Research Output 1975 2020

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Review article
2011

Position statement part one: Immune function and exercise

Walsh, N. P., Gleeson, M., Shephard, R. J., Gleeson, M., Woods, J. A., Bishop, N. C., Fleshner, M., Green, C., Pedersen, B. K., Hoffman-Goetz, L., Rogers, C. J., Northoff, H., Abbasi, A. & Simon, P., Dec 1 2011, In : Exercise Immunology Review. 17, p. 6-63 58 p.

Research output: Contribution to journalReview article

Mucosal Immunity
Innate Immunity
Respiratory Tract Infections
Immune System
Neutrophils

Protein folding landscapes in the living cell

Ebbinghaus, S. & Gruebele, M., Feb 17 2011, In : Journal of Physical Chemistry Letters. 2, 4, p. 314-319 6 p.

Research output: Contribution to journalReview article

Protein folding
folding
Cells
proteins
Kinetics

Strategies for regeneration of the bone using porcine adult adipose-derived mesenchymal stem cells

Monaco, E., Bionaz, M., Hollister, S. J. & Wheeler, M. B., May 2011, In : Theriogenology. 75, 8, p. 1381-1399 19 p.

Research output: Contribution to journalReview article

Bone Regeneration
Mesenchymal Stromal Cells
stem cells
Swine
Stem Cells
Fosfomycin
Organophosphonates
Biosynthesis
Enzymes
Proteins

Surface functionalization of thin-film diamond for highly stable and selective biological interfaces

Stavis, C., Clare, T. L., Butler, J. E., Radadia, A. D., Carr, R., Zeng, H., King, W. P., Carlisle, J. A., Aksimentiev, A., Bashir, R. & Hamers, R. J., Jan 18 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 3, p. 983-988 6 p.

Research output: Contribution to journalReview article

Diamond
Photoelectron Spectroscopy
Carbon
Ethylene Glycol
Biological Phenomena

Synthetic biology: Putting synthesis into biology

Liang, J., Luo, Y. & Zhao, H., Jan 1 2011, In : Wiley Interdisciplinary Reviews: Systems Biology and Medicine. 3, 1, p. 7-20 14 p.

Research output: Contribution to journalReview article

Synthetic Biology
DNA
Machinery
Genes
Health

The effect of keratoconus on the structural, mechanical, and optical properties of the cornea

Ambekar, R., Toussaint, K. C. & Wagoner Johnson, A., Apr 1 2011, In : Journal of the Mechanical Behavior of Biomedical Materials. 4, 3, p. 223-236 14 p.

Research output: Contribution to journalReview article

Structural properties
Optical properties
Engineers
Mechanical properties
Chemical analysis

The enzyme function initiative

Gerlt, J. A., Allen, K. N., Almo, S. C., Armstrong, R. N., Babbitt, P. C., Cronan, J. E., Dunaway-Mariano, D., Imker, H. J., Jacobson, M. P., Minor, W., Poulter, C. D., Raushel, F. M., Sali, A., Shoichet, B. K. & Sweedler, J. V., Nov 22 2011, In : Biochemistry. 50, 46, p. 9950-9962 13 p.

Research output: Contribution to journalReview article

Enzymes
Microbiology
Genes
Amidohydrolases
Genome

The vaginal microbiome in health and disease

White, B. A., Creedon, D. J., Nelson, K. E. & Wilson, B. A., Oct 1 2011, In : Trends in Endocrinology and Metabolism. 22, 10, p. 389-393 5 p.

Research output: Contribution to journalReview article

Microbiota
Premature Birth
Health
Infection
Ecosystem

Towards an evolutionary model of animal-associated microbiomes

Yeoman, C. J., Chia, N., Yildirim, S., Berg Miller, M. E., Kent, A., Stumpf, R., Leigh, S. R., Nelson, K. E., White, B. A. & Wilson, B. A., Mar 1 2011, In : Entropy. 13, 3, p. 570-594 25 p.

Research output: Contribution to journalReview article

ecosystems
animals
modularity
sequencing
organisms

Transcript profiling and RNA interference as tools to identify small molecule mechanisms and therapeutic potential

Palchaudhuri, R. & Hergenrother, P. J., Jan 21 2011, In : ACS chemical biology. 6, 1, p. 21-32 12 p.

Research output: Contribution to journalReview article

RNA Interference
RNA
Molecules
Pattern matching
Drug Discovery

Triggered release from polymer capsules

Esser-Kahn, A. P., Odom, S. A., Sottos, N. R., White, S. R. & Moore, J. S., Jul 26 2011, In : Macromolecules. 44, 14, p. 5539-5553 15 p.

Research output: Contribution to journalReview article

Self-healing materials
Food preservation
Fragrances
Covalent bonds
Drug delivery

Viscoelastic coagulation testing: Technology, applications, and limitations

McMichael, M. & Smith, S. A., Jun 1 2011, In : Veterinary Clinical Pathology. 40, 2, p. 140-153 14 p.

Research output: Contribution to journalReview article

application technology
coagulation
Veterinary Medicine
Point-of-Care Systems
Technology
2012

A hyphenated optical trap capillary electrophoresis laser induced native fluorescence system for single-cell chemical analysis

Cecala, C., Rubakhin, S. S., Mitchell, J. W., Gillette, M. U. & Sweedler, J. V., Jul 7 2012, In : Analyst. 137, 13, p. 2965-2972 8 p.

Research output: Contribution to journalReview article

Optical Tweezers
Single-Cell Analysis
Capillary electrophoresis
Capillary Electrophoresis
chemical analysis

Applications of colloidal inorganic nanoparticles: From medicine to energy

Lohse, S. E. & Murphy, C. J., Sep 26 2012, In : Journal of the American Chemical Society. 134, 38, p. 15607-15620 14 p.

Research output: Contribution to journalReview article

medicine
Nanoparticles
Medicine
Nanotechnology
nanotechnology

Artificial activation of toxin-antitoxin systems as an antibacterial strategy

Williams, J. J. & Hergenrother, P., Jun 1 2012, In : Trends in Microbiology. 20, 6, p. 291-298 8 p.

Research output: Contribution to journalReview article

Antitoxins
Bacterial Chromosomes
Bacterial Genomes
Genes
Plasmids

Biological timekeeping

Gillette, M. L., Abbott, S. M. & Arnold, J. M., Sep 2012, In : Sleep Medicine Clinics. 7, 3, p. 427-442 16 p.

Research output: Contribution to journalReview article

Biological Clocks
Circadian Clocks
Neurobiology
Periodicity

C-H bond functionalization & synthesis in the 21st century: A brief history and prospectus

White, M. C., Nov 26 2012, In : Synlett. 23, 19, p. 2746-2748 3 p.

Research output: Contribution to journalReview article

Chemical reactivity
Molecules

Chemical treatment of poly(lactic acid) fibers to enhance the rate of thermal depolymerization

Dong, H., Esser-Kahn, A. P., Thakre, P. R., Patrick, J. F., Sottos, N. R., White, S. R. & Moore, J. S., Feb 22 2012, In : ACS Applied Materials and Interfaces. 4, 2, p. 503-509 7 p.

Research output: Contribution to journalReview article

X-Ray Microtomography
Depolymerization
Lactic acid
Hot Temperature
Trifluoroethanol

Computational methods in synthetic biology: Towards computer-aided part design

Wu, K. & Rao, C. V., Aug 1 2012, In : Current Opinion in Chemical Biology. 16, 3-4, p. 318-322 5 p.

Research output: Contribution to journalReview article

Synthetic Biology
Synthetic Genes
Computer-Aided Design
Gene Regulatory Networks
Computational methods

D-Aspartate acts as a signaling molecule in nervous and neuroendocrine systems

Ota, N., Shi, T. & Sweedler, J. V., Nov 1 2012, In : Amino Acids. 43, 5, p. 1873-1886 14 p.

Research output: Contribution to journalReview article

D-Aspartic Acid
Neurosecretory Systems
Nervous System
Molecules
Biosynthesis

Diagnostic Approach to Small Animal Bleeding Disorders

Herring, J. & McMichael, M., May 1 2012, In : Topics in Companion Animal Medicine. 27, 2, p. 73-80 8 p.

Research output: Contribution to journalReview article

Thrombelastography
Specimen Handling
hemostasis
thrombin
Hemostasis

Directed evolution: An evolving and enabling synthetic biology tool

Cobb, R. E., Si, T. & Zhao, H., Aug 1 2012, In : Current Opinion in Chemical Biology. 16, 3-4, p. 285-291 7 p.

Research output: Contribution to journalReview article

Synthetic Biology
Biological systems
Genes
Genome
Research

Discovery, biosynthesis, and engineering of lantipeptides

Knerr, P. J. & van der Donk, W. A., Jul 1 2012, In : Annual review of biochemistry. 81, p. 479-505 27 p.

Research output: Contribution to journalReview article

Bacterial Genomes
Biosynthesis
Gram-Positive Bacteria
Sulfides
Post Translational Protein Processing

Elastic modeling of bone at nanostructural level

Hamed, E. & Jasiuk, I., Mar 22 2012, In : Materials Science and Engineering R: Reports. 73, 3-4, p. 27-49 23 p.

Research output: Contribution to journalReview article

collagens
Collagen
bones
Bone
Durapatite

Estimating the distribution of probable age-at-death from dental remains of immature human fossils

Shackelford, L. L., Harris, A. E. S. & Konigsberg, L. W., Feb 1 2012, In : American journal of physical anthropology. 147, 2, p. 227-253 27 p.

Research output: Contribution to journalReview article

Fossils
Age Distribution
Tooth
death
Tooth Components

Exercise, inflammation and aging

Woods, J. A., Wilund, K. R., Martin, S. A. & Kistler, B. M., 2012, In : Aging and Disease. 3, 1, p. 130-140 11 p.

Research output: Contribution to journalReview article

Exercise
Inflammation
Chronic Disease
Anti-Inflammatory Agents
Randomized Controlled Trials

Expanding the synthetic biology toolbox: Engineering orthogonal regulators of gene expression

Rao, C. V., Oct 1 2012, In : Current Opinion in Biotechnology. 23, 5, p. 689-694 6 p.

Research output: Contribution to journalReview article

Synthetic Biology
Regulator Genes
Gene expression
Bacteria
Genes

Fragile X mental retardation protein: Past, present and future

Kim, M. & Ceman, S., Jul 23 2012, In : Current Protein and Peptide Science. 13, 4, p. 358-371 14 p.

Research output: Contribution to journalReview article

Fragile X Mental Retardation Protein
Trinucleotide Repeats
Fragile X Syndrome
Metabotropic Glutamate Receptors
Cloning

Fulminant hepatic failure secondary to metastatic transitional cell carcinoma - Case report and review of the literature

Sofi, A. A., De Las Casas, L., Tariq, Z., Nawras, A. & Youssef, W., Sep 1 2012, In : Journal of Gastrointestinal Cancer. 43, SUPPL. 1, p. S111-S113

Research output: Contribution to journalReview article

Acute Liver Failure
Transitional Cell Carcinoma
Liver Neoplasms
Urinary Bladder Neoplasms

Gold nanorods: Their potential for photothermal therapeutics and drug delivery, tempered by the complexity of their biological interactions

Alkilany, A. M., Thompson, L. B., Boulos, S. P., Sisco, P. N. & Murphy, C. J., Feb 1 2012, In : Advanced Drug Delivery Reviews. 64, 2, p. 190-199 10 p.

Research output: Contribution to journalReview article

Nanotubes
Gold
Pharmaceutical Preparations
Therapeutics
Particle Size

Hydrogels for in vivo-like three-dimensional cellular studies

Devolder, R. & Kong, H. J., Jul 1 2012, In : Wiley Interdisciplinary Reviews: Systems Biology and Medicine. 4, 4, p. 351-365 15 p.

Research output: Contribution to journalReview article

Hydrogels
Hydrogel
Polymers
Cell culture
Polyethylene glycols

Inherited Disorders of Hemostasis in Dogs and Cats

Barr, J. W. & McMichael, M., May 1 2012, In : Topics in Companion Animal Medicine. 27, 2, p. 53-58 6 p.

Research output: Contribution to journalReview article

hemostasis
genetic disorders
coagulation
Hemostasis
Hemostatic Disorders

Mass spectrometry imaging and profiling of single cells

Lanni, E. J., Rubakhin, S. & Sweedler, J. V., Aug 30 2012, In : Journal of Proteomics. 75, 16, p. 5036-5051 16 p.

Research output: Contribution to journalReview article

Mass spectrometry
Secondary Ion Mass Spectrometry
Mass Spectrometry
Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry
Imaging techniques

Message framing and medium considerations for recruiting newly eligible teen organ donor registrants

Quick, B. L., Bosch, D. & Morgan, S. E., Jun 1 2012, In : American Journal of Transplantation. 12, 6, p. 1593-1597 5 p.

Research output: Contribution to journalReview article

Pamphlets
Tissue Donors
Tissue and Organ Procurement
Postal Service
Marketing

Multi-scale modelling of elastic moduli of trabecular bone

Hamed, E., Jasiuk, I., Yoo, A., Lee, Y. & Liszka, T., Jul 7 2012, In : Journal of the Royal Society Interface. 9, 72, p. 1654-1673 20 p.

Research output: Contribution to journalReview article

Elastic Modulus
Bone
Elastic moduli
Nanocomposites
Micromechanics

New Models of Hemostasis

McMichael, M., May 1 2012, In : Topics in Companion Animal Medicine. 27, 2, p. 40-45 6 p.

Research output: Contribution to journalReview article

hemostasis
coagulation
Hemostasis
Blood Coagulation
Anticoagulants

New perspectives on neuronal development via microfluidic environments

Millet, L. J. & Gillette, M. U., Dec 1 2012, In : Trends in Neurosciences. 35, 12, p. 752-761 10 p.

Research output: Contribution to journalReview article

Lab-On-A-Chip Devices
Microtechnology
Microfluidics
Neurosciences
Dendrites

Optical coherence tomography for rapid tissue screening and directed histological sectioning

Jung, W. & Boppart, S. A., Apr 26 2012, In : Analytical Cellular Pathology. 35, 3, p. 129-143 15 p.

Research output: Contribution to journalReview article

Optical Coherence Tomography
Histology
Observation
Pathology
Selection Bias

Percutaneous balloon rhizotomy for trigeminal neuralgia using three-dimensional fluoroscopy

Olivero, W. C., Wang, H., Rak, R. & Sharrock, M. F., Jan 2012, In : World Neurosurgery. 77, 1, p. 202.e1-202.e3

Research output: Contribution to journalReview article

Foramen Ovale
Rhizotomy
Trigeminal Neuralgia
Fluoroscopy
Spondylosis

Phase II study of the multitargeted tyrosine kinase inhibitor XL647 in patients with non-small-cell lung cancer

Pietanza, M. C., Gadgeel, S. M., Dowlati, A., Lynch, T. J., Salgia, R., Rowland, K. M., Wertheim, M. S., Price, K. A., Riely, G. J., Azzoli, C. G., Miller, V. A., Krug, L. M., Kris, M. G., Beumer, J. H., Tonda, M., Mitchell, B. & Rizvi, N. A., Jan 1 2012, In : Journal of Thoracic Oncology. 7, 5, p. 856-865 10 p.

Research output: Contribution to journalReview article

Vascular Endothelial Growth Factor Receptor
Non-Small Cell Lung Carcinoma
Protein-Tyrosine Kinases
Appointments and Schedules
Mutation

Photonic crystal enhanced fluorescence for early breast cancer biomarker detection

Cunningham, B. T. & Zangar, R. C., Aug 1 2012, In : Journal of Biophotonics. 5, 8-9, p. 617-628 12 p.

Research output: Contribution to journalReview article

Optics and Photonics
biomarkers
Tumor Biomarkers
Photonic crystals
breast

Polymeric nanomedicines based on poly(lactide) and poly(lactide-co- glycolide)

Tong, R., Gabrielson, N. P., Fan, T. M. & Cheng, J., Dec 2012, In : Current Opinion in Solid State and Materials Science. 16, 6, p. 323-332 10 p.

Research output: Contribution to journalReview article

Nanoconjugates
Medical nanotechnology
Polyglactin 910
Drug delivery
Polyesters

Polyphosphate: An ancient molecule that links platelets, coagulation, and inflammation

Morrissey, J. H., Choi, S. H. & Smith, S. A., Jun 21 2012, In : Blood. 119, 25, p. 5972-5979 8 p.

Research output: Contribution to journalReview article

Polyphosphates
Platelets
Coagulation
Blood Platelets
Inflammation

Prostate angiosarcoma: Is there any association with previous radiation therapy?

Khaliq, W., Meyer, C. F., Uzoaru, I., Wolf, R. M. & Antonarakis, E. S., Dec 1 2012, In : BJU International. 110, 11 C, p. E819-E825

Research output: Contribution to journalReview article

Hemangiosarcoma
Prostate
Radiotherapy
Observational Studies
PubMed

Prostate angiosarcoma: A case report and literature review

Khaliq, W., Meyer, C. F., Uzoaru, I., Wolf, R. M. & Antonarakis, E. S., Dec 1 2012, In : Medical Oncology. 29, 4, p. 2901-2903 3 p.

Research output: Contribution to journalReview article

Hemangiosarcoma
Prostate
Sarcoma
Dysuria
Pelvic Pain

Recent advances in targeted genome engineering in mammalian systems

Sun, N., Abil, Z. & Zhao, H., Sep 1 2012, In : Biotechnology Journal. 7, 9, p. 1074-1087 14 p.

Research output: Contribution to journalReview article

Genome
Homologous Recombination
Gene Targeting
Double-Stranded DNA Breaks
Endonucleases

Sampling techniques for single-cell electrophoresis

Cecala, C. & Sweedler, J. V., Jul 7 2012, In : Analyst. 137, 13, p. 2922-2929 8 p.

Research output: Contribution to journalReview article

Electrophoresis
electrokinesis
Sampling
detection method
Microfluidics

The golden age: Gold nanoparticles for biomedicine

Dreaden, E. C., Alkilany, A. M., Huang, X., Murphy, C. J. & El-Sayed, M. A., Apr 7 2012, In : Chemical Society Reviews. 41, 7, p. 2740-2779 40 p.

Research output: Contribution to journalReview article

Gold
Nanoparticles
Biological systems
Nanotechnology
Health