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Tbx18 Regulates the Differentiation of Periductal Smooth Muscle Stroma and the Maintenance of Epithelial Integrity in the Prostate

Bolt, C. C., Negi, S., Guimarães-Camboa, N., Zhang, H., Troy, J. M., Lu, X., Kispert, A., Evans, S. M. & Stubbs, L., Jan 1 2016, In : PloS one. 11, 4, p. e0154413

Research output: Contribution to journalArticle

smooth muscle
Smooth Muscle
Muscle
Prostate
sinuses

Task-related differential expression of four cytochrome P450 genes in honeybee appendages

Mao, W., Schuler, M. A. & Berenbaum, M. R., Oct 1 2015, In : Insect Molecular Biology. 24, 5, p. 582-588 7 p.

Research output: Contribution to journalArticle

appendages
cytochrome P-450
Cytochrome P-450 Enzyme System
honey bees
Leg

Taranis Protects Regenerating Tissue from Fate Changes Induced by the Wound Response in Drosophila

Schuster, K. J. & Smith-Bolton, R., Jul 6 2015, In : Developmental cell. 34, 1, p. 119-128 10 p.

Research output: Contribution to journalArticle

Drosophila
Tissue
Wounds and Injuries
Regeneration
Genes
Europium
Pentetic Acid
europium
chelates
antennas
Cytochromes b5
Mutagenesis
Gene Expression
Histidine
Hemeproteins

Synchronization and phase-resetting by glutamate of an immortalized SCN cell line

Hurst, W. J., Mitchell, J. W. & Gillette, M. L., Nov 1 2002, In : Biochemical and Biophysical Research Communications. 298, 1, p. 133-143 11 p.

Research output: Contribution to journalArticle

Glutamic Acid
Synchronization
Circadian Clocks
Cells
Cell Line

Synaptopodin couples epithelial contractility to α-actinin-4-dependent junction maturation

Kannan, N. & Tang, V. W., Oct 26 2015, In : Journal of Cell Biology. 211, 2, p. 407-434 28 p.

Research output: Contribution to journalArticle

Actinin
Intercellular Junctions
Vinculin
Actins
Myosin Type II

Suprachiasmatic circadian pacemaker of rat shows two windows of sensitivity to neuropeptide Y in vitro

Medanic, M. & Gillette, M. L., Aug 27 1993, In : Brain Research. 620, 2, p. 281-286 6 p.

Research output: Contribution to journalArticle

Neuropeptide Y
In Vitro Techniques

Super-resolution imaging of synaptic and extra-synaptic AMPA receptors with Different-Sized fluorescent probes

Lee, S. H., Jin, C., Cai, E., Ge, P., Ishitsuka, Y., Teng, K. W., De Thomaz, A. A., Nall, D., Baday, M., Jeyifous, O., Demonte, D., Dundas, C. M., Park, S., Delgado, J. Y., Green, W. N. & Selvin, P. R., Jul 27 2017, In : eLife. 6, e27744.

Research output: Contribution to journalArticle

Post-Synaptic Density
Neurotransmitter Receptor
AMPA Receptors
Fluorescent Dyes
Imaging techniques
Depressaria pastinacella
Pastinaca
psoralens
substrate specificity
Substrate Specificity

Substrates of command ability in a buccal neuron of Pleurobranchaea - II. Potential role of cyclic AMP

Gillette, R., Gillette, M. U. & Davis, W. J., Dec 1 1982, In : Journal of Comparative Physiology □ A. 146, 4, p. 461-470 10 p.

Research output: Contribution to journalArticle

Pleurobranchaea
Aptitude
Cheek
cyclic AMP
Adenosine Monophosphate
Pleurobranchaea
Cheek
action potentials
Action Potentials
mechanism of action

Studies on crucibulum spinosum (sowerby)

Ulbrick, M. L., Jan 1 1969, In : Journal of Molluscan Studies. 38, 5, p. 431-438 8 p.

Research output: Contribution to journalArticle

Crucibulum
Molecular modeling
Cytochromes
cytochromes
Mixed Function Oxygenases
toxin

Structural Contributions to Hydrodynamic Diameter for Quantum Dots Optimized for Live-Cell Single-Molecule Tracking

Sheung, J. Y., Ge, P., Lim, S. J., Lee, S. H., Smith, A. M. & Selvin, P. R., Aug 2 2018, In : Journal of Physical Chemistry C. 122, 30, p. 17406-17412 7 p.

Research output: Contribution to journalArticle

Streptavidin
Semiconductor quantum dots
Hydrodynamics
hydrodynamics
quantum dots

Structural bases of dimerization of yeast telomere protein Cdc13 and its interaction with the catalytic subunit of DNA polymerase α

Sun, J., Yang, Y., Wan, K., Mao, N., Yu, T. Y., Lin, Y. C., Dezwaan, D. C., Freeman, B. C., Lin, J. J., Lue, N. F. & Lei, M., Feb 2011, In : Cell Research. 21, 2, p. 258-274 17 p.

Research output: Contribution to journalArticle

Catalytic DNA
Fungal Proteins
Telomere
Dimerization
DNA-Directed DNA Polymerase
Insect Proteins
flavone
Cytochrome P-450 Enzyme System
Pheromones
Diazinon

Structural analysis of elements contributing to 5' splice site selection in plant pre-mRNA transcripts

Egoavil, C., Marton, H. A., Baynton, C. E., McCullough, A. J. & Schuler, M. A., Jan 1 1997, In : Plant Journal. 12, 5, p. 971-980 10 p.

Research output: Contribution to journalArticle

RNA Splice Sites
RNA Precursors
introns
mutation
exons

Stoichiometry and assembly of mTOR complexes revealed by single-molecule pulldown

Jain, A., Arauz, E., Aggarwal, V., Ikon, N., Chen, J. & Ha, T., Dec 16 2014, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 50, p. 17833-17838 6 p.

Research output: Contribution to journalArticle

Sirolimus
Raptors
Dimerization
Fluorescence Microscopy
Phosphotransferases

Stimulation of yeast telomerase activity by the ever shorter telomere 3 (Est3) subunit is dependent on direct interaction with the catalytic protein Est2

Talley, J. M., DeZwaan, D. C., Maness, L. D., Freeman, B. C. & Friedman, K. L., Jul 29 2011, In : Journal of Biological Chemistry. 286, 30, p. 26431-26439 9 p.

Research output: Contribution to journalArticle

Telomerase
Telomere
Yeast
Yeasts
Proteins

Steroid receptor coactivator-1 is a histone acetyltransferase

Spencer, T. E., Jenster, G., Burcin, M. M., Allis, C. D., Zhou, J., Mizzen, C. A., McKenna, N. J., Onate, S. A., Tsai, S. Y., Tsai, M. J. & O'Malley, B. W., Oct 2 1997, In : Nature. 389, 6647, p. 194-198 5 p.

Research output: Contribution to journalArticle

Nuclear Receptor Coactivator 1
Histone Acetyltransferases
Steroid Receptors
Chromatin
Histones

Step-size is determined by neck length in myosin V

Sakamoto, T., Yildez, A., Selvin, P. R. & Sellers, J. R., Dec 13 2005, In : Biochemistry. 44, 49, p. 16203-16210 8 p.

Research output: Contribution to journalArticle

Myosin Type V
Neck
Actins
Actin Cytoskeleton
Calmodulin

Stable small quantum dots for synaptic receptor tracking on live neurons

Cai, E., Ge, P., Lee, S. H., Jeyifous, O., Wang, Y., Liu, Y., Wilson, K. M., Lim, S. J., Baird, M. A., Stone, J. E., Lee, K. Y., Davidson, M. W., Chung, H. J., Schulten, K., Smith, A. M., Green, W. N. & Selvin, P. R., Nov 10 2014, In : Angewandte Chemie - International Edition. 53, 46, p. 12484-12488 5 p.

Research output: Contribution to journalArticle

Neurotransmitter Receptor
Semiconductor quantum dots
Neurons
AMPA Receptors
Functional groups

Stable and reproducible transgene expression independent of proliferative or differentiated state using BAC TG-EMBED

Chaturvedi, P., Zhao, B., Zimmerman, D. L. & Belmont, A. S., Aug 1 2018, In : Gene therapy. 25, 5, p. 376-391 16 p.

Research output: Contribution to journalArticle

Transgenes
Cell Differentiation
Chromosomes
NIH 3T3 Cells
Biotechnology

SRSF1 regulates the assembly of pre-mRNA processing factors in nuclear speckles

Tripathi, V., Song, D. Y., Zong, X., Shevtsov, S. P., Hearn, S., Fu, X. D., Dundr, M. & Prasanth, K. V., Sep 15 2012, In : Molecular biology of the cell. 23, 18, p. 3694-3706 13 p.

Research output: Contribution to journalArticle

RNA Precursors
Interphase
Cell Nucleus
RNA
Gene Expression

Splicing-independent recruitment of spliceosomal small nuclear RNPs to nascent RNA polymerase II transcripts

Patel, S. B., Novikova, N. & Bellini, M., Sep 10 2007, In : Journal of Cell Biology. 178, 6, p. 937-949 13 p.

Research output: Contribution to journalArticle

Small Nuclear Ribonucleoproteins
RNA Polymerase II
Oocytes
Spliceosomes
Small Nuclear RNA

Spiralian model systems

Henry, J. Q., Jan 1 2014, In : International Journal of Developmental Biology. 58, 6-8, p. 389-401 13 p.

Research output: Contribution to journalArticle

Ecology
Molecular Biology
Life History Traits

Spiralian gastrulation: Germ layer formation, morphogenesis, and fate of the blastopore in the slipper snail Crepidula fornicata

Lyons, D. C., Perry, K. J. & Henry, J. J., Jun 24 2015, In : EvoDevo. 6, 1, 24.

Research output: Contribution to journalArticle

Gastrula
Germ Layers
Gastrulation
morphogenesis
Snails

Spatiotemporal organization, regulation, and functions of tractions during neutrophil chemotaxis

Shin, M. E., He, Y., Li, D., Na, S., Chowdhury, F., Poh, Y. C., Collin, O., Su, P., De Lanerolle, P., Schwartz, M. A., Wang, N. & Wang, F., Oct 28 2010, In : Blood. 116, 17, p. 3297-3310 14 p.

Research output: Contribution to journalArticle

Myosin Type II
Traction
Chemotaxis
Neutrophils
Nonmuscle Myosin Type IIA

Spatial light interference tomography (SLIT)

Wang, Z., Marks, D. L., Carney, P. S., Millet, L. J., Gillette, M. U., Mihi, A., Braun, P. V., Shen, Z., Prasanth, S. G. & Popescu, G., Oct 10 2011, In : Optics Express. 19, 21, p. 19907-19918 12 p.

Research output: Contribution to journalArticle

tomography
refractivity
interference
numerical aperture
Born approximation

Spatial light interference microscopy (SLIM)

Wang, Z., Millet, L., Mir, M., Ding, H., Unarunotai, S., Rogers, J., Gillette, M. U. & Popescu, G., Jan 17 2011, In : Optics Express. 19, 2, p. 1016-1026 11 p.

Research output: Contribution to journalArticle

microscopy
interference
phase contrast
cells
optical paths

Small vertical movement of a K+ channel voltage sensor measured with luminescence energy transfer

Posson, D. J., Ge, P., Miller, C., Bezanilla, F. & Selvin, P. R., Aug 11 2005, In : Nature. 436, 7052, p. 848-851 4 p.

Research output: Contribution to journalArticle

Voltage-Gated Potassium Channels
Scorpions
S 6
Energy Transfer
Lipid Bilayers

Small quantum dots conjugated to nanobodies as immunofluorescence probes for nanometric microscopy

Wang, Y., Cai, E., Rosenkranz, T., Ge, P., Teng, K. W., Lim, S. J., Smith, A. M., Chung, H. J., Sachs, F., Green, W. N., Gottlieb, P. & Selvin, P. R., Dec 17 2014, In : Bioconjugate Chemistry. 25, 12, p. 2205-2211 7 p.

Research output: Contribution to journalArticle

Single-Domain Antibodies
Quantum Dots
Antibodies
Semiconductor quantum dots
Fluorescent Antibody Technique

Slowing Bacterial Translation Speed Enhances Eukaryotic Protein Folding Efficiency

Siller, E., DeZwaan, D. C., Anderson, J. F., Freeman, B. C. & Barral, J. M., Jan 21 2010, In : Journal of Molecular Biology. 396, 5, p. 1310-1318 9 p.

Research output: Contribution to journalArticle

Protein Folding
Eukaryota
Bacteria
Recombinant Proteins
Peptides

Skeletal myocyte hypertrophy requires mTOR kinase activity and S6K1

Park, I. H., Erbay, E., Nuzzi, P. & Chen, J., Sep 10 2005, In : Experimental Cell Research. 309, 1, p. 211-219 9 p.

Research output: Contribution to journalArticle

Ribosomal Protein S6 Kinases
Skeletal Muscle Fibers
Sirolimus
Hypertrophy
Phosphotransferases

Site-specific regulation of histone H1 phosphorylation in pluripotent cell differentiation

Liao, R. & Mizzen, C. A., May 22 2017, In : Epigenetics and Chromatin. 10, 1, 29.

Research output: Contribution to journalArticle

Histones
Cell Differentiation
Phosphorylation
Interphase
Genes

Single-virus tracking reveals a spatial receptor-dependent search mechanism

Rothenberg, E., Sepúlveda, L. A., Skinner, S. O., Zeng, L., Selvin, P. R. & Golding, I., Jan 1 2011, In : Biophysical journal. 100, 12, p. 2875-2882 8 p.

Research output: Contribution to journalArticle

Viruses
Virus Attachment
Virus Receptors
Viral Genome
Virus Diseases

Single-molecule high-resolution imaging with photobleaching

Gordon, M. P., Ha, T. & Selvin, P. R., Apr 27 2004, In : Proceedings of the National Academy of Sciences of the United States of America. 101, 17, p. 6462-6465 4 p.

Research output: Contribution to journalArticle

Photobleaching
Coloring Agents
Fluorescence Resonance Energy Transfer
Fluorescent Dyes
Single Nucleotide Polymorphism

Single molecule FRET reveals pore size and opening mechanism of a mechano-sensitive ion channel

Wang, Y., Liu, Y., Deberg, H. A., Nomura, T., Hoffman, M. T. O., Rohde, P. R., Schulten, K., Martinac, B. & Selvin, P. R., Jan 1 2014, In : eLife. 3, p. e01834

Research output: Contribution to journalArticle

Molecular Models
Energy Transfer
Molecular Dynamics Simulation
Ion Channels
Liposomes

Single molecule FRET reveals pore size and opening mechanism of a mechano-sensitive ion channel

Wang, Y., Liu, Y., DeBerg, H. A., Nomura, T., Hoffman, M. T., Rohde, P. R., Schulten, K., Martinac, B. & Selvin, P. R., Feb 18 2014, In : eLife. 2014, 3, e01834.

Research output: Contribution to journalArticle

Molecular Models
Energy Transfer
Molecular Dynamics Simulation
Ion Channels
Liposomes

Single-molecule-based super-resolution images in the presence of multiple fluorophores

Simonson, P. D., Rothenberg, E. & Selvin, P. R., Nov 9 2011, In : Nano letters. 11, 11, p. 5090-5096 7 p.

Research output: Contribution to journalArticle

Fluorophores
image resolution
Image resolution
Molecules
diffraction

Single-Molecule Analysis of Lipid-Protein Interactions in Crude Cell Lysates

Arauz, E., Aggarwal, V., Jain, A., Ha, T. & Chen, J., May 3 2016, In : Analytical chemistry. 88, 8, p. 4269-4276 8 p.

Research output: Contribution to journalArticle

Lipids
Molecules
Proteins
Assays
Phospholipids

Silencing by small RNAs is linked to endosomal trafficking

Lee, Y. S., Pressman, S., Andress, A. P., Kim, K., White, J. L., Cassidy, J. J., Li, X., Lubell, K., Lim, D. H., Cho, I. S., Nakahara, K., Preall, J. B., Bellare, P., Sontheimer, E. J. & Carthew, R. W., Aug 17 2009, In : Nature Cell Biology. 11, 9, p. 1150-1156 7 p.

Research output: Contribution to journalArticle

RNA-Induced Silencing Complex
Multivesicular Bodies
RNA Interference
RNA
MicroRNAs

Signal transducer and activator of transcription 3 (STAT3) mediates amino acid inhibition of insulin ignaling through serine 727 phosphorylation

Kim, J. H., Yoon, M. S. & Chen, J., Dec 18 2009, In : Journal of Biological Chemistry. 284, 51, p. 35425-35432 8 p.

Research output: Contribution to journalArticle

STAT3 Transcription Factor
Phosphorylation
Serine
Insulin
Amino Acids

Signals from the Brainstem Sleep/Wake Centers Regulate Behavioral Timing via the Circadian Clock

Abbott, S. M., Arnold, J. M., Chang, Q., Miao, H., Ota, N., Cecala, C., Gold, P. E., Sweedler, J. V. & Gillette, M. L., Aug 12 2013, In : PloS one. 8, 8, e70481.

Research output: Contribution to journalArticle

Circadian Clocks
Suprachiasmatic Nucleus
brain stem
sleep
circadian rhythm

Serotonin regulates the phase of the rat suprachiasmatic circadian pacemaker in vitro only during the subjective day.

Medanic, M. & Gillette, M. U., May 1 1992, In : The Journal of Physiology. 450, 1, p. 629-642 14 p.

Research output: Contribution to journalArticle

Suprachiasmatic Nucleus
Serotonin
8-Hydroxy-2-(di-n-propylamino)tetralin
Circadian Rhythm
Serotonin 5-HT1 Receptors

Sequential recruitment of HAT and SWI/SNF components to condensed chromatin by VP16

Memedula, S. & Belmont, A. S., Feb 2003, In : Current Biology. 13, 3, p. 241-246 6 p.

Research output: Contribution to journalArticle

Chromatin
chromatin
Chromatin Assembly and Disassembly
Mediator Complex
Locus Control Region

Sequential involvement of Cdk1, mTOR and p53 in apoptosis induced by the HIV-1 envelope

Castedo, M., Roumier, T., Blanco, J., Ferri, K. F., Barretina, J., Tintignac, L. A., Andreau, K., Perfettini, J. L., Amendola, A., Nardacci, R., Leduc, P., Ingber, D. E., Druillennec, S., Roques, B., Leibovitch, S. A., Vilella-Bach, M., Chen, J., Este, J. A., Modjtahedi, N., Piacentini, M. & 1 others, Kroemer, G., Aug 1 2002, In : EMBO Journal. 21, 15, p. 4070-4080 11 p.

Research output: Contribution to journalArticle

CDC2 Protein Kinase
Sirolimus
Phosphorylation
HIV-1
Cyclin B

Sequences far downstream from the classical tRNA promoter elements bind RNA polymerase III transcription factors

Young, L. S., Rivier, D. H. & Sprague, K. U., Mar 1991, In : Molecular and cellular biology. 11, 3, p. 1382-1392 11 p.

Research output: Contribution to journalArticle

RNA Polymerase III
Transfer RNA
Transcription Factors
Genes
Bombyx

Sequence analysis of the ERCC2 gene regions in human, mouse, and hamster reveals three linked genes

Lamerdin, J. E., Stilwagen, S. A., Ramirez, M. H., Stubbs, L. & Carrano, A. V., Jun 15 1996, In : Genomics. 34, 3, p. 399-409 11 p.

Research output: Contribution to journalArticle

Cricetinae
Sequence Analysis
Genes
Transcription Factor TFIIH
Trichothiodystrophy Syndromes