Research Output 1972 2020

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Review article
2017

Ribosomally synthesized and post-translationally modified peptide natural product discovery in the genomic era

Hetrick, K. J. & van der Donk, W. A., Jun 1 2017, In : Current Opinion in Chemical Biology. 38, p. 36-44 9 p.

Research output: Contribution to journalReview article

Biological Products
Genes
Genome
Bacterial Genomes
Peptides

Targeting Specificity of the CRISPR/Cas9 System

Tasan, I. & Zhao, H., Sep 15 2017, In : ACS synthetic biology. 6, 9, p. 1609-1613 5 p.

Research output: Contribution to journalReview article

Clustered Regularly Interspaced Short Palindromic Repeats
Genes
Mutagenesis
Target tracking
Standardization

The Natural History of Degenerative Cervical Myelopathy and the Rate of Hospitalization Following Spinal Cord Injury: An Updated Systematic Review

Tetreault, L. A., Karadimas, S., Wilson, J. R., Arnold, P. M., Kurpad, S., Dettori, J. R. & Fehlings, M. G., Sep 1 2017, In : Global Spine Journal. 7, 3_supplement, p. 28S-34S

Research output: Contribution to journalReview article

Open Access
Spinal Cord Diseases
Spinal Cord Injuries
Hospitalization
Ossification of Posterior Longitudinal Ligament
Natural History

The role of early life nutrition in the establishment of gastrointestinal microbial composition and function

Davis, E. C., Wang, M. & Donovan, S. M., Mar 4 2017, In : Gut Microbes. 8, 2, p. 143-171 29 p.

Research output: Contribution to journalReview article

Dysbiosis
Prebiotics
Infant Formula
Microbiota
Probiotics

The ultrastructure of bone and its relevance to mechanical properties

Schwarcz, H. P., Abueidda, D. & Jasiuk, I. M., Sep 5 2017, In : Frontiers in Physics. 5, SEP, 39.

Research output: Contribution to journalReview article

Ultrastructure
Bone
bones
Mechanical Properties
Minerals

Thoracic duct injury following cervical Spine surgery: A multicenter retrospective review

Derakhshan, A., Lubelski, D., Steinmetz, M. P., Corriveau, M., Lee, S., Pace, J. R., Smith, G. A., Gokaslan, Z., Bydon, M., Arnold, P. M., Fehlings, M. G., Riew, K. D. & Mroz, T. E., Apr 1 2017, In : Global Spine Journal. 7, 1_suppl, p. 115S-119S

Research output: Contribution to journalReview article

Open Access
Thoracic Duct
Thoracic Injuries
Spine
Diskectomy
Lymphatic Vessels

Use of Pig as a Model for Mesenchymal Stem Cell Therapies for Bone Regeneration

Rubessa, M., Polkoff, K., Bionaz, M., Monaco, E., Milner, D. J., Holllister, S. J., Goldwasser, M. S. & Wheeler, M. B., Oct 2 2017, In : Animal Biotechnology. 28, 4, p. 275-287 13 p.

Research output: Contribution to journalReview article

Bone Regeneration
Cell- and Tissue-Based Therapy
Stem cells
Mesenchymal Stromal Cells
stem cells

Using natural products for drug discovery: the impact of the genomics era

Zhang, M. M., Qiao, Y., Ang, E. L. & Zhao, H., May 4 2017, In : Expert Opinion on Drug Discovery. 12, 5, p. 475-487 13 p.

Research output: Contribution to journalReview article

Drug Discovery
Genomics
Biological Products
Synthetic Biology
Metagenomics

Virtual Issue on Metal-Halide Perovskite Nanocrystals - A Bright Future for Optoelectronics

Buriak, J. M., Kamat, P. V., Schanze, K. S., Alivisatos, A. P., Murphy, C. J., Schatz, G. C., Scholes, G. D., Stang, P. J. & Weiss, P. S., Nov 14 2017, In : Chemistry of Materials. 29, 21, p. 8915-8917 3 p.

Research output: Contribution to journalReview article

Metal halides
Optoelectronic devices
Nanocrystals
perovskite
2016

A brief overview of synthetic biology research programs and roadmap studies in the United States

Si, T. & Zhao, H., Dec 1 2016, In : Synthetic and Systems Biotechnology. 1, 4, p. 258-264 7 p.

Research output: Contribution to journalReview article

Synthetic Biology
Research
Government Agencies
Biological systems

Accelerated genome engineering through multiplexing

Bao, Z., Cobb, R. E. & Zhao, H., Jan 1 2016, In : Wiley Interdisciplinary Reviews: Systems Biology and Medicine. 8, 1, p. 5-21 17 p.

Research output: Contribution to journalReview article

Multiplexing
Genes
Genome
Bioengineering
Biological Science Disciplines

ACS Catalysis and the Scope of Papers Sought in Three Catalysis Subdisciplines: Biocatalysis and Enzymology, Molecular Catalysis for Organic Synthesis, and Heterogeneous Photocatalysis

Chang, S., Fornasiero, P., Gunnoe, T. B., Jones, C. W., Linic, S., Ooi, T., Williams, R. M. & Zhao, H., Jul 1 2016, In : ACS Catalysis. 6, 7, p. 4782-4785 4 p.

Research output: Contribution to journalReview article

Photocatalysis
Catalysis
Biocatalysis

Adoptive T Cell Therapies: A Comparison of T Cell Receptors and Chimeric Antigen Receptors

Harris, D. T. & Kranz, D. M., Mar 1 2016, In : Trends in Pharmacological Sciences. 37, 3, p. 220-230 11 p.

Research output: Contribution to journalReview article

Antigen Receptors
T-cells
Cell- and Tissue-Based Therapy
T-Cell Antigen Receptor
T-Lymphocytes

Analytical capabilities of mass spectrometry imaging and its potential applications in food science

Li, B., Dunham, S. J. B., Dong, Y., Yoon, S., Zeng, M. & Sweedler, J. V., Jan 1 2016, In : Trends in Food Science and Technology. 47, p. 50-63 14 p.

Research output: Contribution to journalReview article

Food Technology
food science
Mass Spectrometry
image analysis
mass spectrometry

Cameo appearances of aminoacyl-tRNA in natural product biosynthesis

Ulrich, E. C. & van der Donk, W. A., Dec 1 2016, In : Current Opinion in Chemical Biology. 35, p. 29-36 8 p.

Research output: Contribution to journalReview article

Biosynthesis
Transfer RNA
Biological Products
Genes
Enzymes

Childhood Markers of Health Behavior Relate to Hippocampal Health, Memory, and Academic Performance

Hassevoort, K. M., Khan, N. A., Hillman, C. H. & Cohen, N. J., Sep 1 2016, In : Mind, Brain, and Education. 10, 3, p. 162-170 9 p.

Research output: Contribution to journalReview article

Health Behavior
health behavior
Life Style
brain
childhood

Conservative Care of the Elderly CKD Patient: A Practical Guide

Raghavan, D. & Holley, J. L., Jan 1 2016, In : Advances in Chronic Kidney Disease. 23, 1, p. 51-56 6 p.

Research output: Contribution to journalReview article

Dialysis
Advance Care Planning
Palliative Care
Chronic Kidney Failure
Kidney

Considerations of Environmentally Relevant Test Conditions for Improved Evaluation of Ecological Hazards of Engineered Nanomaterials

Holden, P. A., Gardea-Torresdey, J. L., Klaessig, F., Turco, R. F., Mortimer, M., Hund-Rinke, K., Cohen Hubal, E. A., Avery, D., Barceló, D., Behra, R., Cohen, Y., Deydier-Stephan, L., Ferguson, P. L., Fernandes, T. F., Herr Harthorn, B., Henderson, W. M., Hoke, R. A., Hristozov, D., Johnston, J. M., Kane, A. B. & 20 others, Kapustka, L., Keller, A. A., Lenihan, H. S., Lovell, W., Murphy, C. J., Nisbet, R. M., Petersen, E. J., Salinas, E. R., Scheringer, M., Sharma, M., Speed, D. E., Sultan, Y., Westerhoff, P., White, J. C., Wiesner, M. R., Wong, E. M., Xing, B., Steele Horan, M., Godwin, H. A. & Nel, A. E., Jun 21 2016, In : Environmental Science and Technology. 50, 12, p. 6124-6145 22 p.

Research output: Contribution to journalReview article

Nanostructured materials
Hazards
hazard
ecotoxicology
hazard assessment

Contact-facilitated drug delivery with Sn2 lipase labile prodrugs optimize targeted lipid nanoparticle drug delivery

Pan, D., Pham, C. T. N., Weilbaecher, K. N., Tomasson, M. H., Wickline, S. A. & Lanza, G. M., Jan 1 2016, In : Wiley Interdisciplinary Reviews: Nanomedicine and Nanobiotechnology. 8, 1, p. 85-106 22 p.

Research output: Contribution to journalReview article

Medical nanotechnology
Phospholipids
Prodrugs
Lipases
Lipase

Creation of an NCI comparative brain tumor consortium: Informing the translation of new knowledge from canine to human brain tumor patients

Leblanc, A. K., Mazcko, C., Brown, D. E., Koehler, J. W., Miller, A. D., Miller, C. R., Bentley, R. T., Packer, R. A., Breen, M., Boudreau, C. E., Levine, J. M., Simpson, R. M., Halsey, C., Kisseberth, W., Rossmeisl, J. H., Dickinson, P. J., Fan, T. M., Corps, K., Aldape, K., Puduvalli, V. & 2 others, Pluhar, G. E. & Gilbert, M. R., Sep 1 2016, In : Neuro-Oncology. 18, 9, p. 1209-1218 10 p.

Research output: Contribution to journalReview article

Translational Medical Research
Brain Neoplasms
Canidae
National Institutes of Health (U.S.)
Glioma

Droplet-based biosensing for lab-on-a-chip, open microfluidics platforms

Dak, P., Ebrahimi, A., Swaminathan, V., Duarte-Guevara, C., Bashir, R. & Alam, M. A., Jan 1 2016, In : Biosensors. 6, 2, 14.

Research output: Contribution to journalReview article

Lab-on-a-chip
Microfluidics
Biosensing Techniques
Biosensors
Costs and Cost Analysis

Electrical Chips for Biological Point-of-Care Detection

Reddy, B., Salm, E. & Bashir, R., Jul 11 2016, In : Annual Review of Biomedical Engineering. 18, p. 329-355 27 p.

Research output: Contribution to journalReview article

Point-of-Care Systems
Biochips
Lab-on-a-chip
Multiplexing
Health care

Engineering microbial hosts for production of bacterial natural products

Zhang, M. M., Wang, Y., Ang, E. L. & Zhao, H., Aug 2016, In : Natural Product Reports. 33, 8, p. 963-987 25 p.

Research output: Contribution to journalReview article

Biological Products
Genetic Engineering
Actinobacteria
Genomics
Genetic engineering

Engineering Synthetic Gene Circuits in Living Cells with CRISPR Technology

Jusiak, B., Cleto, S., Perez-Piñera, P. & Lu, T. K., Jul 1 2016, In : Trends in Biotechnology. 34, 7, p. 535-547 13 p.

Research output: Contribution to journalReview article

Clustered Regularly Interspaced Short Palindromic Repeats
Synthetic Genes
Gene Regulatory Networks
Genes
Cells

Epigenetic targeting of platinum resistant testicular cancer

Sonnenburg, D., Spinella, M. J. & Albany, C., Nov 1 2016, In : Current Cancer Drug Targets. 16, 9, p. 789-795 7 p.

Research output: Contribution to journalReview article

Testicular Neoplasms
Platinum
Epigenomics
DNA Methylation
Germ Cell and Embryonal Neoplasms

Exercise and gut immune function: Evidence of alterations in colon immune cell homeostasis and microbiome characteristics with exercise training

Cook, M. D., Allen, J. M., Pence, B. D., Wallig, M. A., Gaskins, H. R., White, B. A. & Woods, J. A., Feb 1 2016, In : Immunology and Cell Biology. 94, 2, p. 158-163 6 p.

Research output: Contribution to journalReview article

Microbiota
Colon
Homeostasis
Dysbiosis
Exercise

Family correlates of childhood binge eating: A systematic review

Saltzman, J. A. & Liechty, J. M., Aug 1 2016, In : Eating Behaviors. 22, p. 62-71 10 p.

Research output: Contribution to journalReview article

Bulimia
Weights and Measures
Binge-Eating Disorder
Education
Thinness

From infancy to aging: Biological and behavioral modifiers of Fetuin-A

Robinson, K. N. & Teran-Garcia, M., May 1 2016, In : Biochimie. 124, p. 141-149 9 p.

Research output: Contribution to journalReview article

alpha-2-HS-Glycoprotein
Aging of materials
Life Cycle Stages
Pharmacological Biomarkers
Life cycle

Gut microbiota: Modulation of host physiology in obesity

Nehra, V., Allen, J. M., Mailing, L. J., Kashyap, P. C. & Woods, J. A., Sep 2016, In : Physiology. 31, 5, p. 327-335 9 p.

Research output: Contribution to journalReview article

Microbiota
Obesity
Dysbiosis
Symbiosis
Adiposity

Impact of early gut microbiota on immune and metabolic development and function

Wang, M., Siegel, M. H. & Donovan, S. M., Dec 1 2016, In : Seminars in Fetal and Neonatal Medicine. 21, 6, p. 380-387 8 p.

Research output: Contribution to journalReview article

Prebiotics
Microbiota
Metabolic Diseases
Immune System Diseases
Probiotics

Impact of Obstructive Sleep Apnea on Neurocognitive Function and Impact of Continuous Positive Air Pressure

Davies, C. R. & Harrington, J. J., Sep 1 2016, In : Sleep Medicine Clinics. 11, 3, p. 287-298 12 p.

Research output: Contribution to journalReview article

Air Pressure
Obstructive Sleep Apnea
Diffusion Tensor Imaging
Sleep Deprivation
Executive Function

Influence of exercise and aging on extracellular matrix composition in the skeletal muscle stem cell niche

Garg, K. & Boppart, M. D., Nov 2016, In : Journal of Applied Physiology. 121, 5, p. 1053-1058 6 p.

Research output: Contribution to journalReview article

Stem Cell Niche
Muscle Cells
Extracellular Matrix
Skeletal Muscle
Stem Cells

Magnetomotive Optical Coherence Elastography for Magnetic Hyperthermia Dosimetry Based on Dynamic Tissue Biomechanics

Huang, P. C., Pande, P., Ahmad, A., Marjanovic, M., Spillman, D. R., Odintsov, B. & Boppart, S. A., Jul 2016, In : IEEE Journal of Selected Topics in Quantum Electronics. 22, 4, 7355327.

Research output: Contribution to journalReview article

biodynamics
Biomechanics
hyperthermia
Dosimetry
dosimeters

Medical diagnostics with mobile devices: Comparison of intrinsic and extrinsic sensing

Kwon, L., Long, K. D., Wan, Y., Yu, H. & Cunningham, B. T., May 1 2016, In : Biotechnology Advances. 34, 3, p. 291-304 14 p.

Research output: Contribution to journalReview article

Point-of-Care Systems
Handheld Computers
Precision Medicine
Mobile devices
Equipment and Supplies

Modelling of bone fracture and strength at different length scales: A review

Sabet, F. A., Najafi, A. R., Hamed, E. & Jasiuk, I., Feb 6 2016, In : Interface Focus. 6, 1, 20150055.

Research output: Contribution to journalReview article

Bone Fractures
Bone
Bone and Bones
Bone Diseases
Osteoporosis

NanoEHS - Defining fundamental science needs: No easy feat when the simple itself is complex

Grassian, V. H., Haes, A. J., Mudunkotuwa, I. A., Demokritou, P., Kane, A. B., Murphy, C. J., Hutchison, J. E., Isaacs, J. A., Jun, Y. S., Karn, B., Khondaker, S. I., Larsen, S. C., Lau, B. L. T., Pettibone, J. M., Sadik, O. A., Saleh, N. B. & Teague, C., Feb 1 2016, In : Environmental Science: Nano. 3, 1, p. 15-27 13 p.

Research output: Contribution to journalReview article

nanotechnology
Nanostructured materials
Nanotechnology
catalysis
information technology

New Insights into the Biosynthetic Logic of Ribosomally Synthesized and Post-translationally Modified Peptide Natural Products

Ortega, M. A. & van der Donk, W. A., Jan 21 2016, In : Cell chemical biology. 23, 1, p. 31-44 14 p.

Research output: Contribution to journalReview article

Biosynthesis
Biological Products
Synthetic Biology
Peptides
Biosynthetic Pathways

On Priming Action: Conclusions from a Meta-Analysis of the Behavioral Effects of Incidentally-Presented Words

Weingarten, E., Chen, Q., McAdams, M., Yi, J., Hepler, J. & Albarracin, D., Dec 1 2016, In : Current Opinion in Psychology. 12, p. 53-57 5 p.

Research output: Contribution to journalReview article

Meta-Analysis
Publications

Perspectives from man's best friend: National academy of medicine's workshop on comparative oncology

Leblanc, A. K., Breen, M., Choyke, P., Dewhirst, M., Fan, T. M., Gustafson, D. L., Helman, L. J., Kastan, M. B., Knapp, D. W., Levin, W. J., London, C., Mason, N., Mazcko, C., Olson, P. N., Page, R., Teicher, B. A., Thamm, D. H., Trent, J. M., Vail, D. M. & Khanna, C., Feb 3 2016, In : Science Translational Medicine. 8, 324, 324ps5.

Research output: Contribution to journalReview article

Medicine
Education
Research
Therapeutics
Surveys and Questionnaires

Polymers with autonomous life-cycle control

Patrick, J. F., Robb, M. J., Sottos, N. R., Moore, J. S. & White, S. R., Dec 14 2016, In : Nature. 540, 7633, p. 363-370 8 p.

Research output: Contribution to journalReview article

Life Cycle Stages
Tears
Polymers
Safety

Progesterone-Regulated Endometrial Factors Controlling Implantation

Bhurke, A. S., Bagchi, I. C. & Bagchi, M. K., Mar 1 2016, In : American Journal of Reproductive Immunology. 75, 3, p. 237-245 9 p.

Research output: Contribution to journalReview article

Progesterone Receptors
Progesterone
Protein Isoforms
Pregnancy
Critical Pathways

Quantitative imaging of cell membrane-associated effective mass density using Photonic Crystal Enhanced Microscopy (PCEM)

Zhuo, Y., Choi, J. S., Marin, T., Yu, H., Harley, B. A. & Cunningham, B. T., Nov 1 2016, In : Progress in Quantum Electronics. 50, p. 1-18 18 p.

Research output: Contribution to journalReview article

Cell membranes
Photonic crystals
Microscopic examination
photonics
microscopy

Quantum dot surface engineering: Toward inert fluorophores with compact size and bright, stable emission

Lim, S. J., Ma, L., Schleife, A. & Smith, A. M., Aug 1 2016, In : Coordination Chemistry Reviews. 320-321, p. 216-237 22 p.

Research output: Contribution to journalReview article

Fluorophores
Semiconductor quantum dots
quantum dots
engineering
Ligands

Recent Progress in Cancer Thermal Therapy Using Gold Nanoparticles

Abadeer, N. S. & Murphy, C. J., Mar 10 2016, In : Journal of Physical Chemistry C. 120, 9, p. 4691-4716 26 p.

Research output: Contribution to journalReview article

Gold
therapy
cancer
gold
Nanoparticles

Recommendations for real-time speech MRI

Lingala, S. G., Sutton, B. P., Miquel, M. E. & Nayak, K. S., Jan 1 2016, In : Journal of Magnetic Resonance Imaging. 43, 1, p. 28-44 17 p.

Research output: Contribution to journalReview article

Magnetic Resonance Imaging
Consensus
Los Angeles
Artifacts
Software
envelopes
Ultrasonics
Statistics
statistics
Imaging techniques

RNA secondary structure modulates FMRP’s bi-functional role in the microRNA pathway

Kenny, P. & Ceman, S., Jun 22 2016, In : International journal of molecular sciences. 17, 6, 985.

Research output: Contribution to journalReview article

RNA
MicroRNAs
Fragile X Mental Retardation Protein
proteins
Proteins

Single-cell analysis at the threshold

Chen, X., Love, J. C., Navin, N. E., Pachter, L., Stubbington, M. J. T., Svensson, V., Sweedler, J. V. & Teichmann, S. A., Nov 8 2016, In : Nature Biotechnology. 34, 11, p. 1111-1118 8 p.

Research output: Contribution to journalReview article

Microfluidics
Metabolomics

Standardization for natural product synthetic biology

Zhao, H. & Medema, M. H., Aug 2016, In : Natural Product Reports. 33, 8, p. 920-924 5 p.

Research output: Contribution to journalReview article

Synthetic Biology
Biological Products
Standardization
Multigene Family
Genes

Stress and burnout among gynecologic oncologists: A Society of Gynecologic Oncology Evidence-based Review and Recommendations

Cass, I., Duska, L. R., Blank, S. V., Cheng, G., duPont, N. C., Frederick, P. J., Hill, E. K., Matthews, C. M., Pua, T. L., Rath, K. S., Ruskin, R., Thaker, P. H., Berchuck, A., Gostout, B. S., Kushner, D. M. & Fowler, J. M., Nov 1 2016, In : Gynecologic Oncology. 143, 2, p. 421-427 7 p.

Research output: Contribution to journalReview article

Oncologists