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Molecular profiling: Gene expression reveals discrete phases of lens induction and development in Xenopus laevis

Walter, B. E., Tian, Y., Garlisch, A. K., Carinato, M. E., Elkins, M. B., Wolfe, A. D., Schaefer, J. J., Perry, K. J. & Henry, J. J., Mar 24 2004, In : Molecular Vision. 10, p. 186-198 13 p.

Research output: Contribution to journalArticle

Xenopus laevis
Gene Expression Profiling
Lenses
Genes
Ectoderm

Morphogenesis along the animal-vegetal axis: Fates of primary quartet micromere daughters in the gastropod Crepidula fornicata

Lyons, D. C., Perry, K. J. & Henry, J. J., Sep 15 2017, In : BMC Evolutionary Biology. 17, 1, 217.

Research output: Contribution to journalArticle

morphogenesis
gastropod
Gastropoda
embryo
animal

Motor domain phosphorylation modulates kinesin-1 transport

DeBerg, H. A., Blehm, B. H., Sheung, J., Thompson, A. R., Bookwalter, C. S., Torabi, S. F., Schroer, T. A., Berger, C. L., Lu, Y., Trybus, K. M. & Selvin, P. R., Nov 8 2013, In : Journal of Biological Chemistry. 288, 45, p. 32612-32621 10 p.

Research output: Contribution to journalArticle

Kinesin
Phosphorylation
Microtubules
Protein Isoforms
Neurodegenerative diseases

MOV10 and FMRP Regulate AGO2 Association with MicroRNA Recognition Elements

Kenny, P. J., Zhou, H., Kim, M., Skariah, G., Khetani, R. S., Drnevich, J., Arcila, M. L., Kosik, K. S. & Ceman, S., Dec 11 2014, In : Cell Reports. 9, 5, p. 1729-1741 13 p.

Research output: Contribution to journalArticle

MicroRNAs
RNA
Fragile X Mental Retardation Protein
RNA Helicases
Messenger RNA

Mov10 suppresses retroelements and regulates neuronal development and function in the developing brain

Skariah, G., Seimetz, J., Norsworthy, M., Lannom, M. C., Kenny, P. J., Elrakhawy, M., Forsthoefel, C., Drnevich, J., Kalsotra, A. & Ceman, S., Jun 29 2017, In : BMC biology. 15, 1, 54.

Research output: Contribution to journalArticle

Moloney murine leukemia virus
Retroelements
retrotransposons
leukemia
Viruses

MSX2 mediates entry of human pluripotent stem cells into mesendoderm by simultaneously suppressing SOX2 and activating NODAL signaling

Wu, Q., Zhang, L., Su, P., Lei, X., Liu, X., Wang, H., Lu, L., Bai, Y., Xiong, T., Li, D., Zhu, Z., Duan, E., Jiang, E., Feng, S., Han, M., Xu, Y., Wang, F. & Zhou, J., Dec 1 2015, In : Cell Research. 25, 12, p. 1314-1332 19 p.

Research output: Contribution to journalArticle

Pluripotent Stem Cells
Homeobox Genes
Muscles
Homeodomain Proteins
Germ Layers

mTOR regulates skeletal muscle regeneration in vivo through kinase-dependent and kinase-independent mechanisms

Ge, Y., Wu, A. L., Warnes, C., Liu, J., Zhang, C., Kawasome, H., Terada, N., Boppart, M. D., Schoenherr, C. J. & Chen, J., Dec 1 2009, In : American Journal of Physiology - Cell Physiology. 297, 6

Research output: Contribution to journalArticle

Sirolimus
Regeneration
Skeletal Muscle
Phosphotransferases
Muscles

mTOR supports long-term self-renewal and suppresses mesoderm and endoderm activities of human embryonic stem cells

Zhou, J., Su, P., Wang, L., Chen, J., Zimmermann, M., Genbacev, O., Afonja, O., Horne, M. C., Tanaka, T., Duan, E., Fisher, S. J., Liao, J., Chen, J. & Wang, F., May 12 2009, In : Proceedings of the National Academy of Sciences of the United States of America. 106, 19, p. 7840-7845 6 p.

Research output: Contribution to journalArticle

Endoderm
Mesoderm
Sirolimus
Developmental Genes
Protein-Serine-Threonine Kinases

Multicolor super-resolution DNA imaging for genetic analysis

Baday, M., Cravens, A., Hastie, A., Kim, H., Kudeki, D. E., Kwok, P. Y., Xiao, M. & Selvin, P. R., Jul 11 2012, In : Nano Letters. 12, 7, p. 3861-3866 6 p.

Research output: Contribution to journalArticle

DNA
deoxyribonucleic acid
Endonucleases
Imaging techniques
enzymes

Multidentate Polymer Coatings for Compact and Homogeneous Quantum Dots with Efficient Bioconjugation

Ma, L., Tu, C., Le, P., Chitoor, S., Lim, S. J., Zahid, M. U., Teng, K. W., Ge, P., Selvin, P. R. & Smith, A. M., Mar 16 2016, In : Journal of the American Chemical Society. 138, 10, p. 3382-3394 13 p.

Research output: Contribution to journalArticle

Quantum Dots
Nanoparticles
Semiconductor quantum dots
ligand
coating

Multimodal Chemical Analysis of the Brain by High Mass Resolution Mass Spectrometry and Infrared Spectroscopic Imaging

Neumann, E. K., Comi, T. J., Spegazzini, N., Mitchell, J. W., Rubakhin, S. S., Gillette, M. U., Bhargava, R. & Sweedler, J. V., Oct 2 2018, In : Analytical chemistry. 90, 19, p. 11572-11580 9 p.

Research output: Contribution to journalArticle

Mass spectrometry
Brain
Infrared radiation
Imaging techniques
Chemical analysis

Multiple inductive signals are involved in the development of the ctenophore Mnemiopsis leidyi

Henry, J. Q. & Martindale, M. Q., Oct 1 2001, In : Developmental Biology. 238, 1, p. 40-46 7 p.

Research output: Contribution to journalArticle

Ctenophora
Comb and Wattles
Cilia
Cell Lineage
Embryonic Development

Multiple kinesins induce tension for smooth cargo transport

Tjioe, M., Shukla, S., Vaidya, R., Troitskaia, A., Bookwalter, C., Trybus, K. M., Chemla, Y. R. & Selvin, P. R., Oct 2019, In : eLife. 8, e50974.

Research output: Contribution to journalArticle

Open Access
Kinesin
Microtubules
Assays
Molecules

Multiple regimes of constrained chromosome motion are regulated in the interphase Drosophila nucleus

Vazquez, J., Belmont, A. S. & Sedat, J. W., Aug 21 2001, In : Current Biology. 11, 16, p. 1227-1239 13 p.

Research output: Contribution to journalArticle

Interphase
Chromosomes
interphase
Drosophila
chromosomes

Mutually inhibitory Ras-PI(3,4)P 2 feedback loops mediate cell migration

Li, X., Edwards, M., Swaney, K. F., Singh, N., Bhattacharya, S., Borleis, J., Long, Y., Iglesias, P. A., Chen, J. & Devreotes, P. N., Sep 25 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 39, p. E9125-E9134

Research output: Contribution to journalArticle

Cell Movement
Phosphoric Monoester Hydrolases
Physiological Phenomena
Chemotactic Factors
Cytoskeleton
Open Access
Actinin
Intercellular Junctions
Cadherins
Myosins
Epithelial Cells

Myosin VI Dimerization Triggers an Unfolding of a Three-Helix Bundle in Order to Extend Its Reach

Mukherjea, M., Llinas, P., Kim, H. J., Travaglia, M., Safer, D., Ménétrey, J., Franzini-Armstrong, C., Selvin, P. R., Houdusse, A. & Sweeney, H. L., Aug 14 2009, In : Molecular cell. 35, 3, p. 305-315 11 p.

Research output: Contribution to journalArticle

Dimerization
Actins
Myosins
Reference Values
Fluorescence

Myosin VI steps via a hand-over-hand mechanism with its lever arm undergoing fluctuations when attached to actin

Yildiz, A., Park, H., Safer, D., Yang, Z., Chen, L. Q., Selvin, P. R. & Sweeney, H. L., Sep 3 2004, In : Journal of Biological Chemistry. 279, 36, p. 37223-37226 4 p.

Research output: Contribution to journalArticle

Actins
Hand
Fluorophores
Optical Imaging
Calmodulin

Myosin VI undergoes a 180° power stroke implying an uncoupling of the front lever arm

Reifenberger, J. G., Toprak, E., Kim, H. J., Safer, D., Sweeney, H. L. & Selvin, P. R., Dec 4 2009, In : Proceedings of the National Academy of Sciences of the United States of America. 106, 43, p. 18255-18260 6 p.

Research output: Contribution to journalArticle

Stroke
Head
Light
Rhodamines
Solar System

Myosin V walks hand-over-hand: Single fluorophore imaging with 1.5-nm localization

Yildiz, A., Forkey, J. N., McKinney, S. A., Ha, T., Goldman, Y. E. & Selvin, P. R., Jun 27 2003, In : Science. 300, 5628, p. 2061-2065 5 p.

Research output: Contribution to journalArticle

Myosin Type V
Hand
Actins
Coloring Agents
Adenosine Triphosphate

Myrosinase in horseradish (Armoracia rusticana) root: Isolation of a full-length cDNA and its heterologous expression in Spodoptera frugiperda insect cells

Li, X., Wen, Z., Bohnert, H. J., Schuler, M. A. & Kushad, M. M., Jun 1 2007, In : Plant Science. 172, 6, p. 1095-1102 8 p.

Research output: Contribution to journalArticle

Armoracia
Armoracia rusticana
horseradish
thioglucosidase
Spodoptera

Nanometer localization of single fluorescent proteins: Evidence that myosin V walks hand-over-hand via telemark configuration

Snyder, G. E., Sakamoto, T., Hammer, J. A., Sellers, J. R. & Selvin, P. R., Sep 2004, In : Biophysical journal. 87, 3, p. 1776-1783 8 p.

Research output: Contribution to journalArticle

Myosin Type V
Myosins
Hand
Proteins
Actin Cytoskeleton

Nanometre localization of single ReAsH molecules

Park, H., Hanson, G. T., Duff, S. R. & Selvin, P. R., Dec 1 2004, In : Journal of Microscopy. 216, 3, p. 199-205 7 p.

Research output: Contribution to journalArticle

cysteinylcysteine
Calmodulin
Photons
Coloring Agents
Observation

Natural antisense RNA promotes 3′ end processing and maturation of MALAT1 lncRNA

Zong, X., Nakagawa, S., Freier, S. M., Fei, J., Ha, T., Prasanth, S. G. & Prasanth, K. V., Jan 29 2016, In : Nucleic acids research. 44, 6, p. 2898-2908 11 p.

Research output: Contribution to journalArticle

RNA 3' End Processing
Long Noncoding RNA
Antisense RNA
Ribonuclease P
RNA

N-cadherin regulates spatially polarized signals through distinct p120ctn and β-catenin-dependent signalling pathways

Ouyang, M., Lu, S., Kim, T., Chen, C. E., Seong, J., Leckband, D. E., Wang, F., Reynolds, A. B., Schwartz, M. A. & Wang, Y., Apr 10 2013, In : Nature communications. 4, 1589.

Research output: Contribution to journalArticle

Catenins
1-Phosphatidylinositol 4-Kinase
Cadherins
Phosphatidylinositols
myosins

Neural and eye-specific defects associated with loss of the Imitation Switch (ISWI) chromatin remodeler in Xenopus laevis

Dirscherl, S. S., Henry, J. J. & Krebs, J. E., Nov 1 2005, In : Mechanisms of Development. 122, 11, p. 1157-1170 14 p.

Research output: Contribution to journalArticle

Xenopus laevis
Xenopus
Chromatin
Adenosine Triphosphate
Switch Genes

Neuromolecular responses to social challenge: Common mechanisms across mouse, stickleback fish, and honey bee

Rittschof, C. C., Bukhari, S. A., Sloofman, L. G., Troy, J. M., Caetano-Anollés, D., Cash-Ahmed, A., Kent, M., Lu, X., Sanogo, Y. O., Weisner, P. A., Zhang, H., Bell, A. M., Ma, J., Sinha, S., Robinson, G. E. & Stubbs, L., Dec 16 2014, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 50, p. 17929-17934 6 p.

Research output: Contribution to journalArticle

Smegmamorpha
Honey
Bees
Fishes
Energy Metabolism

Neuronal leucine-rich repeat 6 (XlNLRR-6) is required for late lens and retina development in Xenopus laevis

Wolfe, A. D. & Henry, J. J., Apr 1 2006, In : Developmental Dynamics. 235, 4, p. 1027-1041 15 p.

Research output: Contribution to journalArticle

Xenopus laevis
Leucine
Lenses
Retina
Morpholinos

Neuropeptidomics of the supraoptic rat nucleus

Bora, A., Annangudi, S. P., Millet, L. J., Rubakhin, S. S., Forbes, A. J., Kelleher, N. L., Gillette, M. U. & Sweedler, J. V., Nov 1 2008, In : Journal of Proteome Research. 7, 11, p. 4992-5003 12 p.

Research output: Contribution to journalArticle

Supraoptic Nucleus
Rats
Peptides
Tandem Mass Spectrometry
Vasopressins

Neutrophil microtubules suppress polarity and enhance directional migration

Xu, J., Wang, F., Van Keymeulen, A., Rentel, M. & Bourne, H. R., May 10 2005, In : Proceedings of the National Academy of Sciences of the United States of America. 102, 19, p. 6884-6889 6 p.

Research output: Contribution to journalArticle

Nocodazole
Microtubules
methionyl-leucyl-phenylalanine
Neutrophils
Pseudopodia

New 9- or 10-dentate luminescent lanthanide chelates

Ge, P. & Selvin, P. R., May 1 2008, In : Bioconjugate Chemistry. 19, 5, p. 1105-1111 7 p.

Research output: Contribution to journalArticle

Lanthanoid Series Elements
Rare earth elements
Ions
Molecules
Antennas

New light on an old paradox: Site-dependent effects of carbachol on circadian rhythms

Buchanan, G. F. & Gillette, M. U., Jun 2005, In : Experimental Neurology. 193, 2, p. 489-496 8 p.

Research output: Contribution to journalArticle

Carbachol
Circadian Rhythm
Suprachiasmatic Nucleus
Cholinergic Agents
Light
Silicon
Datasets
Direction compound

Nitric oxide synthase activity in the molluscan CNS

Moroz, L. L., Chen, D., Gillette, M. L. & Gillette, R., Feb 1996, In : Journal of Neurochemistry. 66, 2, p. 873-876 4 p.

Research output: Contribution to journalArticle

Pleurobranchaea
Citrulline
Nitric Oxide Synthase
Neurons
Arginine

Nitric oxide synthase imunolabeling in the molluscan CNS and peripheral tissues

Hurst, W. J., Moroz, L. L., Gillette, M. U. & Gillette, R., Aug 27 1999, In : Biochemical and Biophysical Research Communications. 262, 2, p. 545-548 4 p.

Research output: Contribution to journalArticle

Pleurobranchaea
Aplysia
Nitric Oxide Synthase
Labeling
Esophagus

Nitric oxide synthase inhibitor blocks light-induced phase shifts of the circadian activity rhythm, but not c-fos expression in the suprachiasmatic nucleus of the Syrian hamster

Todd Weber, E., Gannon, R. L., Michel, A. M., Gillette, M. U. & Rea, M. A., Sep 18 1995, In : Brain Research. 692, 1-2, p. 137-142 6 p.

Research output: Contribution to journalArticle

Suprachiasmatic Nucleus
Mesocricetus
Circadian Rhythm
Nitric Oxide Synthase
Light

NLRP12 promotes mouse neutrophil differentiation through regulation of non-canonical NF-κB and MAPKERK1/2 signaling

Wang, Q., Liu, F., Zhang, M., Zhou, P., Xu, C., Li, Y., Bian, L., Liu, Y., Yao, Y., Wang, F., Fang, Y. & Li, D., Jan 13 2018, In : International Journal of Biological Sciences. 14, 2, p. 147-155 9 p.

Research output: Contribution to journalArticle

Leucine
leucine
neutrophils
Neutrophils
Nucleotides

Nontranslational function of leucyl-tRNA synthetase regulates myogenic differentiation and skeletal muscle regeneration

Son, K., You, J. S., Yoon, M. S., Dai, C., Kim, J. H., Khanna, N., Banerjee, A., Martinis, S. A., Han, G., Han, J. M., Kim, S. & Chen, J., May 1 2019, In : Journal of Clinical Investigation. 129, 5, p. 2088-2093 6 p.

Research output: Contribution to journalArticle

Open Access
Amino Acyl-tRNA Synthetases
Regeneration
Skeletal Muscle
Muscle Development
Transfer RNA Aminoacylation

Novel domains in the hnRNP G/RBMX protein with distinct roles in RNA binding and targeting nascent transcripts

Kanhoush, R., Beenders, B., Perrin, C., Moreau, J., Bellini, M. & Penrad-Mobayed, M., Jan 1 2010, In : Nucleus. 1, 1, p. 109-122 14 p.

Research output: Contribution to journalArticle

Ribonucleoproteins
RNA
Proteins
RNA Precursors
RNA Probes

Nuclear organization and dynamics of 7SK RNA in regulating gene expression

Prasanth, K. V., Camiolo, M., Chan, G., Tripathi, V., Denis, L., Nakamura, T., Hübner, M. R. & Spector, D. L., Dec 1 2010, In : Molecular biology of the cell. 21, 23, p. 4184-4196 13 p.

Research output: Contribution to journalArticle

Positive Transcriptional Elongation Factor B
RNA
RNA Polymerase II
Gene Expression
Reporter Genes

Nuclear speckle fusion via long-range directional motion regulates speckle morphology after transcriptional inhibition

Kim, J., Han, K. Y., Khanna, N., Ha, T. & Belmont, A. S., Apr 1 2019, In : Journal of cell science. 132, 8, 226563.

Research output: Contribution to journalArticle

Open Access
Nuclear Fusion
Articular Range of Motion
Chromatin
Actins
Hot Temperature

Nuclear ultrastructure: transmission electron microscopy and image analysis

Belmont, A. S., Dec 1 1998, In : Methods in Cell Biology. 53, p. 99-124 26 p.

Research output: Contribution to journalArticle

Interference Microscopy
Tissue Fixation
Computer-Assisted Image Processing
Cell Nucleus
Transmission Electron Microscopy

Oligodeoxynucleotide methods for analyzing the circadian clock in the suprachiasmatic nucleus

Tischkau, S. A. & Gillette, M. L., Jan 1 2005, In : Methods in enzymology. 393, p. 593-610 18 p., 31.

Research output: Contribution to journalArticle

Circadian Clocks
Suprachiasmatic Nucleus
Oligodeoxyribonucleotides
Periodicity
Clocks

One-dimensional deterministic transport in neurons measured by dispersion-relation phase spectroscopy

Wang, R., Wang, Z., Leigh, J., Sobh, N., Millet, L., Gillette, M. U., Levine, A. J. & Popescu, G., Sep 21 2011, In : Journal of Physics Condensed Matter. 23, 37, 374107.

Research output: Contribution to journalArticle

neurons
Neurons
Spectroscopy
cargo
spectroscopy

Optical excitation and detection of neuronal activity

Hu, C., Sam, R., Shan, M., Nastasa, V., Wang, M., Kim, T., Gillette, M., Sengupta, P. & Popescu, G., Mar 2019, In : Journal of Biophotonics. 12, 3, e201800269.

Research output: Contribution to journalArticle

Optogenetics
Photoexcitation
stimulation
Electrophysiology
Imaging techniques

Optical measurement of cycle-dependent cell growth

Mir, M., Wang, Z., Shen, Z., Bednarz, M., Bashir, R., Golding, I., Prasanth, S. G. & Popescu, G., Aug 9 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 32, p. 13124-13129 6 p.

Research output: Contribution to journalArticle

Cell Cycle
Growth
Interference Microscopy
Cell Size
Light

Orc1 binding to mitotic chromosomes precedes spatial patterning during G1 phase and assembly of the origin recognition complex in human cells

Kara, N., Hossain, M., Prasanth, S. G. & Stillman, B., May 8 2015, In : Journal of Biological Chemistry. 290, 19, p. 12355-12369 15 p.

Research output: Contribution to journalArticle

Origin Recognition Complex
G1 Phase
Chromosomes
Cells
Chromatin

Orc1 controls centriole and centrosome copy number in human cells

Hemerly, A. S., Prasanth, S. G., Siddiqui, K. & Stillman, B., Feb 6 2009, In : Science. 323, 5915, p. 789-793 5 p.

Research output: Contribution to journalArticle

Centrioles
Centrosome
DNA Replication
Origin Recognition Complex
Cyclin A

Orc2 protects ORCA from ubiquitin-mediated degradation

Shen, Z. & Prasanth, S. G., Oct 1 2012, In : Cell Cycle. 11, 19, p. 3578-3589 12 p.

Research output: Contribution to journalArticle

Origin Recognition Complex
Ubiquitin
Ubiquitination
Chromatin
Cell Cycle

Orc5 induces large-scale chromatin decondensation in a GCN5-dependent manner

Giri, S., Chakraborty, A., Sathyan, K. M., Prasanth, K. V. & Prasanth, S. G., Jan 1 2016, In : Journal of cell science. 129, 2, p. 417-429 13 p.

Research output: Contribution to journalArticle

Chromatin
Origin Recognition Complex
Histones
Centrosome
Cytokinesis