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Molecular profiling: Gene expression reveals discrete phases of lens induction and development in Xenopus laevis

Walter, B. E., Tian, Y., Garlisch, A. K., Carinato, M. E., Elkins, M. B., Wolfe, A. D., Schaefer, J. J., Perry, K. J. & Henry, J. J., Mar 24 2004, In : Molecular Vision. 10, p. 186-198 13 p.

Research output: Contribution to journalArticle

Molecular motors one at a time: FIONA to the rescue

Kural, C., Balci, H. & Selvin, P. R., Nov 30 2005, In : Journal of Physics Condensed Matter. 17, 47, p. S3979-S3995

Research output: Contribution to journalArticle

Molecular markers for corneal epithelial cells in larval vs. adult Xenopus frogs

Sonam, S., Srnak, J. A., Perry, K. J. & Henry, J. J., Jul 2019, In : Experimental Eye Research. 184, p. 107-125 19 p.

Research output: Contribution to journalArticle

Molecular docking of substrates and inhibitors in the catalytic site of CYP6B1, an insect cytochrome P450 monooxygenase

Baudry, J., Li, W., Pan, L., Berenbaum, M. R. & Schuler, M. A., Aug 1 2003, In : Protein Engineering. 16, 8, p. 577-587 11 p.

Research output: Contribution to journalArticle

Molecular definitions of fatty acid hydroxylases in Arabidopsis thaliana

Rupasinghe, S. G., Duan, H. & Schuler, M. A., Jul 1 2007, In : Proteins: Structure, Function and Genetics. 68, 1, p. 279-293 15 p.

Research output: Contribution to journalArticle

Molecular comparison of monocot and dicot U1 and U2 snRNAs

Musci, M. A., Egeland, D. B. & Schuler, M. A., Jul 1992, In : The Plant Journal. 2, 4, p. 589-599 11 p.

Research output: Contribution to journalArticle

Molecular characterization of CYP73A9 and CYP82A1 P450 genes involved in plant defense in pea

Whitbred, J. M. & Schuler, M. A., Jan 1 2000, In : Plant physiology. 124, 1, p. 47-58 12 p.

Research output: Contribution to journalArticle

Molecular chaperone-mediated nuclear protein dynamics

Echtenkamp, F. J. & Freeman, B. C., Jan 1 2014, In : Current Protein and Peptide Science. 15, 3, p. 216-224 9 p.

Research output: Contribution to journalArticle

Molecular analysis of multiple CYP6B genes from polyphagous Papilio species

Li, W., Berenbaum, M. R. & Schuler, M. A., Sep 6 2001, In : Insect Biochemistry and Molecular Biology. 31, 10, p. 999-1011 13 p.

Research output: Contribution to journalArticle

Molecular analysis of dicot and monocot small nuclear RNA populations.

Egeland, D. B., Sturtevant, A. P. & Schuler, M. A., Jun 1989, In : The Plant cell. 1, 6, p. 633-643 11 p.

Research output: Contribution to journalArticle

Molecular, phylogenetic and developmental analyses of Sall proteins in bilaterians

Lorente-Sorolla, J., Truchado-Garcia, M., Perry, K. J., Henry, J. Q. & Grande, C., Apr 10 2018, In : EvoDevo. 9, 1, 9.

Research output: Contribution to journalArticle

Modulation of histone acetylation by [4-(acetylamino)-N-(2-amino-phenyl) benzamide] in HCT-8 colon carcinoma

Kraker, A. J., Mizzen, C. A., Hartl, B. G., Miin, J., Allis, C. D. & Merriman, R. L., Apr 1 2003, In : Molecular Cancer Therapeutics. 2, 4, p. 401-408 8 p.

Research output: Contribution to journalArticle

Modified nodal integral method for the three-dimensional, time-dependent, incompressible Navier-Stokes equations

Wang, F. & Rizwan-Uddin, Jan 2005, In : Nuclear Science and Engineering. 149, 1, p. 107-114 8 p.

Research output: Contribution to journalArticle

Modifications of H3 and H4 during chromatin replication, nucleosome assembly, and histone exchange

Benson, L. J., Gu, Y., Yakovleva, T., Tong, K., Barrows, C., Strack, C. L., Cook, R. G., Mizzen, C. A. & Annunziato, A. T., Apr 7 2006, In : Journal of Biological Chemistry. 281, 14, p. 9287-9296 10 p.

Research output: Contribution to journalArticle

Mitotic chromosome structure: Reproducibility of folding and symmetry between sister chromatids

Strukov, Y. G. & Belmont, A. S., Feb 18 2009, In : Biophysical journal. 96, 4, p. 1617-1628 12 p.

Research output: Contribution to journalArticle

MIR100 host gene-encoded lncRNAs regulate cell cycle by modulating the interaction between HuR and its target mRNAs

Sun, Q., Tripathi, V., Yoon, J. H., Singh, D. K., Hao, Q., Min, K. W., Davila, S., Zealy, R. W., Li, X. L., Polycarpou-Schwarz, M., Lehrmann, E., Zhang, Y., Becker, K. G., Freier, S. M., Zhu, Y., Diederichs, S., Prasanth, S. G., Lal, A., Gorospe, M. & Prasanth, K. V., Jan 1 2018, In : Nucleic acids research. 46, 19, p. 10405-10416 12 p.

Research output: Contribution to journalArticle

Mild performic acid oxidation enhances chromatographic and top down mass spectrometric analyses of histones

Pesavento, J. J., Garcia, B. A., Streeky, J. A., Kelleher, N. L. & Mizzen, C. A., Sep 1 2007, In : Molecular and Cellular Proteomics. 6, 9, p. 1510-1526 17 p.

Research output: Contribution to journalArticle

Microtubule binding by dynactin is required for microtubule organization but not cargo transport

Kim, H., Ling, S. C., Rogers, G. C., Kural, C., Selvin, P. R., Rogers, S. L. & Gelfand, V. I., Feb 26 2007, In : Journal of Cell Biology. 176, 5, p. 641-651 11 p.

Research output: Contribution to journalArticle

MicroRNA-146b promotes myogenic differentiation and modulates multiple gene targets in muscle cells

Khanna, N., Ge, Y. & Chen, J., Jun 23 2014, In : PloS one. 9, 6, e100657.

Research output: Contribution to journalArticle

Microfluidic devices for culturing primary mammalian neurons at low densities

Millet, L. J., Stewart, M. E., Sweedler, J. V., Nuzzo, R. G. & Gillette, M. U., Jan 1 2007, In : Lab on a chip. 7, 8, p. 987-994 8 p.

Research output: Contribution to journalArticle

Methods for examining lens regeneration in xenopus

Henry, J. J., Perry, K. J. & Hamilton, P. W., Apr 2019, In : Cold Spring Harbor protocols. 2019, 4, p. 268-273 6 p.

Research output: Contribution to journalArticle

Metabolism of myristicin by Depressaria pastinacella CYP6AB3v2 and inhibition by its metabolite

Mao, W., Zangerl, A. R., Berenbaum, M. R. & Schuler, M. A., Jun 1 2008, In : Insect Biochemistry and Molecular Biology. 38, 6, p. 645-651 7 p.

Research output: Contribution to journalArticle

Melatonin signal transduction pathways require E-Box-Mediated transcription of Per1 and Per2 to reset the SCN clock at dusk

Kandalepas, P. C., Mitchell, J. W. & Gillette, M. U. G., Jun 2016, In : PloS one. 11, 6, e0157824.

Research output: Contribution to journalArticle

Melatonin directly resets the rat suprachiasmatic circadian clock in vitro

McArthur, A. J., Gillette, M. U. & Prosser, R. A., Nov 22 1991, In : Brain Research. 565, 1, p. 158-161 4 p.

Research output: Contribution to journalArticle

Melatonin desensitizes endogenous MT2 melatonin receptors in the rat suprachiasmatic nucleus: Relevance for defining the periods of sensitivity of the mammalian circadian clock to melatonin

Gerdin, M. J., Masana, M. I., Rivera-Bermúdez, M. A., Hudson, R. L., Earnest, D. J., Gillette, M. U. & Dubocovich, M. L., Nov 1 2004, In : FASEB Journal. 18, 14, p. 1646-1656 11 p.

Research output: Contribution to journalArticle

Melatonin action and signal transduction in the rat suprachiasmatic circadian clock: Activation of protein kinase C at dusk and dawn

Mcarthur, A. J., Hunt, A. E. & Gillette, M. U., Jan 1 1997, In : Endocrinology. 138, 2, p. 627-634 8 p.

Research output: Contribution to journalArticle

Mediation of pyrethroid insecticide toxicity to honey bees (Hymenoptera: Apidae) by cytochrome P450 monooxygenases

Johnson, R. M., Wen, Z., Schuler, M. A. & Berenbaum, M. R., Aug 2006, In : Journal of economic entomology. 99, 4, p. 1046-1050 5 p.

Research output: Contribution to journalArticle

Mechanistic target of rapamycin controls homeostasis of adipogenesis

Yoon, M. S., Zhang, C., Sun, Y., Schoenherr, C. J. & Chen, J., Aug 1 2013, In : Journal of Lipid Research. 54, 8, p. 2166-2173 8 p.

Research output: Contribution to journalArticle

Mechanism of Long-Range Chromosome Motion Triggered by Gene Activation

Wang, A., Kolhe, J. A., Gioacchini, N., Baade, I., Brieher, W. M., Peterson, C. L. & Freeman, B. C., Feb 10 2020, In : Developmental cell. 52, 3, p. 309-320.e5

Research output: Contribution to journalArticle

Mechanical force affects expression of an in vitro metastasis-like phenotype in HCT-8 cells

Tang, X., Kuhlenschmidt, T. B., Zhou, J., Bell, P., Wang, F., Kuhlenschmidt, M. S. & Saif, T. A., Oct 20 2010, In : Biophysical journal. 99, 8, p. 2460-2469 10 p.

Research output: Contribution to journalArticle

Maximum likelihood estimation of molecular motor kinetics from staircase dwell-time sequences

Milescu, L. S., Yildiz, A., Selvin, P. R. & Sachs, F., Jan 1 2006, In : Biophysical journal. 91, 4, p. 1156-1168 13 p.

Research output: Contribution to journalArticle

Material properties of the cell dictate stress-induced spreading and differentiation in embryonic stemcells

Chowdhury, F., Na, S., Li, D., Poh, Y. C., Tanaka, T. S., Wang, F. & Wang, N., Jan 2010, In : Nature Materials. 9, 1, p. 82-88 7 p.

Research output: Contribution to journalArticle

Mass spectrometry-based discovery of circadian peptides

Hatcher, N. G., Atkins, N., Annangudi, S. P., Forbes, A. J., Kelleher, N. L., Gillette, M. U. & Sweedler, J. V., Aug 26 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 34, p. 12527-12532 6 p.

Research output: Contribution to journalArticle

Mass spectrometric characterization of human histone H3: A bird's eye view

Thomas, C. E., Kelleher, N. L. & Mizzen, C. A., Feb 1 2006, In : Journal of Proteome Research. 5, 2, p. 240-247 8 p.

Research output: Contribution to journalArticle

Mapping 3D genome organization relative to nuclear compartments using TSA-Seq as a cytological ruler

Chen, Y., Zhang, Y., Wang, Y., Zhang, L., Brinkman, E. K., Adam, S. A., Goldman, R., Van Steensel, B., Ma, J. & Belmont, A. S., Nov 1 2018, In : Journal of Cell Biology. 217, 11, p. 4025-4048 24 p.

Research output: Contribution to journalArticle

MAPK activation and the specification of the D quadrant in the gastropod mollusc, Crepidula fornicata

Henry, J. J. & Perry, K. J., Jan 1 2008, In : Developmental Biology. 313, 1, p. 181-195 15 p.

Research output: Contribution to journalArticle

Mammalian target of rapamycin regulates miRNA-1 and follistatin in skeletal myogenesis

Sun, Y., Ge, Y., Drnevich, J., Zhao, Y., Band, M. & Chen, J., Jun 28 2010, In : Journal of Cell Biology. 189, 7, p. 1157-1169 13 p.

Research output: Contribution to journalArticle

Mammalian target of rapamycin and Rictor control neutrophil chemotaxis by regulating Rac/Cdc42 activity and the actin cytoskeleton

He, Y., Li, D., Cook, S. L., Yoon, M. S., Kapoor, A., Rao, C. V., Kenis, P. J. A., Chen, J. & Wang, F., Nov 1 2013, In : Molecular biology of the cell. 24, 21, p. 3369-3380 12 p.

Research output: Contribution to journalArticle

Mammalian target of rapamycin (mTOR) signaling is required for a late-stage fusion process during skeletal myotube maturation

Park, I. H. & Chen, J., Sep 9 2005, In : Journal of Biological Chemistry. 280, 36, p. 32009-32017 9 p.

Research output: Contribution to journalArticle

Malat1 regulates myogenic differentiation and muscle regeneration through modulating MyoD transcriptional activity

Chen, X., He, L., Zhao, Y., Li, Y., Zhang, S., Sun, K., So, K., Chen, F., Zhou, L., Lu, L., Wang, L., Zhu, X., Bao, X., Esteban, M. A., Nakagawa, S., Prasanth, K. V., Wu, Z., Sun, H. & Wang, H., Mar 14 2017, In : Cell Discovery. 3, 17002.

Research output: Contribution to journalArticle

Malat1 is not an essential component of nuclear speckles in mice

Nakagawa, S., Ip, J. Y., Shioi, G., Tripathi, V., Zong, X., Hirose, T. & Prasanth, K. V., Aug 1 2012, In : RNA. 18, 8, p. 1487-1499 13 p.

Research output: Contribution to journalArticle

Magnetic Cytoskeleton Affinity Purification of Microtubule Motors Conjugated to Quantum Dots

Tjioe, M., Ryoo, H., Ishitsuka, Y., Ge, P., Bookwalter, C., Huynh, W., McKenney, R. J., Trybus, K. M. & Selvin, P. R., Jul 18 2018, In : Bioconjugate Chemistry. 29, 7, p. 2278-2286 9 p.

Research output: Contribution to journalArticle

Lysine deacetylases regulate the heat shock response including the age-associated impairment of HSF1

Zelin, E. & Freeman, B. C., Apr 10 2015, In : Journal of Molecular Biology. 427, 7, p. 1644-1654 11 p.

Research output: Contribution to journalArticle

Luminescence resonance energy transfer measurements in myosin

Getz, E. B., Cooke, R. & Selvin, P. R., May 1998, In : Biophysical journal. 74, 5, p. 2451-2458 8 p.

Research output: Contribution to journalArticle

Long-Range Directional Movement of an Interphase Chromosome Site

Chuang, C. H., Carpenter, A. E., Fuchsova, B., Johnson, T., de Lanerolle, P. & Belmont, A. S., Apr 18 2006, In : Current Biology. 16, 8, p. 825-831 7 p.

Research output: Contribution to journalArticle

Long Noncoding RNA PURPL Suppresses Basal p53 Levels and Promotes Tumorigenicity in Colorectal Cancer

Li, X. L., Subramanian, M., Jones, M. F., Chaudhary, R., Singh, D. K., Zong, X., Gryder, B., Sindri, S., Mo, M., Schetter, A., Wen, X., Parvathaneni, S., Kazandjian, D., Jenkins, L. M., Tang, W., Elloumi, F., Martindale, J. L., Huarte, M., Zhu, Y., Robles, A. I. & 9 others, Frier, S. M., Rigo, F., Cam, M., Ambs, S., Sharma, S., Harris, C. C., Dasso, M., Prasanth, K. V. & Lal, A., Sep 5 2017, In : Cell Reports. 20, 10, p. 2408-2423 16 p.

Research output: Contribution to journalArticle