Research Output 1975 2020

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Review article
2009

Protein engineering in designing tailored enzymes and microorganisms for biofuels production

Wen, F., Nair, N. U. & Zhao, H., Aug 1 2009, In : Current Opinion in Biotechnology. 20, 4, p. 412-419 8 p.

Research output: Contribution to journalReview article

Protein Engineering
Biofuels
Microorganisms
Enzymes
Proteins

Protein-membrane interactions: Blood clotting on nanoscale bilayers

Morrissey, J. H., Pureza, V., Davis-Harrison, R. L., Sligar, S. G., Rienstra, C. M., Kijac, A. Z., Ohkubo, Y. Z. & Tajkhorshid, E., Aug 4 2009, In : Journal of Thrombosis and Haemostasis. 7, SUPPL. 1, p. 169-172 4 p.

Research output: Contribution to journalReview article

Blood Coagulation
Phospholipids
Membrane Proteins
Peptide Hydrolases
Membrane Microdomains

Relational memory and the hippocampus: Representations and methods

Konkel, A. & Cohen, N. J., Dec 1 2009, In : Frontiers in Neuroscience. 3, SEP, Article 2.

Research output: Contribution to journalReview article

Hippocampus
Research

Soy isoflavones and virus infections

Andres, A., Donovan, S. M. & Kuhlenschmidt, M. S., Aug 1 2009, In : Journal of Nutritional Biochemistry. 20, 8, p. 563-569 7 p.

Research output: Contribution to journalReview article

Isoflavones
Virus Diseases
Viruses
Flavonoids
Genistein

Synthetic gene networks: the next wave in biotechnology?

Bhalerao, K. D., Jun 1 2009, In : Trends in Biotechnology. 27, 6, p. 368-374 7 p.

Research output: Contribution to journalReview article

Synthetic Genes
Gene Regulatory Networks
Biotechnology
Genes
Synthetic Biology

T-cell receptor binding affinities and kinetics: impact on T-cell activity and specificity

Stone, J. D., Chervin, A. S. & Kranz, D. M., Feb 1 2009, In : Immunology. 126, 2, p. 165-176 12 p.

Research output: Contribution to journalReview article

T-Cell Antigen Receptor Specificity
T-Cell Antigen Receptor
Major Histocompatibility Complex
Peptides
T-Lymphocytes

Translation regulation of mRNAs by the fragile X family of proteins through the microRNA pathway

Cheever, A. & Ceman, S., Jan 1 2009, In : RNA Biology. 6, 2, p. 175-178 4 p.

Research output: Contribution to journalReview article

Protein Biosynthesis
MicroRNAs
Proteins
Fragile X Mental Retardation Protein
Phosphorylation
2010

Advances in pediatric restless legs syndrome: Iron, genetics, diagnosis and treatment

Picchietti, M. A. & Picchietti, D. L., Aug 1 2010, In : Sleep Medicine. 11, 7, p. 643-651 9 p.

Research output: Contribution to journalReview article

Restless Legs Syndrome
Iron
Pediatrics
Nocturnal Myoclonus Syndrome
Therapeutics

Animal models of osteosarcoma

Fan, T. M., Aug 1 2010, In : Expert Review of Anticancer Therapy. 10, 8, p. 1327-1338 12 p.

Research output: Contribution to journalReview article

Osteosarcoma
Animal Models
Neoplasms
Osteoblasts
Sarcoma

Antibiotic prescription pattern for viral respiratory illness in emergency room and ambulatory care settings

Ahmed, M. N., Muyot, M. M., Begum, S., Smith, P., Little, C. & Windemuller, F. J., Jun 1 2010, In : Clinical Pediatrics. 49, 6, p. 542-547 6 p.

Research output: Contribution to journalReview article

Emergency Medical Services
Ambulatory Care
Prescriptions
Hospital Emergency Service
Confidence Intervals

Approaches to multimodality imaging of angiogenesis

Dobrucki, L. W., De Muinck, E. D., Lindner, J. R. & Sinusas, A. J., Dec 1 2010, In : Journal of Nuclear Medicine. 51, SUPPL.1, p. 66S-79S

Research output: Contribution to journalReview article

Microvessels
Perfusion

A review of new analytic techniques for quantifying symmetry in locomotion

Hsiao-Wecksler, E. T., Polk, J. D., Rosengren, K. S., Sosnoff, J. J. & Hong, S., Jun 1 2010, In : Symmetry. 2, 2, p. 1135-1155 21 p.

Research output: Contribution to journalReview article

Wheelchairs
locomotion
Locomotion
Propulsion
Data acquisition

Bedside and radiologic procedures in the critically ill obese patient

Olson, M. M. & Pohl, C., Oct 2010, In : Critical Care Clinics. 26, 4, p. 665-668 4 p.

Research output: Contribution to journalReview article

Critical Illness
Human Engineering
Radiology
Equipment and Supplies

Capturing functional motions of membrane channels and transporters with molecular dynamics simulation

Shaikh, S. A., Wen, P. C., Enkavi, G., Huang, Z. & Tajkhorshid, E., Dec 1 2010, In : Journal of Computational and Theoretical Nanoscience. 7, 12, p. 2481-2500 20 p.

Research output: Contribution to journalReview article

transporter
Membrane Transport Proteins
Ion Channels
Molecular Dynamics Simulation
Molecular dynamics

Dynamic optical coherence elastography: A review

Liang, X., Crecea, V. & Boppart, S. A., Oct 1 2010, In : Journal of Innovative Optical Health Sciences. 3, 4, p. 221-233 13 p.

Research output: Contribution to journalReview article

Elasticity Imaging Techniques
Tissue
Imaging techniques
biodynamics
Biomechanics

Endometrial decidualization: Of mice and men

Ramathal, C. Y., Bagchi, I. C., Taylor, R. N. & Bagchi, M. K., Feb 15 2010, In : Seminars in Reproductive Medicine. 28, 1, p. 17-26 10 p.

Research output: Contribution to journalReview article

Steroids
Endometrium
Embryonic Structures
Uterine Diseases
Progesterone Receptors

End-stage renal disease in the elderly: dialysis or conservative management?

Abdel-Rahman, E. & Holley, J. L., Jan 1 2010, In : Hospital practice (1995). 38, 3, p. 122-127 6 p.

Research output: Contribution to journalReview article

Chronic Kidney Failure
Dialysis
Chronic Renal Insufficiency
Quality of Life
Palliative Care

Exploring transmembrane diffusion pathways with molecular dynamics

Wang, Y., Shaikh, S. A. & Tajkhorshid, E., Jun 2010, In : Physiology. 25, 3, p. 142-154 13 p.

Research output: Contribution to journalReview article

Molecular Dynamics Simulation
Gases
Lipids
Membranes
Water

Fishing for the hidden peptidome in health and disease (Drug Abuse)

Fricker, L. D. & Sweedler, J. V., Dec 1 2010, In : AAPS Journal. 12, 4, p. 679-682 4 p.

Research output: Contribution to journalReview article

Substance-Related Disorders
Health
Proteins
Peptides
Peptide Receptors

Follow the leader: The use of leader peptides to guide natural product biosynthesis

Oman, T. J. & Van Der Donk, W. A., Jan 2010, In : Nature chemical biology. 6, 1, p. 9-18 10 p.

Research output: Contribution to journalReview article

Protein Sorting Signals
Biological Products
Avalanches
Peptides
Post Translational Protein Processing

Fourier transform light scattering (FTLS) of cells and tissues

Ding, H., Wang, Z., Nguyen, F. T., Boppart, S. A., Millet, L. J., Gillette, M. U., Liu, J., Boppart, M. D. & Popescu, G., Dec 1 2010, In : Journal of Computational and Theoretical Nanoscience. 7, 12, p. 2501-2511 11 p.

Research output: Contribution to journalReview article

Light Scattering
Light scattering
Fourier transform
Fourier transforms
light scattering

Fourier transform light scattering of biological structure and dynamics

Ding, H., Berl, E., Wang, Z., Millet, L. J., Gillette, M. U., Liu, J., Boppart, M. & Popescu, G., Jul 1 2010, In : IEEE Journal on Selected Topics in Quantum Electronics. 16, 4, p. 909-918 10 p., 5443519.

Research output: Contribution to journalReview article

Light scattering
Fourier transforms
light scattering
Tissue
Dynamic light scattering

Gautreaux mothers and their children: An update

Deluca, S., Duncan, G. J., Keels, M. & Mendenhall, R. M., Dec 1 2010, In : Housing Policy Debate. 20, 1, p. 7-25 19 p.

Research output: Contribution to journalReview article

residential mobility
affluence
public housing
suburb
economics

In situ uniaxial mechanical testing of small scale materials - A review

Kang, W., Rajagopalan, J. & Saif, M. T. A., Dec 2010, In : Nanoscience and Nanotechnology Letters. 2, 4, p. 282-287 6 p.

Research output: Contribution to journalReview article

Mechanical testing
Mechanical properties
Testing

Microscopic imaging and spectroscopy with scattered light

Boustany, N. N., Boppart, S. A. & Backman, V., Aug 15 2010, In : Annual Review of Biomedical Engineering. 12, p. 285-314 30 p.

Research output: Contribution to journalReview article

Spectrum Analysis
Spectroscopy
Tissue
Imaging techniques
Light

Nanofluidics in chemical analysis

Piruska, A., Gong, M., Sweedler, J. V. & Bohn, P. W., Mar 1 2010, In : Chemical Society Reviews. 39, 3, p. 1060-1072 13 p.

Research output: Contribution to journalReview article

Nanofluidics
Nanopores
Chemical analysis
Microfluidics
Microsensors

Nanopore sensors for nucleic acid analysis

Venkatesan, B. M. & Bashir, R., Oct 2010, In : Nature Nanotechnology. 6, 10, p. 615-624 10 p.

Research output: Contribution to journalReview article

Nanopores
Nucleic acids
nucleic acids
Nucleic Acids
DNA

Recent insights into Pasteurella multocida toxin and other G-protein-modulating bacterial toxins

Wilson, B. A. & Ho, M., Aug 1 2010, In : Future Microbiology. 5, 8, p. 1185-1201 17 p.

Research output: Contribution to journalReview article

Bacterial Toxins
GTP-Binding Proteins
Pasteurella multocida
Escherichia coli
Yersinia

Substrate activation by iron superoxo intermediates

van der Donk, W. A., Krebs, C. & Bollinger, J. M., Dec 1 2010, In : Current Opinion in Structural Biology. 20, 6, p. 673-683 11 p.

Research output: Contribution to journalReview article

Iron
Oxygenases
Superoxides
Hydrogen
Oxidoreductases

The balance between pre- and post-transfer editing in tRNA synthetases

Martinis, S. A. & Boniecki, M. T., Jan 21 2010, In : FEBS Letters. 584, 2, p. 455-459 5 p.

Research output: Contribution to journalReview article

Amino Acyl-tRNA Synthetases
Transfer RNA
Catalytic Domain
Transfer RNA Aminoacylation
Aminoacylation

Towards the use of microfluidics for individual embryo culture

Krisher, R. L. & Wheeler, M. B., Jan 13 2010, In : Reproduction, Fertility and Development. 22, 1, p. 32-39 8 p.

Research output: Contribution to journalReview article

Microfluidics
embryo culture
embryo (animal)
Embryonic Structures
germ cells
2011

A review of the mechanical behavior of CaP and CaP/polymer composites for applications in bone replacement and repair

Wagoner Johnson, A. J. & Herschler, B. A., Jan 1 2011, In : Acta Biomaterialia. 7, 1, p. 16-30 15 p.

Research output: Contribution to journalReview article

Calcium phosphate
Scaffolds
Polymers
Bone
Repair

Arf6-dependent intracellular trafficking of pasteurella multocida toxin and pH-dependent translocation from late endosomes

Repella, T. L., Ho, M., Chong, T. P. M., Bannai, Y. & Wilson, B. A., Mar 1 2011, In : Toxins. 3, 3, p. 218-241 24 p.

Research output: Contribution to journalReview article

Pasteurella multocida
Cholera Toxin
Endosomes
Transferrin
Nocodazole

A triple threat to single molecules

Gruebele, M., Mar 1 2011, In : Nature Methods. 8, 3, p. 213-215 3 p.

Research output: Contribution to journalReview article

Protein folding
Molecules
Proteins
Fluorescence Resonance Energy Transfer

Behavior and the dynamic genome

Bell, A. M. & Robinson, G. E., Jun 3 2011, In : Science. 332, 6034, p. 1161-1162 2 p.

Research output: Contribution to journalReview article

Genome
Gene Expression
Brain

Canine and feline nasal tumors

Neumann, Z. L., Fan, T. M. & Looper, J., Aug 2011, In : Veterinary Medicine. 106, 8, p. 402-416 15 p.

Research output: Contribution to journalReview article

Felidae
Nose
Canidae
Cats
Dogs

Cellular and molecular action of the mitogenic protein-deamidating toxin from Pasteurella multocida

Wilson, B. A. & Ho, M., Dec 1 2011, In : FEBS Journal. 278, 23, p. 4616-4632 17 p.

Research output: Contribution to journalReview article

Pasteurella multocida
Chemical activation
GTP-Binding Proteins
Escherichia coli
Bordetella

Direct cellular peptidomics of hypothalamic neurons

Mitchell, J. W., Atkins, N., Sweedler, J. V. & Gillette, M. L., Oct 1 2011, In : Frontiers in Neuroendocrinology. 32, 4, p. 377-386 10 p.

Research output: Contribution to journalReview article

Neurons
Peptides
Cell signaling
Supraoptic Nucleus
Suprachiasmatic Nucleus

Engineering microbial factories for synthesis of value-added products

Du, J., Shao, Z. & Zhao, H., Aug 1 2011, In : Journal of Industrial Microbiology and Biotechnology. 38, 8, p. 873-890 18 p.

Research output: Contribution to journalReview article

Biofuels
Industrial plants
Synthetic Biology
Metabolic engineering
Metabolic Engineering

Fragile X family members have important and non-overlapping functions

Winograd, C. & Ceman, S., Oct 1 2011, In : Biomolecular Concepts. 2, 5, p. 343-352 10 p.

Research output: Contribution to journalReview article

Animals
Protein Interaction Domains and Motifs
Mammals
RNA-Binding Proteins
Alternative Splicing

General Action and Inaction Goals: Their Behavioral, Cognitive, and Affective Origins and Influences

Albarracin, D., Hepler, J. & Tannenbaum, M., Apr 1 2011, In : Current Directions in Psychological Science. 20, 2, p. 119-123 5 p.

Research output: Contribution to journalReview article

Motivation
Research Personnel
Psychology
Research
Power (Psychology)

Genome mining for ribosomally synthesized natural products

Velásquez, J. E. & van der Donk, W. A., Feb 1 2011, In : Current Opinion in Chemical Biology. 15, 1, p. 11-21 11 p.

Research output: Contribution to journalReview article

Biological Products
Genes
Genome
Peptides
Cyclotides

Gold nanorod crystal growth: From seed-mediated synthesis to nanoscale sculpting

Murphy, C. J., Thompson, L. B., Chernak, D. J., Yang, J. A., Sivapalan, S. T., Boulos, S. P., Huang, J., Alkilany, A. M. & Sisco, P. N., Apr 1 2011, In : Current Opinion in Colloid and Interface Science. 16, 2, p. 128-134 7 p.

Research output: Contribution to journalReview article

Crystallization
Nanorods
Crystal growth
Gold
nanorods

Health literacy: Critical opportunities for social work leadership in health care and research

Liechty, J. M., May 2011, In : Health and Social Work. 36, 2, p. 99-107 9 p.

Research output: Contribution to journalReview article

Health Literacy
Health Services Research
Social Work
social work
literacy
Photonic crystals
Biosensors
Modulators
Screening
Throughput

Label-free cell-based assays using photonic crystal optical biosensors

Shamah, S. M. & Cunningham, B. T., Mar 21 2011, In : Analyst. 136, 6, p. 1090-1102 13 p.

Research output: Contribution to journalReview article

Optics and Photonics
Biosensing Techniques
Photonic crystals
Biosensors
Labels

MicroRNAs: Meta-controllers of gene expression in synaptic activity emerge as genetic and diagnostic markers of human disease

Ceman, S. & Saugstad, J., Apr 2011, In : Pharmacology and Therapeutics. 130, 1, p. 26-37 12 p.

Research output: Contribution to journalReview article

MicroRNAs
Genetic Markers
Gene Expression
RNA-Induced Silencing Complex
Untranslated RNA

MicroRNAs in skeletal myogenesis

Ge, Y. & Chen, J., Feb 1 2011, In : Cell Cycle. 10, 3, p. 441-448 8 p.

Research output: Contribution to journalReview article

Muscle Development
MicroRNAs
Skeletal Muscle
Naphazoline
Biological Phenomena

Nanoscale studies of protein-membrane interactions in blood clotting

Morrissey, J. H., Tajkhorshid, E. & Rienstra, C. M., Jul 1 2011, In : Journal of Thrombosis and Haemostasis. 9, 1 S, p. 162-167 6 p.

Research output: Contribution to journalReview article

Blood Coagulation
Membrane Proteins
Membranes
Phosphatidylserines
Catalysis

Peritoneal dialysis versus hemodialysis: Risks, benefits, and access issues

Sinnakirouchenan, R. & Holley, J. L., Nov 1 2011, In : Advances in Chronic Kidney Disease. 18, 6, p. 428-432 5 p.

Research output: Contribution to journalReview article

Peritoneal Dialysis
Renal Dialysis
Dialysis
Central Venous Catheters
Costs and Cost Analysis