Research Output 1972 2020

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Review article
2010

Endometrial decidualization: Of mice and men

Ramathal, C. Y., Bagchi, I. C., Taylor, R. N. & Bagchi, M. K., Feb 15 2010, In : Seminars in Reproductive Medicine. 28, 1, p. 17-26 10 p.

Research output: Contribution to journalReview article

Steroids
Endometrium
Embryonic Structures
Uterine Diseases
Progesterone Receptors

Evolution of cis-regulatory sequences in Drosophila.

He, X. & Sinha, S., 2010, In : Methods in molecular biology (Clifton, N.J.). 674, p. 283-296 14 p.

Research output: Contribution to journalReview article

Drosophila
Binding Sites
Sequence Analysis
Sequence Alignment
Statistical Models

Exploring transmembrane diffusion pathways with molecular dynamics

Wang, Y., Shaikh, S. A. & Tajkhorshid, E., Jun 2010, In : Physiology. 25, 3, p. 142-154 13 p.

Research output: Contribution to journalReview article

Molecular Dynamics Simulation
Gases
Lipids
Membranes
Water

Fishing for the hidden peptidome in health and disease (Drug Abuse)

Fricker, L. D. & Sweedler, J. V., Dec 1 2010, In : AAPS Journal. 12, 4, p. 679-682 4 p.

Research output: Contribution to journalReview article

Substance-Related Disorders
Health
Proteins
Peptides
Peptide Receptors

Follow the leader: The use of leader peptides to guide natural product biosynthesis

Oman, T. J. & van der Donk, W. A., Jan 2010, In : Nature chemical biology. 6, 1, p. 9-18 10 p.

Research output: Contribution to journalReview article

Protein Sorting Signals
Biological Products
Avalanches
Peptides
Post Translational Protein Processing

Fourier transform light scattering (FTLS) of cells and tissues

Ding, H., Wang, Z., Nguyen, F. T., Boppart, S. A., Millet, L. J., Gillette, M. U., Liu, J., Boppart, M. D. & Popescu, G., Dec 1 2010, In : Journal of Computational and Theoretical Nanoscience. 7, 12, p. 2501-2511 11 p.

Research output: Contribution to journalReview article

Light Scattering
Light scattering
Fourier transform
Fourier transforms
light scattering

Fourier transform light scattering of biological structure and dynamics

Ding, H., Berl, E., Wang, Z., Millet, L. J., Gillette, M. U., Liu, J., Boppart, M. & Popescu, G., Jul 1 2010, In : IEEE Journal on Selected Topics in Quantum Electronics. 16, 4, p. 909-918 10 p., 5443519.

Research output: Contribution to journalReview article

Light scattering
Fourier transforms
light scattering
Tissue
Dynamic light scattering

Gautreaux mothers and their children: An update

Deluca, S., Duncan, G. J., Keels, M. & Mendenhall, R., Dec 1 2010, In : Housing Policy Debate. 20, 1, p. 7-25 19 p.

Research output: Contribution to journalReview article

residential mobility
affluence
public housing
suburb
economics

Microscopic imaging and spectroscopy with scattered light

Boustany, N. N., Boppart, S. A. & Backman, V., Aug 15 2010, In : Annual Review of Biomedical Engineering. 12, p. 285-314 30 p.

Research output: Contribution to journalReview article

Spectrum Analysis
Spectroscopy
Tissue
Imaging techniques
Light

Nanofluidics in chemical analysis

Piruska, A., Gong, M., Sweedler, J. V. & Bohn, P. W., Mar 1 2010, In : Chemical Society Reviews. 39, 3, p. 1060-1072 13 p.

Research output: Contribution to journalReview article

Nanofluidics
Nanopores
Chemical analysis
Microfluidics
Microsensors

Nanomedicine strategies for molecular targets with MRI and optical imaging

Pan, D., Caruthers, S. D., Chen, J., Winter, P. M., Senpan, A., Schmieder, A. H., Wickline, S. A. & Lanza, G. M., Mar 1 2010, In : Future Medicinal Chemistry. 2, 3, p. 471-490 20 p.

Research output: Contribution to journalReview article

Nanomedicine
Optical Imaging
Molecular Imaging
Precision Medicine
Nanoparticles

Nanopore sensors for nucleic acid analysis

Venkatesan, B. M. & Bashir, R., Oct 2010, In : Nature Nanotechnology. 6, 10, p. 615-624 10 p.

Research output: Contribution to journalReview article

Nanopores
Nucleic acids
nucleic acids
Nucleic Acids
DNA

PET and SPECT in cardiovascular molecular imaging

Dobrucki, W. & Sinusas, A. J., Jan 1 2010, In : Nature Reviews Cardiology. 7, 1, p. 38-47 10 p.

Research output: Contribution to journalReview article

Molecular Imaging
Photons
Early Diagnosis
Biological Phenomena
Ventricular Remodeling

Recent insights into Pasteurella multocida toxin and other G-protein-modulating bacterial toxins

Wilson, B. A. & Ho, M., Aug 1 2010, In : Future Microbiology. 5, 8, p. 1185-1201 17 p.

Research output: Contribution to journalReview article

Bacterial Toxins
GTP-Binding Proteins
Pasteurella multocida
Escherichia coli
Yersinia

Substrate activation by iron superoxo intermediates

van der Donk, W. A., Krebs, C. & Bollinger, J. M., Dec 1 2010, In : Current Opinion in Structural Biology. 20, 6, p. 673-683 11 p.

Research output: Contribution to journalReview article

Iron
Oxygenases
Superoxides
Hydrogen
Oxidoreductases

The balance between pre- and post-transfer editing in tRNA synthetases

Martinis, S. A. & Boniecki, M. T., Jan 21 2010, In : FEBS Letters. 584, 2, p. 455-459 5 p.

Research output: Contribution to journalReview article

Amino Acyl-tRNA Synthetases
Transfer RNA
Catalytic Domain
Transfer RNA Aminoacylation
Aminoacylation

Towards the use of microfluidics for individual embryo culture

Krisher, R. L. & Wheeler, M. B., Jan 13 2010, In : Reproduction, Fertility and Development. 22, 1, p. 32-39 8 p.

Research output: Contribution to journalReview article

Microfluidics
embryo culture
embryo (animal)
Embryonic Structures
germ cells
2009

A review of the effects of growth hormone changes on symptoms of frailty in the elderly with chronic kidney disease

Abdel-Rahman, E. & Holley, J. L., Sep 1 2009, In : Seminars in Dialysis. 22, 5, p. 532-538 7 p.

Research output: Contribution to journalReview article

Chronic Renal Insufficiency
Growth Hormone
Quality of Life
Body Composition
Adipose Tissue

Biological approaches to aphasia treatment

Small, S. L. & Llano, D. A., Oct 26 2009, In : Current Neurology and Neuroscience Reports. 9, 6, p. 443-450 8 p.

Research output: Contribution to journalReview article

Aphasia
Stroke
Cell- and Tissue-Based Therapy
Cholinergic Agents
Neurotransmitter Agents

Biological Timekeeping

Gillette, M. L. & Abbott, S. M., Jun 1 2009, In : Sleep Medicine Clinics. 4, 2, p. 99-110 12 p.

Research output: Contribution to journalReview article

Biological Clocks
Circadian Clocks
Neurobiology
Periodicity
Sleep

Biosynthesis of phosphonic and phosphinic acid natural products

Metcalf, W. W. & van der Donk, W. A., Jul 27 2009, In : Annual review of biochemistry. 78, p. 65-94 30 p.

Research output: Contribution to journalReview article

Phosphinic Acids
Biosynthesis
Biological Products
Biochemistry
Phosphorous Acids

Calling heads from tails: the role of mathematical modeling in understanding cell polarization

Onsum, M. D. & Rao, C. V., Feb 1 2009, In : Current Opinion in Cell Biology. 21, 1, p. 74-81 8 p.

Research output: Contribution to journalReview article

Head
Saccharomycetales
Chemotaxis

Characterizing intercellular signaling peptides in drug addiction

Romanova, E. V., Hatcher, N. G., Rubakhin, S. & Sweedler, J. V., Jan 1 2009, In : Neuropharmacology. 56, SUPPL. 1, p. 196-204 9 p.

Research output: Contribution to journalReview article

Substance-Related Disorders
Peptides
National Institute on Drug Abuse (U.S.)
Technology
Immunochemistry

Cognitive control mechanisms, emotion and memory: A neural perspective with implications for psychopathology

Banich, M. T., Mackiewicz, K. L., Depue, B. E., Whitmer, A. J., Miller, G. A. & Heller, W., May 1 2009, In : Neuroscience and Biobehavioral Reviews. 33, 5, p. 613-630 18 p.

Research output: Contribution to journalReview article

Psychopathology
Emotions
Long-Term Memory
Short-Term Memory
Post-Traumatic Stress Disorders

Exercise, Inflammation, and Innate Immunity

Woods, J. A., Vieira, V. J. & Keylock, K. T., May 1 2009, In : Immunology and Allergy Clinics of North America. 29, 2, p. 381-393 13 p.

Research output: Contribution to journalReview article

Innate Immunity
Adipose Tissue
Anti-Inflammatory Agents
Inflammation
Cholinergic Agents

Exercise and respiratory tract viral infections

Martin, S. A., Pence, B. D. & Woods, J. A., Oct 1 2009, In : Exercise and Sport Sciences Reviews. 37, 4, p. 157-164 8 p.

Research output: Contribution to journalReview article

Virus Diseases
Respiratory Tract Infections
Immunosuppression
Hormones
Inflammation

Imaging engineered tissues using structural and functional optical coherence tomography

Liang, X., Graf, B. W. & Boppart, S. A., Nov 1 2009, In : Journal of Biophotonics. 2, 11, p. 643-655 13 p.

Research output: Contribution to journalReview article

Optical tomography
Optical Coherence Tomography
tomography
Tissue
Imaging techniques

Industrial biotechnology: Tools and applications

Tang, W. L. & Zhao, H., Dec 1 2009, In : Biotechnology Journal. 4, 12, p. 1725-1739 15 p.

Research output: Contribution to journalReview article

Biotechnology
Synthetic Biology
Industrial Waste
Metabolic Engineering
Protein Engineering

Mechanobiology of the skeleton

Turner, C. H., Warden, S. J., Bellido, T., Plotkin, L. I., Kumar, N., Jasiuk, I., Danzig, J. & Robling, A. G., Apr 28 2009, In : Science Signaling. 2, 68

Research output: Contribution to journalReview article

Biophysics
Skeleton
Bone
Bone and Bones
Osteocytes

Molecular dynamics simulations of membrane channels and transporters

Khalili-Araghi, F., Gumbart, J., Wen, P. C., Sotomayor, M., Tajkhorshid, E. & Schulten, K., Apr 1 2009, In : Current Opinion in Structural Biology. 19, 2, p. 128-137 10 p.

Research output: Contribution to journalReview article

Membrane Transport Proteins
Molecular Dynamics Simulation
Ion Channels
Aquaporins
Proteins

Polyphosphate and omptins: Novel bacterial procoagulant agents

Yun, T. H. & Morrissey, J. H., Oct 1 2009, In : Journal of Cellular and Molecular Medicine. 13, 10, p. 4146-4153 8 p.

Research output: Contribution to journalReview article

Polyphosphates
Yersinia pestis
Blood Coagulation
Plague
Plasminogen

Protein dynamics: From molecules, to interactions, to biology

Gruebele, M., Mar 1 2009, In : International journal of molecular sciences. 10, 3, p. 1360-1368 9 p.

Research output: Contribution to journalReview article

biology
proteins
Proteins
Molecules
molecules

Protein engineering in designing tailored enzymes and microorganisms for biofuels production

Wen, F., Nair, N. U. & Zhao, H., Aug 1 2009, In : Current Opinion in Biotechnology. 20, 4, p. 412-419 8 p.

Research output: Contribution to journalReview article

Protein Engineering
Biofuels
Microorganisms
Enzymes
Proteins

Protein-membrane interactions: Blood clotting on nanoscale bilayers

Morrissey, J. H., Pureza, V., Davis-Harrison, R. L., Sligar, S. G., Rienstra, C. M., Kijac, A. Z., Ohkubo, Y. Z. & Tajkhorshid, E., Aug 4 2009, In : Journal of Thrombosis and Haemostasis. 7, SUPPL. 1, p. 169-172 4 p.

Research output: Contribution to journalReview article

Blood Coagulation
Phospholipids
Membrane Proteins
Peptide Hydrolases
Membrane Microdomains

Relational memory and the hippocampus: Representations and methods

Konkel, A. & Cohen, N. J., Dec 1 2009, In : Frontiers in Neuroscience. 3, SEP, Article 2.

Research output: Contribution to journalReview article

Hippocampus
Research

Soy isoflavones and virus infections

Andres, A., Donovan, S. M. & Kuhlenschmidt, M. S., Aug 1 2009, In : Journal of Nutritional Biochemistry. 20, 8, p. 563-569 7 p.

Research output: Contribution to journalReview article

Isoflavones
Virus Diseases
Viruses
Flavonoids
Genistein

Synthetic gene networks: the next wave in biotechnology?

Bhalerao, K. D., Jun 1 2009, In : Trends in Biotechnology. 27, 6, p. 368-374 7 p.

Research output: Contribution to journalReview article

Synthetic Genes
Gene Regulatory Networks
Biotechnology
Genes
Synthetic Biology

T-cell receptor binding affinities and kinetics: impact on T-cell activity and specificity

Stone, J. D., Chervin, A. S. & Kranz, D. M., Feb 1 2009, In : Immunology. 126, 2, p. 165-176 12 p.

Research output: Contribution to journalReview article

T-Cell Antigen Receptor Specificity
T-Cell Antigen Receptor
Major Histocompatibility Complex
Peptides
T-Lymphocytes

Translation regulation of mRNAs by the fragile X family of proteins through the microRNA pathway

Cheever, A. & Ceman, S., Jan 1 2009, In : RNA Biology. 6, 2, p. 175-178 4 p.

Research output: Contribution to journalReview article

Protein Biosynthesis
MicroRNAs
Proteins
Fragile X Mental Retardation Protein
Phosphorylation
2008

Advantages and application of label-free detection assays in drug screening

Cunningham, B. T. & Laing, L. G., Aug 1 2008, In : Expert Opinion on Drug Discovery. 3, 8, p. 891-901 11 p.

Research output: Contribution to journalReview article

Preclinical Drug Evaluations
Biosensing Techniques
Drug Discovery
Optics and Photonics
Technology

An update on diagnosing and treating primary lung tumors

Rissetto, K. C., Lucas, P. W. & Fan, T. M., Mar 1 2008, In : Veterinary Medicine. 103, 3

Research output: Contribution to journalReview article

lung neoplasms
Lung
Cats
Dogs
cats

Biomarcadores para la enfermedad de Alzheimer y otras demencias degenerativas

Translated title of the contribution: Biomarkers for Alzheimer's disease and other neurodegenerative dementiasMartínez-Rivera, M., Menéndez-González, M., Calatayud, M. T. & Perez Pinera, P., Jan 1 2008, In : Archivos de Medicina. 4, 3, 3.

Research output: Contribution to journalReview article

Dementia
Alzheimer Disease
Biomarkers
Routine Diagnostic Tests
Brain

Blood clotting reactions on nanoscale phospholipid bilayers

Morrissey, J. H., Pureza, V., Davis-Harrison, R. L., Sligar, S. G., Ohkubo, Y. Z. & Tajkhorshid, E., Aug 6 2008, In : Thrombosis Research. 122, SUPPL.1

Research output: Contribution to journalReview article

Blood Coagulation
Phospholipids
Phosphatidylserines
Factor VIIa
Membranes

Cardiopulmonary resuscitation in small animal Medicine: An update

Plunkett, S. J. & McMichael, M., Jan 1 2008, In : Journal of veterinary internal medicine. 22, 1, p. 9-25 17 p.

Research output: Contribution to journalReview article

cardiopulmonary resuscitation
Cardiopulmonary Resuscitation
chest
medicine
Medicine

Contributions of capillary electrophoresis to neuroscience

Lapainis, T. & Sweedler, J. V., Mar 14 2008, In : Journal of Chromatography A. 1184, 1-2, p. 144-158 15 p.

Research output: Contribution to journalReview article

Capillary electrophoresis
Molecules
Neurons
Sampling
Peptides

Detection of nitric oxide in single cells

Ye, X., Rubakhin, S. & Sweedler, J. V., Apr 1 2008, In : Analyst. 133, 4, p. 423-433 11 p.

Research output: Contribution to journalReview article

Nitric oxide
nitric oxide
Nitric Oxide
Nitric Oxide Synthase
Electrochemistry

Emotional Facilitation and Disruption of Memory

Warren, S. L., Miller, G. A. & Heller, W., Dec 1 2008, In : Advances in Psychology. 139, C, p. 45-59 15 p.

Research output: Contribution to journalReview article

Environmental support: An integrative framework

Morrow, D. G. & Rogers, W., Aug 1 2008, In : Human Factors. 50, 4, p. 589-613 25 p.

Research output: Contribution to journalReview article

Human engineering
age difference
Environment Design
performance
Task Performance and Analysis

Exposing plasmids as the Achilles' heel of drug-resistant bacteria

Williams, J. J. & Hergenrother, P., Aug 1 2008, In : Current Opinion in Chemical Biology. 12, 4, p. 389-399 11 p.

Research output: Contribution to journalReview article

Bacteria
Plasmids
Pharmaceutical Preparations
Anti-Bacterial Agents
Antitoxins

Genes and social behavior

Robinson, G. E., Fernald, R. D. & Clayton, D. F., Nov 7 2008, In : Science. 322, 5903, p. 896-900 5 p.

Research output: Contribution to journalReview article

Social Behavior
Brain
Genes
Systems Biology
Regulator Genes