College of Medicine at Illinois

Research Output 1976 2019

2018

Investigating the healing mechanisms of an angiogenesis-promoting topical treatment for diabetic wounds using multimodal microscopy

Li, J., Bower, A. J., Arp, Z., Olson, E. J., Holland, C., Chaney, E. J., Marjanovic, M., Pande, P., Alex, A. & Boppart, S. A., Mar 1 2018, In : Journal of Biophotonics. 11, 3, e201700195.

Research output: Contribution to journalArticle

wound healing
angiogenesis
Optical tomography
Optical Coherence Tomography
healing

Investigating the role of interleukin-1 beta and glutamate in inflammatory bowel disease and epilepsy using discovery browsing

Rindflesch, T. C., Blake, C. L., Cairelli, M. J., Fiszman, M., Zeiss, C. J. & Kilicoglu, H., Dec 27 2018, In : Journal of Biomedical Semantics. 9, 1, 25.

Research output: Contribution to journalArticle

Interleukin-1beta
Inflammatory Bowel Diseases
Glutamic Acid
Epilepsy
MEDLINE

In vitro assay for measuring receptor-kinase activity in the bacillus subtilis chemotaxis pathway

Walukiewicz, H. E., Ordal, G. W. & Rao, C. V., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 95-105 11 p. (Methods in Molecular Biology; vol. 1729).

Research output: Chapter in Book/Report/Conference proceedingChapter

Chemotaxis
Bacillus subtilis
Phosphotransferases
Signal Transduction
Carrier Proteins

In vivo detection of nanometer-scale structural changes of the human tympanic membrane in otitis media

Dsouza, R., Won, J., Monroy, G. L., Hill, M. C., Porter, R. G., Novak, M. A. & Boppart, S. A., Dec 1 2018, In : Scientific Reports. 8, 1, 8777.

Research output: Contribution to journalArticle

Tympanic Membrane
Otitis Media
Optical Coherence Tomography
Otoscopy
Ear

KRAS G12D and TP53 R167H Cooperate to Induce Pancreatic Ductal Adenocarcinoma in Sus scrofa Pigs

Principe, D. R., Overgaard, N. H., Park, A. J., Diaz, A. M., Torres, C., McKinney, R., Dorman, M. J., Castellanos, K., Schwind, R., Dawson, D. W., Rana, A., Maker, A., Munshi, H. G., Rund, L. A., Grippo, P. J. & Schook, L. B., Dec 1 2018, In : Scientific Reports. 8, 1, 12548.

Research output: Contribution to journalArticle

Sus scrofa
Pancreatic Ducts
Adenocarcinoma
Swine
Translational Medical Research

Label-free optical imaging technologies for rapid translation and use during intraoperative surgical and tumor margin assessment

Boppart, S. A., Brown, J. Q., Farah, C. S., Kho, E., Marcu, L., Saunders, C. M. & Sterenborg, H. J. C. M., Feb 1 2018, In : Journal of biomedical optics. 23, 2, 021104.

Research output: Contribution to journalArticle

Labels
Tumors
margins
tumors
Imaging techniques
Cultural Competency
community service
nutrition research
Hispanic Americans
Research

Longitudinal factor analysis of the Comprehensive Feeding Practices Questionnaire among parents of preschool-aged children

the STRONG Kids Team, Oct 1 2018, In : Appetite. 129, p. 94-102 9 p.

Research output: Contribution to journalArticle

Preschool Children
Statistical Factor Analysis
Parents
Surveys and Questionnaires
Child Behavior

Magnetomotive Displacement of the Tympanic Membrane Using Magnetic Nanoparticles: Toward Enhancement of Sound Perception

Huang, P. C., Chaney, E. J., Shelton, R. L. & Boppart, S. A., Dec 1 2018, In : IEEE Transactions on Biomedical Engineering. 65, 12, p. 2837-2846 10 p., 8325518.

Research output: Contribution to journalArticle

Acoustic waves
Nanoparticles
Membranes
Optical tomography
Hearing aids

Main-chain mutagenesis reveals intrahelical coupling in an ion channel voltage-sensor

Infield, D. T., Matulef, K., Galpin, J. D., Lam, K., Tajkhorshid, E., Ahern, C. A. & Valiyaveetil, F. I., Dec 1 2018, In : Nature Communications. 9, 1, 5055.

Research output: Contribution to journalArticle

mutagenesis
Mutagenesis
Hydrogen Bonding
Ion Channels
Amides

Menthol stereoisomers exhibit different effects on α4β2 nAChR upregulation and dopamine neuron spontaneous firing

Henderson, B. J., Grant, S., Wong, B. K., Shahoei, R., Huard, S. M., Saladi, S. S. M., Tajkhorshid, E., Dougherty, D. A. & Lester, H. A., Nov 1 2018, In : eNeuro. 5, 6, e0465-18.2018.

Research output: Contribution to journalArticle

Menthol
Stereoisomerism
Dopaminergic Neurons
Up-Regulation
Aptitude

Microscopic view of lipids and their diverse biological functions

Wen, P. C., Mahinthichaichan, P., Trebesch, N., Jiang, T., Zhao, Z., Shinn, E., Wang, Y., Shekhar, M., Kapoor, K., Chan, C. K. & Tajkhorshid, E., Aug 1 2018, In : Current Opinion in Structural Biology. 51, p. 177-186 10 p.

Research output: Contribution to journalReview article

Lipids
Membranes
Physiological Phenomena
Lipid Bilayers
Hydrodynamics

Mindfulness training induces structural connectome changes in insula networks

Sharp, P. B., Sutton, B., Paul, E. J., Sherepa, N., Hillman, C. H., Cohen, N. J., Kramer, A. F., Prakash, R. S., Heller, W., Telzer, E. H. & Barbey, A. K., May 21 2018, In : Scientific Reports. 8, 1, 7929.

Research output: Contribution to journalArticle

Open Access
Connectome
Mindfulness
Meditation
Physical Fitness
Brain

Mobile Apps for the Dietary Approaches to Stop Hypertension (DASH): App Quality Evaluation

DiFilippo, K. N., Huang, W-H. & Chapman-Novakofski, K. M., Jun 1 2018, In : Journal of Nutrition Education and Behavior. 50, 6, p. 620-625 6 p.

Research output: Contribution to journalArticle

Mobile Applications
Hypertension
Education
Nutritionists
Malus

Molecular, phylogenetic and developmental analyses of Sall proteins in bilaterians

Lorente-Sorolla, J., Truchado-Garcia, M., Perry, K. J., Henry, J. J. & Grande, C., Apr 10 2018, In : EvoDevo. 9, 1, 9.

Research output: Contribution to journalArticle

Zinc Fingers
Snails
zinc finger motif
phylogenetics
protein

Molecular insight into drug exporters within the cellular membrane

Tajkhorshid, E., Jul 1 2018, In : Pharmacological Research. 133, 1 p.

Research output: Contribution to journalEditorial

Membranes
Pharmaceutical Preparations

Mothers, Children, and Eating: Past, Present, and Future

Chapman-Novakofski, K. M., Apr 1 2018, In : Journal of Nutrition Education and Behavior. 50, 4, p. 330-331 2 p.

Research output: Contribution to journalEditorial

Eating
Mothers

Mouse testing methods in psychoneuroimmunology 2.0: Measuring behavioral responses

Towers, A. E., York, J. M., Baynard, T., Gainey, S. J. & Freund, G. G., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 221-258 38 p. (Methods in Molecular Biology; vol. 1781).

Research output: Chapter in Book/Report/Conference proceedingChapter

Psychoneuroimmunology
Lethargy
Endocrine System
Executive Function
Immunologic Factors

Multi-modal fitness and cognitive training to enhance fluid intelligence

Daugherty, A. M., Zwilling, C., Paul, E. J., Sherepa, N., Allen, C., Kramer, A. F., Hillman, C. H., Cohen, N. J. & Barbey, A. K., Jan 1 2018, In : Intelligence. 66, p. 32-43

Research output: Contribution to journalArticle

Multivariate Regression Methods for the Analysis of Stature

Konigsberg, L. W. & Jantz, L. M., 2018, New Perspectives in Forensic Human Skeletal Identification. Latham, K. E., Bartelink, E. J. & Finnegan, M. (eds.). Elsevier, p. 87-104

Research output: Chapter in Book/Report/Conference proceedingChapter

Multivariate Regression
Bone
Prior distribution
Linear regression
Maximum Likelihood Estimator

Nam Lot (MIS 5) and Duoi U'Oi (MIS 4) Southeast Asian sites revisited: Zooarchaeological and isotopic evidences

Bacon, A. M., Bourgon, N., Dufour, E., Zanolli, C., Duringer, P., Ponche, J. L., Antoine, P. O., Shackelford, L. L., Huong, N. T. M., Sayavonkhamdy, T., Patole-Edoumba, E. & Demeter, F., Dec 26 2018, In : Palaeogeography, Palaeoclimatology, Palaeoecology. 512, p. 132-144 13 p.

Research output: Contribution to journalArticle

rainforest
rain forests
woodlands
Panthera
mammals

Narrative review of culinary interventions with children in schools to promote healthy eating: Directions for future research and practice

Muzaffar, H., Metcalfe, J. J. & Fiese, B., Jun 1 2018, In : Current Developments in Nutrition. 2, 6, nzy016.

Research output: Contribution to journalReview article

Open Access
school children
healthy diet
Cooking
cooking
body mass index

Network dynamics theory of human intelligence

Nikolaidis, A. & Barbey, A. K., Jan 1 2018, The Cambridge Handbook of the Neuroscience of Creativity. Cambridge University Press, p. 382-404 23 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Intelligence
Creativity
Aptitude
Brain
Neuroimaging

NRF: A naive re-identification framework

Santu, S. K. K., Bindschadler, V., Zhai, C. & Gunter, C., Oct 15 2018, WPES 2018 - Proceedings of the 2018 Workshop on Privacy in the Electronic Society, co-located with CCS 2018. Association for Computing Machinery, p. 121-132 12 p. (Proceedings of the ACM Conference on Computer and Communications Security).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Agglomeration
Big data

Online C-benevolent job scheduling on multiple machines

Yu, G. & Jacobson, S. H., Mar 1 2018, In : Optimization Letters. 12, 2, p. 251-263 13 p.

Research output: Contribution to journalArticle

Deterministic Scheduling
Job Scheduling
Competitive Ratio
Scheduling Algorithm
Online Scheduling

Optical assessment of the in vivo tympanic membrane status using a handheld optical coherence tomography-based otoscope

Park, K., Cho, N. H., Jeon, M., Lee, S. H., Jang, J. H., Boppart, S. A., Jung, W. & Kim, J., Apr 3 2018, In : Acta Oto-Laryngologica. 138, 4, p. 367-374 8 p.

Research output: Contribution to journalArticle

Otoscopes
Tympanic Membrane
Optical Coherence Tomography
Endoscopes
Ear Diseases

Optical parametric amplification of gated confocal reflectance microscopy signals in scattering media

Sun, Y., Tu, H., You, S. & Boppart, S. A., Jan 1 2018, Frontiers in Optics, FIO 2018. OSA - The Optical Society, Vol. Part F114-FIO 2018.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Amplification
Microscopic examination
Photons
Scattering
Imaging techniques

Persistent protection against pathology and paroxysms by P2X7R antagonism

Christian, C., Jan 1 2018, In : Epilepsy Currents. 18, 1, p. 42-44 3 p.

Research output: Contribution to journalComment/debate

Pathology

Physical Activity and Nutrition Education Programs

Chapman-Novakofski, K. M., Nov 1 2018, In : Journal of Nutrition Education and Behavior. 50, 10, 1 p.

Research output: Contribution to journalEditorial

Education

Pneumatic low-coherence interferometry otoscope to quantify tympanic membrane mobility and middle ear pressure

Won, J., Monroy, G. L., Huang, P. C., Dsouza, R., Hill, M. C., Novak, M. A., Porter, R. G., Chaney, E., Barkalifa, R. & Boppart, S. A., Feb 1 2018, In : Biomedical Optics Express. 9, 2, p. 397-409 13 p., #308905.

Research output: Contribution to journalArticle

middle ear pressure
Otoscopes
Interferometry
Tympanic Membrane
pneumatics

Predictors and Outcomes of Mealtime Emotional Climate in Families with Preschoolers

STRONG Kids Team, Mar 1 2018, In : Journal of Pediatric Psychology. 43, 2, p. 195-206 12 p.

Research output: Contribution to journalArticle

Meals
Food
Emotions
Mental Health
Mothers

Primary and Secondary Caregiver Reports of Quality of Life in Pediatric Asthma: Are they Comparable?

Everhart, R. S., Greenlee, J. L., Winter, M. A. & Fiese, B., Jun 1 2018, In : Applied Research in Quality of Life. 13, 2, p. 371-383 13 p.

Research output: Contribution to journalArticle

caregiver
quality of life
medication
parents

Probing key elements of teixobactin-lipid II interactions in membranes

Wen, P. C., Vanegas, J. M., Rempe, S. B. & Tajkhorshid, E., Jan 1 2018, In : Chemical Science. 9, 34, p. 6997-7008 12 p.

Research output: Contribution to journalArticle

Membranes
Phosphates
Depsipeptides
Conformations
muramyl-NAc-(pentapeptide)pyrophosphoryl-undecaprenol

Property inference attacks on fully connected neural networks using permutation invariant representations

Ganju, K., Wang, Q., Yang, W., Gunter, C. & Borisov, N., Oct 15 2018, CCS 2018 - Proceedings of the 2018 ACM SIGSAC Conference on Computer and Communications Security. Association for Computing Machinery, p. 619-633 15 p. (Proceedings of the ACM Conference on Computer and Communications Security).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Neural networks
Classifiers
Invariance
Learning systems

Prospects for Common Ground

Eskridge Jr, W. N. & Wilson, R. F. (ed.), Nov 2018, Religious Freedom, LGBT Rights, and the Prospects for Common Ground. Eskridge Jr, W. N. & Wilson, R. F. (eds.). Cambridge University Press, p. 1-8

Research output: Chapter in Book/Report/Conference proceedingChapter

P-TEFb: Finding its ways to release promoter-proximally paused RNA polymerase II

Li, Y., Liu, M., Chen, L-F. & Chen, R., Mar 15 2018, In : Transcription. 9, 2, p. 88-94 7 p.

Research output: Contribution to journalReview article

Positive Transcriptional Elongation Factor B
RNA Polymerase II
Small Nuclear Ribonucleoproteins
Genetic Promoter Regions
Genes

PTSD symptoms and overt attention to contextualized emotional faces: Evidence from eye tracking

Milanak, M. E., Judah, M. R., Berenbaum, H., Kramer, A. F. & Neider, M., Nov 1 2018, In : Psychiatry Research. 269, p. 408-413 6 p.

Research output: Contribution to journalArticle

Post-Traumatic Stress Disorders
Fear
Emotions

Push versus pull

Jacobson, S. H., Apr 1 2018, In : Communications of the ACM. 61, 4, p. 25-27 3 p.

Research output: Contribution to journalArticle

PyContact: Rapid, Customizable, and Visual Analysis of Noncovalent Interactions in MD Simulations

Scheurer, M., Rodenkirch, P., Siggel, M., Bernardi, R. C., Schulten, K., Tajkhorshid, E. & Rudack, T., Feb 6 2018, In : Biophysical journal. 114, 3, p. 577-583 7 p.

Research output: Contribution to journalArticle

Molecular Dynamics Simulation
Purinergic P2X3 Receptors
Protein Interaction Maps
Biological Science Disciplines
Ions
Irritable Bowel Syndrome
Athletes
Matched-Pair Analysis
Habits
Surveys and Questionnaires

Rating Procedures for Improving Identification of Exposure to Potentially Traumatic Events When Using Checklist Measures

Schoenleber, M., Milanak, M. E., Schuld, E. & Berenbaum, H., Jan 1 2018, (Accepted/In press) In : Journal of Aggression, Maltreatment and Trauma.

Research output: Contribution to journalArticle

Checklist
Interviews
History
Wounds and Injuries
Research

Reconstitution and substrate specificity for isopentenyl pyrophosphate of the antiviral radical SAM enzyme viperin

Chakravarti, A., Selvadurai, K., Shahoei, R., Lee, H., Fatma, S., Tajkhorshid, E. & Huang, R. H., Jan 1 2018, In : Journal of Biological Chemistry. 293, 36, p. 14122-14133 12 p.

Research output: Contribution to journalReview article

Substrate Specificity
Antiviral Agents
Substrates
Enzymes
Mevalonic Acid

Religious Freedom, LGBT Rights, and the Prospects for Common Ground

Eskridge Jr, W. N. (ed.) & Wilson, R. F. (ed.), Nov 2018, Cambridge University Press.

Research output: Book/ReportBook

Lesbian
Person
Religious Freedom
Bisexual
Faith

Response: Real-time, secure, and privacy-aware video redaction system

Chen, B., Nahrstedt, K. & Gunter, C., Nov 5 2018, Proceedings of the 15th EAI International Conference on Mobile and Ubiquitous Systems: Computing, Networking and Services, Mobiquitous 2018. Association for Computing Machinery, p. 39-48 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Cameras
Encapsulation
Mobile Applications
Telemedicine
Obesity
Exercise
Counseling

RNA helicase Mov10 is essential for gastrulation and central nervous system development

Skariah, G., Perry, K. J., Drnevich, J., Henry, J. J. & Ceman, S. S., Apr 1 2018, In : Developmental Dynamics. 247, 4, p. 660-671 12 p.

Research output: Contribution to journalArticle

RNA Helicases
Gastrulation
Central Nervous System
Xenopus
MicroRNAs

Salivary MicroRNAs: Diagnostic Markers of Mild Traumatic Brain Injury in Contact-Sport

Di Pietro, V., Porto, E., Ragusa, M., Barbagallo, C., Davies, D., Forcione, M., Logan, A., Di Pietro, C., Purrello, M., Grey, M., Hammond, D., Sawlani, V., Barbey, A. K. & Belli, A., Aug 20 2018, In : Frontiers in Molecular Neuroscience. 11, 290.

Research output: Contribution to journalArticle

Brain Concussion
MicroRNAs
Saliva
Sports
Athletes

Salt bridges gate ?-catenin activation at intercellular junctions

Barrick, S., Li, J., Kong, X., Ray, A., Tajkhorshid, E. & Leckband, D., Jan 15 2018, In : Molecular biology of the cell. 29, 2, p. 111-122 12 p.

Research output: Contribution to journalArticle

Catenins
Intercellular Junctions
Salts
Vinculin
Cadherins

Scholarship of Learning—Finding the Time

Chapman-Novakofski, K. M., Jun 1 2018, In : Journal of Nutrition Education and Behavior. 50, 6, 1 p.

Research output: Contribution to journalEditorial

Learning

Selective Permeability of Carboxysome Shell Pores to Anionic Molecules

Mahinthichaichan, P., Morris, D. M., Wang, Y., Jensen, G. J. & Tajkhorshid, E., Oct 4 2018, In : Journal of Physical Chemistry B. 122, 39, p. 9110-9118 9 p.

Research output: Contribution to journalArticle

Carbon Monoxide
Anions
Permeability
permeability
Negative ions