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Task-related differential expression of four cytochrome P450 genes in honeybee appendages

Mao, W., Schuler, M. A. & Berenbaum, M. R., Oct 1 2015, In : Insect Molecular Biology. 24, 5, p. 582-588 7 p.

Research output: Contribution to journalArticle

appendages
cytochrome P-450
Cytochrome P-450 Enzyme System
honey bees
Leg

Tbx18 Regulates the Differentiation of Periductal Smooth Muscle Stroma and the Maintenance of Epithelial Integrity in the Prostate

Bolt, C. C., Negi, S., Guimarães-Camboa, N., Zhang, H., Troy, J. M., Lu, X., Kispert, A., Evans, S. M. & Stubbs, L., Jan 1 2016, In : PloS one. 11, 4, p. e0154413

Research output: Contribution to journalArticle

smooth muscle
Smooth Muscle
Muscle
Prostate
sinuses

Temporal association of ORCA/LRWD1 to late-firing origins during G1 dictates heterochromatin replication and organization

Wang, Y., Khan, A., Marks, A. B., Smith, O. K., Giri, S., Lin, Y. C., Creager, R., MacAlpine, D. M., Prasanth, K. V., Aladjem, M. I. & Prasanth, S. G., Mar 17 2017, In : Nucleic acids research. 45, 5, p. 2490-2502 13 p.

Research output: Contribution to journalArticle

Heterochromatin
Chromatin
Origin Recognition Complex
DNA Replication
S Phase

Temporal dynamics of neurogenomic plasticity in response to social interactions in male threespined sticklebacks

Bukhari, S. A., Saul, M. C., Seward, C. H., Zhang, H., Bensky, M., James, N., Zhao, S. D., Chandrasekaran, S., Stubbs, L. & Bell, A. M., Jul 2017, In : PLoS genetics. 13, 7, e1006840.

Research output: Contribution to journalArticle

Smegmamorpha
Gasterosteidae
Interpersonal Relations
plasticity
chromatin

Temporally and spectrally resolved imaging microscopy of lanthanide chelates

Vereb, G., Jares-Erijman, E., Selvin, P. R. & Jovin, T. M., May 1998, In : Biophysical journal. 74, 5, p. 2210-2222 13 p.

Research output: Contribution to journalArticle

Lanthanoid Series Elements
Microscopy
Fluorescence
Fluorescence Resonance Energy Transfer
Xenon

Temporally restricted role of retinal PACAP: Integration of the phase-advancing light signal to the SCN

Beaulé, C., Mitchell, J. W., Lindberg, P. T., Damadzic, R., Eiden, L. E. & Gillette, M. U., Apr 1 2009, In : Journal of biological rhythms. 24, 2, p. 126-134 9 p.

Research output: Contribution to journalArticle

Suprachiasmatic Nucleus
Adenylyl Cyclases
Light
Peptides
Circadian Clocks

Textural guidance cues for controlling process outgrowth of mammalian neurons

Hanson, J. N., Motala, M. J., Heien, M. L., Gillette, M., Sweedler, J. & Nuzzo, R. G., Jan 1 2009, In : Lab on a chip. 9, 1, p. 122-131 10 p.

Research output: Contribution to journalArticle

Neurons
Cues
Growth
Aplysia
Substrates

The actin filament bundling protein α-actinin-4 actually suppresses actin stress fibers by permitting actin turnover

Kemp, J. P. & Brieher, W. M., Jan 1 2018, In : Journal of Biological Chemistry. 293, 37, p. 14520-14533 14 p.

Research output: Contribution to journalArticle

Actinin
Stress Fibers
Actins
Tropomyosin
Fibers

The assembly of a spliceosomal small nuclear ribonucleoprotein particle

Patel, S. B. & Bellini, M., Nov 28 2008, In : Nucleic acids research. 36, 20, p. 6482-6493 12 p.

Research output: Contribution to journalArticle

Small Nuclear Ribonucleoproteins
U4-U6 Small Nuclear Ribonucleoproteins
U5 Small Nuclear Ribonucleoproteins
U2 Small Nuclear Ribonucleoproteins
U1 Small Nuclear Ribonucleoproteins

The cell lineage of a polyclad turbellarian embryo reveals close similarity to coelomate spiralians

Boyer, B. C., Henry, J. J. & Martindale, M. Q., Dec 1 1998, In : Developmental Biology. 204, 1, p. 111-123 13 p.

Research output: Contribution to journalArticle

Cell Lineage
Ectoderm
Embryonic Structures
Mesoderm
Platyhelminths

The cell lineage of the polyplacophoran, Chaetopleura apiculata: Variation in the spiralian program and implications for molluscan evolution

Henry, J. Q., Okusu, A. & Martindale, M. Q., Aug 1 2004, In : Developmental Biology. 272, 1, p. 145-160 16 p.

Research output: Contribution to journalArticle

Cell Lineage
Polyplacophora
Mollusca
Larva
Cephalopoda

The Cellular and Molecular Bases of Vertebrate Lens Regeneration

Henry, J. J., Jan 1 2003, In : International Review of Cytology. 228, p. 195-265 71 p.

Research output: Contribution to journalArticle

Lenses
Vertebrates
Regeneration
Fibroblast Growth Factors
Retinoids

The cellular world according to Hsp90

Richter, K., Hendershot, L. M. & Freeman, B. C., Feb 1 2007, In : Nature Structural and Molecular Biology. 14, 2, p. 90-94 5 p.

Research output: Contribution to journalArticle

Molecular Chaperones
Germany

The conserved Est1 protein stimulates telomerase DNA extension activity

DeZwaan, D. C. & Freeman, B. C., Oct 13 2009, In : Proceedings of the National Academy of Sciences of the United States of America. 106, 41, p. 17337-17342 6 p.

Research output: Contribution to journalArticle

Telomerase
DNA
Proteins
Holoenzymes
Saccharomycetales

The cytochrome P450 gene family CYP157 does not contain EXXR in the K-helix reducing the absolute conserved P450 residues to a single cysteine

Rupasinghe, S., Schuler, M. A., Kagawa, N., Yuan, H., Lei, L., Zhao, B., Kelly, S. L., Waterman, M. R. & Lamb, D. C., Nov 27 2006, In : FEBS Letters. 580, 27, p. 6338-6342 5 p.

Research output: Contribution to journalArticle

Streptomyces coelicolor
Mutagenesis
Site-Directed Mutagenesis
Heme
Cytochrome P-450 Enzyme System
Sea Urchins
Embryonic Structures
Cell Communication
Embryonic Development
Research

The DNA end-binding protein Ku regulates silencing at the internal HML and HMR loci in Saccharomyces cerevisiae

Vandre, C. L., Kamakaka, R. T. & Rivier, D. H., Nov 1 2008, In : Genetics. 180, 3, p. 1407-1418 12 p.

Research output: Contribution to journalArticle

Telomere
DNA-Binding Proteins
Saccharomyces cerevisiae
Yeasts
Heterochromatin

The DNA sequence and biology of human chromosome 19

Grimwood, J., Gordon, L. A., Olsen, A., Terry, A., Schmutz, J., Lamerdin, J., Hellsten, U., Goodstein, D., Couronne, O., Tran-Gyamil, M., Aerts, A., Altherr, M., Ashworth, L., Bajorek, E., Black, S., Branscomb, E., Caenepeel, S., Carrano, A., Caoile, C., Chan, Y. M. & 78 others, Christensen, M., Cleland, C. A., Copeland, A., Dalin, E., Dehal, P., Denys, M., Detter, J. C., Escobar, J., Flowers, D., Fotopolus, D., Garcia, C., Georgescu, A. M., Glavina, T., Gomez, M., Gonzales, E., Groza, M., Hammon, N., Hawkins, T., Haydu, L., Ho, I., Huang, W., Israni, S., Jett, J., Kadner, K., Kimball, H., Kobayashi, A., Larionov, V., Leem, S. H., Lopez, F., Lou, Y., Lowry, S., Malfatti, S., Martinez, D., McCready, P., Medina, C., Morgan, J., Nelson, K., Nolan, M., Ovcharenko, I., Pitluck, S., Pollard, M., Popkie, A. P., Predki, P., Quan, G., Ramirez, L., Rash, S., Retterer, J., Rodriguez, A., Rogers, S., Salamov, A., Salazar, A., She, X., Smith, D., Slezak, T., Solovyev, V., Thayer, N., Tice, H., Tsai, M., Ustaszewska, A., Vo, N., Wagner, M., Wheeler, J., Wu, K., Xie, G., Yang, J., Dubchak, I., Furey, T. S., DeJong, P., Dickson, M., Gordon, D., Eichler, E. E., Pennacchio, L. A., Richardson, P., Stubbs, L., Rokhsar, D. S., Myers, R. M., Rubin, E. M. & Lucas, S. M., Apr 1 2004, In : Nature. 428, 6982, p. 529-535 7 p.

Research output: Contribution to journalArticle

Chromosomes, Human, Pair 19
Human Chromosomes
Genes
Chromosomes
Takifugu

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)

Ming, R., Hou, S., Feng, Y., Yu, Q., Dionne-Laporte, A., Saw, J. H., Senin, P., Wang, W., Ly, B. V., Lewis, K. L. T., Salzberg, S. L., Feng, L., Jones, M. R., Skelton, R. L., Murray, J. E., Chen, C., Qian, W., Shen, J., Du, P., Eustice, M. & 65 others, Tong, E., Tang, H., Lyons, E., Paull, R. E., Michael, T. P., Wall, K., Rice, D. W., Albert, H., Wang, M. L., Zhu, Y. J., Schatz, M., Nagarajan, N., Acob, R. A., Guan, P., Blas, A., Wai, C. M., Ackerman, C. M., Ren, Y., Liu, C., Wang, J., Wang, J., Na, J. K., Shakirov, E. V., Haas, B., Thimmapuram, J., Nelson, D., Wang, X., Bowers, J. E., Gschwend, A. R., Delcher, A. L., Singh, R., Suzuki, J. Y., Tripathi, S., Neupane, K., Wei, H., Irikura, B., Paidi, M., Jiang, N., Zhang, W., Presting, G., Windsor, A., Navajas-Pérez, R., Torres, M. J., Feltus, F. A., Porter, B., Li, Y., Burroughs, A. M., Luo, M. C., Liu, L., Christopher, D. A., Mount, S. M., Moore, P. H., Sugimura, T., Jiang, J., Schuler, M. A., Friedman, V., Mitchell-Olds, T., Shippen, D. E., Depamphilis, C. W., Palmer, J. D., Freeling, M., Paterson, A. H., Gonsalves, D., Wang, L. & Alam, M., Apr 24 2008, In : Nature. 452, 7190, p. 991-996 6 p.

Research output: Contribution to journalArticle

Carica
Fruit
Genome
Angiosperms
Genes

The Drosophila Duox maturation factor is a key component of a positive feedback loop that sustains regeneration signaling

Khan, S. J., Abidi, S. N. F., Skinner, A., Tian, Y. & Smith-Bolton, R. K., Jul 2017, In : PLoS genetics. 13, 7, e1006937.

Research output: Contribution to journalArticle

Drosophila
maturation
Regeneration
regeneration
imaginal discs

The dynamics of homologous chromosome pairing during male Drosophila meiosis

Vazquez, J., Belmont, A. S. & Sedat, J. W., Sep 3 2002, In : Current Biology. 12, 17, p. 1473-1483 11 p.

Research output: Contribution to journalArticle

Chromosome Pairing
chromosome pairing
Meiosis
Chromosomes
meiosis

The embryonic lethality of homozygous lethal yellow mice (A(y)/A(y)) is associated with the disruption of a novel RNA-binding protein

Michaud, E. J., Bultman, S. J., Stubbs, L. J. & Woychik, R. P., Jan 1 1993, In : Genes and Development. 7, 7 A, p. 1203-1213 11 p.

Research output: Contribution to journalArticle

RNA-Binding Proteins
Genes
Messenger RNA
Mutation
Gene Expression

The establishment of embryonic axial properties in the nemertean, Cerebratulus lacteus

Henry, J. Q. & Martindale, M. Q., Dec 15 1996, In : Developmental Biology. 180, 2, p. 713-721 9 p.

Research output: Contribution to journalArticle

Embryonic Structures
Larva
Zygote
Cell Lineage

The facultative heterochromatin of the inactive X chromosome has a distinctive condensed ultrastructure

Rego, A., Sinclair, P. B., Tao, W., Kireev, I. & Belmont, A. S., Apr 1 2008, In : Journal of cell science. 121, 7, p. 1119-1127 9 p.

Research output: Contribution to journalArticle

Heterochromatin
X Chromosome
Nuclear Envelope
Sex Chromatin
Euchromatin

The G-protein-coupled receptor, GPR84, is important for eye development in Xenopus laevis

Perry, K. J., Johnson, V. R., Malloch, E. L., Fukui, L., Wever, J., Thomas, A. G., Hamilton, P. W. & Henry, J. J., Nov 1 2010, In : Developmental Dynamics. 239, 11, p. 3024-3037 14 p.

Research output: Contribution to journalArticle

Xenopus laevis
G-Protein-Coupled Receptors
Lenses
Retina
Cornea

The Hsp82 molecular chaperone promotes a switch between unextendable and extendable telomere states

DeZwaan, D. C., Toogun, O. A., Echtenkamp, F. J. & Freeman, B. C., Jul 1 2009, In : Nature Structural and Molecular Biology. 16, 7, p. 711-716 6 p.

Research output: Contribution to journalArticle

Molecular Chaperones
Telomere
Telomerase
Yeasts
DNA

The Hsp90 molecular chaperone modulates multiple telomerase activities

Toogun, O. A., DeZwaan, D. C. & Freeman, B. C., Jan 1 2008, In : Molecular and cellular biology. 28, 1, p. 457-467 11 p.

Research output: Contribution to journalArticle

Molecular Chaperones
Telomerase
DNA
Nucleotides
Yeasts

The Hsp90 Molecular Chaperone Regulates the Transcription Factor Network Controlling Chromatin Accessibility

Gvozdenov, Z., Bendix, L. D., Kolhe, J. & Freeman, B. C., Dec 6 2019, In : Journal of Molecular Biology. 431, 24, p. 4993-5003 11 p.

Research output: Contribution to journalArticle

Molecular Chaperones
Chromatin
Transcription Factors
DNA
Protein Folding

The human homolog of a mouse-imprinted gene, Peg3, maps to a zinc finger gene-rich region of human chromosome 19q13.4

Kim, J., Ashworth, L., Branscomb, E. & Stubbs, L., Jan 1 1997, In : Genome Research. 7, 5, p. 532-540 9 p.

Research output: Contribution to journalArticle

Zinc Fingers
Human Chromosomes
Genes
Chromosomes, Human, Pair 7
Proline

The hypothalamic suprachiasmatic nuclei: Circadian patterns of vasopressin secretion and neuronal activity in vitro

Gillette, M. U. & Reppert, S. M., Jul 1987, In : Brain Research Bulletin. 19, 1, p. 135-139 5 p.

Research output: Contribution to journalArticle

Suprachiasmatic Nucleus
Vasopressins
Long Evans Rats
Circadian Rhythm
Cerebrospinal Fluid

The lens regenerative competency of limbal vs. central regions of mature Xenopus cornea epithelium

Hamilton, P. W. & Henry, J. J., Nov 1 2016, In : Experimental Eye Research. 152, p. 94-99 6 p.

Research output: Contribution to journalArticle

Xenopus
Cornea
Lenses
Epithelium
Stem Cells

The mammalian circadian clock in the suprachiasmatic nuclei is reset in vitro by cAMP

Prosser, R. A. & Gillette, M. L., Jan 1 1989, In : Journal of Neuroscience. 9, 3, p. 1073-1081 9 p.

Research output: Contribution to journalArticle

Inbred Strains Rats
Circadian Clocks
Suprachiasmatic Nucleus
Circadian Rhythm
Cyclic AMP

The Mammalian Target of Rapamycin Regulates C2C12 Myogenesis via a Kinase-independent Mechanism

Erbay, E. & Chen, J., Sep 28 2001, In : Journal of Biological Chemistry. 276, 39, p. 36079-36082 4 p.

Research output: Contribution to journalArticle

Muscle Development
Sirolimus
Phosphotransferases
Muscle
Ribosomal Protein S6 Kinases

The maternal-zygotic transition and zygotic activation of the Mnemiopsis leidyi genome occurs within the first three cleavage cycles

Davidson, P. L., Koch, B. J., Schnitzler, C. E., Henry, J. Q., Martindale, M. Q., Baxevanis, A. D. & Browne, W. E., Nov 2017, In : Molecular reproduction and development. 84, 11, p. 1218-1229 12 p.

Research output: Contribution to journalArticle

Ctenophora
Mothers
Genome
Transcriptional Activation
Stored Messenger RNA

The Matured Eye of Xenopus laevis Tadpoles Produces Factors That Elicit a Lens-Forming Response in Embryonic Ectoderm

Henry, J. J. & Mittleman, J. M., Sep 1995, In : Developmental Biology. 171, 1, p. 39-50 12 p.

Research output: Contribution to journalArticle

Ectoderm
Xenopus laevis
Lenses
Larva
Embryonic Induction

The mitotic kinesin CENP-E is a processive transport motor

Yardimci, H., Van Duffelen, M., Mao, Y., Rosenfeld, S. S. & Selvin, P. R., Apr 22 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 16, p. 6016-6021 6 p.

Research output: Contribution to journalArticle

Kinesin
Chromosomes, Human, 16-18
Hand
Adenosine Triphosphate
Cytoplasmic Vesicles

The mouse Col2a-1 gene is highly conserved and is linked to Int-1 on Chromosome 15

Cheah, K. S. E., Au, P. K. C., Lau, E. T., Little, P. F. R. & Stubbs, L., Sep 1 1991, In : Mammalian Genome. 1, 3, p. 171-183 13 p.

Research output: Contribution to journalArticle

Chromosomes, Human, Pair 15
Polyadenylation
Collagen Type II
Genes
Chickens

The natural product cucurbitacin e inhibits depolymerization of actin filaments

Sörensen, P. M., Iacob, R. E., Fritzsche, M., Engen, J. R., Brieher, W. M., Charras, G. & Eggert, U. S., Sep 21 2012, In : ACS chemical biology. 7, 9, p. 1502-1508 7 p.

Research output: Contribution to journalArticle

Cucurbitacins
Depolymerization
Biological Products
Actin Cytoskeleton
Actins

The neuromodulatory response: Integrating second messenger pathways

Gillette, R., Gillette, M. L., Green, D. J. & Huang, R. C., Dec 1 1989, In : Integrative and Comparative Biology. 29, 4, p. 1275-1286 12 p.

Research output: Contribution to journalArticle

second messengers
neurons
ions

The non-receptor tyrosine kinase Lyn controls neutrophil adhesion by recruiting the CrkL-C3G complex and activating Rap1 at the leading edge

He, Y., Kapoor, A., Cook, S., Liu, S., Xiang, Y., Rao, C. V., Kenis, P. J. A. & Wang, F., Jul 1 2011, In : Journal of cell science. 124, 13, p. 2153-2164 12 p.

Research output: Contribution to journalArticle

Protein-Tyrosine Kinases
Chemotaxis
Neutrophils
Guanine Nucleotide-Releasing Factor 2
Cell-Matrix Junctions

The nuclear and DNA-associated molecular chaperone network

Gvozdenov, Z., Kolhe, J. & Freeman, B. C., Oct 2019, In : Cold Spring Harbor Perspectives in Biology. 11, 10, a034009.

Research output: Contribution to journalArticle

Open Access
Molecular Chaperones
DNA
Intranuclear Inclusion Bodies
Proteins
Proteome

The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation

Tripathi, V., Ellis, J. D., Shen, Z., Song, D. Y., Pan, Q., Watt, A. T., Freier, S. M., Bennett, C. F., Sharma, A., Bubulya, P. A., Blencowe, B. J., Prasanth, S. G. & Kannanganattu, P. K., Sep 1 2010, In : Molecular cell. 39, 6, p. 925-938 14 p.

Research output: Contribution to journalArticle

Untranslated RNA
Alternative Splicing
Serine
Arginine
Phosphorylation

The origin of mesoderm in the equal-cleaving nemertean worm Cerebratulus lacteus

Henry, J. Q. & Martindale, M. Q., Jan 1 1996, In : Biological Bulletin. 191, 2, p. 286-288 3 p.

Research output: Contribution to journalArticle

The p23 Molecular Chaperone and GCN5 Acetylase Jointly Modulate Protein-DNA Dynamics and Open Chromatin Status

Zelin, E., Zhang, Y., Toogun, O. A., Zhong, S. & Freeman, B. C., Nov 9 2012, In : Molecular cell. 48, 3, p. 459-470 12 p.

Research output: Contribution to journalArticle

Acetylesterase
Molecular Chaperones
Chromatin
DNA
Proteins

The p23 molecular chaperone promotes functional telomerase complexes through DNA dissociation

Toogun, O. A., Zeiger, W. & Freeman, B. C., Apr 3 2007, In : Proceedings of the National Academy of Sciences of the United States of America. 104, 14, p. 5765-5770 6 p.

Research output: Contribution to journalArticle

Molecular Chaperones
Telomerase
Telomere
DNA
Telomere Homeostasis

The PI3K-Akt pathway inhibits senescence and promotes self-renewal of human skin-derived precursors in vitro

Liu, S., Liu, S., Wang, X., Zhou, J., Cao, Y., Wang, F. & Duan, E., Aug 1 2011, In : Aging Cell. 10, 4, p. 661-674 14 p.

Research output: Contribution to journalArticle

Foreskin
Phosphatidylinositol 3-Kinases
Skin
Stem Cells
Glycogen Synthase Kinase 3

The preRC protein ORCA organizes heterochromatin by assembling histone H3 lysine 9 methyltransferases on chromatin

Giri, S., Aggarwal, V., Pontis, J., Shen, Z., Chakraborty, A., Khan, A., Mizzen, C., Prasanth, K. V., Ait-Si-Ali, S., Ha, T. & Prasanth, S. G., Apr 29 2015, In : eLife. 2015, 4, p. 1-54 54 p.

Research output: Contribution to journalArticle

Heterochromatin
Methyltransferases
Histones
Lysine
Chromatin

The radiata and the evolutionary origins of the bilaterian body plan

Martindale, M. Q., Finnerty, J. R. & Henry, J. J., Oct 14 2002, In : Molecular Phylogenetics and Evolution. 24, 3, p. 358-365 8 p.

Research output: Contribution to journalArticle

Ctenophora
Cnidaria
ancestry
animal
plan

The recruitment of the U5 snRNP to nascent transcripts requires internal loop 1 of U5 snRNA

Kim, R., Paschedag, J., Novikova, N. & Bellini, M., Dec 1 2012, In : Chromosome Research. 20, 8, p. 943-951 9 p.

Research output: Contribution to journalArticle

U5 Small Nuclear Ribonucleoproteins
Oocytes
Spliceosomes
U5 small nuclear RNA
RNA Precursors

The relative intranuclear positions of barr bodies in XXX non-transformed human fibroblasts

Belmont, A. S., Bignone, F. & Ts'O, P. O. P., Jul 1986, In : Experimental Cell Research. 165, 1, p. 165-179 15 p.

Research output: Contribution to journalArticle

Sex Chromatin
Fibroblasts
Interphase
Chromosomes
Growth