesis, and Light Use Efficiency of a Soybean Field from Seasonally Continuous Measurements

Miao, G., Guan, K., Yang, X., Bernacchi, C. J., Berry, J. A., DeLucia, E. H., Wu, J., Moore, C. E., Meacham, K., Cai, Y., Peng, B., Kimm, H. & Masters, M. D., Feb 2018, In : Journal of Geophysical Research: Biogeosciences. 123, 2, p. 610-623 14 p.

Research output: Contribution to journalArticle

light use efficiency
soybeans
photosynthesis
Photosynthesis
chlorophylls

Tembotrione detoxification in 4-hydroxyphenylpyruvate dioxygenase (HPPD) inhibitor-resistant Palmer amaranth (Amaranthus palmeri S. Wats.)

Küpper, A., Peter, F., Zöllner, P., Lorentz, L., Tranel, P. J., Beffa, R. & Gaines, T. A., Oct 2018, In : Pest Management Science. 74, 10, p. 2325-2334 10 p.

Research output: Contribution to journalArticle

tembotrione
Amaranthus palmeri
herbicides
hydroxylation
metabolism

Temperate agroforestry research: considering multifunctional woody polycultures and the design of long-term field trials

Lovell, S. T., Dupraz, C., Gold, M., Jose, S., Revord, R., Stanek, E. & Wolz, K. J., Oct 1 2018, In : Agroforestry Systems. 92, 5, p. 1397-1415 19 p.

Research output: Contribution to journalReview article

polyculture
agroforestry
field experimentation
woody plant
woody plants

The adaptive capacity of maize-based conservation agriculture systems to climate stress in tropical and subtropical environments: A meta-regression of yields

Steward, P. R., Dougill, A. J., Thierfelder, C., Pittelkow, C. M., Stringer, L. C., Kudzala, M. & Shackelford, G. E., Jan 1 2018, In : Agriculture, Ecosystems and Environment. 251, p. 194-202 9 p.

Research output: Contribution to journalArticle

maize
agriculture
climate
corn
heat stress

The impact of disinfection Ct values on cytotoxicity of agricultural wastewaters: Ozonation vs. chlorination

Dong, S., Massalha, N., Plewa, M. J. & Nguyen, T. H., Nov 1 2018, In : Water Research. 144, p. 482-490 9 p.

Research output: Contribution to journalArticle

Ozonization
Disinfection
Chlorination
Cytotoxicity
chlorination

The impacts of fluctuating light on crop performance

Slattery, R. A., Walker, B. J., Weber, A. P. M. & Ort, D. R., Feb 2018, In : Plant physiology. 176, 2, p. 990-1003 14 p.

Research output: Contribution to journalArticle

Light
Photosynthesis
crops
canopy
C4 photosynthesis

The important but weakening maize yield benefit of grain filling prolongation in the US Midwest

Zhu, P., Jin, Z., Zhuang, Q., Ciais, P., Bernacchi, C., Wang, X., Makowski, D. & Lobell, D., Oct 2018, In : Global change biology. 24, 10, p. 4718-4730 13 p.

Research output: Contribution to journalArticle

maize
food security
Crops
Drought
crop yield

The performance of early-generation perennial winter cereals at 21 sites across four continents

Hayes, R. C., Wang, S., Newell, M. T., Turner, K., Larsen, J., Gazza, L., Anderson, J. A., Bell, L. W., Cattani, D. J., Frels, K., Galassi, E., Morgounov, A. I., Revell, C. K., Thapa, D. B., Sacks, E. J., Sameri, M., Wade, L. J., Westerbergh, A., Shamanin, V., Amanov, A. & 1 others, Li, G. D., Apr 9 2018, In : Sustainability (Switzerland). 10, 4, 1124.

Research output: Contribution to journalArticle

cereal
wheat
breeding
parents
winter

The power and potential of genomics in weed biology and management

Ravet, K., Patterson, E. L., Krähmer, H., Hamouzová, K., Fan, L., Jasieniuk, M., Lawton-Rauh, A., Malone, J. M., McElroy, J. S., Merotto, A., Westra, P., Preston, C., Vila-Aiub, M. M., Busi, R., Tranel, P. J., Reinhardt, C., Saski, C., Beffa, R., Neve, P. & Gaines, T. A., Oct 2018, In : Pest Management Science. 74, 10, p. 2216-2225 10 p.

Research output: Contribution to journalArticle

weed biology
weed control
weeds
genomics
genome

Thiol Reactivity Analyses to Predict Mammalian Cell Cytotoxicity of Water Samples

Dong, S., Page, M. A., Wagner, E. D. & Plewa, M. J., Aug 7 2018, In : Environmental Science and Technology. 52, 15, p. 8822-8829 8 p.

Research output: Contribution to journalArticle

thiol
Cytotoxicity
Sulfhydryl Compounds
Cells
Water

Tillage and fertilizer management effects on phosphorus runoff from minimal slope fields

Yuan, M., Fernández, F. G., Pittelkow, C. M., Greer, K. D. & Schaefer, D., May 1 2018, In : Journal of Environmental Quality. 47, 3, p. 462-470 9 p.

Research output: Contribution to journalArticle

Fertilizers
Runoff
tillage
Phosphorus
fertilizer
Manihot
cassava
Photosynthesis
Carboxylation
cultivar

Transcriptional and small RNA responses of the white mold fungus sclerotinia sclerotiorum to infection by a virulence-attenuating hypovirus

Marzano, S. Y. L., Neupane, A. & Domier, L., Dec 2018, In : Viruses. 10, 12, 713.

Research output: Contribution to journalArticle

Ascomycota
Virulence
Fungi
RNA
Messenger RNA

Transcriptomic analysis of transgressive segregants revealed the central role of photosynthetic capacity and efficiency in biomass accumulation in sugarcane

Singh, R., Jones, T., Wai, C. M., Jifon, J., Nagai, C., Ming, R. & Yu, Q., Dec 1 2018, In : Scientific reports. 8, 1, 4415.

Research output: Contribution to journalArticle

transcriptomics
sugarcane
biomass production
biomass
energy

Two aphid species, phorodon cannabis and Rhopalosiphum rufiabdominale, Identified as Potential Pests on Industrial Hemp, Cannabis sativa L., in the US Midwest

Lagos-Kutz, D., Potter, B., DiFonzo, C., Russell, H. & Hartman, G. L., Jan 1 2018, In : Crop, Forage and Turfgrass Management. 4, 1, 180032.

Research output: Contribution to journalArticle

Phorodon
Rhopalosiphum
Cannabis
Cannabis sativa
hemp

Two colors, one species: The case of melissodes nigroaenea (Apidae: Eucerini), an important pollinator of cotton fields in Brazil

Grando, C., Amon, N. D., Clough, S. J., Guo, N., Wei, W., Azevedo, P., López-Uribe, M. M. & Zucchi, M. I., Oct 2018, In : Sociobiology. 65, 4, p. 645-653 9 p.

Research output: Contribution to journalArticle

Melissodes
Apidae
pollinating insects
cotton
Brazil

Unique Flavanol-Anthocyanin Condensed Forms in Apache Red Purple Corn

Chatham, L. A., West, L., Berhow, M. A., Vermillion, K. E. & Juvik, J. A., Oct 17 2018, In : Journal of Agricultural and Food Chemistry. 66, 41, p. 10844-10854 11 p.

Research output: Contribution to journalArticle

Anthocyanins
flavanols
Zea mays
anthocyanins
pelargonidin

Uptake of elemental or sulfate-S from fall- or spring-applied co-granulated fertilizer by corn—A stable isotope and modeling study

Degryse, F., da Silva, R. C., Baird, R., Beyrer, T., Below, F. E. & McLaughlin, M. J., May 15 2018, In : Field Crops Research. 221, p. 322-332 11 p.

Research output: Contribution to journalArticle

stable isotopes
sulfates
stable isotope
fertilizer
fertilizers

Use of in vitro kernel culture to study maize nitrogen and carbohydrate metabolism

Seebauer, J. R. & Below, F. E., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 3-13 11 p. (Methods in Molecular Biology; vol. 1676).

Research output: Chapter in Book/Report/Conference proceedingChapter

Carbohydrate Metabolism
Zea mays
Nitrogen
Growth
Ear

Variable selection in omics data: A practical evaluation of small sample sizes

Kirpich, A., Ainsworth, E. A., Wedow, J. M., Newman, J. R. B., Michailidis, G. & McIntyre, L. M., Jun 2018, In : PloS one. 13, 6, e0197910.

Research output: Contribution to journalArticle

Analysis of variance (ANOVA)
Sample Size
Analysis of Variance
analysis of variance
Biomarkers

Winter legume-rice rotations can reduce nitrogen pollution and carbon footprint while maintaining net ecosystem economic benefits

Cai, S., Pittelkow, C. M., Zhao, X. & Wang, S., Sep 10 2018, In : Journal of Cleaner Production. 195, p. 289-300 12 p.

Research output: Contribution to journalArticle

Carbon footprint
carbon footprint
Ecosystems
Pollution
rice

Woodchip bioreactors as treatment for recirculating aquaculture systems’ wastewater: A cost assessment of nitrogen removal

Lepine, C., Christianson, L. E., Davidson, J. & Summerfelt, S., Nov 2018, In : Aquacultural Engineering. 83, p. 85-92 8 p.

Research output: Contribution to journalArticle

aquaculture system
recirculating aquaculture systems
wood chips
bioreactors
bioreactor

Yields and yield stability of no-till and chisel-plow fields in the Midwestern US Corn Belt

Daigh, A. L. M., Dick, W. A., Helmers, M. J., Lal, R., Lauer, J. G., Nafziger, E. D., Pederson, C. H., Strock, J., Villamil, M. B., Mukherjee, A. & Cruse, R., Apr 1 2018, In : Field Crops Research. 218, p. 243-253 11 p.

Research output: Contribution to journalArticle

Corn Belt region
plows
no-tillage
maize
corn

Yield stability differs in commercial maize hybrids in response to changes in plant density, nitrogen fertility, and environment

Mastrodomenico, A. T., Haegele, J. W., Seebauer, J. R. & Below, F. E., Jan 1 2018, In : Crop Science. 58, 1, p. 230-241 12 p.

Research output: Contribution to journalArticle

plant density
corn
nitrogen
nitrogen fertilizers
genotype-environment interaction
2019

A Comparative Analysis of Anthropogenic CO2 Emissions at City Level Using OCO-2 Observations: A Global Perspective

Fu, P., Xie, Y., Moore, C. E., Myint, S. W. & Bernacchi, C. J., Sep 1 2019, In : Earth's Future. 7, 9, p. 1058-1070 13 p.

Research output: Contribution to journalArticle

Open Access
global perspective
fossil fuel
seasonality
vegetation
carbon
glucokinase
Glucokinase
Anthocyanins
Medical problems
phenolic acids

Agronomic, economic, and environmental performance of nitrogen rates and source in Bangladesh's coastal rice agroecosystems

Shah-Al-Emran, Krupnik, T. J., Kumar, V., Ali, M. Y. & Pittelkow, C. M., Sep 1 2019, In : Field Crops Research. 241, 107567.

Research output: Contribution to journalArticle

Open Access
economic performance
agricultural ecosystem
Bangladesh
agroecosystems
agronomic traits

Aligning Product Chemistry and Soil Context for Agronomic Reuse of Human-Derived Resources

Trimmer, J. T., Margenot, A. J., Cusick, R. & Guest, J. S., Jun 4 2019, In : Environmental Science and Technology. 53, 11, p. 6501-6510 10 p.

Research output: Contribution to journalArticle

Soils
Sanitation
Nutrients
struvite
sanitation

Amino acid differences in the N-terminal half of the polyprotein of Chinese turnip mosaic virus isolates affect symptom expression in Nicotiana benthamiana and radish

Hu, W. X., Seo, E. Y., Cho, I. S., Kim, J. K., Ju, H. K., Kim, I. H., Choi, G. W., Kim, B., Ahn, C. H., Domier, L. L., Oh, S. K., Hammond, J. & Lim, H. S., Jun 1 2019, In : Archives of Virology. 164, 6, p. 1683-1689 7 p.

Research output: Contribution to journalArticle

Raphanus
Mosaic Viruses
Polyproteins
Brassica napus
Tobacco

Ammonia flux measurements above a corn canopy using relaxed eddy accumulation and a flux gradient system

Nelson, A. J., Lichiheb, N., Koloutsou-Vakakis, S., Rood, M. J., Heuer, M., Myles, L. T., Joo, E., Miller, J. & Bernacchi, C., Jan 15 2019, In : Agricultural and Forest Meteorology. 264, p. 104-113 10 p.

Research output: Contribution to journalArticle

flux measurement
eddy
ammonia
maize
canopy

Analysis of genetic diversity of lychee (Litchi chinensis Sonn.) and wild forest relatives in the Sapindaceae from Vietnam using microsatellites

Tran, H., Kanzaki, S., Triest, L., Hormaza, I., Kuk, N. J., Ming, R., Bousquet, J., Khasa, D. & Van Damme, P., Dec 1 2019, In : Genetic Resources and Crop Evolution. 66, 8, p. 1653-1669 17 p.

Research output: Contribution to journalArticle

Sapindaceae
Litchi
Litchi chinensis
Vietnam
Microsatellite Repeats

Analysis of the manage drain concentration database to evaluate agricultural management effects on drainage water nutrient concentrations

Hertzberger, A., Pittelkow, C. M., Harmel, R. D. & Christianson, L. E., Jan 1 2019, In : Transactions of the ASABE. 62, 4, p. 929-939 11 p.

Research output: Contribution to journalArticle

agricultural management
drainage water
Phosphorus
Nutrients
Drainage

An assessment of true and false positive detection rates of stepwise epistatic model selection as a function of sample size and number of markers

Chen, A. H., Ge, W., Metcalf, W., Jakobsson, E., Mainzer, L. S. & Lipka, A. E., May 1 2019, In : Heredity. 122, 5, p. 660-671 12 p.

Research output: Contribution to journalArticle

Sample Size
Gene Frequency
Zea mays
Nucleotides
Genome

A natural colorant system from corn: Flavone-anthocyanin copigmentation for altered hues and improved shelf life

Chatham, L. A., Howard, J. E. & Juvik, J. A., Jan 1 2019, (Accepted/In press) In : Food chemistry. 310, 125734.

Research output: Contribution to journalArticle

flavone
Anthocyanins
flavones
Zea mays
anthocyanins

Antagonism of Trichoderma-based biofungicides against Brazilian and North American isolates of Sclerotinia sclerotiorum and growth promotion of soybean

Macena, A. M. F., Kobori, N. N., Mascarin, G. M., Vida, J. B. & Hartman, G. L., Jan 1 2019, (Accepted/In press) In : BioControl.

Research output: Contribution to journalArticle

biopesticides
Sclerotinia sclerotiorum
growth promotion
Trichoderma
thiophanate-methyl

A physical model-based method for retrieving urban land surface temperatures under cloudy conditions

Fu, P., Xie, Y., Weng, Q., Myint, S., Meacham-Hensold, K. & Bernacchi, C., Sep 1 2019, In : Remote Sensing of Environment. 230, 111191.

Research output: Contribution to journalArticle

physical models
surface temperature
land surface
Mean square error
Temperature
meta-analysis
Productivity
productivity
compost
Soils

Are we approaching a water ceiling to maize yields in the United States?

Delucia, E. H., Chen, S., Guan, K., Peng, B., Li, Y., Gomez-Casanovas, N., Kantola, I. B., Bernacchi, C., Huang, Y., Long, S. P. & Ort, D. R., Jun 18 2019, In : Ecosphere. 10, 6, e02773.

Research output: Contribution to journalArticle

Open Access
maize
corn
vapor pressure
water
water use efficiency

A single nucleotide change in the overlapping MP and CP reading frames results in differences in symptoms caused by two isolates of Youcai mosaic virus

Ju, H. K., Kim, I. H., Hu, W. X., Kim, B., Choi, G. W., Kim, J., Lim, Y. P., Domier, L. L., Hammond, J. & Lim, H. S., Jan 1 2019, In : Archives of Virology.

Research output: Contribution to journalArticle

Mosaic Viruses
Reading Frames
Capsid Proteins
Nucleotides
Proteins

Assembly of allele-aware, chromosomal-scale autopolyploid genomes based on Hi-C data

Zhang, X., Zhang, S., Zhao, Q., Ming, R. & Tang, H., Aug 1 2019, In : Nature Plants. 5, 8, p. 833-845 13 p.

Research output: Contribution to journalArticle

autopolyploidy
alleles
genome
chromosomes
diploidy

Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop

Souza, G. M., Van Sluys, M. A., Lembke, C. G., Lee, H., Margarido, G. R. A., Hotta, C. T., Gaiarsa, J. W., Diniz, A. L., Oliveira, M. D. M., Ferreira, S. D. S., Nishiyama, M. Y., Ten-Caten, F., Ragagnin, G. T., Andrade, P. D. M., de Souza, R. F., Nicastro, G. G., Pandya, R., Kim, C., Guo, H., Durham, A. M. & 9 others, Carneiro, M. S., Zhang, J., Zhang, X., Zhang, Q., Ming, R., Schatz, M. C., Davidson, B., Paterson, A. H. & Heckerman, D., Dec 1 2019, In : GigaScience. 8, 12

Research output: Contribution to journalArticle

Open Access
Saccharum
Polyploidy
Biomass
Crops
Genes

Assessing safe food handling knowledge and practices of food service managers in Doha, Qatar

Asim, H. S., Elnemr, I., Goktepe, I., Feng, H., Park, H. K., Alzeyara, S., AlHajri, M. & Kushad, M. M., Jul 1 2019, In : Food Science and Technology International. 25, 5, p. 440-448 9 p.

Research output: Contribution to journalArticle

Qatar
Food Services
food handling
Food Handling
food service