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Cell versus nuclear morphometry of serum-stimulated fibroblasts: Nuclear changes precede cell changes

Belmont, A. S. & Nicolini, C. A., Jan 1 1982, In : Journal of cell science. Vol. 58, p. 201-209 9 p.

Research output: Contribution to journalArticle

Fibroblasts
Serum
Growth

Certain and progressive methylation of histone H4 at lysine 20 during the cell cycle

Pesavento, J. J., Yang, H., Kelleher, N. L. & Mizzen, C. A., Jan 1 2008, In : Molecular and cellular biology. 28, 1, p. 468-486 19 p.

Research output: Contribution to journalArticle

Histones
Methylation
Lysine
Cell Cycle
Acetylation
Suprachiasmatic Nucleus
Circadian Clocks
Mammals
Cyclic Nucleotides
Darkness

Characterization and evolution of furanocoumarin-inducible cytochrome P450s in the parsnip webworm, Depressaria pastinacella

Li, W., Zangerl, A. R., Schuler, M. A. & Berenbaum, M. R., Dec 2004, In : Insect Molecular Biology. 13, 6, p. 603-613 11 p.

Research output: Contribution to journalArticle

Depressaria pastinacella
Pastinaca
psoralens
Cytochromes
cytochromes

Characterization of maize cytochrome P450 monooxygenases induced in response to safeners and bacterial pathogens

Persans, M. W., Wang, J. & Schuler, M. A., Mar 6 2001, In : Plant physiology. 125, 2, p. 1126-1138 13 p.

Research output: Contribution to journalArticle

naphthalic anhydride
Mixed Function Oxygenases
Seedlings
cytochrome P-450
Cytochrome P-450 Enzyme System

Characterization of neurohistone variants and post-translational modifications by electron capture dissociation mass spectrometry

Garcia, B. A., Siuti, N., Thomas, C. E., Mizzen, C. A. & Kelleher, N. L., Jan 1 2007, In : International Journal of Mass Spectrometry. 259, 1-3, p. 184-196 13 p.

Research output: Contribution to journalArticle

electron capture
Histones
Mass spectrometry
Brain
mass spectroscopy

Characterizing gene expression during lens formation in Xenopus laevis: Evaluating the model for embryonic lens induction

Henry, J. J., Carinato, M. E., Schaefer, J. J., Wolfe, A. D., Walter, B. E., Perry, K. J. & Elbl, T. N., Jun 8 2002, In : Developmental Dynamics. 224, 2, p. 168-185 18 p.

Research output: Contribution to journalArticle

Embryonic Induction
Xenopus laevis
Lenses
Gene Expression
Embryonic Development

Cholinergic regulation of the suprachiasmatic nucleus circadian rhythm via a muscarinic mechanism at night

Liu, C. & Gillette, M. U., Jan 15 1996, In : Journal of Neuroscience. 16, 2, p. 744-751 8 p.

Research output: Contribution to journalArticle

Suprachiasmatic Nucleus
Carbachol
Circadian Rhythm
Cholinergic Agents
Cholinergic Agonists

Chromatin docking and exchange activity enhancement of RCC1 by histones H2A and H2B

Nemergut, M. E., Mizzen, C. A., Stukenberg, T., Allis, C. D. & Macara, I. G., May 25 2001, In : Science. 292, 5521, p. 1540-1543 4 p.

Research output: Contribution to journalArticle

Chromosomes, Human, Pair 1
Histones
Chromatin
Cell Nucleus Active Transport
Nuclear Envelope

Chromatin dynamics in interphase cells revealed by tracking in a two-photon excitation microscope

Levi, V., Ruan, Q. Q., Plutz, M., Belmont, A. S. & Gratton, E., Dec 2005, In : Biophysical journal. 89, 6, p. 4275-4285 11 p.

Research output: Contribution to journalArticle

Cell Tracking
Interphase
Photons
Chromatin
Lac Repressors

Chromosomal targeting of a maternal nuclear protein

Bellini, M., Perrin, K., Lacroix, JC. C. & Gall, J. G., 1995, In : Biology of the Cell. 84, 1-2, p. 121 1 p.

Research output: Contribution to journalArticle

Nuclear Proteins
Mothers

Circadian actions of melatonin at the suprachiasmatic nucleus

Gillette, M. U. & McArthur, A. J., Dec 15 1995, In : Behavioural Brain Research. 73, 1-2, p. 135-139 5 p.

Research output: Contribution to journalArticle

Suprachiasmatic Nucleus
Melatonin
Biological Clocks
Circadian Clocks
Hypothalamus

Circadian clock-controlled regulation of cGMP-protein kinase G in the nocturnal domain

Tischkau, S. A., Weber, E. T., Abbott, S. M., Mitchell, J. W. & Gillette, M. L., Aug 20 2003, In : Journal of Neuroscience. 23, 20, p. 7543-7550 8 p.

Research output: Contribution to journalArticle

Cyclic GMP-Dependent Protein Kinases
Circadian Clocks
Suprachiasmatic Nucleus
Guanylate Cyclase
Oligodeoxyribonucleotides

Circadian integration of glutamatergic signals by little SAAS in novel suprachiasmatic circuits

Atkins, N., Mitchell, J. W., Romanova, E. V., Morgan, D. J., Cominski, T. P., Ecker, J. L., Pintar, J. E., Sweedler, J. V. & Gillette, M. U., Nov 1 2010, In : PloS one. 5, 9, p. 1-13 13 p., e12612.

Research output: Contribution to journalArticle

Suprachiasmatic Nucleus
Gastrin-Releasing Peptide
Light
Networks (circuits)
Vasoactive Intestinal Peptide

Circadian rhythm of redox state regulates excitability in suprachiasmatic nucleus neurons

Wang, T. A., Yu, Y. V., Govindaiah, G., Ye, X., Artinian, L., Coleman, T. P., Sweedler, J. V., Cox, C. L. & Gillette, M. U., Aug 17 2012, In : Science. 337, 6096, p. 839-842 4 p.

Research output: Contribution to journalArticle

Suprachiasmatic Nucleus
Circadian Rhythm
Neurons
Circadian Clocks
Potassium Channels

Circadian rhythm of redox state regulates membrane excitability in hippocampal CA1 neurons

Naseri Kouzehgarani, G., Bothwell, M. Y. & Gillette, M. U., Jan 1 2019, (Accepted/In press) In : European Journal of Neuroscience.

Research output: Contribution to journalArticle

Suprachiasmatic Nucleus
Circadian Rhythm
Oxidation-Reduction
Neurons
Membranes

Circadian rhythm of the rat suprachiasmatic brain slice is rapidly reset by daytime application of cAMP analogs

Gillette, M. U. & Prosser, R. A., Dec 6 1988, In : Brain Research. 474, 2, p. 348-352 5 p.

Research output: Contribution to journalArticle

Suprachiasmatic Nucleus
Circadian Rhythm
Baths
Mammals
Brain
Glycogen Synthase Kinase 3
Apigenin
Luteolin
Citrus
Quercetin

Class-dependent sequence alignment strategy improves the structural and functional modeling of P450s

Baudry, J., Rupasinghe, S. & Schuler, M. A., Aug 1 2006, In : Protein Engineering, Design and Selection. 19, 8, p. 345-353 9 p.

Research output: Contribution to journalArticle

Sequence Alignment
Crystal structure
Ligands
Model structures
Proteins

Class III PI-3-kinase activates phospholipase D in an amino acid-sensing mTORC1 pathway

Yoon, M. S., Du, G., Backer, J. M., Frohman, M. A. & Chen, J., Oct 31 2011, In : Journal of Cell Biology. 195, 3, p. 435-447 13 p.

Research output: Contribution to journalArticle

Phospholipase D
Phosphatidylinositol 3-Kinases
Amino Acids
Aminoacylation
Sirolimus

Cleavage pattern and fate map of the mesentoblast, 4d, in the gastropod Crepidula: a hallmark of spiralian development

Lyons, D. C., Perry, K. J., Lesoway, M. P. & Henry, J. J., Sep 19 2012, In : EvoDevo. 3, 1, 21.

Research output: Contribution to journalArticle

Gastropoda
gastropod
cleavage
annelid
muscle

Cloning of wound-induced cytochrome P450 monooxygenases expressed in pea

Frank, M. R., Deyneka, J. M. & Schuler, M. A., Mar 1996, In : Plant physiology. 110, 3, p. 1035-1046 12 p.

Research output: Contribution to journalArticle

Peas
phenylpropanoids
plant damage
Mixed Function Oxygenases
cytochrome P-450

Clustering of six human 11p15 gene homologs within a 500-kb interval of proximal mouse chromosome 7

Stubbs, L., Rinchik, E. M., Goldberg, E., Rudy, B., Handel, M. A. & Johnson, D., Nov 15 1994, In : Genomics. 24, 2, p. 324-332 9 p.

Research output: Contribution to journalArticle

Chromosomes, Human, Pair 7
Cluster Analysis
Tryptophan Hydroxylase
Genes
Voltage-Gated Potassium Channels

Coilin can form a complex with the U7 small nuclear ribonucleoprotein

Bellini, M. & Gall, J. G., Oct 1998, In : Molecular biology of the cell. 9, 10, p. 2987-3001 15 p.

Research output: Contribution to journalArticle

U7 Small Nuclear Ribonucleoproteins
Coiled Bodies
Histones
Oocytes
Chromosomes

Coilin shuttles between the nucleus and cytoplasm in Xenopus oocytes

Bellini, M. & Gall, J. G., Oct 1999, In : Molecular biology of the cell. 10, 10, p. 3425-3434 10 p.

Research output: Contribution to journalArticle

Coiled Bodies
Xenopus
Oocytes
Cytoplasm
Organelles
NADPH-Ferrihemoprotein Reductase
Lipid bilayers
Lipid Bilayers
Arabidopsis
Cytochrome P-450 Enzyme System

Collapsin response mediator protein-1 regulates Arp2/3-dependent actin assembly

Yu-Kemp, H. C. & Brieher, W. M., Jan 8 2016, In : Journal of Biological Chemistry. 291, 2, p. 658-664 7 p.

Research output: Contribution to journalArticle

Listeria
Actins
Tail
Actin-Related Protein 2-3 Complex
Cytosol

Combinatorial Discovery of Defined Substrates That Promote a Stem Cell State in Malignant Melanoma

Zhang, D., Lee, J., Sun, M. B., Pei, Y., Chu, J., Gillette, M. U., Fan, T. M. & Kilian, K. A., May 24 2017, In : ACS Central Science. 3, 5, p. 381-393 13 p.

Research output: Contribution to journalArticle

Stem cells
Cells
Peptides
Proteoglycans
Substrates

Combinatorial modification of human histone H4 quantitated by two-dimensional liquid chromatography coupled with top down mass spectrometry

Pesavento, J. J., Bullock, C. R., LeDuc, R. D., Mizzen, C. A. & Kelleher, N. L., May 30 2008, In : Journal of Biological Chemistry. 283, 22, p. 14927-14937 11 p.

Research output: Contribution to journalArticle

Liquid chromatography
Liquid Chromatography
Acetylation
Histones
Methylation

Common active site architecture and binding strategy of four phenylpropanoid P450s from Arabidopsis thaliana as revealed by molecular modeling

Rupasinghe, S., Baudry, J. & Schuler, M. A., Oct 1 2003, In : Protein Engineering. 16, 10, p. 721-731 11 p.

Research output: Contribution to journalArticle

Molecular modeling
Mixed Function Oxygenases
Arabidopsis
Catalytic Domain
Substrates

Common effects of acidic activators on large-scale chromatin structure and transcription

Carpenter, A. E., Memedula, S., Plutz, M. J. & Belmont, A. S., Feb 1 2005, In : Molecular and cellular biology. 25, 3, p. 958-968 11 p.

Research output: Contribution to journalArticle

Chromatin
Peptides
Activator Appliances
Transcriptional Activation
Viral Proteins

Comparative analysis of a conserved zinc finger gene cluster on human chromosome 19q and mouse chromosome 7

Shannon, M., Ashworth, L. K., Mucenski, M. L., Lamerdin, J. E., Branscomb, E. & Stubbs, L., Apr 1 1996, In : Genomics. 33, 1, p. 112-120 9 p.

Research output: Contribution to journalArticle

Chromosomes, Human, Pair 7
Zinc Fingers
Human Chromosomes
Multigene Family
Genes

Comparative analysis of weighted gene coexpression networks in human and mouse

Eidsaa, M., Stubbs, L. & Almaas, E., Nov 2017, In : PloS one. 12, 11, e0187611.

Research output: Contribution to journalArticle

Gene Regulatory Networks
Genes
mice
genes
Gene Ontology

Comparative genomics of rice and arabidopsis. Analysis of 727 cytochrome P450 genes and pseudogenes from a monocot and a dicot

Nelson, D. R., Schuler, M. A., Paquette, S. M., Werck-Reichhart, D. & Bak, S., Jun 1 2004, In : Plant physiology. 135, 2, p. 756-772 17 p.

Research output: Contribution to journalArticle

Pseudogenes
pseudogenes
Genomics
Magnoliopsida
Liliopsida

Comparative molecular modeling of Anopheles gambiae CYP6Z1, a mosquito P450 capable of metabolizing DDT

Chiu, T. L., Wen, Z., Rupasinghe, S. G. & Schuler, M. A., Jul 1 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 26, p. 8855-8860 6 p.

Research output: Contribution to journalArticle

Anopheles gambiae
DDT
Culicidae
Catalytic Domain
Insecticide Resistance

Comparative toxicity of mycotoxins to navel orangeworm (Amyelois transitella) and corn earworm (Helicoverpa zea)

Niu, G., Siegel, J., Schuler, M. A. & Berenbaum, M. R., Aug 14 2009, In : Journal of Chemical Ecology. 35, 8, p. 951-957 7 p.

Research output: Contribution to journalArticle

Amyelois transitella
Aflatoxins
Helicoverpa zea
Mycotoxins
mycotoxins

Comparing label-free quantitative peptidomics approaches to characterize diurnal variation of peptides in the rat suprachiasmatic nucleus

Southey, B. R., Lee, J. E., Zamdborg, L., Atkins, N., Mitchell, J. W., Li, M., Gillette, M. U., Kelleher, N. L. & Sweedler, J. V., Jan 7 2014, In : Analytical chemistry. 86, 1, p. 443-452 10 p.

Research output: Contribution to journalArticle

Rats
Labels
Peptides
Neuropeptides
Secretogranin II

Comparison of murine Supt4h and a nearly identical expressed, processed gene: Evidence of sequence conservation through gene conversion extending into the untranslated regions

Chiang, P. W., Zhang, R., Stubbs, L., Zhang, L., Zhu, L. & Kurnit, D. M., Nov 1 1998, In : Nucleic acids research. 26, 21, p. 4960-4964 5 p.

Research output: Contribution to journalArticle

Untranslated Regions
Gene Conversion
Pseudogenes
Recombinant DNA
Genome

Complexity in transcription control at the activation domain-Mediator interface

Balamotis, M. A., Pennella, M. A., Stevens, J. L., Wasylyk, B., Belmont, A. S. & Berk, A. J., May 5 2009, In : Science Signaling. 2, 69, p. ra20

Research output: Contribution to journalArticle

Ternary Complex Factors
Early Growth Response Protein 1
Transcription
Fibroblasts
Embryonic Stem Cells

Comprehensive phosphoprotein analysis of linker histone H1 from tetrahymena thermophila

Garcia, B. A., Joshi, S., Thomas, C. E., Chitta, R. K., Diaz, R. L., Busby, S. A., Andrews, P. C., Ogorzalek Loo, R. R., Shabanowitz, J., Kelleher, N. L., Mizzen, C. A., Allis, C. D. & Hunt, D. F., Sep 1 2006, In : Molecular and Cellular Proteomics. 5, 9, p. 1593-1609 17 p.

Research output: Contribution to journalArticle

Tetrahymena thermophila
Phosphorylation
Phosphoproteins
Histones
Mass spectrometry
Myosin Light Chains
Energy Transfer
Luminescence
Adenosine Diphosphate
Actins

Conformation and fibrillogenesis of Alzheimer Aβ peptides with selected substitution of charged residues

Fraser, P. E., McLachlan, D. R., Surewicz, W. K., Mizzen, C. A., Snow, A. D., Nguyen, J. T. & Kirschner, D. A., Jan 1 1994, In : Journal of Molecular Biology. 244, 1, p. 64-73 10 p.

Research output: Contribution to journalArticle

Amyloid
Peptides
Amyloidogenic Proteins
Alzheimer Disease
Aspartic Acid

Conservation and innovation in spiralian development

Henry, J. J. & Martindale, M. Q., May 15 1999, In : Hydrobiologia. 402, p. 255-265 11 p.

Research output: Contribution to journalArticle

early development
innovation
blastomeres
Annelida
molecular genetics

Conservation of gene expression during embryonic lens formation and cornea-lens transdifferentiation in Xenopus laevis

Schaefer, J. J., Oliver, G. & Henry, J. J., Aug 19 1999, In : Developmental Dynamics. 215, 4, p. 308-318 11 p.

Research output: Contribution to journalArticle

Xenopus laevis
Cornea
Lenses
Gene Expression
Embryonic Induction

Conservation of the spiralian developmental program: Cell lineage of the nemertean, Cerebratulus lacteus

Henry, J. J. & Martindale, M. Q., Sep 15 1998, In : Developmental Biology. 201, 2, p. 253-269 17 p.

Research output: Contribution to journalArticle

Blastomeres
Cell Lineage
Ectoderm
Larva
Embryonic Structures

Conserved mechanism of dorsoventral axis determination in equal-cleaving spiralians

Henry, J. J., Jan 1 2002, In : Developmental Biology. 248, 2, p. 343-355 13 p.

Research output: Contribution to journalArticle

Mollusca
Embryonic Structures
Somatostatin-Secreting Cells
Mixed Function Oxygenases
Cytochrome P-450 Enzyme System
Methoxsalen
Genes
Insect Genes
Methoxsalen
Pheromones
allelochemicals
Transcription
cytochrome P-450

Construction of a Dimeric Repressor: Dissection of Subunit Interfaces in Lac Repressor

Chen, J., Matthews, K. S., Surendran, R. & Lee, J. C., Feb 1 1994, In : Biochemistry. 33, 5, p. 1234-1241 8 p.

Research output: Contribution to journalArticle

Lac Repressors
Dissection
Leucine
Dimers
Lactose

Contribution of clinically derived mutations in ERG11 to azole resistance in Candida albicans

Flowers, S. A., Colón, B., Whaley, S. G., Schuler, M. A. & David Rogers, P., Jan 1 2015, In : Antimicrobial Agents and Chemotherapy. 59, 1, p. 450-460 11 p.

Research output: Contribution to journalArticle

Azoles
Amino Acid Substitution
Candida albicans
Fluconazole
Mutation