Research Output 1972 2020

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Review article
2013

Optical coherence tomography for rapid tissue screening and directed histological sectioning.

Jung, W. & Boppart, S. A., 2013, In : Studies in Health Technology and Informatics. 185, p. 109-128 20 p.

Research output: Contribution to journalReview article

Optical tomography
Optical Coherence Tomography
Screening
Tissue
Imaging techniques

Phosphonate biosynthesis and catabolism: A treasure trove of unusual enzymology

Peck, S. C. & van der Donk, W. A., Aug 1 2013, In : Current Opinion in Chemical Biology. 17, 4, p. 580-588 9 p.

Research output: Contribution to journalReview article

Organophosphonates
Biosynthesis
Biochemistry
Phosphates
Biological Products

Polymer mechanochemistry: Techniques to generate molecular force via elongational flows

May, P. A. & Moore, J. S., Sep 21 2013, In : Chemical Society Reviews. 42, 18, p. 7497-7506 10 p.

Research output: Contribution to journalReview article

Polymers
Flow fields
Chemical elements

Progress toward single cell metabolomics

Rubakhin, S., Lanni, E. J. & Sweedler, J. V., Feb 1 2013, In : Current Opinion in Biotechnology. 24, 1, p. 95-104 10 p.

Research output: Contribution to journalReview article

Metabolomics
Metabolites
Molecules
Microfluidics
Mass spectrometry

Quantitation of endogenous peptides using mass spectrometry based methods

Romanova, E. V., Dowd, S. E. & Sweedler, J. V., Oct 1 2013, In : Current Opinion in Chemical Biology. 17, 5, p. 801-808 8 p.

Research output: Contribution to journalReview article

Mass spectrometry
Mass Spectrometry
Peptides
Data Mining
Molecular interactions

Relationships among cognition, emotion, and motivation: Implications for intervention and neuroplasticity in psychopathology

Crocker, L. D., Heller, W., Warren, S. L., O'Hare, A. J., Infantolino, Z. P. & Miller, G. A., May 23 2013, In : Frontiers in Human Neuroscience. MAY

Research output: Contribution to journalReview article

Neuronal Plasticity
Psychopathology
Cognition
Emotions
Brain

Ribosomally synthesized and post-translationally modified peptide natural products: Overview and recommendations for a universal nomenclature

Arnison, P. G., Bibb, M. J., Bierbaum, G., Bowers, A. A., Bugni, T. S., Bulaj, G., Camarero, J. A., Campopiano, D. J., Challis, G. L., Clardy, J., Cotter, P. D., Craik, D. J., Dawson, M., Dittmann, E., Donadio, S., Dorrestein, P. C., Entian, K. D., Fischbach, M. A., Garavelli, J. S., Göransson, U. & 45 others, Gruber, C. W., Haft, D. H., Hemscheidt, T. K., Hertweck, C., Hill, C., Horswill, A. R., Jaspars, M., Kelly, W. L., Klinman, J. P., Kuipers, O. P., Link, A. J., Liu, W., Marahiel, M. A., Mitchell, D. A., Moll, G. N., Moore, B. S., Müller, R., Nair, S. K., Nes, I. F., Norris, G. E., Olivera, B. M., Onaka, H., Patchett, M. L., Piel, J., Reaney, M. J. T., Rebuffat, S., Ross, R. P., Sahl, H. G., Schmidt, E. W., Selsted, M. E., Severinov, K., Shen, B., Sivonen, K., Smith, L., Stein, T., Süssmuth, R. D., Tagg, J. R., Tang, G. L., Truman, A. W., Vederas, J. C., Walsh, C. T., Walton, J. D., Wenzel, S. C., Willey, J. M. & Van Der Donk, W. A., Jan 2013, In : Natural Product Reports. 30, 1, p. 108-160 53 p.

Research output: Contribution to journalReview article

Biosynthesis
Terminology
Biological Products
Peptides
compound 20

Role of T cell receptor affinity in the efficacy and specificity of adoptive T cell therapies

Stone, J. D. & Kranz, D. M., Sep 16 2013, In : Frontiers in immunology. 4, AUG, Article 244.

Research output: Contribution to journalReview article

Cell- and Tissue-Based Therapy
T-Cell Antigen Receptor
T-Lymphocytes
Antigens
Single-Chain Antibodies

Technologies for powered ankle-foot orthotic systems: Possibilities and challenges

Shorter, K. A., Xia, J., Hsiao-Wecksler, E. T., Durfee, W. K. & Kogler, G. F., Jan 1 2013, In : IEEE/ASME Transactions on Mechatronics. 18, 1, p. 337-347 11 p., 6104405.

Research output: Contribution to journalReview article

Orthotics
Damping

The AOSpine North America geriatric odontoid fracture mortality study: A retrospective review of mortality outcomes for operative versus nonoperative treatment of 322 patients with long-term follow-up

Chapman, J., Smith, J. S., Kopjar, B., Vaccaro, A. R., Arnold, P., Shaffrey, C. I. & Fehlings, M. G., Jun 1 2013, In : Spine. 38, 13, p. 1098-1104 7 p.

Research output: Contribution to journalReview article

North America
Geriatrics
Retrospective Studies
Confidence Intervals
Mortality

The i5K initiative: Advancing arthropod genomics for knowledge, human health, agriculture, and the environment

Evans, J. D., Brown, S. J., Hackett, K. J. J., Robinson, G., Richards, S., Lawson, D., Elsik, C., Coddington, J., Edwards, O., Emrich, S., Gabaldon, T., Goldsmith, M., Hanes, G., Misof, B., Muñoz-Torres, M., Niehuis, O., Papanicolaou, A., Pfrender, M., Poelchau, M., Purcell-Miramontes, M. & 7 others, Robertson, H. M., Ryder, O., Tagu, D., Torres, T., Zdobnov, E., Zhang, G. & Zhou, X., Sep 1 2013, In : Journal of Heredity. 104, 5, p. 595-600 6 p.

Research output: Contribution to journalReview article

Arthropods
Genomics
Agriculture
Health
Tetranychidae

The primate vaginal microbiome: comparative context and implications for human health and disease.

Stumpf, R., Wilson, B. A., Rivera, A., Yildirim, S., Yeoman, C. J., Polk, J. D., White, B. A. & Leigh, S. R., Dec 2013, In : American journal of physical anthropology. 152 Suppl 57, p. 119-134 16 p.

Research output: Contribution to journalReview article

Microbiota
Primates
Disease
Health
health

The quest for shape control: A history of gold nanorod synthesis

Lohse, S. E. & Murphy, C. J., Apr 23 2013, In : Chemistry of Materials. 25, 8, p. 1250-1261 12 p.

Research output: Contribution to journalReview article

Nanorods
Gold
Nanoparticles
Nanostructured materials
Aspect ratio

Visualizing the proteome: Mapping protein changes in disease states with mass spectrometry imaging

Lanni, E. J., Rubakhin, S. & Sweedler, J. V., Mar 1 2013, In : Journal of Neurochemistry. 124, 5, p. 581-583 3 p.

Research output: Contribution to journalReview article

Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry
Amyotrophic Lateral Sclerosis
Proteome
Neuroimaging
Mass Spectrometry
2012

Advances in targeted genome editing

Perez-Pinera, P., Ousterout, D. G. & Gersbach, C. A., Aug 1 2012, In : Current Opinion in Chemical Biology. 16, 3-4, p. 268-277 10 p.

Research output: Contribution to journalReview article

Genes
Genetically Modified Organisms
Zinc Fingers
Biotechnology
Agriculture

A hyphenated optical trap capillary electrophoresis laser induced native fluorescence system for single-cell chemical analysis

Cecala, C., Rubakhin, S., Mitchell, J. W., Gillette, M. L. & Sweedler, J. V., Jul 7 2012, In : Analyst. 137, 13, p. 2965-2972 8 p.

Research output: Contribution to journalReview article

Optical Tweezers
Single-Cell Analysis
Capillary electrophoresis
Capillary Electrophoresis
chemical analysis

Applications of colloidal inorganic nanoparticles: From medicine to energy

Lohse, S. E. & Murphy, C. J., Sep 26 2012, In : Journal of the American Chemical Society. 134, 38, p. 15607-15620 14 p.

Research output: Contribution to journalReview article

medicine
Nanoparticles
Medicine
Nanotechnology
nanotechnology

Artificial activation of toxin-antitoxin systems as an antibacterial strategy

Williams, J. J. & Hergenrother, P., Jun 1 2012, In : Trends in Microbiology. 20, 6, p. 291-298 8 p.

Research output: Contribution to journalReview article

Antitoxins
Bacterial Chromosomes
Bacterial Genomes
Genes
Plasmids

Biological timekeeping

Gillette, M. L., Abbott, S. M. & Arnold, J. M., Sep 2012, In : Sleep Medicine Clinics. 7, 3, p. 427-442 16 p.

Research output: Contribution to journalReview article

Biological Clocks
Circadian Clocks
Neurobiology
Periodicity

C-H bond functionalization & synthesis in the 21st century: A brief history and prospectus

White, M. C., Nov 26 2012, In : Synlett. 23, 19, p. 2746-2748 3 p.

Research output: Contribution to journalReview article

Chemical reactivity
Molecules

Chemical treatment of poly(lactic acid) fibers to enhance the rate of thermal depolymerization

Dong, H., Esser-Kahn, A. P., Thakre, P. R., Patrick, J. F., Sottos, N. R., White, S. R. & Moore, J. S., Feb 22 2012, In : ACS Applied Materials and Interfaces. 4, 2, p. 503-509 7 p.

Research output: Contribution to journalReview article

X-Ray Microtomography
Depolymerization
Lactic acid
Hot Temperature
Trifluoroethanol

Clinical implication of Meissner's corpuscles

Vega, J. A., López-Muñiz, A., Calavia, M. G., García-Suárez, O., Cobo, J., Otero, J., Arias-Carrión, O., Perez Pinera, P. & Menéndez-González, M., Dec 1 2012, In : CNS and Neurological Disorders - Drug Targets. 11, 7, p. 856-868 13 p.

Research output: Contribution to journalReview article

Mechanoreceptors
Skin
Biopsy
Pathology
Age Distribution

Computational methods in synthetic biology: Towards computer-aided part design

Wu, K. & Rao, C. V., Aug 1 2012, In : Current Opinion in Chemical Biology. 16, 3-4, p. 318-322 5 p.

Research output: Contribution to journalReview article

Synthetic Biology
Synthetic Genes
Computer-Aided Design
Gene Regulatory Networks
Computational methods

D-Aspartate acts as a signaling molecule in nervous and neuroendocrine systems

Ota, N., Shi, T. & Sweedler, J. V., Nov 1 2012, In : Amino Acids. 43, 5, p. 1873-1886 14 p.

Research output: Contribution to journalReview article

D-Aspartic Acid
Neurosecretory Systems
Nervous System
Molecules
Biosynthesis

Diagnostic Approach to Small Animal Bleeding Disorders

Herring, J. & McMichael, M., May 1 2012, In : Topics in Companion Animal Medicine. 27, 2, p. 73-80 8 p.

Research output: Contribution to journalReview article

Thrombelastography
Specimen Handling
hemostasis
thrombin
Hemostasis

Directed evolution: An evolving and enabling synthetic biology tool

Cobb, R. E., Si, T. & Zhao, H., Aug 1 2012, In : Current Opinion in Chemical Biology. 16, 3-4, p. 285-291 7 p.

Research output: Contribution to journalReview article

Synthetic Biology
Biological systems
Genes
Genome
Research

Discovery, biosynthesis, and engineering of lantipeptides

Knerr, P. J. & van der Donk, W. A., Jul 1 2012, In : Annual review of biochemistry. 81, p. 479-505 27 p.

Research output: Contribution to journalReview article

Bacterial Genomes
Biosynthesis
Gram-Positive Bacteria
Sulfides
Post Translational Protein Processing

Elastic modeling of bone at nanostructural level

Hamed, E. & Jasiuk, I., Mar 22 2012, In : Materials Science and Engineering R: Reports. 73, 3-4, p. 27-49 23 p.

Research output: Contribution to journalReview article

collagens
Collagen
bones
Bone
Durapatite

Estimating the distribution of probable age-at-death from dental remains of immature human fossils

Shackelford, L. L., Harris, A. E. S. & Konigsberg, L. W., Feb 1 2012, In : American journal of physical anthropology. 147, 2, p. 227-253 27 p.

Research output: Contribution to journalReview article

Fossils
Age Distribution
Tooth
death
Tooth Components

Exercise, inflammation and aging

Woods, J. A., Wilund, K. R., Martin, S. A. & Kistler, B. M., 2012, In : Aging and Disease. 3, 1, p. 130-140 11 p.

Research output: Contribution to journalReview article

Exercise
Inflammation
Chronic Disease
Anti-Inflammatory Agents
Randomized Controlled Trials

Expanding the synthetic biology toolbox: Engineering orthogonal regulators of gene expression

Rao, C. V., Oct 1 2012, In : Current Opinion in Biotechnology. 23, 5, p. 689-694 6 p.

Research output: Contribution to journalReview article

Synthetic Biology
Regulator Genes
Gene expression
Bacteria
Genes

Fragile X mental retardation protein: Past, present and future

Kim, M. & Ceman, S., Jul 23 2012, In : Current Protein and Peptide Science. 13, 4, p. 358-371 14 p.

Research output: Contribution to journalReview article

Fragile X Mental Retardation Protein
Trinucleotide Repeats
Fragile X Syndrome
Metabotropic Glutamate Receptors
Cloning

Gold nanorods: Their potential for photothermal therapeutics and drug delivery, tempered by the complexity of their biological interactions

Alkilany, A. M., Thompson, L. B., Boulos, S. P., Sisco, P. N. & Murphy, C. J., Feb 1 2012, In : Advanced Drug Delivery Reviews. 64, 2, p. 190-199 10 p.

Research output: Contribution to journalReview article

Nanotubes
Gold
Pharmaceutical Preparations
Therapeutics
Particle Size

Hydrogels for in vivo-like three-dimensional cellular studies

Devolder, R. & Kong, H. J., Jul 1 2012, In : Wiley Interdisciplinary Reviews: Systems Biology and Medicine. 4, 4, p. 351-365 15 p.

Research output: Contribution to journalReview article

Hydrogels
Hydrogel
Polymers
Cell culture
Polyethylene glycols

Inherited Disorders of Hemostasis in Dogs and Cats

Barr, J. W. & McMichael, M., May 1 2012, In : Topics in Companion Animal Medicine. 27, 2, p. 53-58 6 p.

Research output: Contribution to journalReview article

hemostasis
genetic disorders
coagulation
Hemostasis
Hemostatic Disorders

Mass spectrometry imaging and profiling of single cells

Lanni, E. J., Rubakhin, S. & Sweedler, J. V., Aug 30 2012, In : Journal of Proteomics. 75, 16, p. 5036-5051 16 p.

Research output: Contribution to journalReview article

Mass spectrometry
Secondary Ion Mass Spectrometry
Mass Spectrometry
Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry
Imaging techniques

Message framing and medium considerations for recruiting newly eligible teen organ donor registrants

Quick, B. L., Bosch, D. & Morgan, S. E., Jun 1 2012, In : American Journal of Transplantation. 12, 6, p. 1593-1597 5 p.

Research output: Contribution to journalReview article

Pamphlets
Tissue Donors
Tissue and Organ Procurement
Postal Service
Marketing

Multi-scale modelling of elastic moduli of trabecular bone

Hamed, E., Jasiuk, I., Yoo, A., Lee, Y. & Liszka, T., Jul 7 2012, In : Journal of the Royal Society Interface. 9, 72, p. 1654-1673 20 p.

Research output: Contribution to journalReview article

Elastic Modulus
Bone
Elastic moduli
Nanocomposites
Micromechanics

New Models of Hemostasis

McMichael, M., May 1 2012, In : Topics in Companion Animal Medicine. 27, 2, p. 40-45 6 p.

Research output: Contribution to journalReview article

hemostasis
coagulation
Hemostasis
Blood Coagulation
Anticoagulants

New perspectives on neuronal development via microfluidic environments

Millet, L. J. & Gillette, M. L., Dec 1 2012, In : Trends in Neurosciences. 35, 12, p. 752-761 10 p.

Research output: Contribution to journalReview article

Lab-On-A-Chip Devices
Microtechnology
Microfluidics
Neurosciences
Dendrites

Optical coherence tomography for rapid tissue screening and directed histological sectioning

Jung, W. & Boppart, S. A., Apr 26 2012, In : Analytical Cellular Pathology. 35, 3, p. 129-143 15 p.

Research output: Contribution to journalReview article

Optical Coherence Tomography
Histology
Observation
Pathology
Selection Bias

Percutaneous balloon rhizotomy for trigeminal neuralgia using three-dimensional fluoroscopy

Olivero, W. C., Wang, H., Rak, R. & Sharrock, M. F., Jan 2012, In : World Neurosurgery. 77, 1, p. 202.e1-202.e3

Research output: Contribution to journalReview article

Foramen Ovale
Rhizotomy
Trigeminal Neuralgia
Fluoroscopy
Spondylosis

Photonic crystal enhanced fluorescence for early breast cancer biomarker detection

Cunningham, B. T. & Zangar, R. C., Aug 1 2012, In : Journal of Biophotonics. 5, 8-9, p. 617-628 12 p.

Research output: Contribution to journalReview article

Optics and Photonics
biomarkers
Tumor Biomarkers
Photonic crystals
breast

Polymeric nanomedicines based on poly(lactide) and poly(lactide-co- glycolide)

Tong, R., Gabrielson, N. P., Fan, T. M. & Cheng, J., Dec 2012, In : Current Opinion in Solid State and Materials Science. 16, 6, p. 323-332 10 p.

Research output: Contribution to journalReview article

Nanoconjugates
Medical nanotechnology
Polyglactin 910
Drug delivery
Polyesters

Polyphosphate: An ancient molecule that links platelets, coagulation, and inflammation

Morrissey, J. H., Choi, S. H. & Smith, S. A., Jun 21 2012, In : Blood. 119, 25, p. 5972-5979 8 p.

Research output: Contribution to journalReview article

Polyphosphates
Platelets
Coagulation
Blood Platelets
Inflammation

Prostate angiosarcoma: A case report and literature review

Khaliq, W., Meyer, C. F., Uzoaru, I., Wolf, R. M. & Antonarakis, E. S., Dec 1 2012, In : Medical Oncology. 29, 4, p. 2901-2903 3 p.

Research output: Contribution to journalReview article

Hemangiosarcoma
Prostate
Sarcoma
Dysuria
Pelvic Pain

Prostate angiosarcoma: Is there any association with previous radiation therapy?

Khaliq, W., Meyer, C. F., Uzoaru, I., Wolf, R. M. & Antonarakis, E. S., Dec 1 2012, In : BJU International. 110, 11 C

Research output: Contribution to journalReview article

Hemangiosarcoma
Prostate
Radiotherapy
Observational Studies
PubMed

Recent advances in targeted genome engineering in mammalian systems

Sun, N., Abil, Z. & Zhao, H., Sep 1 2012, In : Biotechnology Journal. 7, 9, p. 1074-1087 14 p.

Research output: Contribution to journalReview article

Genome
Homologous Recombination
Gene Targeting
Double-Stranded DNA Breaks
Endonucleases
Helicobacter pylori
Stomach
Epithelium
Homeostasis
Mitochondrial Dynamics