College of Medicine at Illinois

Research Output 1976 2019

2017

Low-cost hand-held probe for depth-resolved low-coherence interferometry

Pande, P., Shelton, R. L., Monroy, G. L., Nolan, R. M. & Boppart, S. A., Jan 1 2017, In : Biomedical Optics Express. 8, 1, p. 338-348 11 p., #279361.

Research output: Contribution to journalArticle

Interferometry
interferometry
Hand
Costs and Cost Analysis
Tympanic Membrane

Malware detection in adversarial settings: Exploiting feature evolutions and confusions in android apps

Yang, W., Kong, D., Xie, T. & Gunter, C., Dec 4 2017, Proceedings - 33rd Annual Computer Security Applications Conference, ACSAC 2017. Association for Computing Machinery, p. 288-302 15 p. (ACM International Conference Proceeding Series; vol. Part F132521).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Application programs
Android (operating system)
Malware
Semantics

Mass spectrometry-based cross-linking study shows that the Psb28 protein binds to cytochrome b559 in Photosystem II

Weisz, D. A., Liu, H., Zhang, H., Thangapandian, S., Tajkhorshid, E., Gross, M. L. & Pakrasi, H. B., Feb 28 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 9, p. 2224-2229 6 p.

Research output: Contribution to journalArticle

Photosystem II Protein Complex
Mass Spectrometry
Proteins
cytochrome b559
Isotopes

Maternal dead-end 1 promotes translation of nanos1 by binding the eiF3 complex

Aguero, T., Jin, Z., Chorghade, S., Kalsotra, A., King, M. L. & Yang, J., Oct 15 2017, In : Development (Cambridge). 144, 20, p. 3755-3765 11 p.

Research output: Contribution to journalArticle

germ cell
embryo
Germ Cells
Mothers
Fertilization

Mdm2 mediates FMRP- and Gp1 mGluR-dependent protein translation and neural network activity

Liu, D. C., Seimetz, J., Lee, K. Y., Kalsotra, A., Chung, H. J., Lu, H. & Tsai, N-P., Oct 15 2017, In : Human molecular genetics. 26, 20, p. 3895-3908 14 p.

Research output: Contribution to journalArticle

Fragile X Mental Retardation Protein
Protein Biosynthesis
Fragile X Syndrome
Neuronal Plasticity
Animal Behavior

Mechanisms of Salmonella pathogenesis in animal models

Palmer, A. D. & Slauch, J. M., Nov 17 2017, In : Human and Ecological Risk Assessment. 23, 8, p. 1877-1892 16 p.

Research output: Contribution to journalReview article

Salmonella
Salmonella Infections
Animals
Animal Models
animal

Mining on someone else’s dime: Mitigating covert mining operations in clouds and enterprises

Tahir, R., Huzaifa, M., Das, A., Ahmad, M., Gunter, C., Zaffar, F., Caesar, M. C. & Borisov, N., Jan 1 2017, Research in Attacks, Intrusions, and Defenses - 20th International Symposium, RAID 2017, Proceedings. Polychronakis, M., Antonakakis, M., Dacier, M. & Bailey, M. (eds.). Springer-Verlag, p. 287-310 24 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10453 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Mining
Miners
Industry
Program processors
Virtualization

Mitochondrial VDAC1: A key gatekeeper as potential therapeutic target

Camara, A. K. S., Zhou, Y. F., Wen, P. C., Tajkhorshid, E. & Kwok, W. M., Jun 30 2017, In : Frontiers in Physiology. 8, JUN, 460.

Research output: Contribution to journalReview article

Voltage-Dependent Anion Channel 1
Mitochondria
Therapeutics
Apoptosis
Apoptosis Regulatory Proteins

Molluscum contagiosum virus MC159 abrogates cIAP1- NEMO interactions and inhibits NEMO polyubiquitination

Biswas, S. & Shisler, J. L., Aug 1 2017, In : Journal of virology. 91, 15, e00276-17.

Research output: Contribution to journalArticle

Molluscum contagiosum virus
Inhibitor of Apoptosis Proteins
IKappaB kinase
apoptosis
proteins

Mom genes: A role for loss of maternal Ube3a in GABAergic neurons in Angelman syndrome

Christian, C., Jul 1 2017, In : Epilepsy Currents. 17, 4, p. 237-238 2 p.

Research output: Contribution to journalArticle

Angelman Syndrome
GABAergic Neurons
Mothers
Genes

More Than Reading, Writing, and Arithmetic

Chapman-Novakofski, K. M., May 1 2017, In : Journal of Nutrition Education and Behavior. 49, 5, 1 p.

Research output: Contribution to journalEditorial

Reading

Morphogenesis along the animal-vegetal axis: Fates of primary quartet micromere daughters in the gastropod Crepidula fornicata

Lyons, D. C., Perry, K. J. & Henry, J. J., Sep 15 2017, In : BMC Evolutionary Biology. 17, 1, 217.

Research output: Contribution to journalArticle

morphogenesis
gastropod
Gastropoda
embryo
animal

Mov10 suppresses retroelements and regulates neuronal development and function in the developing brain

Skariah, G., Seimetz, J., Norsworthy, M., Lannom, M. C., Kenny, P. J., Elrakhawy, M., Forsthoefel, C., Drnevich, J., Kalsotra, A. & Ceman, S. S., Jun 29 2017, In : BMC Biology. 15, 1, 54.

Research output: Contribution to journalArticle

Moloney murine leukemia virus
Retroelements
retrotransposons
leukemia
Viruses

Multivariate associations of fluid intelligence and NAA

Nikolaidis, A., Baniqued, P. L., Kranz, M. B., Scavuzzo, C. J., Barbey, A. K., Kramer, A. F. & Larsen, R. J., Jan 1 2017, In : Cerebral Cortex. 27, 4, p. 2607-2616 10 p.

Research output: Contribution to journalArticle

Intelligence
Parietal Lobe
Frontal Lobe
N-acetylaspartate
Principal Component Analysis

Myeloid STAT3 promotes lung tumorigenesis by transforming tumor immunosurveillance into tumor-promoting inflammation

Zhou, J., Qu, Z., Sun, F., Han, L., Li, L., Yan, S., Stabile, L. P., Chen, L-F., Siegfried, J. M. & Xiao, G., Mar 1 2017, In : Cancer Immunology Research. 5, 3, p. 257-268 12 p.

Research output: Contribution to journalArticle

Immunologic Monitoring
Carcinogenesis
Inflammation
Lung
Neoplasms

Myotonic dystrophy: disease repeat range, penetrance, age of onset, and relationship between repeat size and phenotypes

Yum, K., Wang, E. T. & Kalsotra, A., Jun 1 2017, In : Current Opinion in Genetics and Development. 44, p. 30-37 8 p.

Research output: Contribution to journalReview article

Myotonic Dystrophy
Penetrance
Genetic Testing
Age of Onset
Myotonia

Network Neuroscience Theory of Human Intelligence

Barbey, A. K., Nov 1 2017, In : Trends in Cognitive Sciences.

Research output: Contribution to journalArticle

Neurosciences
Intelligence
Individuality
Brain
Aptitude

Noninvasive in vivo optical coherence tomography tracking of chronic otitis media in pediatric subjects after surgical intervention

Monroy, G. L., Pande, P., Nolan, R. M., Shelton, R. L., Porter, R. G., Novak, M. A., Spillman, D. R., Chaney, E. J., McCormick, D. T. & Boppart, S. A., Dec 1 2017, In : Journal of biomedical optics. 22, 12, 121614.

Research output: Contribution to journalArticle

Pediatrics
Optical tomography
tomography
middle ear
infectious diseases

Non-invasive optical assessment of viscosity of middle ear effusions in otitis media

Monroy, G. L., Pande, P., Shelton, R. L., Nolan, R. M., Spillman, D. R., Porter, R. G., Novak, M. A. & Boppart, S. A., Mar 1 2017, In : Journal of Biophotonics. 10, 3, p. 394-403 10 p.

Research output: Contribution to journalArticle

middle ear
Otitis Media with Effusion
Optical tomography
Otitis Media
Viscosity

Nonlinearity-tailored fiber laser technology for low-noise, ultra-wideband tunable femtosecond light generation

Liu, X., Laegsgaard, J., Iegorov, R., Svane, A. S., Ilday, F. Ö., Tu, H., Boppart, S. A. & Turchinovich, D., Dec 1 2017, In : Photonics Research. 5, 6, p. 750-761 12 p., 2327-9125/17/060750-12.

Research output: Contribution to journalArticle

Fiber lasers
Ultra-wideband (UWB)
low noise
fiber lasers
nonlinearity

Nopal (Opuntia ficus indica) protects from metabolic endotoxemia by modifying gut microbiota in obese rats fed high fat/sucrose diet

Sánchez-Tapia, M., Aguilar-López, M., Pérez-Cruz, C., Pichardo-Ontiveros, E., Wang, M., Donovan, S. M., Tovar, A. R. & Torres, N., Dec 1 2017, In : Scientific Reports. 7, 1, 4716.

Research output: Contribution to journalArticle

Opuntia
Endotoxemia
High Fat Diet
Sucrose
Obesity

Nutritional status, brain network organization, and general intelligence

Zamroziewicz, M. K., Talukdar, M. T., Zwilling, C. E. & Barbey, A. K., Nov 1 2017, In : NeuroImage. 161, p. 241-250 10 p.

Research output: Contribution to journalArticle

Nutritional Status
Intelligence
Organizations
Brain
Monounsaturated Fatty Acids

Nutrition Economics

Chapman-Novakofski, K. M., Sep 1 2017, In : Journal of Nutrition Education and Behavior. 49, 8, 1 p.

Research output: Contribution to journalEditorial

Economics

Observed differences in child picky eating behavior between home and childcare locations

Luchini, V., Musaad, S., Lee, S-Y. & Donovan, S. M., Sep 1 2017, In : Appetite. 116, p. 123-131 9 p.

Research output: Contribution to journalArticle

Feeding Behavior
Meals
Caregivers
Eating
Lunch

Oncopig soft-tissue sarcomas recapitulate key transcriptional features of human sarcomas

Schachtschneider, K. M., Liu, Y., Mäkeläinen, S., Madsen, O., Rund, L. A., Groenen, M. A. M. & Schook, L. B., Dec 1 2017, In : Scientific Reports. 7, 1, 2624.

Research output: Contribution to journalArticle

Sarcoma
Cell Line
Leiomyosarcoma
Research
Tumor Cell Line

Patterns of humeral asymmetry among Late Pleistocene humans

Sparacello, V. S., Villotte, S., Shackelford, L. L. & Trinkaus, E., Aug 1 2017, In : Comptes Rendus - Palevol. 16, 5-6, p. 680-689 10 p.

Research output: Contribution to journalArticle

asymmetry
Pleistocene
body size
Paleolithic
handedness

Polyphosphate and RNA differentially modulate the contact pathway of blood clotting

Gajsiewicz, J. M., Smith, S. A. & Morrissey, J. H., Feb 3 2017, In : Journal of Biological Chemistry. 292, 5, p. 1808-1814 7 p.

Research output: Contribution to journalArticle

Polyphosphates
Blood Coagulation
Blood
RNA
Chemical activation

Predicting Pulmonary Function from Phone Sensors

Cheng, Q., Juen, J., Bellam, S., Fulara, N., Close, D., Silverstein, J. C. & Schatz, B. R., Nov 1 2017, In : Telemedicine and e-Health. 23, 11, p. 913-919 7 p.

Research output: Contribution to journalArticle

Lung
Running
Spirometry
Chronic Obstructive Pulmonary Disease
Health Status

Predictors of memory in healthy aging: Polyunsaturated fatty acid balance and fornix white matter integrity

Zamroziewicz, M. K., Paul, E. J., Zwilling, C. E. & Barbey, A. K., Jan 1 2017, In : Aging and Disease. 8, 4, p. 372-383 12 p.

Research output: Contribution to journalArticle

Omega-6 Fatty Acids
Unsaturated Fatty Acids
Phospholipids
White Matter
Brain

Preface

van der Ark, L. A., Wiberg, M., Culpepper, S. A., Douglas, J. A. & Wang, W. C., 2017, In : Springer Proceedings in Mathematics and Statistics. 196, p. v

Research output: Contribution to journalEditorial

Preoperative Metabolic Syndrome Is Predictive of Significant Gastric Cancer Mortality after Gastrectomy: The Fujian Prospective Investigation of Cancer (FIESTA) Study

Hu, D., Peng, F., Lin, X., Chen, G., Zhang, H., Liang, B., Ji, K., Lin, J., Chen, L-F., Zheng, X. & Niu, W., Feb 1 2017, In : EBioMedicine. 15, p. 73-80 8 p.

Research output: Contribution to journalArticle

Gastrectomy
Stomach Neoplasms
Hazards
Mortality
Neoplasms

Presynaptic neuronal nicotinic receptors differentially shape select inputs to auditory thalamus and are negatively impacted by aging

Sottile, S. Y., Hackett, T. A., Cai, R., Ling, L., Llano, D. A. & Caspary, D. M., Nov 22 2017, In : Journal of Neuroscience. 37, 47, p. 11377-11389 13 p.

Research output: Contribution to journalArticle

Geniculate Bodies
Nicotinic Receptors
Thalamus
Cholinergic Agents
Cholinergic Receptors
Publications
students
Productivity
Students
Journal Impact Factor

Prolyl isomerase PIN1 regulates the stability, transcriptional activity and oncogenic potential of BRD4

Hu, X., Dong, S. H., Chen, J., Zhou, X. Z., Chen, R., Nair, S. K., Lu, K. P. & Chen, L-F., Sep 7 2017, In : Oncogene. 36, 36, p. 5177-5188 12 p.

Research output: Contribution to journalArticle

Peptidylprolyl Isomerase
Stomach Neoplasms
Neoplasms
Ubiquitination
Threonine

Psychological reactance theory, sport, and exercise: A bright future

Quick, B. L., Reynolds-Tylus, T. & Gonzalez, A. M., Aug 9 2017, Persuasion and Communication in Sport, Exercise, and Physical Activity. Taylor and Francis, p. 91-103 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Psychological Theory
Sports

Quantitative characterization of mechanically indented in vivo human skin in adults and infants using optical coherence tomography

Huang, P. C., Pande, P., Shelton, R. L., Joa, F., Moore, D., Gillman, E., Kidd, K., Nolan, R. M., Odio, M., Carr, A. & Boppart, S. A., Mar 1 2017, In : Journal of biomedical optics. 22, 3, 034001.

Research output: Contribution to journalArticle

Optical tomography
Skin
tomography
pathology
Tissue

Quantitative multimodal 3D characterization of cellular dynamics in wounded skin

Li, J., Bower, A. J., Chaney, E. J., Marjanovic, M. & Boppart, S. A., Jan 1 2017, Bio-Optics: Design and Application, BODA 2017. OSA - The Optical Society, (Optics InfoBase Conference Papers; vol. Part F62-BODA 2017).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Skin

Quantitative Pneumatic Otoscopy Using a Light-Based Ranging Technique

Shelton, R. L., Nolan, R. M., Monroy, G. L., Pande, P., Novak, M. A., Porter, R. G. & Boppart, S. A., Aug 1 2017, In : JARO - Journal of the Association for Research in Otolaryngology. 18, 4, p. 555-568 14 p.

Research output: Contribution to journalArticle

Otoscopy
Tympanic Membrane
Light
Ear
Otitis Media with Effusion

Quantitative ultrasound and the pancreas: Demonstration of early detection capability

Miller, R. J., Han, A., Gates-Tanzer, L. T., Erdman, J. W., Shisler, J. L., Wallig, M. A. & O'Brien, W. D., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8091743. (IEEE International Ultrasonics Symposium, IUS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

alternating current
cancer
injection
progressions
cells
Violence
violence
event
Law Enforcement
Research

Ratiometric analysis of optical coherence tomography–measured in vivo retinal layer thicknesses for the detection of early diabetic retinopathy

Bhaduri, B., Shelton, R. L., Nolan, R. M., Hendren, L., Almasov, A., Labriola, L. T. & Boppart, S. A., Nov 1 2017, In : Journal of Biophotonics. 10, 11, p. 1430-1441 12 p.

Research output: Contribution to journalArticle

Diabetic Retinopathy
Medical problems
diabetes mellitus
Diabetes Mellitus
Ganglia

Reliable, Valid Questionnaires in JNEB Collections

Chapman-Novakofski, K. M., Feb 1 2017, In : Journal of Nutrition Education and Behavior. 49, 2, 1 p.

Research output: Contribution to journalEditorial

Surveys and Questionnaires

RemBrain: Exploring dynamic biospatial networks with mosaicmatrices and mirror glyphs

Ma, C., Pellolio, F., Llano, D. A., Stebbings, K. A., Kenyon, R. V. & ElisabetaMarai, G., Nov 1 2017, In : Journal of Imaging Science and Technology. 61, 6, 060404.

Research output: Contribution to journalArticle

Mirrors
mirrors
Chemical activation
age factor
activation

Review: Capripoxvirus Diseases: Current Status and Opportunities for Control

Tuppurainen, E. S. M., Venter, E. H., Shisler, J. L., Gari, G., Mekonnen, G. A., Juleff, N., Lyons, N. A., De Clercq, K., Upton, C., Bowden, T. R., Babiuk, S. & Babiuk, L. A., Jun 1 2017, In : Transboundary and Emerging Diseases. 64, 3, p. 729-745 17 p.

Research output: Contribution to journalReview article

Capripoxvirus
Vaccines
vaccines
Lumpy Skin Disease
lumpy skin disease

Review of optical coherence tomography in oncology

Wang, J., Xu, Y. & Boppart, S. A., Dec 1 2017, In : Journal of biomedical optics. 22, 12, 121711.

Research output: Contribution to journalReview article

Oncology
Optical tomography
tomography
Imaging techniques
Tumors

Risk assessment heuristics: Cues and intention to use a condom in casual sex

Rinaldi-Miles, A., Quick, B. L. & McCloskey, L., Apr 1 2017, In : Health Education Journal. 76, 3, p. 313-325 13 p.

Research output: Contribution to journalArticle

Condoms
Cues
Students
Multivariate Analysis
Heuristics

RNA modifications and structures cooperate to guide RNA-protein interactions

Lewis, C. J. T., Pan, T. & Kalsotra, A., Mar 1 2017, In : Nature Reviews Molecular Cell Biology. 18, 3, p. 202-210 9 p.

Research output: Contribution to journalReview article

Guide RNA
RNA
Proteins
Transcriptome
Gene Expression

Selective killing of Helicobacter pylori with pH-responsive helix–coil conformation transitionable antimicrobial polypeptides

Xiong, M., Bao, Y., Xu, X., Wang, H., Han, Z., Wang, Z., Liu, Y., Huang, S., Song, Z., Chen, J., Peek, R. M., Yin, L., Chen, L-F. & Cheng, J., Nov 28 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 48, p. 12675-12680 6 p.

Research output: Contribution to journalArticle

Helicobacter pylori
Bacteria
Stomach
Peptides
Glutamic Acid

Serum cortisol mediates the relationship between fecal Ruminococcus and brain N-acetylaspartate in the young pig

Mudd, A. T., Berding, K., Wang, M., Donovan, S. M. & Dilger, R. N., Nov 2 2017, In : Gut Microbes. 8, 6, p. 589-600 12 p.

Research output: Contribution to journalArticle

Ruminococcus
Hydrocortisone
Microbiota
Swine
Brain

Silica particles contribute to the procoagulant activity of DNA and polyphosphate isolated using commercial kits

Smith, S. A., Baker, C. J., Gajsiewicz, J. M. & Morrissey, J. H., Jul 6 2017, In : Blood. 130, 1, p. 88-91 4 p.

Research output: Contribution to journalLetter