Research Output

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Review article
2011

The enzyme function initiative

Gerlt, J. A., Allen, K. N., Almo, S. C., Armstrong, R. N., Babbitt, P. C., Cronan, J. E., Dunaway-Mariano, D., Imker, H. J., Jacobson, M. P., Minor, W., Poulter, C. D., Raushel, F. M., Sali, A., Shoichet, B. K. & Sweedler, J. V., Nov 22 2011, In : Biochemistry. 50, 46, p. 9950-9962 13 p.

Research output: Contribution to journalReview article

The vaginal microbiome in health and disease

White, B. A., Creedon, D. J., Nelson, K. E. & Wilson, B. A., Oct 1 2011, In : Trends in Endocrinology and Metabolism. 22, 10, p. 389-393 5 p.

Research output: Contribution to journalReview article

Towards an evolutionary model of animal-associated microbiomes

Yeoman, C. J., Chia, N., Yildirim, S., Berg Miller, M. E., Kent, A., Stumpf, R., Leigh, S. R., Nelson, K. E., White, B. A. & Wilson, B. A., Mar 1 2011, In : Entropy. 13, 3, p. 570-594 25 p.

Research output: Contribution to journalReview article

Transcript profiling and RNA interference as tools to identify small molecule mechanisms and therapeutic potential

Palchaudhuri, R. & Hergenrother, P. J., Jan 21 2011, In : ACS chemical biology. 6, 1, p. 21-32 12 p.

Research output: Contribution to journalReview article

Triggered release from polymer capsules

Esser-Kahn, A. P., Odom, S. A., Sottos, N. R., White, S. R. & Moore, J. S., Jul 26 2011, In : Macromolecules. 44, 14, p. 5539-5553 15 p.

Research output: Contribution to journalReview article

Viscoelastic coagulation testing: Technology, applications, and limitations

McMichael, M. & Smith, S. A., Jun 1 2011, In : Veterinary Clinical Pathology. 40, 2, p. 140-153 14 p.

Research output: Contribution to journalReview article

2010

Advances in pediatric restless legs syndrome: Iron, genetics, diagnosis and treatment

Picchietti, M. A. & Picchietti, D. L., Aug 1 2010, In : Sleep Medicine. 11, 7, p. 643-651 9 p.

Research output: Contribution to journalReview article

Animal models of osteosarcoma

Fan, T. M., Aug 1 2010, In : Expert Review of Anticancer Therapy. 10, 8, p. 1327-1338 12 p.

Research output: Contribution to journalReview article

Antibiotic prescription pattern for viral respiratory illness in emergency room and ambulatory care settings

Ahmed, M. N., Muyot, M. M., Begum, S., Smith, P., Little, C. & Windemuller, F. J., Jun 1 2010, In : Clinical Pediatrics. 49, 6, p. 542-547 6 p.

Research output: Contribution to journalReview article

A review of new analytic techniques for quantifying symmetry in locomotion

Hsiao-Wecksler, E. T., Polk, J. D., Rosengren, K. S., Sosnoff, J. J. & Hong, S., Jun 1 2010, In : Symmetry. 2, 2, p. 1135-1155 21 p.

Research output: Contribution to journalReview article

Bedside and radiologic procedures in the critically ill obese patient

Olson, M. & Pohl, C., Oct 2010, In : Critical Care Clinics. 26, 4, p. 665-668 4 p.

Research output: Contribution to journalReview article

Capturing functional motions of membrane channels and transporters with molecular dynamics simulation

Shaikh, S. A., Wen, P. C., Enkavi, G., Huang, Z. & Tajkhorshid, E., Dec 1 2010, In : Journal of Computational and Theoretical Nanoscience. 7, 12, p. 2481-2500 20 p.

Research output: Contribution to journalReview article

Dynamic optical coherence elastography: A review

Liang, X., Crecea, V. & Boppart, S. A., Oct 1 2010, In : Journal of Innovative Optical Health Sciences. 3, 4, p. 221-233 13 p.

Research output: Contribution to journalReview article

Endometrial decidualization: Of mice and men

Ramathal, C. Y., Bagchi, I. C., Taylor, R. N. & Bagchi, M. K., Feb 15 2010, In : Seminars in Reproductive Medicine. 28, 1, p. 17-26 10 p.

Research output: Contribution to journalReview article

Exploring transmembrane diffusion pathways with molecular dynamics

Wang, Y., Shaikh, S. A. & Tajkhorshid, E., Jun 2010, In : Physiology. 25, 3, p. 142-154 13 p.

Research output: Contribution to journalReview article

Fishing for the hidden peptidome in health and disease (Drug Abuse)

Fricker, L. D. & Sweedler, J. V., Dec 1 2010, In : AAPS Journal. 12, 4, p. 679-682 4 p.

Research output: Contribution to journalReview article

Follow the leader: The use of leader peptides to guide natural product biosynthesis

Oman, T. J. & Van Der Donk, W. A., Jan 2010, In : Nature chemical biology. 6, 1, p. 9-18 10 p.

Research output: Contribution to journalReview article

Fourier transform light scattering (FTLS) of cells and tissues

Ding, H., Wang, Z., Nguyen, F. T., Boppart, S. A., Millet, L. J., Gillette, M. U., Liu, J., Boppart, M. D. & Popescu, G., Dec 1 2010, In : Journal of Computational and Theoretical Nanoscience. 7, 12, p. 2501-2511 11 p.

Research output: Contribution to journalReview article

Fourier transform light scattering of biological structure and dynamics

Ding, H., Berl, E., Wang, Z., Millet, L. J., Gillette, M. U., Liu, J., Boppart, M. & Popescu, G., Jul 1 2010, In : IEEE Journal on Selected Topics in Quantum Electronics. 16, 4, p. 909-918 10 p., 5443519.

Research output: Contribution to journalReview article

Gautreaux mothers and their children: An update

Deluca, S., Duncan, G. J., Keels, M. & Mendenhall, R. M., Dec 1 2010, In : Housing Policy Debate. 20, 1, p. 7-25 19 p.

Research output: Contribution to journalReview article

In situ uniaxial mechanical testing of small scale materials - A review

Kang, W., Rajagopalan, J. & Saif, M. T. A., Dec 2010, In : Nanoscience and Nanotechnology Letters. 2, 4, p. 282-287 6 p.

Research output: Contribution to journalReview article

Microscopic imaging and spectroscopy with scattered light

Boustany, N. N., Boppart, S. A. & Backman, V., Aug 15 2010, In : Annual Review of Biomedical Engineering. 12, p. 285-314 30 p.

Research output: Contribution to journalReview article

Nanofluidics in chemical analysis

Piruska, A., Gong, M., Sweedler, J. V. & Bohn, P. W., Mar 1 2010, In : Chemical Society Reviews. 39, 3, p. 1060-1072 13 p.

Research output: Contribution to journalReview article

Nanopore sensors for nucleic acid analysis

Venkatesan, B. M. & Bashir, R., Oct 2010, In : Nature Nanotechnology. 6, 10, p. 615-624 10 p.

Research output: Contribution to journalReview article

Recent insights into Pasteurella multocida toxin and other G-protein-modulating bacterial toxins

Wilson, B. A. & Ho, M., Aug 1 2010, In : Future Microbiology. 5, 8, p. 1185-1201 17 p.

Research output: Contribution to journalReview article

Substrate activation by iron superoxo intermediates

van der Donk, W. A., Krebs, C. & Bollinger, J. M., Dec 1 2010, In : Current Opinion in Structural Biology. 20, 6, p. 673-683 11 p.

Research output: Contribution to journalReview article

The balance between pre- and post-transfer editing in tRNA synthetases

Martinis, S. A. & Boniecki, M. T., Jan 21 2010, In : FEBS Letters. 584, 2, p. 455-459 5 p.

Research output: Contribution to journalReview article

Towards the use of microfluidics for individual embryo culture

Krisher, R. L. & Wheeler, M. B., Jan 13 2010, In : Reproduction, Fertility and Development. 22, 1, p. 32-39 8 p.

Research output: Contribution to journalReview article

2009

A review of the effects of growth hormone changes on symptoms of frailty in the elderly with chronic kidney disease

Abdel-Rahman, E. & Holley, J. L., Sep 1 2009, In : Seminars in Dialysis. 22, 5, p. 532-538 7 p.

Research output: Contribution to journalReview article

Biological approaches to aphasia treatment

Small, S. L. & Llano, D. A., Oct 26 2009, In : Current Neurology and Neuroscience Reports. 9, 6, p. 443-450 8 p.

Research output: Contribution to journalReview article

Biological Timekeeping

Gillette, M. U. & Abbott, S. M., Jun 1 2009, In : Sleep Medicine Clinics. 4, 2, p. 99-110 12 p.

Research output: Contribution to journalReview article

Biosynthesis of phosphonic and phosphinic acid natural products

Metcalf, W. W. & van der Donk, W. A., Jul 27 2009, In : Annual review of biochemistry. 78, p. 65-94 30 p.

Research output: Contribution to journalReview article

Calling heads from tails: the role of mathematical modeling in understanding cell polarization

Onsum, M. D. & Rao, C. V., Feb 1 2009, In : Current Opinion in Cell Biology. 21, 1, p. 74-81 8 p.

Research output: Contribution to journalReview article

Characterizing intercellular signaling peptides in drug addiction

Romanova, E. V., Hatcher, N. G., Rubakhin, S. S. & Sweedler, J. V., Jan 1 2009, In : Neuropharmacology. 56, SUPPL. 1, p. 196-204 9 p.

Research output: Contribution to journalReview article

Cognitive control mechanisms, emotion and memory: A neural perspective with implications for psychopathology

Banich, M. T., Mackiewicz, K. L., Depue, B. E., Whitmer, A. J., Miller, G. A. & Heller, W., May 1 2009, In : Neuroscience and Biobehavioral Reviews. 33, 5, p. 613-630 18 p.

Research output: Contribution to journalReview article

Exercise, Inflammation, and Innate Immunity

Woods, J. A., Vieira, V. J. & Keylock, K. T., May 1 2009, In : Immunology and Allergy Clinics of North America. 29, 2, p. 381-393 13 p.

Research output: Contribution to journalReview article

Exercise and respiratory tract viral infections

Martin, S. A., Pence, B. D. & Woods, J. A., Oct 1 2009, In : Exercise and Sport Sciences Reviews. 37, 4, p. 157-164 8 p.

Research output: Contribution to journalReview article

Imaging engineered tissues using structural and functional optical coherence tomography

Liang, X., Graf, B. W. & Boppart, S. A., Nov 1 2009, In : Journal of Biophotonics. 2, 11, p. 643-655 13 p.

Research output: Contribution to journalReview article

Industrial biotechnology: Tools and applications

Tang, W. L. & Zhao, H., Dec 1 2009, In : Biotechnology Journal. 4, 12, p. 1725-1739 15 p.

Research output: Contribution to journalReview article

Mechanobiology of the skeleton

Turner, C. H., Warden, S. J., Bellido, T., Plotkin, L. I., Kumar, N., Jasiuk, I., Danzig, J. & Robling, A. G., Apr 28 2009, In : Science Signaling. 2, 68, p. pt3

Research output: Contribution to journalReview article

Molecular dynamics simulations of membrane channels and transporters

Khalili-Araghi, F., Gumbart, J., Wen, P. C., Sotomayor, M., Tajkhorshid, E. & Schulten, K., Apr 1 2009, In : Current Opinion in Structural Biology. 19, 2, p. 128-137 10 p.

Research output: Contribution to journalReview article

Polyphosphate and omptins: Novel bacterial procoagulant agents

Yun, T. H. & Morrissey, J. H., Oct 1 2009, In : Journal of Cellular and Molecular Medicine. 13, 10, p. 4146-4153 8 p.

Research output: Contribution to journalReview article

Protein dynamics: From molecules, to interactions, to biology

Gruebele, M., Mar 1 2009, In : International journal of molecular sciences. 10, 3, p. 1360-1368 9 p.

Research output: Contribution to journalReview article

Protein engineering in designing tailored enzymes and microorganisms for biofuels production

Wen, F., Nair, N. U. & Zhao, H., Aug 1 2009, In : Current Opinion in Biotechnology. 20, 4, p. 412-419 8 p.

Research output: Contribution to journalReview article

Protein-membrane interactions: Blood clotting on nanoscale bilayers

Morrissey, J. H., Pureza, V., Davis-Harrison, R. L., Sligar, S. G., Rienstra, C. M., Kijac, A. Z., Ohkubo, Y. Z. & Tajkhorshid, E., Aug 4 2009, In : Journal of Thrombosis and Haemostasis. 7, SUPPL. 1, p. 169-172 4 p.

Research output: Contribution to journalReview article

Relational memory and the hippocampus: Representations and methods

Konkel, A. & Cohen, N. J., Dec 1 2009, In : Frontiers in Neuroscience. 3, SEP, Article 2.

Research output: Contribution to journalReview article

Soy isoflavones and virus infections

Andres, A., Donovan, S. M. & Kuhlenschmidt, M. S., Aug 1 2009, In : Journal of Nutritional Biochemistry. 20, 8, p. 563-569 7 p.

Research output: Contribution to journalReview article

Synthetic gene networks: the next wave in biotechnology?

Bhalerao, K. D., Jun 1 2009, In : Trends in Biotechnology. 27, 6, p. 368-374 7 p.

Research output: Contribution to journalReview article

T-cell receptor binding affinities and kinetics: impact on T-cell activity and specificity

Stone, J. D., Chervin, A. S. & Kranz, D. M., Feb 1 2009, In : Immunology. 126, 2, p. 165-176 12 p.

Research output: Contribution to journalReview article