College of Liberal Arts and Sciences

Research Output 1956 2022

Filter
Letter
2019
Open Access
subjectivity
Diet
Pacific Northwest Coast
Subjectivity

Increasing Diversity in Evolutionary Anthropological Sciences—the IDEAS Program

Malhi, R. S., Antón, S. C. & Fuentes, A., May 2019, In : American Anthropologist. 121, 2, p. 478-479 2 p.

Research output: Contribution to journalLetter

Open Access
science
Evolutionary

Measuring transcription at a single gene copy reveals hidden drivers of bacterial individuality

Wang, M., Zhang, J., Xu, H. & Golding, I., Jan 1 2019, (Accepted/In press) In : Nature Microbiology.

Research output: Contribution to journalLetter

Individuality
Genes
Messenger RNA
cdc Genes
RNA Stability

Misunderstood parameter of NCBI BLAST impacts the correctness of bioinformatics workflows

Shah, N., Nute, M. G., Warnow, T. & Pop, M., May 1 2019, In : Bioinformatics. 35, 9, p. 1613-1614 2 p.

Research output: Contribution to journalLetter

Workflow
Bioinformatics
Computational Biology
Work Flow
Correctness

Multivariate ordinal probit analysis in the skeletal assessment of sex

Konigsberg, L. W. & Frankenberg, S. R., Jun 2019, In : American journal of physical anthropology. 169, 2, p. 385-387 3 p.

Research output: Contribution to journalLetter

Phenotyping photosynthesis on the limit - a critical examination of RACiR

Taylor, S. H. & Long, S. P., Jan 1 2019, In : The New phytologist. 221, 2, p. 621-624 4 p.

Research output: Contribution to journalLetter

Open Access
Ribulose-Bisphosphate Carboxylase
Photosynthesis
ribulose-bisphosphate carboxylase
global change
photosynthesis

Reply to: Brazilian ethanol expansion subject to limitations

Jaiswal, D., De Souza, A. P., Larsen, S., LeBauer, D. S., Miguez, F. E., Sparovek, G., Bollero, G. A., Buckeridge, M. S. & Long, S. P., Mar 1 2019, In : Nature Climate Change. 9, 3, p. 211-212 2 p.

Research output: Contribution to journalLetter

ethanol

Reply to: fMRI replicability depends upon sufficient individual-level data

Turner, B. O., Santander, T., Paul, E. J., Barbey, A. K. & Miller, M. B., Dec 1 2019, In : Communications Biology. 2, 1, 129.

Research output: Contribution to journalLetter

Open Access
Magnetic Resonance Imaging
Isotopes
pluton
Minerals
isotopes
isotope

Serotonin transporter–ibogaine complexes illuminate mechanisms of inhibition and transport

Coleman, J. A., Yang, D., Zhao, Z., Wen, P. C., Yoshioka, C., Tajkhorshid, E. & Gouaux, E., Jan 1 2019, In : Nature.

Research output: Contribution to journalLetter

Ibogaine
Serotonin Plasma Membrane Transport Proteins
Plasma Membrane Neurotransmitter Transport Proteins
Serotonin
Neurotransmitter Agents

Small-molecule ion channels increase host defences in cystic fibrosis airway epithelia

Muraglia, K. A., Chorghade, R. S., Kim, B. R., Tang, X. X., Shah, V. S., Grillo, A. S., Daniels, P. N., Cioffi, A. G., Karp, P. H., Zhu, L., Welsh, M. J. & Burke, M. D., Mar 21 2019, In : Nature. 567, 7748, p. 405-408 4 p.

Research output: Contribution to journalLetter

Cystic Fibrosis Transmembrane Conductance Regulator
Ion Channels
Cystic Fibrosis
Amphotericin B
Epithelium

Suicide mortality and natural environments – Authors' reply

Helbich, M., de Beurs, D., Kwan, M-P., O'Connor, R. C. & Groenewegen, P. P., Jan 2019, In : The Lancet Planetary Health. 3, 1, p. e16

Research output: Contribution to journalLetter

Suicide
suicide
mortality
Mortality
2018

A giant protocluster of galaxies at redshift 5.7

Jiang, L., Wu, J., Bian, F., Chiang, Y. K., Ho, L. C., Shen, Y., Zheng, Z. Y., Bailey, J. I., Blanc, G. A., Crane, J. D., Fan, X., Mateo, M., Olszewski, E. W., Oyarzún, G. A., Wang, R. & Wu, X. B., Dec 1 2018, In : Nature Astronomy. 2, 12, p. 962-966 5 p.

Research output: Contribution to journalLetter

galaxies
universe
sky
emitters
x rays

Ancient herders enriched and restructured African grasslands

Marshall, F., Reid, R. E. B., Goldstein, S., Storozum, M., Wreschnig, A., Hu, L., Kiura, P., Shahack-Gross, R. & Ambrose, S. H., Sep 20 2018, In : Nature. 561, 7723, p. 387-390 4 p.

Research output: Contribution to journalLetter

Soil
Food
Ecosystem
Isoptera
Livestock

Arrival routes of first Americans uncertain

Potter, B. A., Beaudoin, A. B., Haynes, C. V., Holliday, V. T., Holmes, C. E., Ives, J. W., Kelly, R., Llamas, B., Malhi, R. S., Miller, S., Reich, D., Reuther, J. D., Schiffels, S. & Surovell, T., Mar 16 2018, In : Science. 359, 6381, p. 1224-1225 2 p.

Research output: Contribution to journalLetter

Cooperative asymmetric reactions combining photocatalysis and enzymatic catalysis

Litman, Z. C., Wang, Y., Zhao, H. & Hartwig, J. F., Aug 16 2018, In : Nature. 560, 7718, p. 355-359 5 p.

Research output: Contribution to journalLetter

Alkenes
Catalysis
Regeneration
Stereoisomerism
Enzymes

Cytochrome b5 enhances androgen synthesis by rapidly reducing the CYP17A1 oxy-complex in the lyase step

Duggal, R., Denisov, I. G. & Sligar, S., Jul 2018, In : FEBS Letters. 592, 13, p. 2282-2288 7 p.

Research output: Contribution to journalLetter

Cytochromes b5
Lyases
Cytochrome P-450 Enzyme System
Androgens
NADPH-Ferrihemoprotein Reductase

KBase: The United States department of energy systems biology knowledgebase

Arkin, A. P., Cottingham, R. W., Henry, C. S., Harris, N. L., Stevens, R. L., Maslov, S., Dehal, P., Ware, D., Perez, F., Canon, S., Sneddon, M. W., Henderson, M. L., Riehl, W. J., Murphy-Olson, D., Chan, S. Y., Kamimura, R. T., Kumari, S., Drake, M. M., Brettin, T. S., Glass, E. M. & 61 others, Chivian, D., Gunter, D., Weston, D. J., Allen, B. H., Baumohl, J., Best, A. A., Bowen, B., Brenner, S. E., Bun, C. C., Chandonia, J. M., Chia, J. M., Colasanti, R., Conrad, N., Davis, J. J., Davison, B. H., Dejongh, M., Devoid, S., Dietrich, E., Dubchak, I., Edirisinghe, J. N., Fang, G., Faria, J. P., Frybarger, P. M., Gerlach, W., Gerstein, M., Greiner, A., Gurtowski, J., Haun, H. L., He, F., Jain, R., Joachimiak, M. P., Keegan, K. P., Kondo, S., Kumar, V., Land, M. L., Meyer, F., Mills, M., Novichkov, P. S., Oh, T., Olsen, G. J., Olson, R., Parrello, B., Pasternak, S., Pearson, E., Poon, S. S., Price, G. A., Ramakrishnan, S., Ranjan, P., Ronald, P. C., Schatz, M. C., Seaver, S. M. D., Shukla, M., Sutormin, R. A., Syed, M. H., Thomason, J., Tintle, N. L., Wang, D., Xia, F., Yoo, H., Yoo, S. & Yu, D., Jul 6 2018, In : Nature Biotechnology. 36, 7, p. 566-569 4 p.

Research output: Contribution to journalLetter

Database Management Systems
Systems Biology
Knowledge Bases
Computational Biology
forward modeling
hydrology
stakeholder
adaptive management
prediction

Pressure- and heat-induced protein unfolding in bacterial cells: crowding vs. sticking

Chen, T., Dave, K. & Gruebele, M. H. W., Apr 2018, In : FEBS Letters. 592, 8, p. 1357-1365 9 p.

Research output: Contribution to journalLetter

Protein Unfolding
Denaturation
Phosphoglycerate Kinase
Hot Temperature
Escherichia coli

Translucent windows: how uncertainty in competitive interactions impacts detection of community pattern

D'Andrea, R., Ostling, A. & O'Dwyer, J. P., Jun 2018, In : Ecology Letters. 21, 6, p. 826-835 10 p.

Research output: Contribution to journalLetter

niche
niches
uncertainty
interspecific competition
natural history

Widespread seasonal compensation effects of spring warming on northern plant productivity

Buermann, W., Forkel, M., O’Sullivan, M., Sitch, S., Friedlingstein, P., Haverd, V., Jain, A. K., Kato, E., Kautz, M., Lienert, S., Lombardozzi, D., Nabel, J. E. M. S., Tian, H., Wiltshire, A. J., Zhu, D., Smith, W. K. & Richardson, A. D., Oct 4 2018, In : Nature. 562, 7725, p. 110-114 5 p.

Research output: Contribution to journalLetter

Ecosystem
Hot Springs
Carbon Cycle
Climate Change
Climate
2017

Is the Accuracy of Density Functional Theory for Atomization Energies and Densities in Bonding Regions Correlated?

Brorsen, K. R., Yang, Y., Pak, M. V. & Hammes-Schiffer, S., May 4 2017, In : Journal of Physical Chemistry Letters. 8, 9, p. 2076-2081 6 p.

Research output: Contribution to journalLetter

atomizing
Atomization
functionals
Density functional theory
Carrier concentration

New combinations in Lomatium (Apiaceae, subfamily apioideae)

Feist, M. A. E., Smith, J. F., Mansfield, D. H., Darrach, M., McNeill, R. P., Downie, S. R., Plunkett, G. M. & Wilson, B. L., Aug 1 2017, In : Phytotaxa. 316, 1, p. 95-98 4 p.

Research output: Contribution to journalLetter

Lomatium
Apiaceae
floristics
new combination
phylogenetics

Parallel folding pathways of Fip35 WW domain explained by infrared spectra and their computer simulation

Zanetti-Polzi, L., Davis, C. M., Gruebele, M., Dyer, R. B., Amadei, A. & Daidone, I., Oct 2017, In : FEBS Letters. 591, 20, p. 3265-3275 11 p.

Research output: Contribution to journalLetter

Amides
Computer Simulation
Infrared radiation
Computer simulation
Molecular Dynamics Simulation

Pertinent issue, flawed methods

Ramprasad, V., Ribot, J. C. & Chhatre, A., Dec 9 2017, In : Economic and Political Weekly. 52, 49, p. 4-5 2 p.

Research output: Contribution to journalLetter

RNA-editing enzymes ADAR1 and ADAR2 coordinately regulate the editing and expression of Ctn RNA

Anantharaman, A., Gholamalamdari, O., Khan, A., Yoon, J. H., Jantsch, M. F., Hartner, J. C., Gorospe, M., Prasanth, S. G. & Kannanganattu, P. K., Sep 2017, In : FEBS Letters. 591, 18, p. 2890-2904 15 p.

Research output: Contribution to journalLetter

RNA Editing
Nuclear RNA
RNA
Adenosine Deaminase
Enzymes

Silica particles contribute to the procoagulant activity of DNA and polyphosphate isolated using commercial kits

Smith, S. A., Baker, C. J., Gajsiewicz, J. M. & Morrissey, J. H., Jul 6 2017, In : Blood. 130, 1, p. 88-91 4 p.

Research output: Contribution to journalLetter

2016

3D implementation of the symbol nomenclature for graphical representation of glycans

Thieker, D. F., Hadden, J. A., Schulten, K. J. & Woods, R. J., Aug 1 2016, In : Glycobiology. 26, 8, p. 786-787 2 p.

Research output: Contribution to journalLetter

An ectomycorrhizal nitrogen economy facilitates monodominance in a neotropical forest

Corrales, A., Mangan, S. A., Turner, B. L. & Dalling, J. W., Apr 1 2016, In : Ecology Letters. 19, 4, p. 383-392 10 p.

Research output: Contribution to journalLetter

tropical forests
nitrogen
tropical forest
soil
nitrates

Long noncoding RNA MALAT1-derived mascRNA is involved in cardiovascular innate immunity

Gast, M., Schroen, B., Voigt, A., Haas, J., Kuehl, U., Lassner, D., Skurk, C., Escher, F., Wang, X., Kratzer, A., Michalik, K., Papageorgiou, A., Peters, T., Loebel, M., Wilk, S., Althof, N., Prasanth, K. V., Katus, H., Meder, B., Nakagawa, S. & 6 others, Scheibenbogen, C., Schultheiss, H. P., Landmesser, U., Dimmeler, S., Heymans, S. & Poller, W., Apr 1 2016, In : Journal of Molecular Cell Biology. 8, 2, p. 178-181 4 p.

Research output: Contribution to journalLetter

Open- Access policies: A legal quagmire

Kapovich, I., Aug 19 2016, In : Science. 353, 6301, p. 758-759 2 p.

Research output: Contribution to journalLetter

Reported violations of rationalitymay be aggregation artifacts

Davis-Stober, C. P., Park, S., Brown, N. & Regenwetter, M., Aug 16 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 33, p. E4761-E4763

Research output: Contribution to journalLetter

2015

Anthropological Genetics

Kitchen, A., Non, A. L., Gravlee, C. C., Mulligan, C. J., Warinner, C., Lewis, C. M., Bankoff, R. J., Randrianatoandro, H. D. D., Perry, G. H., Malhi, R. S., Bader, A. C. & Raff, J., Dec 1 2015, In : American Anthropologist. 117, 4, p. 736-737 2 p.

Research output: Contribution to journalLetter

Association of the rs2242446 polymorphism in the norepinephrine transporter gene SLC6A2 and anxious arousal symptoms of posttraumatic stress disorder

Pietrzak, R. H., Sumner, J. A., Aiello, A. E., Uddin, M., Neumeister, A., Guffanti, G. & Koenen, K. C., Apr 1 2015, In : Journal of Clinical Psychiatry. 76, 4, p. e537-e538

Research output: Contribution to journalLetter

Polymorphism
Arousal
Gene
African Americans
Anxiety

Engaging Native Americans in Genomics Research

Malhi, R. S. & Bader, A. C., Dec 1 2015, In : American Anthropologist. 117, 4, p. 743-744 2 p.

Research output: Contribution to journalLetter

Native Americans

Ralph T. Fisher, 1920-2015

Hitchins, K., Jan 1 2015, In : Slavic Review. 74, 04, p. 976-977

Research output: Contribution to journalLetter

Relocation risky for bumblebee colonies

Lozier, J. D., Cameron, S. A., Duennes, M. A., Strange, J. P., Williams, P. H., Goulson, D., Brown, M. J. F., Morales, C. & Jepsen, S., Oct 16 2015, In : Science. 350, 6258, p. 286-287 2 p.

Research output: Contribution to journalLetter

Reply to Betsch et al. Highlighting risks of diseases shifts vaccine attitudes

Horne, Z., Powell, D., Hummel, J. E. & Holyoak, K. J., Dec 8 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 49, p. E6727

Research output: Contribution to journalLetter

Health Knowledge, Attitudes, Practice
Immunization Programs
Vaccination
Vaccines

Reply to "Comments on 'Describing the shape of raindrop size distributions using uncorrelated raindrop mass spectrum parameters'"

Williams, C. R., Bringi, V. N., Carey, L. D., Chandrasekar, V., Gatlin, P. N., Haddad, Z. S., Meneghini, R., Joseph Munchak, S., Nesbitt, S., Petersen, W. A., Tanelli, S., Tokay, A., Wilson, A. & Wolff, D. B., Jan 1 2015, In : Journal of Applied Meteorology and Climatology. 54, 9, p. 1977-1982 6 p.

Research output: Contribution to journalLetter

raindrop
rainfall
parameter

Scrutinizing evidence of no dilatancy upon stick-slip of confined fluids

Jee, A. Y., Lou, K. & Granick, S., Sep 8 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 36, p. E4972

Research output: Contribution to journalLetter

Second letter to editor in response to author response published in J. Air Waste Manage. Assoc. 64: 1218–1220

Gurney, K. R., Huang, J., Coltin, K. & Li, B., Jan 1 2015, In : Journal of the Air and Waste Management Association. 65, 3, p. 245-246 2 p.

Research output: Contribution to journalLetter

Power Plants
Air Pollutants
Coal
Environmental Monitoring
environmental monitoring

The rs1049353 polymorphism in the CNR1 gene interacts with childhood abuse to predict posttraumatic threat symptoms

Mota, N., Sumner, J. A., Lowe, S. R., Neumeister, A., Uddin, E. M., Aiello, A. E., Wildman, D., Galea, S., Koenen, K. C. & Pietrzak, R. H., Dec 2015, In : Journal of Clinical Psychiatry. 76, 12, p. e1622-e1623

Research output: Contribution to journalLetter

2014

Author response

Mishra, S., Verhalen, B., Stein, R. A., Wen, P. C., Tajkhorshid, E. & Mchaourab, H. S., May 16 2014, In : eLife. 2014, 3, e02740.

Research output: Contribution to journalLetter

Early Americans: Misstated results

Kennett, D. J., Asmerom, Y., Kemp, B. M., Polyak, V., Bolnick, D. A., Malhi, R. S. & Culleton, B. J., Jan 1 2014, In : Science. 345, 6195, 1 p.

Research output: Contribution to journalLetter

Further support for an association between the memory-related gene WWC1 and posttraumatic stress disorder: Results from the detroit neighborhood health study

Sumner, J. A., Pietrzak, R. H., Aiello, A. E., Uddin, E. M., Wildman, D., Galea, S. & Koenen, K. C., Dec 1 2014, In : Biological Psychiatry. 76, 11, p. e25-e26

Research output: Contribution to journalLetter

Intracellular Signaling Peptides and Proteins
Phosphoproteins
Genetic Predisposition to Disease
Post-Traumatic Stress Disorders
Health

Of research questions and literature reviews: A reply to Lorenz et al.

Fogelman, C. J. & Bassett, T. J., Jan 1 2014, In : Geoforum. 51, p. 256-258 3 p.

Research output: Contribution to journalLetter

climate change
risk management
continuity
social science
politics
Meteorology
Cyclonic Storms
Disasters
Population
Meteorology
Cyclonic Storms
Disasters
Names