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2008

Actin disassembly by cofilin, coronin, and Aip1 occurs in bursts and is inhibited by barbed-end cappers

Hao, Y. K., Charras, G. T., Mitchison, T. J. & Brieher, W. M., Jul 28 2008, In : Journal of Cell Biology. 182, 2, p. 341-353 13 p.

Research output: Contribution to journalArticle

Aflatoxin B1 detoxification by CYP321A1 in Helicoverpa zea

Niu, G., Wen, Z., Rupasinghe, S. G., Ren, S. Z., Berenbaum, M. R. & Schuler, M. A., Sep 1 2008, In : Archives of Insect Biochemistry and Physiology. 69, 1, p. 32-45 14 p.

Research output: Contribution to journalArticle

A quantitative analysis of contractility in active cytoskeletal protein networks

Bendix, P. M., Koenderink, G. H., Cuvelier, D., Dogic, Z., Koeleman, B. N., Brieher, W. M., Field, C. M., Mahadevan, L. & Weitz, D. A., Apr 15 2008, In : Biophysical journal. 94, 8, p. 3126-3136 11 p.

Research output: Contribution to journalArticle

Certain and progressive methylation of histone H4 at lysine 20 during the cell cycle

Pesavento, J. J., Yang, H., Kelleher, N. L. & Mizzen, C. A., Jan 1 2008, In : Molecular and cellular biology. 28, 1, p. 468-486 19 p.

Research output: Contribution to journalArticle

Combinatorial modification of human histone H4 quantitated by two-dimensional liquid chromatography coupled with top down mass spectrometry

Pesavento, J. J., Bullock, C. R., LeDuc, R. D., Mizzen, C. A. & Kelleher, N. L., May 30 2008, In : Journal of Biological Chemistry. 283, 22, p. 14927-14937 11 p.

Research output: Contribution to journalArticle

Comparative molecular modeling of Anopheles gambiae CYP6Z1, a mosquito P450 capable of metabolizing DDT

Chiu, T. L., Wen, Z., Rupasinghe, S. G. & Schuler, M. A., Jul 1 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 26, p. 8855-8860 6 p.

Research output: Contribution to journalArticle

Coronin-1A Stabilizes F-Actin by Bridging Adjacent Actin Protomers and Stapling Opposite Strands of the Actin Filament

Galkin, V. E., Orlova, A., Brieher, W., Kueh, H. Y., Mitchison, T. J. & Egelman, E. H., Feb 22 2008, In : Journal of Molecular Biology. 376, 3, p. 607-613 7 p.

Research output: Contribution to journalArticle

Crystal structures of substrate-free and retinoic acid-bound cyanobacterial cytochrome P450 CYP120A1

Kühnel, K., Ke, N., Cryle, M. J., Sligar, S. G., Schuler, M. A. & Schlichting, I., Jun 24 2008, In : Biochemistry. 47, 25, p. 6552-6559 8 p.

Research output: Contribution to journalArticle

Dynamic stabilization of actin filaments

Hao, Y. K., Brieher, W. M. & Mitchison, T. J., Oct 28 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 43, p. 16531-16536 6 p.

Research output: Contribution to journalArticle

Open Access

Ectopic histone H3S10 phosphorylation causes chromatin structure remodeling in Drosophila

Deng, H., Bao, X., Cai, W., Blacketer, M. J., Belmont, A. S., Girton, J., Johansen, J. & Johansen, K. M., Feb 1 2008, In : Development. 135, 4, p. 699-705 7 p.

Research output: Contribution to journalArticle

Expression of fragile X mental retardation protein within the vocal control system of developing and adult male zebra finches

Winograd, C., Clayton, D. & Ceman, S., Nov 11 2008, In : Neuroscience. 157, 1, p. 132-142 11 p.

Research output: Contribution to journalArticle

Extent of Voltage Sensor Movement during Gating of Shaker K+ Channels

Posson, D. J. & Selvin, P. R., Jul 10 2008, In : Neuron. 59, 1, p. 98-109 12 p.

Research output: Contribution to journalArticle

Forkhead box protein O1 negatively regulates skeletal myocyte differentiation through degradation of mammalian target of rapamycin pathway components

Wu, A. L., Kim, J. H., Zhang, C., Unterman, T. G. & Chen, J., Mar 1 2008, In : Endocrinology. 149, 3, p. 1407-1414 8 p.

Research output: Contribution to journalArticle

Germline translocations in mice: Unique tools for analyzing gene function and long-distance regulatory mechanisms

Elso, C., Lu, X., Morrison, S., Tarver, A., Thompson, H., Thurkow, H., Yamada, N. A. & Stubbs, L., Sep 25 2008, In : Journal of the National Cancer Institute - Monographs. 39, p. 91-95 5 p.

Research output: Contribution to journalArticle

Identification and characterization of topoisomerase II inhibitory peptides from soy protein hydrolysates

Wang, W., Rupasinghe, S. G., Schuler, M. A. & De Mejia, E. G., Aug 13 2008, In : Journal of Agricultural and Food Chemistry. 56, 15, p. 6267-6277 11 p.

Research output: Contribution to journalArticle

Interpreting top-down mass spectra using spectral alignment

Frank, A. M., Pesavento, J. J., Mizzen, C. A., Kelleher, N. L. & Pevzner, P. A., Apr 1 2008, In : Analytical chemistry. 80, 7, p. 2499-2505 7 p.

Research output: Contribution to journalArticle

In vivo immunogold labeling confirms large-scale chromatin folding motifs

Kireev, I., Lakonishok, M., Liu, W., Joshi, V. N., Powell, R. & Belmont, A. S., Apr 1 2008, In : Nature Methods. 5, 4, p. 311-313 3 p.

Research output: Contribution to journalArticle

Jones phase microscopy of transparent and anisotropic samples

Wang, Z., Millet, L. J., Gillette, M. U. & Popescu, G., Jun 1 2008, In : Optics Letters. 33, 11, p. 1270-1272 3 p.

Research output: Contribution to journalArticle

Live images of RNA polymerase II transcription units

Patel, S., Novikova, N., Beenders, B., Austin, C. & Bellini, M., Apr 1 2008, In : Chromosome Research. 16, 2, p. 223-232 10 p.

Research output: Contribution to journalArticle

MAPK activation and the specification of the D quadrant in the gastropod mollusc, Crepidula fornicata

Henry, J. J. & Perry, K. J., Jan 1 2008, In : Developmental Biology. 313, 1, p. 181-195 15 p.

Research output: Contribution to journalArticle

Mass spectrometry-based discovery of circadian peptides

Hatcher, N. G., Atkins, N., Annangudi, S. P., Forbes, A. J., Kelleher, N. L., Gillette, M. U. & Sweedler, J. V., Aug 26 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 34, p. 12527-12532 6 p.

Research output: Contribution to journalArticle

Metabolism of myristicin by Depressaria pastinacella CYP6AB3v2 and inhibition by its metabolite

Mao, W., Zangerl, A. R., Berenbaum, M. R. & Schuler, M. A., Jun 1 2008, In : Insect Biochemistry and Molecular Biology. 38, 6, p. 645-651 7 p.

Research output: Contribution to journalArticle

Neuropeptidomics of the supraoptic rat nucleus

Bora, A., Annangudi, S. P., Millet, L. J., Rubakhin, S. S., Forbes, A. J., Kelleher, N. L., Gillette, M. U. & Sweedler, J. V., Nov 1 2008, In : Journal of Proteome Research. 7, 11, p. 4992-5003 12 p.

Research output: Contribution to journalArticle

New 9- or 10-dentate luminescent lanthanide chelates

Ge, P. & Selvin, P. R., May 1 2008, In : Bioconjugate Chemistry. 19, 5, p. 1105-1111 7 p.

Research output: Contribution to journalArticle

p23/Sba1p protects against Hsp90 inhibitors independently of its intrinsic chaperone activity

Forafonov, F., Toogun, O. A., Grad, I., Suslova, E., Freeman, B. C. & Picard, D., May 1 2008, In : Molecular and cellular biology. 28, 10, p. 3446-3456 11 p.

Research output: Contribution to journalArticle

Phospholipase D1 is an effector of Rheb in the mTOR pathway

Sun, Y., Fang, Y., Yoon, M. S., Zhang, C., Roccio, M., Zwartkruis, F. J., Armstrong, M., Brown, H. A. & Chen, J., Jun 17 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 24, p. 8286-8291 6 p.

Research output: Contribution to journalArticle

PLD regulates myoblast differentiation through the mTOR-IGF2 pathway

Yoon, M. S. & Chen, J., Feb 1 2008, In : Journal of cell science. 121, 3, p. 282-289 8 p.

Research output: Contribution to journalArticle

Preferential dimethylation of histone H4 lysine 20 by Suv4-20

Yang, H., Pesavento, J. J., Starnes, T. W., Cryderman, D. E., Wallrath, L. L., Kelleher, N. L. & Mizzen, C. A., May 2 2008, In : Journal of Biological Chemistry. 283, 18, p. 12085-12092 8 p.

Research output: Contribution to journalArticle

Psf2 plays important roles in normal eye development in Xenopus laevis

Walter, B. E., Perry, K. J., Fukui, L., Malloch, E. L., Wever, J. & Henry, J. J., May 19 2008, In : Molecular Vision. 14, p. 906-921 16 p.

Research output: Contribution to journalArticle

RACK1 regulates directional cell migration by acting on gβγ at the interface with its effectors PLCβ and PI3Kγ

Chen, S., Lin, F., Myung, E. S., Wang, F., Shen, L. & Hamm, H. E., Sep 1 2008, In : Molecular biology of the cell. 19, 9, p. 3909-3922 14 p.

Research output: Contribution to journalArticle

Regulation of interleukin-6-induced hepatic insulin resistance by mammalian target of rapamycin through the STAT3-SOCS3 pathway

Kim, J. H., Jae, E. K., Liu, H. Y., Cao, W. & Chen, J., Jan 11 2008, In : Journal of Biological Chemistry. 283, 2, p. 708-715 8 p.

Research output: Contribution to journalArticle

S6K1 phosphorylates and regulates fragile X mental retardation protein (FMRP) with the neuronal protein synthesis-dependent mammalian target of rapamycin (mTOR) signaling cascade

Narayanan, U., Nalavadi, V., Nakamoto, M., Thomas, G., Ceman, S., Bassell, G. J. & Warren, S. T., Jul 4 2008, In : Journal of Biological Chemistry. 283, 27, p. 18478-18482 5 p.

Research output: Contribution to journalArticle

Self-Organized Podosomes Are Dynamic Mechanosensors

Collin, O., Na, S., Chowdhury, F., Hong, M., Shin, M. E., Wang, F. & Wang, N., Sep 9 2008, In : Current Biology. 18, 17, p. 1288-1294 7 p.

Research output: Contribution to journalArticle

The assembly of a spliceosomal small nuclear ribonucleoprotein particle

Patel, S. B. & Bellini, M., Nov 28 2008, In : Nucleic acids research. 36, 20, p. 6482-6493 12 p.

Research output: Contribution to journalArticle

The DNA end-binding protein Ku regulates silencing at the internal HML and HMR loci in Saccharomyces cerevisiae

Vandre, C. L., Kamakaka, R. T. & Rivier, D. H., Nov 1 2008, In : Genetics. 180, 3, p. 1407-1418 12 p.

Research output: Contribution to journalArticle

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)

Ming, R., Hou, S., Feng, Y., Yu, Q., Dionne-Laporte, A., Saw, J. H., Senin, P., Wang, W., Ly, B. V., Lewis, K. L. T., Salzberg, S. L., Feng, L., Jones, M. R., Skelton, R. L., Murray, J. E., Chen, C., Qian, W., Shen, J., Du, P., Eustice, M. & 65 others, Tong, E., Tang, H., Lyons, E., Paull, R. E., Michael, T. P., Wall, K., Rice, D. W., Albert, H., Wang, M. L., Zhu, Y. J., Schatz, M., Nagarajan, N., Acob, R. A., Guan, P., Blas, A., Wai, C. M., Ackerman, C. M., Ren, Y., Liu, C., Wang, J., Wang, J., Na, J. K., Shakirov, E. V., Haas, B., Thimmapuram, J., Nelson, D., Wang, X., Bowers, J. E., Gschwend, A. R., Delcher, A. L., Singh, R., Suzuki, J. Y., Tripathi, S., Neupane, K., Wei, H., Irikura, B., Paidi, M., Jiang, N., Zhang, W., Presting, G., Windsor, A., Navajas-Pérez, R., Torres, M. J., Feltus, F. A., Porter, B., Li, Y., Burroughs, A. M., Luo, M. C., Liu, L., Christopher, D. A., Mount, S. M., Moore, P. H., Sugimura, T., Jiang, J., Schuler, M. A., Friedman, V., Mitchell-Olds, T., Shippen, D. E., Depamphilis, C. W., Palmer, J. D., Freeling, M., Paterson, A. H., Gonsalves, D., Wang, L. & Alam, M., Apr 24 2008, In : Nature. 452, 7190, p. 991-996 6 p.

Research output: Contribution to journalArticle

The facultative heterochromatin of the inactive X chromosome has a distinctive condensed ultrastructure

Rego, A., Sinclair, P. B., Tao, W., Kireev, I. & Belmont, A. S., Apr 1 2008, In : Journal of cell science. 121, 7, p. 1119-1127 9 p.

Research output: Contribution to journalArticle

The Hsp90 molecular chaperone modulates multiple telomerase activities

Toogun, O. A., DeZwaan, D. C. & Freeman, B. C., Jan 1 2008, In : Molecular and cellular biology. 28, 1, p. 457-467 11 p.

Research output: Contribution to journalArticle

The mitotic kinesin CENP-E is a processive transport motor

Yardimci, H., Van Duffelen, M., Mao, Y., Rosenfeld, S. S. & Selvin, P. R., Apr 22 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 16, p. 6016-6021 6 p.

Research output: Contribution to journalArticle

The role of microtubule movement in bidirectional organelle transport

Kulić, I. M., Brown, A. E. X., Kim, H., Kural, C., Blehm, B., Selvin, P. R., Nelson, P. C. & Gelfand, V. I., Jul 22 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 29, p. 10011-10016 6 p.

Research output: Contribution to journalArticle

Tissue-specific expression and post-translational modification of histone H3 variants

Garcia, B. A., Thomas, C. E., Kelleher, N. L. & Mizzen, C. A., Oct 1 2008, In : Journal of Proteome Research. 7, 10, p. 4225-4236 12 p.

Research output: Contribution to journalArticle

β-Catenin is required for the establishment of vegetal embryonic fates in the nemertean, Cerebratulus lacteus

Henry, J. Q., Perry, K. J., Wever, J., Seaver, E. & Martindale, M. Q., May 1 2008, In : Developmental Biology. 317, 1, p. 368-379 12 p.

Research output: Contribution to journalArticle

2007

Allelochemical induction of cytochrome P450 monooxygenases and amelioration of xenobiotic toxicity in Helicoverpa zea

Zeng, R. S., Wen, Z., Niu, G., Schuler, M. A. & Berenbaum, M. R., Mar 1 2007, In : Journal of Chemical Ecology. 33, 3, p. 449-461 13 p.

Research output: Contribution to journalArticle

A Type III Secretion System in Vibrio cholerae Translocates a Formin/Spire Hybrid-like Actin Nucleator to Promote Intestinal Colonization

Tam, V. C., Serruto, D., Dziejman, M., Brieher, W. & Mekalanos, J. J., Apr 19 2007, In : Cell Host and Microbe. 1, 2, p. 95-107 13 p.

Research output: Contribution to journalArticle

Bound attractant at the leading vs. the trailing edge determines chemotactic prowess

Herzmark, P., Campbell, K., Wang, F., Wong, K., El-Samad, H., Groisman, A. & Bourne, H. R., Aug 14 2007, In : Proceedings of the National Academy of Sciences of the United States of America. 104, 33, p. 13349-13354 6 p.

Research output: Contribution to journalArticle

Caspase-11 regulates cell migration by promoting Aip1-Cofilin-mediated actin depolymerization

Li, J., Brieher, W. M., Scimone, M. L., Kang, S. J., Zhu, H., Yin, H., von Andrian, U. H., Mitchison, T. & Yuan, J., Mar 1 2007, In : Nature Cell Biology. 9, 3, p. 276-286 11 p.

Research output: Contribution to journalArticle

Characterization of neurohistone variants and post-translational modifications by electron capture dissociation mass spectrometry

Garcia, B. A., Siuti, N., Thomas, C. E., Mizzen, C. A. & Kelleher, N. L., Jan 1 2007, In : International Journal of Mass Spectrometry. 259, 1-3, p. 184-196 13 p.

Research output: Contribution to journalArticle