Research Output 1969 2020

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Review article
2018

Incorporating DNA Methyltransferase Inhibitors (DNMTis) in the Treatment of Genitourinary Malignancies: A Systematic Review

Chovanec, M., Taza, F., Kalra, M., Hahn, N., Nephew, K. P., Spinella, M. J. & Albany, C., Feb 1 2018, In : Targeted Oncology. 13, 1, p. 49-60 12 p.

Research output: Contribution to journalReview article

Methyltransferases
DNA
Neoplasms
Tumor Suppressor Genes
Therapeutics

Labeling for Quantitative Comparison of Imaging Measurements in Vitro and in Cells

Davis, C. M. & Gruebele, M., Apr 3 2018, In : Biochemistry. 57, 13, p. 1929-1938 10 p.

Research output: Contribution to journalReview article

Cytology
Labeling
RNA
Protein folding
Imaging techniques

Microscopic view of lipids and their diverse biological functions

Wen, P. C., Mahinthichaichan, P., Trebesch, N., Jiang, T., Zhao, Z., Shinn, E., Wang, Y., Shekhar, M., Kapoor, K., Chan, C. K. & Tajkhorshid, E., Aug 2018, In : Current Opinion in Structural Biology. 51, p. 177-186 10 p.

Research output: Contribution to journalReview article

Lipids
Membranes
Physiological Phenomena
Lipid Bilayers
Hydrodynamics

Multichannel spectrometers in animals

Cronin, T. W., Garcia, M. & Gruev, V., Mar 2018, In : Bioinspiration and Biomimetics. 13, 2, 021001.

Research output: Contribution to journalReview article

Imaging systems
Spectrometers
Animals
Biomimetics
Invertebrates

National outcomes of in-hospital cardiopulmonary resuscitation in patients with acute kidney injury: Years 2005 - 2011

Saeed, F., Adil, M. M., Kaleem, U. M., Khan, A. S., Holley, J. L. & Damirjian, S., Nov 1 2018, In : Clinical Nephrology. 90, 5, p. 325-333 9 p.

Research output: Contribution to journalReview article

Cardiopulmonary Resuscitation
Acute Kidney Injury
Length of Stay
Hospital Mortality
Nursing Homes

Nutrigenetic contributions to dyslipidemia: A focus on physiologically relevant pathways of lipid and lipoprotein metabolism

Hannon, B. A., Khan, N. A. & Teran-Garcia, M., Oct 2 2018, In : Nutrients. 10, 10, 1404.

Research output: Contribution to journalReview article

Nutrigenomics
nutrigenomics
hyperlipidemia
Dyslipidemias
Lipid Metabolism

Of Mice, Dogs, Pigs, and Men: Choosing the Appropriate Model for Immuno-Oncology Research

Overgaard, N. H., Fan, T. M., Schachtschneider, K. M., Principe, D. R., Schook, L. B. & Jungersen, G., Dec 31 2018, In : ILAR Journal. 59, 3, p. 247-262 16 p.

Research output: Contribution to journalReview article

Oncology
Tumors
Swine
Dogs
swine

Point-of-care sensors for the management of sepsis

Reddy, B., Hassan, U., Seymour, C., Angus, D. C., Isbell, T. S., White, K., Weir, W., Yeh, L., Vincent, A. & Bashir, R., Sep 1 2018, In : Nature biomedical engineering. 2, 9, p. 640-648 9 p.

Research output: Contribution to journalReview article

Point-of-Care Systems
Sepsis
Health
Sensors
Infection

Potential lymphangiogenesis therapies: Learning from current antiangiogenesis therapies—A review

Yamakawa, M., Doh, S. J., Santosa, S. M., Montana, M., Qin, E. C., Kong, H., Han, K. Y., Yu, C., Rosenblatt, M. I., Kazlauskas, A., Chang, J. H. & Azar, D. T., Nov 2018, In : Medicinal Research Reviews. 38, 6, p. 1769-1798 30 p.

Research output: Contribution to journalReview article

Lymphangiogenesis
Learning
Pharmaceutical Preparations
Vascular Endothelial Growth Factor C
Nanotechnology

Recent advances in metabolic engineering of Saccharomyces cerevisiae: New tools and their applications

Lian, J., Mishra, S. & Zhao, H., Nov 2018, In : Metabolic Engineering. 50, p. 85-108 24 p.

Research output: Contribution to journalReview article

Metabolic engineering
Metabolic Engineering
Yeast
Saccharomyces cerevisiae
Clustered Regularly Interspaced Short Palindromic Repeats

Recent developments in the application of P450 based biocatalysts

Wei, Y., Ang, E. L. & Zhao, H., Apr 2018, In : Current Opinion in Chemical Biology. 43, p. 1-7 7 p.

Research output: Contribution to journalReview article

Mixed Function Oxygenases
Enzymes
Biosynthesis
Biological Products
Cytochrome P-450 Enzyme System

Reconstitution and substrate specificity for isopentenyl pyrophosphate of the antiviral radical SAM enzyme viperin

Chakravarti, A., Selvadurai, K., Shahoei, R., Lee, H., Fatma, S., Tajkhorshid, E. & Huang, R. H., Jan 1 2018, In : Journal of Biological Chemistry. 293, 36, p. 14122-14133 12 p.

Research output: Contribution to journalReview article

Substrate Specificity
Antiviral Agents
Substrates
Enzymes
Mevalonic Acid

Sensitivity of peripheral membrane proteins to the membrane context: A case study of phosphatidylserine and the TIM proteins

Kerr, D., Tietjen, G. T., Gong, Z., Tajkhorshid, E., Adams, E. J. & Lee, K. Y. C., Oct 2018, In : Biochimica et Biophysica Acta - Biomembranes. 1860, 10, p. 2126-2133 8 p.

Research output: Contribution to journalReview article

T-cells
Phosphatidylserines
Mucins
Immunoglobulins
Membrane Proteins

Single Cell Neurometabolomics

Qi, M., Philip, M. C., Yang, N. & Sweedler, J. V., Jan 17 2018, In : ACS Chemical Neuroscience. 9, 1, p. 40-50 11 p.

Research output: Contribution to journalReview article

Metabolomics
Brain
Molecules
Biological systems
Nutrition
Food and Beverages
Pediatric Obesity
state law
childhood
food

Technological advances in integrating multi-kilobase DNA sequences into genomes

Gurumurthy, C. B. & Perez-Pinera, P., Sep 2018, In : Current Opinion in Biomedical Engineering. 7, p. 16-23 8 p.

Research output: Contribution to journalReview article

DNA sequences
DNA
Genes
Genome
Homologous Recombination

The Gastrointestinal Microbiome: A Review

Barko, P. C., McMichael, M. A., Swanson, K. S. & Williams, D. A., Jan 1 2018, In : Journal of veterinary internal medicine. 32, 1, p. 9-25 17 p.

Research output: Contribution to journalReview article

digestive system
Mammals
Health
Microbial Genome
mammals

The gut microbiome of nonhuman primates: Lessons in ecology and evolution

Clayton, J. B., Gomez, A., Amato, K., Knights, D., Travis, D. A., Blekhman, R., Knight, R., Leigh, S., Stumpf, R., Wolf, T., Glander, K. E., Cabana, F. & Johnson, T. J., Jun 2018, In : American journal of primatology. 80, 6, e22867.

Research output: Contribution to journalReview article

primate
Primates
digestive system
ecology
human health

The Molecular Industrial Revolution: Automated Synthesis of Small Molecules

Trobe, M. & Burke, M. D., Apr 9 2018, In : Angewandte Chemie - International Edition. 57, 16, p. 4192-4214 23 p.

Research output: Contribution to journalReview article

3D printers
Automation
Molecules
Innovation
Direction compound

Towards the generalized iterative synthesis of small molecules

Lehmann, J. W., Blair, D. J. & Burke, M. D., Jan 1 2018, In : Nature Reviews Chemistry. 2, 2, 0115.

Research output: Contribution to journalReview article

Molecules
Tall buildings
Biological Products
Macromolecules
Drug products
2019

A small-molecule competitive inhibitor of phosphatidic acid binding by the AAA+ protein NSF/Sec18 blocks the SNARE-priming stage of vacuole fusion

Sparks, R. P., Arango, A. S., Starr, M. L., Aboff, Z. L., Hurst, L. R., Rivera-Kohr, D. A., Zhang, C., Harnden, K. A., Jenkins, J. L., Guida, W. C., Tajkhorshid, E. & Fratti, R. A., Jan 1 2019, In : Journal of Biological Chemistry. 294, 46, p. 17168-17185 18 p.

Research output: Contribution to journalReview article

Open Access
N-Ethylmaleimide-Sensitive Proteins
SNARE Proteins
Phosphatidic Acids
Vacuoles
Carrier Proteins

BDNF, endurance activity, and mechanisms underlying the evolution of hominin brains

Hill, T. & Polk, J. D., Jan 2019, In : American journal of physical anthropology. 168, p. 47-62 16 p.

Research output: Contribution to journalReview article

endurance
Brain-Derived Neurotrophic Factor
Hominidae
brain
Brain

Biosystems design by directed evolution

Wang, Y., Yu, X. & Zhao, H., Jan 1 2019, (Accepted/In press) In : AIChE Journal. 66, 3, e16716.

Research output: Contribution to journalReview article

Genome
Protein Engineering
Screening
Genetic Testing
Biotransformation

Characterization of Lipid-Protein Interactions and Lipid-Mediated Modulation of Membrane Protein Function through Molecular Simulation

Muller, M. P., Jiang, T., Sun, C., Lihan, M., Pant, S., Mahinthichaichan, P., Trifan, A. & Tajkhorshid, E., May 8 2019, In : Chemical reviews. 119, 9, p. 6086-6161 76 p.

Research output: Contribution to journalReview article

Membrane Proteins
Modulation
Lipids
Proteins
Molecular dynamics

Computational Dissection of Membrane Transport at a Microscopic Level

Jiang, T., Wen, P. C., Trebesch, N., Zhao, Z., Pant, S., Kapoor, K., Shekhar, M. & Tajkhorshid, E., Jan 1 2019, (Accepted/In press) In : Trends in Biochemical Sciences.

Research output: Contribution to journalReview article

Dissection
Membrane Transport Proteins
Membranes
Molecular Dynamics Simulation
Computational methods

Congress of neurological surgeons systematic review and evidence-based guidelines on the evaluation and treatment of patients with thoracolumbar spine trauma: Radiological evaluation

Qureshi, S., Dhall, S. S., Anderson, P. A., Arnold, P. M., Chi, J. H., Dailey, A. T., Eichholz, K. M., Harrop, J. S., Hoh, D. J., Rabb, C. H., Raksin, P. B., Kaiser, M. G. & O'Toole, J. E., Jan 1 2019, In : Clinical Neurosurgery. 84, 1, p. E28-E31

Research output: Contribution to journalReview article

Open Access
Spine
Guidelines
Wounds and Injuries
Magnetic Resonance Imaging
Thorax

Congress of neurological surgeons systematic review and evidence-based guidelines on the evaluation and treatment of patients with thoracolumbar spine trauma: Timing of surgical intervention

Eichholz, K. M., Rabb, C. H., Anderson, P. A., Arnold, P. M., Chi, J. H., Dailey, A. T., Dhall, S. S., Harrop, J. S., Hoh, D. J., Qureshi, S., Raksin, P. B., Kaiser, M. G. & O'Toole, J. E., Jan 1 2019, In : Clinical Neurosurgery. 84, 1, p. E53-E55

Research output: Contribution to journalReview article

Open Access
Spine
Thorax
Guidelines
Wounds and Injuries
Length of Stay

Congress of neurological surgeons systematic review and evidence-based guidelines on the evaluation and treatment of patients with thoracolumbar spine trauma: Hemodynamic management

Dhall, S. S., Dailey, A. T., Anderson, P. A., Arnold, P. M., Chi, J. H., Eichholz, K. M., Harrop, J. S., Hoh, D. J., Qureshi, S., Rabb, C. H., Raksin, P. B., Kaiser, M. G. & O'Toole, J. E., Jan 1 2019, In : Clinical Neurosurgery. 84, 1, p. E43-E45

Research output: Contribution to journalReview article

Open Access
Arterial Pressure
Spine
Hemodynamics
Guidelines
Wounds and Injuries

Congress of neurological surgeons systematic review and evidence-based guidelines on the evaluation and treatment of patients with thoracolumbar spine trauma: Operative versus nonoperative treatment

Rabb, C. H., Hoh, D. J., Anderson, P. A., Arnold, P. M., Chi, J. H., Dailey, A. T., Dhall, S. S., Eichholz, K. M., Harrop, J. S., Qureshi, S., Raksin, P. B., Kaiser, M. G. & O'Toole, J. E., Jan 1 2019, In : Clinical Neurosurgery. 84, 1, p. E50-E52

Research output: Contribution to journalReview article

Open Access
Spine
Thorax
Guidelines
Wounds and Injuries
Therapeutics

Congress of neurological surgeons systematic review and evidence-based guidelines on the evaluation and treatment of patients with thoracolumbar spine trauma: Nonoperative care

Hoh, D. J., Qureshi, S., Anderson, P. A., Arnold, P. M., John, H. C., Dailey, A. T., Dhall, S. S., Eichholz, K. M., Harrop, J. S., Rabb, C. H., Raksin, P. B., Kaiser, M. G. & O'Toole, J. E., Jan 1 2019, In : Clinical Neurosurgery. 84, 1, p. E46-E49

Research output: Contribution to journalReview article

Open Access
Braces
Spine
Guidelines
Wounds and Injuries
Thorax

Congress of neurological surgeons systematic review and evidence-based guidelines on the evaluation and treatment of patients with thoracolumbar spine trauma: Pharmacological treatment

Arnold, P. M., Anderson, P. A., Chi, J. H., Dailey, A. T., Dhall, S. S., Eichholz, K. M., Harrop, J. S., Hoh, D. J., Qureshi, S., Rabb, C. H., Raksin, P. B., Kaiser, M. G. & O'Toole, J. E., Jan 1 2019, In : Clinical Neurosurgery. 84, 1, p. E36-E38

Research output: Contribution to journalReview article

Open Access
Methylprednisolone
Spine
Pharmacology
Guidelines
Wounds and Injuries

Congress of neurological surgeons systematic review and evidence-based guidelines on the evaluation and treatment of patients with thoracolumbar spine trauma: Neurological assessment

Harrop, J. S., Chi, J. H., Anderson, P. A., Arnold, P. M., Dailey, A. T., Dhall, S. S., Eichholz, K. M., Hoh, D. J., Qureshi, S., Rabb, C. H., Raksin, P. B., Kaiser, M. G. & O'Toole, J. E., Jan 1 2019, In : Clinical Neurosurgery. 84, 1, p. E32-E35

Research output: Contribution to journalReview article

Open Access
Spine
Thorax
Guidelines
Wounds and Injuries
Spinal Cord Injuries

Congress of neurological surgeons systematic review and evidence-based guidelines on the evaluation and treatment of patients with thoracolumbar spine trauma: Prophylaxis and treatment of thromboembolic events

Raksin, P. B., Harrop, J. S., Anderson, P. A., Arnold, P. M., Chi, J. H., Dailey, A. T., Dhall, S. S., Eichholz, K. M., Hoh, D. J., Qureshi, S., Rabb, C. H., Kaiser, M. G. & O'Toole, J. E., Jan 1 2019, In : Clinical Neurosurgery. 84, 1, p. E39-E42

Research output: Contribution to journalReview article

Open Access
Venous Thromboembolism
Pulmonary Embolism
Spine
Thorax
Guidelines

Congress of neurological surgeons systematic review and evidence-based guidelines on the evaluation and treatment of patients with thoracolumbar spine trauma: Surgical approaches

Anderson, P. A., Raksin, P. B., Arnold, P. M., Chi, J. H., Dailey, A. T., Dhall, S. S., Eichholz, K. M., Harrop, J. S., Hoh, D. J., Qureshi, S., Rabb, C. H., Kaiser, M. G. & O'Toole, J. E., Jan 1 2019, In : Clinical Neurosurgery. 84, 1, p. E56-E58

Research output: Contribution to journalReview article

Open Access
Spine
Guidelines
Wounds and Injuries
Physicians
Therapeutics

Congress of neurological surgeons systematic review and evidence-based guidelines on the evaluation and treatment of patients with thoracolumbar spine trauma: Classification of injury

Dailey, A. T., Arnold, P. M., Anderson, P. A., Chi, J. H., Dhall, S. S., Eichholz, K. M., Harrop, J. S., Hoh, D. J., Qureshi, S., Rabb, C. H., Raksin, P. B., Kaiser, M. G. & O'Toole, J. E., Jan 1 2019, In : Clinical Neurosurgery. 84, 1, p. E24-E27

Research output: Contribution to journalReview article

Open Access
Spine
Guidelines
Wounds and Injuries
Therapeutics
Neurosurgeons

Darwinian bee-keeping: lessons from the wild

Robinson, G., Jul 1 2019, In : Nature. 571, 7763, p. 34-35

Research output: Contribution to journalReview article

Effectiveness of Workplace Lactation Interventions on Breastfeeding Outcomes in the United States: An Updated Systematic Review

Kim, J. H., Shin, J. C. & Donovan, S. M., Feb 1 2019, In : Journal of Human Lactation. 35, 1, p. 100-113 14 p.

Research output: Contribution to journalReview article

Breast Feeding
Lactation
Workplace
Breast
Parental Leave

Exercise and the Gut Microbiome: A Review of the Evidence, Potential Mechanisms, and Implications for Human Health

Mailing, L. J., Allen, J. M., Buford, T. W., Fields, C. J. & Woods, J. A., Apr 1 2019, In : Exercise and Sport Sciences Reviews. 47, 2, p. 75-85 11 p.

Research output: Contribution to journalReview article

Health
Gastrointestinal Tract
Exercise
Gastrointestinal Microbiome

Exploring the Fundamental Structures of Life: Non-Targeted, Chemical Analysis of Single Cells and Subcellular Structures

Neumann, E. K., Do, T. D., Comi, T. J. & Sweedler, J. V., Jul 8 2019, In : Angewandte Chemie - International Edition. 58, 28, p. 9348-9364 17 p.

Research output: Contribution to journalReview article

Chemical analysis
Throughput
Imaging techniques
Data storage equipment

Health benefits of yogurt among infants and toddlers aged 4 to 24 months: A systematic review

Donovan, S. M. & Rao, G., Jan 1 2019, In : Nutrition reviews. 77, 7, p. 478-486 9 p.

Research output: Contribution to journalReview article

Yogurt
Insurance Benefits
Cohort Studies
Cultured Milk Products
Information Storage and Retrieval

Inhibitory control of emotional processing: Theoretical and empirical considerations

Bartholomew, M. E., Heller, W. & Miller, G. A., Jan 1 2019, In : International Journal of Psychophysiology.

Research output: Contribution to journalReview article

Emotions
Research
Inhibition (Psychology)

Integration of machine learning and pharmacogenomic biomarkers for predicting response to antidepressant treatment: Can computational intelligence be used to augment clinical assessments?

Athreya, A. P., Iyer, R., Wang, L., Weinshilboum, R. M. & Bobo, W. V., Jan 1 2019, In : Pharmacogenomics. 20, 14, p. 983-988 6 p.

Research output: Contribution to journalReview article

Open Access
Artificial Intelligence
Pharmacogenetics
Antidepressive Agents
Biomarkers
Machine Learning

Investigating brain d-serine: Advocacy for good practices

Mothet, J. P., Billard, J. M., Pollegioni, L., Coyle, J. T. & Sweedler, J. V., May 2019, In : Acta Physiologica. 226, 1, e13257.

Research output: Contribution to journalReview article

Serine
Amino Acids
Brain
Molecular Models
Practice Guidelines

Motor Learning in People with Multiple Sclerosis: A Systematic Review and Meta-analysis

Tablerion, J. M., Wood, T. A., Hsieh, K. L., Bishnoi, A., Sun, R., Hernandez, M., An, R. & Sosnoff, J. J., Jan 1 2019, (Accepted/In press) In : Archives of Physical Medicine and Rehabilitation.

Research output: Contribution to journalReview article

Multiple Sclerosis
Meta-Analysis
Learning
Motor Skills
Information Storage and Retrieval

Multi-cellular engineered living systems: Building a community around responsible research on emergence

Sample, M., Boulicault, M., Allen, C., Bashir, R., Hyun, I., Levis, M., Lowenthal, C., Mertz, D., Montserrat, N., Palmer, M. J., Saha, K. & Zartman, J., Jul 10 2019, In : Biofabrication. 11, 4, 043001.

Research output: Contribution to journalReview article

Open Access
Research
Seizing
Organoids
Technology
Civil Rights

Pasteurella multocida: Genotypes and genomics

Peng, Z., Wang, X., Zhou, R., Chen, H., Wilson, B. A. & Wu, B., Jan 1 2019, In : Microbiology and Molecular Biology Reviews. 83, 4, e00014-19.

Research output: Contribution to journalReview article

Pasteurella multocida
Genomics
Genotype
Genome
Virulence

Polarisation signals: A new currency for communication

Marshall, N. J., Powell, S. B., Cronin, T. W., Caldwell, R. L., Johnsen, S., Gruev, V., Chiou, T. H. S., Roberts, N. W. & How, M. J., Feb 2019, In : Journal of Experimental Biology. 222, 3, jeb134213.

Research output: Contribution to journalReview article

polarized light
currency
animal communication
polarization
Communication

Preface

Donovan, S. M., German, J. B., Lönnerdal, B. & Lucas, A., Jan 1 2019, In : Nestle Nutrition Institute Workshop Series. 90, p. VII-IX

Research output: Contribution to journalReview article

Open Access

Procaspase-3 Overexpression in Cancer: A Paradoxical Observation with Therapeutic Potential

Boudreau, M. W., Peh, J. & Hergenrother, P. J., Nov 15 2019, In : ACS chemical biology. 14, 11, p. 2335-2348 14 p.

Research output: Contribution to journalReview article

Caspase 3
Observation
Neoplasms
Therapeutics
Apoptosis Regulatory Proteins

Provocative questions in osteosarcoma basic and translational biology: A report from the Children's Oncology Group

Roberts, R. D., Lizardo, M. M., Reed, D. R., Hingorani, P., Glover, J., Allen-Rhoades, W., Fan, T., Khanna, C., Sweet-Cordero, E. A., Cash, T., Bishop, M. W., Hegde, M., Sertil, A. R., Koelsche, C., Mirabello, L., Malkin, D., Sorensen, P. H., Meltzer, P. S., Janeway, K. A., Gorlick, R. & 1 others, Crompton, B. D., Oct 15 2019, In : Cancer. 125, 20, p. 3514-3525 12 p.

Research output: Contribution to journalReview article

Osteosarcoma
Poisons
Research
Epigenomics
Lung Diseases