Research Output 1976 2020

2018

Being Transgender in the Era of Trump: Compassion Should Pick Up Where Science Leaves Off

Wilson, R. F., 2018, In : UC Irvine Law Review. 8, 4, p. 583-616

Research output: Contribution to journalArticle

science
suicide attempt
scientific community
suicide
experience

Biophotonics: The big picture

Marcu, L., Boppart, S. A., Hutchinson, M. R., Popp, J. & Wilson, B. C., Feb 2018, In : Journal of biomedical optics. 23, 2, 021103.

Research output: Contribution to journalArticle

physical sciences
microbalances
Direction compound

BRD4 regulates cellular senescence in gastric cancer cells via E2F/miR-106b/p21 axis

Dong, X., Hu, X., Chen, J., Hu, D. & Chen, L-F., Feb 1 2018, In : Cell Death and Disease. 9, 2, 203.

Research output: Contribution to journalArticle

Cell Aging
Stomach Neoplasms
Neoplasms
3' Untranslated Regions
Proteins

Butyrate and dietary soluble fiber improve neuroinflammation associated with aging in mice

Matt, S. M., Allen, J. M., Lawson, M. A., Mailing, L. J., Woods, J. A. & Johnson, R. W., Aug 14 2018, In : Frontiers in immunology. 9, AUG, 1832.

Research output: Contribution to journalArticle

Butyrates
Dietary Fiber
Diet
Inulin
Volatile Fatty Acids

By faith alone: When religious beliefs and child welfare collide

Wilson, R. F. & Sanders, S. R., Mar 2018, The Contested Place of Religion in Family Law. Wilson, R. F. (ed.). New York: Cambridge University Press, p. 308-346 13

Research output: Chapter in Book/Report/Conference proceedingChapter

Calcium-Induced Lipid Nanocluster Structures: Sculpturing of the Plasma Membrane

Hallock, M. J., Greenwood, A. I., Wang, Y., Morrissey, J. H., Tajkhorshid, E., Rienstra, C. M. & Pogorelov, T. V., Dec 18 2018, In : Biochemistry. 57, 50, p. 6897-6905 9 p.

Research output: Contribution to journalArticle

Nanoclusters
Cell membranes
Cell Membrane
Calcium
Lipids
Anniversaries and Special Events
Education
Food
CASP8 and FADD-Like Apoptosis Regulating Protein
Interferons
Protein Isoforms
Chemical activation
Proteins

Changes in Nutrition Labeling in 1970 vs 2018

Chapman-Novakofski, K., Feb 2018, In : Journal of Nutrition Education and Behavior. 50, 2, 1 p.

Research output: Contribution to journalEditorial

Food Labeling

Characterization of an Inducible Alcoholic Liver Fibrosis Model for Hepatocellular Carcinoma Investigation in a Transgenic Porcine Tumorigenic Platform

Gaba, R. C., Mendoza-Elias, N., Regan, D. P., Garcia, K. D., Lokken, R. P., Schwind, R. M., Eichner, M., Thomas, F. M., Rund, L. A., Schook, L. B. & Schachtschneider, K. M., Aug 2018, In : Journal of Vascular and Interventional Radiology. 29, 8, p. 1194-1202.e1

Research output: Contribution to journalArticle

Liver Cirrhosis
Hepatocellular Carcinoma
Swine
Fibrosis
Liver
Immune Evasion
Vaccinia virus
Genome
Genes
Antigen-Presenting Cells

Child body mass index, genotype and parenting in the prediction of restrictive feeding

the STRONG Kids Team, Apr 2018, In : Pediatric Obesity. 13, 4, p. 239-246 8 p.

Research output: Contribution to journalArticle

Parenting
Body Mass Index
Genotype
Caregivers
Catechol O-Methyltransferase

Children's Food Preferences and Education Programs

Chapman-Novakofski, K., Mar 2018, In : Journal of Nutrition Education and Behavior. 50, 3, p. 216-320 105 p.

Research output: Contribution to journalEditorial

Food Preferences
Education

Combined hardware and computational optical wavefront correction

South, F. A., Kurokawa, K., Liu, Z., Liu, Y. Z., Miller, D. T. & Boppart, S. A., Jun 1 2018, In : Biomedical Optics Express. 9, 6, p. 2562-2574 13 p., #322898.

Research output: Contribution to journalArticle

aberration
hardware
Photons
Photoreceptor Cells
Computer-Assisted Image Processing

Complementary use of polarization-sensitive and standard OCT metrics for enhanced intraoperative differentiation of breast cancer

Wang, J., Xu, Y., Mesa, K. J., South, F. A., Chaney, E. J., Spillman, D. R., Barkalifa, R., Marjanovic, M., Carney, P. S., Higham, A. M., Liu, Z. G. & Boppart, S. A., Dec 1 2018, In : Biomedical Optics Express. 9, 12, p. 6519-6528 10 p., #346713.

Research output: Contribution to journalArticle

Optical Coherence Tomography
breast
cancer
adipose tissues
Breast Neoplasms

Constructing atomic structural models into cryo-EM densities using molecular dynamics – Pros and cons

Wang, Y., Shekhar, M., Thifault, D., Williams, C. J., McGreevy, R., Richardson, J., Singharoy, A. & Tajkhorshid, E., Nov 2018, In : Journal of Structural Biology. 204, 2, p. 319-328 10 p.

Research output: Contribution to journalArticle

Structural Models
Molecular Dynamics Simulation
Galactosidases
Electrons
Research

Consumer Acceptance Comparison Between Seasoned and Unseasoned Vegetables

Feng, Y., Albiol Tapia, M., Okada, K., Castaneda Lazo, N. B., Chapman-Novakofski, K., Phillips, C. & Lee, S. Y., Feb 1 2018, In : Journal of food science. 83, 2, p. 446-453 8 p.

Research output: Contribution to journalArticle

consumer acceptance
Vegetables
vegetables
flavorings
Spices

Consumer heterogeneity in sugar consumption with special reference to fat and cholesterol intake

Asirvatham, J. & McNamara, P. E., Jan 2 2018, In : International Journal of Food Sciences and Nutrition. 69, 1, p. 108-116 9 p.

Research output: Contribution to journalArticle

Fats
Cholesterol
cholesterol
sugars
Food

Contentment and tranquility: Exploring their similarities and differences

Berenbaum, H., Huang, A. B. & Flores, L. E., Jun 29 2018, (Accepted/In press) In : Journal of Positive Psychology. p. 1-8 8 p.

Research output: Contribution to journalArticle

Students
Research

Cytochrome aa 3 Oxygen Reductase Utilizes the Tunnel Observed in the Crystal Structures to Deliver O2 for Catalysis

Mahinthichaichan, P., Gennis, R. B. & Tajkhorshid, E., Apr 10 2018, In : Biochemistry. 57, 14, p. 2150-2161 12 p.

Research output: Contribution to journalArticle

Electron Transport Complex IV
Cytochromes
Catalysis
Tunnels
Oxidoreductases

Demands, responsibility, and influence in Malawi’s participatory agricultural extension services

Álvarez-Mingote, C. & McNamara, P. E., Jan 2 2018, In : Development in Practice. 28, 1, p. 81-94 14 p.

Research output: Contribution to journalArticle

agricultural extension
responsibility
farmer
service provision
governance

Deregulation of RNA metabolism in microsatellite expansion diseases

Misra, C., Lin, F. & Kalsotra, A., Jan 1 2018, Advances in Neurobiology. Springer New York LLC, p. 213-238 26 p. (Advances in Neurobiology; vol. 20).

Research output: Chapter in Book/Report/Conference proceedingChapter

Deregulation
Metabolism
Microsatellite Repeats
Trinucleotide Repeat Expansion
RNA

Design, Synthesis, and Characterization of Globular Orphan Nuclear Receptor Regulator with Biological Activity in Soft Tissue Sarcoma

Ye, M., Misra, S. K., De, A. K., Ostadhossein, F., Singh, K., Rund, L., Schook, L. & Pan, D., Dec 13 2018, In : Journal of Medicinal Chemistry. 61, 23, p. 10739-10752 14 p.

Research output: Contribution to journalArticle

Orphan Nuclear Receptors
Retinoid X Receptors
Sarcoma
Rodentia
Genetic Heterogeneity

Determinants of fluid intelligence in healthy aging: Omega-3 polyunsaturated fatty acid status and frontoparietal cortex structure

Zamroziewicz, M. K., Paul, E. J., Zwilling, C. E. & Barbey, A. K., Sep 14 2018, In : Nutritional Neuroscience. 21, 8, p. 570-579 10 p.

Research output: Contribution to journalArticle

Omega-3 Fatty Acids
Unsaturated Fatty Acids
Intelligence
Parietal Lobe
alpha-Linolenic Acid

Development and assessment of stressful life events subscales – A preliminary analysis

the STRONG Kids Research Team, Jan 15 2018, In : Journal of Affective Disorders. 226, p. 178-187 10 p.

Research output: Contribution to journalArticle

Social Support
Anxiety
Depression
Health
Chi-Square Distribution
Appetite Regulation
Systems Theory
system theory
self-regulation
well-being
Post-Traumatic Stress Disorders
Diagnostic and Statistical Manual of Mental Disorders
Wounds and Injuries
Fear
Meta-Analysis

Dietary bovine Lactoferrin reduces Staphylococcus aureus in the tissues and modulates the immune response in piglets systemically infected with S. aureus

Reznikov, E. A., Comstock, S. S., Hoeflinger, J. L., Wang, M., Miller, M. J. & Donovan, S. M., Apr 1 2018, In : Current Developments in Nutrition. 2, 4, nzy001.

Research output: Contribution to journalArticle

Lactoferrin
lactoferrin
Bifidobacterium longum subsp. infantis
Staphylococcus aureus
piglets

Dietary sialyllactose does not influence measures of recognition memory or diurnal activity in the young pig

Fleming, S. A., Chichlowski, M., Berg, B. M., Donovan, S. M. & Dilger, R. N., Apr 2018, In : Nutrients. 10, 4, 395.

Research output: Contribution to journalArticle

diurnal activity
Swine
sialic acids
N-Acetylneuraminic Acid
swine

Direct Analysis of Pathogenic Structures Affixed to the Tympanic Membrane during Chronic Otitis Media

Monroy, G. L., Hong, W., Khampang, P., Porter, R. G., Novak, M. A., Spillman, D. R., Barkalifa, R., Chaney, E. J., Kerschner, J. E. & Boppart, S. A., Jul 1 2018, In : Otolaryngology - Head and Neck Surgery (United States). 159, 1, p. 117-126 10 p.

Research output: Contribution to journalArticle

Tympanic Membrane
Optical Coherence Tomography
Otitis Media
Biofilms
Lasers

Direct protein-lipid interactions shape the conformational landscape of secondary transporters

Martens, C., Shekhar, M., Borysik, A. J., Lau, A. M., Reading, E., Tajkhorshid, E., Booth, P. J. & Politis, A., Dec 1 2018, In : Nature communications. 9, 1, 4151.

Research output: Contribution to journalArticle

transporter
lipids
proteins
Lipids
Switches

Disintegration of simulated drinking water biofilms with arrays of microchannel plasma jets

Sun, P. P., Araud, E. M., Huang, C., Shen, Y., Monroy, G. L., Zhong, S., Tong, Z., Boppart, S. A., Eden, J. G. & Nguyen, T. H., Dec 1 2018, In : npj Biofilms and Microbiomes. 4, 1, 24.

Research output: Contribution to journalArticle

Biofilms
Drinking Water
Groundwater
Optical Coherence Tomography
Confocal Microscopy

Diverse evolutionary origins and mechanisms of lens regeneration

Henry, J. J. & Hamilton, P. W., Jan 1 2018, In : Molecular biology and evolution. 35, 7, p. 1563-1575 13 p.

Research output: Contribution to journalReview article

Lens
Lenses
Regeneration
regeneration
vertebrate

Divorcing marriage and the state post-Obergefell

Wilson, R. F., Mar 2018, The Contested Place of Religion in Family Law. Wilson, R. F. (ed.). New York: Cambridge University Press, p. 413-445 16

Research output: Chapter in Book/Report/Conference proceedingChapter

Double dissociation of structure-function relationships in memory and fluid intelligence observed with magnetic resonance elastography

Johnson, C. L., Schwarb, H., Horecka, K. M., McGarry, M. D. J., Hillman, C. H., Kramer, A. F., Cohen, N. J. & Barbey, A. K., May 1 2018, In : NeuroImage. 171, p. 99-106 8 p.

Research output: Contribution to journalArticle

Elasticity Imaging Techniques
Intelligence
Hippocampus
Prefrontal Cortex
Cognition

Drug-Drug Interactions between Atorvastatin and Dronedarone Mediated by Monomeric CYP3A4

Denisov, I. G., Baylon, J. L., Grinkova, Y. V., Tajkhorshid, E. & Sligar, S. G., Feb 6 2018, In : Biochemistry. 57, 5, p. 805-816 12 p.

Research output: Contribution to journalArticle

Drug interactions
Cytochrome P-450 CYP3A
Drug Interactions
Lactones
Pharmaceutical Preparations

Economical and compact briefcase spectral-domain optical coherence tomography system for primary care and point-of-care applications

Dsouza, R., Won, J., Monroy, G. L., Spillman, D. R. & Boppart, S. A., Sep 1 2018, In : Journal of biomedical optics. 23, 9, 096003.

Research output: Contribution to journalArticle

Optical tomography
tomography
Costs
hardware
Hardware

Ectomesoderm and epithelial–mesenchymal transition-related genes in spiralian development

Osborne, C. C., Perry, K. J., Shankland, M. & Henry, J. J., Oct 2018, In : Developmental Dynamics. 247, 10, p. 1097-1120 24 p.

Research output: Contribution to journalArticle

Mollusca
Gene Regulatory Networks
Genes
Platyhelminths
Gastrula

Editorial: Building strategies for porcine cancer models

Collares, T., Seixas, F. K., Rund, L. A. & Schook, L. B., Oct 2 2018, In : Frontiers in Genetics. 9, OCT, 377.

Research output: Contribution to journalReview article

Swine
Neoplasms

Effect of divalent ions and a polyphosphate on composition, structure, and stiffness of simulated drinking water biofilms

Shen, Y., Huang, P. C., Huang, C., Sun, P., Monroy, G. L., Wu, W., Lin, J., Espinosa-Marzal, R. M., Boppart, S. A., Liu, W. T. & Nguyen, T. H., Dec 1 2018, In : npj Biofilms and Microbiomes. 4, 1, 15.

Research output: Contribution to journalArticle

Polyphosphates
Biofilms
Drinking Water
Ions
Water

Effects of endurance exercise training on inflammatory circulating progenitor cell content in lean and obese adults

Niemiro, G. M., Allen, J. M., Mailing, L. J., Khan, N. A., Holscher, H. D., Woods, J. A. & De Lisio, M., Jul 15 2018, In : Journal of Physiology. 596, 14, p. 2811-2822 12 p.

Research output: Contribution to journalArticle

Stem Cells
Exercise
Body Mass Index
Inflammation
Adipose Tissue

Electrostatic lock in the transport cycle of the multidrug resistance transporter EmrE

Vermaas, J. V., Rempe, S. B. & Tajkhorshid, E., Aug 7 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 32, p. E7502-E7511

Research output: Contribution to journalArticle

Multiple Drug Resistance
Static Electricity
Glutamic Acid
Protons
Hydrogen

Endocannabinoid Virodhamine Is an Endogenous Inhibitor of Human Cardiovascular CYP2J2 Epoxygenase

Carnevale, L. N., Arango, A. S., Arnold, W. R., Tajkhorshid, E. & Das, A., Nov 20 2018, In : Biochemistry. 57, 46, p. 6489-6499 11 p.

Research output: Contribution to journalArticle

Endocannabinoids
Anti-Inflammatory Agents
Arachidonic Acid
Cannabinoids
Cytochrome P-450 Enzyme System

Erratum: Correction: Impaired Mitochondrial Energy Production Causes Light-Induced Photoreceptor Degeneration Independent of Oxidative Stress (PLoS biology (2015) 13 7 (e1002197))

Jaiswal, M., Haelterman, N. A., Sandoval, H., Xiong, B., Donti, T., Kalsotra, A., Yamamoto, S., Cooper, T. A., Graham, B. H. & Bellen, H. J., Mar 1 2018, In : PLoS biology. 16, 3, p. e1002622

Research output: Contribution to journalComment/debate

Open Access
Oxidative stress
photoreceptors
Oxidative Stress
oxidative stress
Light
Hand
Research
Stimulus
Vignettes
Research Methods

Evaluating Detectors on Optimal Attack Vectors That Enable Electricity Theft and der Fraud

Krishna, V. B., Gunter, C. & Sanders, W. H., Aug 2018, In : IEEE Journal on Selected Topics in Signal Processing. 12, 4, p. 790-805 16 p., 8355252.

Research output: Contribution to journalArticle

Electricity
Detectors
Energy resources
Advanced metering infrastructures
Smart meters

Evaluation of risk of cholera after a natural disaster: Lessons learned from the 2015 Nepal earthquake

Khan, R., Nguyen, T. H., Shisler, J. L., Lin, L. S., Jutla, A. & Colwell, R., Aug 1 2018, In : Journal of Water Resources Planning and Management. 144, 8, 04018044.

Research output: Contribution to journalArticle

cholera
natural disaster
Nepal
Sanitation
Disasters

Evaluation of sialyllactose supplementation of a prebiotic-containing formula on growth, intestinal development, and bacterial colonization in the neonatal piglet

Siegel, M. H., Wang, M., Pan, X., Li, Q., Richards, J. D., Chichlowski, M., Berg, B. M., Dilger, R. N. & Donovan, S. M., Jan 1 2018, In : Current Developments in Nutrition. 2, 11, nzy067.

Research output: Contribution to journalArticle

Open Access
bacterial colonization
Prebiotics
blood chemistry
prebiotics
breast milk

Examining Mechanisms Underlying Fear-Control in the Extended Parallel Process Model

Quick, B. L., LaVoie, N. R., Reynolds-Tylus, T., Martinez-Gonzalez, A. & Skurka, C., Apr 3 2018, In : Health communication. 33, 4, p. 379-391 13 p.

Research output: Contribution to journalArticle

reactance
Noise-Induced Hearing Loss
Fear
Audition
Acoustic noise

Exercise Alters Gut Microbiota Composition and Function in Lean and Obese Humans

Allen, J. M., Mailing, L. J., Niemiro, G. M., Moore, R., Cook, M. D., White, B. A., Holscher, H. D. & Woods, J. A., Apr 1 2018, In : Medicine and Science in Sports and Exercise. 50, 4, p. 747-757 11 p.

Research output: Contribution to journalArticle

Exercise
Volatile Fatty Acids
Microbiota
Gastrointestinal Microbiome
Obesity