Research Output 1969 2020

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Review article
2016

New Insights into the Biosynthetic Logic of Ribosomally Synthesized and Post-translationally Modified Peptide Natural Products

Ortega, M. A. & Van Der Donk, W. A., Jan 21 2016, In : Cell chemical biology. 23, 1, p. 31-44 14 p.

Research output: Contribution to journalReview article

Biosynthesis
Biological Products
Synthetic Biology
Peptides
Biosynthetic Pathways

On Priming Action: Conclusions from a Meta-Analysis of the Behavioral Effects of Incidentally-Presented Words

Weingarten, E., Chen, Q., McAdams, M., Yi, J., Hepler, J. & Albarracin, D., Dec 1 2016, In : Current Opinion in Psychology. 12, p. 53-57 5 p.

Research output: Contribution to journalReview article

Meta-Analysis
Publications

Perspectives from man's best friend: National academy of medicine's workshop on comparative oncology

Leblanc, A. K., Breen, M., Choyke, P., Dewhirst, M., Fan, T. M., Gustafson, D. L., Helman, L. J., Kastan, M. B., Knapp, D. W., Levin, W. J., London, C., Mason, N., Mazcko, C., Olson, P. N., Page, R., Teicher, B. A., Thamm, D. H., Trent, J. M., Vail, D. M. & Khanna, C., Feb 3 2016, In : Science Translational Medicine. 8, 324, 324ps5.

Research output: Contribution to journalReview article

Medicine
Education
Research
Therapeutics
Surveys and Questionnaires

Polymers with autonomous life-cycle control

Patrick, J. F., Robb, M. J., Sottos, N. R., Moore, J. S. & White, S. R., Dec 14 2016, In : Nature. 540, 7633, p. 363-370 8 p.

Research output: Contribution to journalReview article

Life Cycle Stages
Tears
Polymers
Safety

Progesterone-Regulated Endometrial Factors Controlling Implantation

Bhurke, A. S., Bagchi, I. C. & Bagchi, M. K., Mar 1 2016, In : American Journal of Reproductive Immunology. 75, 3, p. 237-245 9 p.

Research output: Contribution to journalReview article

Progesterone Receptors
Progesterone
Protein Isoforms
Pregnancy
Critical Pathways

Quantitative imaging of cell membrane-associated effective mass density using Photonic Crystal Enhanced Microscopy (PCEM)

Zhuo, Y., Choi, J. S., Marin, T., Yu, H., Harley, B. A. & Cunningham, B. T., Nov 1 2016, In : Progress in Quantum Electronics. 50, p. 1-18 18 p.

Research output: Contribution to journalReview article

Cell membranes
Photonic crystals
Microscopic examination
photonics
microscopy

Quantum dot surface engineering: Toward inert fluorophores with compact size and bright, stable emission

Lim, S. J., Ma, L., Schleife, A. & Smith, A. M., Aug 1 2016, In : Coordination Chemistry Reviews. 320-321, p. 216-237 22 p.

Research output: Contribution to journalReview article

Fluorophores
Semiconductor quantum dots
quantum dots
engineering
Ligands

Recent Progress in Cancer Thermal Therapy Using Gold Nanoparticles

Abadeer, N. S. & Murphy, C. J., Mar 10 2016, In : Journal of Physical Chemistry C. 120, 9, p. 4691-4716 26 p.

Research output: Contribution to journalReview article

Gold
therapy
cancer
gold
Nanoparticles

Recommendations for real-time speech MRI

Lingala, S. G., Sutton, B. P., Miquel, M. E. & Nayak, K. S., Jan 1 2016, In : Journal of Magnetic Resonance Imaging. 43, 1, p. 28-44 17 p.

Research output: Contribution to journalReview article

Magnetic Resonance Imaging
Consensus
Los Angeles
Artifacts
Software
envelopes
Ultrasonics
Statistics
statistics
Imaging techniques

RNA secondary structure modulates FMRP’s bi-functional role in the microRNA pathway

Kenny, P. & Ceman, S., Jun 22 2016, In : International journal of molecular sciences. 17, 6, 985.

Research output: Contribution to journalReview article

RNA
MicroRNAs
Fragile X Mental Retardation Protein
proteins
Proteins

Single-cell analysis at the threshold

Chen, X., Love, J. C., Navin, N. E., Pachter, L., Stubbington, M. J. T., Svensson, V., Sweedler, J. V. & Teichmann, S. A., Nov 8 2016, In : Nature Biotechnology. 34, 11, p. 1111-1118 8 p.

Research output: Contribution to journalReview article

Microfluidics
Metabolomics

Standardization for natural product synthetic biology

Zhao, H. & Medema, M. H., Aug 2016, In : Natural Product Reports. 33, 8, p. 920-924 5 p.

Research output: Contribution to journalReview article

Synthetic Biology
Biological Products
Standardization
Multigene Family
Genes

Stress and burnout among gynecologic oncologists: A Society of Gynecologic Oncology Evidence-based Review and Recommendations

Cass, I., Duska, L. R., Blank, S. V., Cheng, G., duPont, N. C., Frederick, P. J., Hill, E. K., Matthews, C. M., Pua, T. L., Rath, K. S., Ruskin, R., Thaker, P. H., Berchuck, A., Gostout, B. S., Kushner, D. M. & Fowler, J. M., Nov 1 2016, In : Gynecologic Oncology. 143, 2, p. 421-427 7 p.

Research output: Contribution to journalReview article

Oncologists

Tandem reactions combining biocatalysts and chemical catalysts for asymmetric synthesis

Wang, Y. & Zhao, H., Dec 1 2016, In : Catalysts. 6, 12, 194.

Research output: Contribution to journalReview article

Biocatalysts
catalysts
Catalysis
Catalysts
catalysis

The enutrition academy: Supporting a newgeneration of nutritional scientistsaround the world

Geissler, C., Amuna, P., Kattelmann, K. K., Zotor, F. B. & Donovan, S. M., Jan 1 2016, In : Advances in Nutrition. 7, 1, p. 190-198 9 p.

Research output: Contribution to journalReview article

Learning
nutrition
learning
online courses
Nutritional Sciences

The many roles of glutamate in metabolism

Walker, M. C. & van der Donk, W. A., Mar 1 2016, In : Journal of Industrial Microbiology and Biotechnology. 43, 2-3, p. 419-430 12 p.

Research output: Contribution to journalReview article

Metabolism
Amino acids
Glutamic Acid
Bioremediation
Biosynthesis

Use of genome-editing tools to treat sickle cell disease

Tasan, I., Jain, S. & Zhao, H., Sep 1 2016, In : Human Genetics. 135, 9, p. 1011-1028 18 p.

Research output: Contribution to journalReview article

Sickle Cell Anemia
Globins
CRISPR-Associated Proteins
Therapeutics
Clustered Regularly Interspaced Short Palindromic Repeats
2015

2013 Scientific Sessions Sol Sherry Distinguished Lecture in Thrombosis Polyphosphate: A Novel Modulator of Hemostasis and Thrombosis

Smith, S. A. & Morrissey, J. H., Jun 27 2015, In : Arteriosclerosis, Thrombosis, and Vascular Biology. 35, 6, p. 1298-1305 8 p.

Research output: Contribution to journalReview article

Polyphosphates
Polymethyl Methacrylate
Hemostasis
Thrombosis
Blood Coagulation

Ambient ionisation mass spectrometry for lipid profiling and structural analysis of mammalian oocytes, preimplantation embryos and stem cells

Ferreira, C. R., Jarmusch, A. K., Pirro, V., Alfaro, C. M., González-Serrano, A. F., Niemann, H., Wheeler, M. B., Rabel, R. A. C., Hallett, J. E., Houser, R., Kaufman, A. & Cooks, R. G., Jan 1 2015, In : Reproduction, Fertility and Development. 27, 4, p. 621-637 17 p.

Research output: Contribution to journalReview article

Blastocyst
ionization
Oocytes
stem cells
Mass Spectrometry

Analytics for vaccine economics and pricing: Insights and observations

Robbins, M. J. & Jacobson, S. H., Apr 1 2015, In : Expert review of vaccines. 14, 4, p. 605-616 12 p.

Research output: Contribution to journalReview article

Vaccines
Economics
Costs and Cost Analysis
Immunization Programs
Operations Research

A review of inter-and intraspecific variation in the eutherian placenta

Gundling, W. E. & Wildman, D. E., Mar 5 2015, In : Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 1663

Research output: Contribution to journalReview article

Obstetrics
placenta
Placenta
Nutrition
Mothers

Building biological foundries for next-generation synthetic biology

Chao, R., Yuan, Y. B. & Zhao, H., Jul 24 2015, In : Science China Life Sciences. 58, 7, p. 658-665 8 p.

Research output: Contribution to journalReview article

Synthetic Biology
synthetic biology
Foundries
top-down approach
Rapid prototyping

Comparative aspects of osteosarcoma pathogenesis in humans and dogs

Fan, T. M. & Khanna, C., Sep 1 2015, In : Veterinary Sciences. 2, 3, p. 210-230 21 p.

Research output: Contribution to journalReview article

osteosarcoma
Osteosarcoma
pathogenesis
Dogs
dogs

Computational characterization of structural dynamics underlying function in active membrane transporters

Li, J., Wen, P. C., Moradi, M. & Tajkhorshid, E., Apr 1 2015, In : Current Opinion in Structural Biology. 31, p. 96-105 10 p.

Research output: Contribution to journalReview article

Membrane Transport Proteins
Active Biological Transport
Molecular Dynamics Simulation
Hydrolysis
Adenosine Triphosphate

Consensus clinical practice guidelines for the diagnosis and treatment of restless legs syndrome/Willis-Ekbom disease during pregnancy and lactation

On behalf of the International Restless Legs Syndrome Study Group (IRLSSG), Aug 1 2015, In : Sleep Medicine Reviews. 22, p. 64-77 14 p.

Research output: Contribution to journalReview article

Restless Legs Syndrome
Practice Guidelines
Lactation
Consensus
Pregnancy

Covert rapid action-memory simulation (CRAMS): A hypothesis of hippocampal-prefrontal interactions for adaptive behavior

Wang, J. X., Cohen, N. J. & Voss, J. L., Jan 1 2015, In : Neurobiology of Learning and Memory. 117, p. 22-33 12 p.

Research output: Contribution to journalReview article

Psychological Adaptation
Hippocampus
Behavior Control
Prefrontal Cortex
Decision Making

Degenerative lumbar scoliosis

Koerner, J. D., Reitman, C. A., Arnold, P. M. & Rihn, J., Apr 2015, In : JBJS Reviews. 3, 4, p. 1-10 10 p., e1.

Research output: Contribution to journalReview article

Scoliosis
Decompression
Pathologic Constriction
Pain
Population

Dissecting diversity in the social brain

Robinson, G. E., Dec 11 2015, In : Science. 350, 6266, p. 1310-1312 3 p.

Research output: Contribution to journalReview article

Animal Sexual Behavior
Vasopressin Receptors
Arvicolinae
sexual behavior
Social Behavior

Encoding and decoding with prior knowledge: From SLIM to SPICE

Ma, C., Lam, F. & Liang, Z-P., 2015, In : eMagRes. 4, 2, p. 535-542 8 p.

Research output: Contribution to journalReview article

SPICE
Computer-Assisted Image Processing
Decoding
Fourier Analysis
Magnetic Resonance Imaging
mental health
adolescent
psychosocial development
American
school

Fast-folding proteins under stress

Dave, K. & Gruebele, M., Nov 1 2015, In : Cellular and Molecular Life Sciences. 72, 22, p. 4273-4285 13 p.

Research output: Contribution to journalReview article

Protein Folding
Heat-Shock Proteins
Pressure
Proteins
Temperature

How it all starts: Initiation of the clotting cascade

Smith, S. A., Travers, R. J. & Morrissey, J. H., Jul 4 2015, In : Critical Reviews in Biochemistry and Molecular Biology. 50, 4, p. 326-336 11 p.

Research output: Contribution to journalReview article

Thrombosis
Blood
Blood Coagulation
Hemostasis
Thromboplastin

How streams of communication reproduce and change institutional logics: The role of categories

Ocasio, W., Loewenstein, J. & Nigam, A., Jan 1 2015, In : Academy of Management Review. 40, 1, p. 28-48 21 p.

Research output: Contribution to journalReview article

Communication
Institutional logics
Sensegiving
Remedies
Theorizing

Iatrogenic neurologic deficit after lumbar spine surgery: A review

Ghobrial, G. M., Williams, K. A., Arnold, P., Fehlings, M. & Harrop, J. S., Dec 1 2015, In : Clinical Neurology and Neurosurgery. 139, p. 76-80 5 p., 4164.

Research output: Contribution to journalReview article

Radiculopathy
Neurologic Manifestations
Spine
Nervous System Trauma
Spinal Cord Compression

Improving and repurposing biocatalysts via directed evolution

Denard, C. A., Ren, H. & Zhao, H., Apr 1 2015, In : Current Opinion in Chemical Biology. 25, p. 55-64 10 p.

Research output: Contribution to journalReview article

Enzymes
Biocatalysis
Protein Engineering
Stereoselectivity
Chemical reactivity

Introduction to the second global summit on the health effects of yogurt

Shamir, R. & Donovan, S. M., Jan 1 2015, In : Nutrition reviews. 73, p. 1-3 3 p.

Research output: Contribution to journalReview article

Yogurt
Health

Invited review: Evolution of meat animal growth research during the past 50 years: Adipose and muscle stem cells

Dodson, M. V., Allen, R. E., Du, M., Bergen, W. G., Velleman, S. G., Poulos, S. P., Fernyhough-Culver, M., Wheeler, M. B., Duckett, S. K., Young, M. R. I., Voy, B. H., Jiang, Z. & Hausman, G. J., Feb 23 2015, In : Journal of animal science. 93, 2, p. 457-481 25 p.

Research output: Contribution to journalReview article

animal growth
food animals
Meat
myocytes
Muscle Cells

Label-free biosensor imaging on photonic crystal surfaces

Zhuo, Y. & Cunningham, B. T., Aug 28 2015, In : Sensors (Switzerland). 15, 9, p. 21613-21635 23 p.

Research output: Contribution to journalReview article

Optics and Photonics
Biosensing Techniques
Photonic crystals
bioinstrumentation
crystal surfaces

Mass spectrometry-based characterization of endogenous peptides and metabolites in small volume samples

Ong, T. H., Tillmaand, E. G., Makurath, M., Rubakhin, S. S. & Sweedler, J. V., Jul 1 2015, In : Biochimica et Biophysica Acta - Proteins and Proteomics. 1854, 7, p. 732-740 9 p.

Research output: Contribution to journalReview article

Metabolites
Mass spectrometry
Mass Spectrometry
Peptides
Assays

Minimum Information about a Biosynthetic Gene cluster

Medema, M. H., Kottmann, R., Yilmaz, P., Cummings, M., Biggins, J. B., Blin, K., De Bruijn, I., Chooi, Y. H., Claesen, J., Coates, R. C., Cruz-Morales, P., Duddela, S., Düsterhus, S., Edwards, D. J., Fewer, D. P., Garg, N., Geiger, C., Gomez-Escribano, J. P., Greule, A., Hadjithomas, M. & 134 others, Haines, A. S., Helfrich, E. J. N., Hillwig, M. L., Ishida, K., Jones, A. C., Jones, C. S., Jungmann, K., Kegler, C., Kim, H. U., Kötter, P., Krug, D., Masschelein, J., Melnik, A. V., Mantovani, S. M., Monroe, E. A., Moore, M., Moss, N., Nützmann, H. W., Pan, G., Pati, A., Petras, D., Reen, F. J., Rosconi, F., Rui, Z., Tian, Z., Tobias, N. J., Tsunematsu, Y., Wiemann, P., Wyckoff, E., Yan, X., Yim, G., Yu, F., Xie, Y., Aigle, B., Apel, A. K., Balibar, C. J., Balskus, E. P., Barona-Gómez, F., Bechthold, A., Bode, H. B., Borriss, R., Brady, S. F., Brakhage, A. A., Caffrey, P., Cheng, Y. Q., Clardy, J., Cox, R. J., De Mot, R., Donadio, S., Donia, M. S., Van Der Donk, W. A., Dorrestein, P. C., Doyle, S., Driessen, A. J. M., Ehling-Schulz, M., Entian, K. D., Fischbach, M. A., Gerwick, L., Gerwick, W. H., Gross, H., Gust, B., Hertweck, C., Höfte, M., Jensen, S. E., Ju, J., Katz, L., Kaysser, L., Klassen, J. L., Keller, N. P., Kormanec, J., Kuipers, O. P., Kuzuyama, T., Kyrpides, N. C., Kwon, H. J., Lautru, S., Lavigne, R., Lee, C. Y., Linquan, B., Liu, X., Liu, W., Luzhetskyy, A., Mahmud, T., Mast, Y., Méndez, C., Metsä-Ketelä, M., Micklefield, J., Mitchell, D. A., Moore, B. S., Moreira, L. M., Müller, R., Neilan, B. A., Nett, M., Nielsen, J., O'Gara, F., Oikawa, H., Osbourn, A., Osburne, M. S., Ostash, B., Payne, S. M., Pernodet, J. L., Petricek, M., Piel, J., Ploux, O., Raaijmakers, J. M., Salas, J. A., Schmitt, E. K., Scott, B., Seipke, R. F., Shen, B., Sherman, D. H., Sivonen, K., Smanski, M. J., Sosio, M., Stegmann, E., Süssmuth, R. D., Tahlan, K., Thomas, C. M., Tang, Y., Truman, A. W., Viaud, M., Walton, J. D., Walsh, C. T., Weber, T., Van Wezel, G. P., Wilkinson, B., Willey, J. M., Wohlleben, W., Wright, G. D., Ziemert, N., Zhang, C., Zotchev, S. B., Breitling, R., Takano, E. & Glöckner, F. O., Aug 18 2015, In : Nature chemical biology. 11, 9, p. 625-631 7 p.

Research output: Contribution to journalReview article

Multigene Family
Information Storage and Retrieval
Fungi
Bacteria

Obsessive-Compulsive Disorder Is Associated With Broad Impairments in Executive Function: A Meta-Analysis

Snyder, H. R., Kaiser, R. H., Warren, S. L. & Heller, W., Mar 1 2015, In : Clinical Psychological Science. 3, 2, p. 301-330 30 p.

Research output: Contribution to journalReview article

Obsessive-Compulsive Disorder
Executive Function
Meta-Analysis
Corpus Striatum
Healthy Volunteers

Peptidomics for the discovery and characterization of neuropeptides and hormones

Romanova, E. V. & Sweedler, J. V., Sep 12 2015, In : Trends in Pharmacological Sciences. 36, 9, p. 579-586 8 p.

Research output: Contribution to journalReview article

G-Protein-Coupled Receptors
Neuropeptides
Hormones
Orphaned Children
Endocrine System

Polyphosphate, platelets, and coagulation

Travers, R. J., Smith, S. A. & Morrissey, J. H., May 1 2015, In : International Journal of Laboratory Hematology. 37, S1, p. 31-35 5 p.

Research output: Contribution to journalReview article

Polyphosphates
Platelets
Coagulation
Blood Platelets
Inflammation

Polyphosphate as modulator of hemostasis, thrombosis, and inflammation

Morrissey, J. H. & Smith, S. A., Jun 1 2015, In : Journal of Thrombosis and Haemostasis. 13, S1, p. S92-S97

Research output: Contribution to journalReview article

Polyphosphates
Hemostasis
Thrombosis
Polyps
Inflammation

Progress in Cherenkov femtosecond fiber lasers

Liu, X., Svane, A. S., Lægsgaard, J., Tu, H., Boppart, S. A. & Turchinovich, D., Dec 9 2015, In : Journal of Physics D: Applied Physics. 49, 2, 023001.

Research output: Contribution to journalReview article

Fiber lasers
fiber lasers
Lasers
wavelengths
Wavelength

Rapid prototyping of microbial cell factories via genome-scale engineering

Si, T., Xiao, H. & Zhao, H., Nov 15 2015, In : Biotechnology Advances. 33, 7, p. 1420-1432 13 p.

Research output: Contribution to journalReview article

Rapid prototyping
Industrial plants
Genes
Genome
Biological systems

Recent advances in combinatorial biosynthesis for drug discovery

Sun, H., Liu, Z., Zhao, H. & Ang, E. L., Feb 12 2015, In : Drug Design, Development and Therapy. 9, p. 823-833 11 p.

Research output: Contribution to journalReview article

Drug Discovery
Biological Products
Biosynthetic Pathways
Pharmaceutical Preparations
Poisons

Regulatory RNA-assisted genome engineering in microorganisms

Si, T., HamediRad, M. & Zhao, H., Dec 1 2015, In : Current Opinion in Biotechnology. 36, p. 85-90 6 p.

Research output: Contribution to journalReview article

RNA
Microorganisms
Genes
Genome
Microbial Genome

Rethinking the restriction on nutrition during hemodialysis treatment

Kistler, B. M., Fitschen, P. J., Ikizler, T. A. & Wilund, K. R., Mar 1 2015, In : Journal of Renal Nutrition. 25, 2, p. 81-87 7 p.

Research output: Contribution to journalReview article

Renal Dialysis
Nutritional Status
Therapeutics
Practice Guidelines
Eating