Research Output 1977 2020

Filter
Comment/debate
2019

Author Correction: Targeted exon skipping with AAV-mediated split adenine base editors (Cell Discovery, (2019), 5, 1, (41), 10.1038/s41421-019-0109-7)

Winter, J., Luu, A., Gapinske, M., Manandhar, S., Shirguppe, S., Woods, W. S., Song, J. S. & Perez-Pinera, P., Dec 1 2019, In : Cell Discovery. 5, 1, 56.

Research output: Contribution to journalComment/debate

Open Access
Adenine
Exons
Labeling
Publications

Author Correction: Building a global alliance of biofoundries (Nature Communications, (2019), 10, 1, (2040), 10.1038/s41467-019-10079-2)

Hillson, N., Caddick, M., Cai, Y., Carrasco, J. A., Chang, M. W., Curach, N. C., Bell, D. J., Feuvre, R. L., Friedman, D. C., Fu, X., Gold, N. D., Herrgård, M. J., Holowko, M. B., Johnson, J. R., Johnson, R. A., Keasling, J. D., Kitney, R. I., Kondo, A., Liu, C., Martin, V. J. J. & 16 others, Menolascina, F., Ogino, C., Patron, N. J., Pavan, M., Poh, C. L., Pretorius, I. S., Rosser, S. J., Scrutton, N. S., Storch, M., Tekotte, H., Travnik, E., Vickers, C. E., Yew, W. S., Yuan, Y., Zhao, H. & Freemont, P. S., Dec 1 2019, In : Nature communications. 10, 1, 3132.

Research output: Contribution to journalComment/debate

Open Access
foundries
Queensland
Foundries
communication
Genome

Building a global alliance of biofoundries

Hillson, N., Caddick, M., Cai, Y., Carrasco, J. A., Chang, M. W., Curach, N. C., Bell, D. J., Le Feuvre, R., Friedman, D. C., Fu, X., Gold, N. D., Herrgård, M. J., Holowko, M. B., Johnson, J. R., Johnson, R. A., Keasling, J. D., Kitney, R. I., Kondo, A., Liu, C., Martin, V. J. J. & 16 others, Menolascina, F., Ogino, C., Patron, N. J., Pavan, M., Poh, C. L., Pretorius, I. S., Rosser, S. J., Scrutton, N. S., Storch, M., Tekotte, H., Travnik, E., Vickers, C. E., Yew, W. S., Yuan, Y., Zhao, H. & Freemont, P. S., Dec 1 2019, In : Nature communications. 10, 1, 2040.

Research output: Contribution to journalComment/debate

Open Access
biotechnology
Biotechnology
organisms
Testing
Research

Correction to: Allosteric interactions in human cytochrome P450 CYP3A4: The role of phenylalanine 213 (Biochemistry (2019) 58: 10 (1411-1422) DOI: 10.1021/acs.biochem.8b01268)

Denisov, I. G., Grinkova, Y. V., Nandigrami, P., Shekhar, M., Tajkhorshid, E. & Sligar, S. G., Jun 18 2019, In : Biochemistry. 58, 24, 1 p.

Research output: Contribution to journalComment/debate

Cytochrome P-450 CYP3A
Biochemistry
Phenylalanine
Cytochrome P-450 Enzyme System

Summary on Clinical Aspects of Human Milk on Infant Health Outcomes

Donovan, S. M., Jan 1 2019, In : Nestle Nutrition Institute Workshop Series. 90, p. 175-178 4 p.

Research output: Contribution to journalComment/debate

Human Milk
breast milk
Infant Health
2018

90th Anniversary Commentary: Prebiotics in Infancy for Allergy Prevention: Promising Findings, but No Consensus

Donovan, S. M., Oct 1 2018, In : Journal of Nutrition. 148, 10, p. 1691-1692 2 p.

Research output: Contribution to journalComment/debate

Prebiotics
Anniversaries and Special Events
Hypersensitivity

Correction: Cytosolic delivery of multidomain cargos by the N Terminus of pasteurella multocida toxin (2018) 86:8 (e00248-18) DOI: 10.1128/IAI.00248-18)

Clemons, N. C., Bannai, Y., Haywood, E. E., Xu, Y., Buschbach, J. D., Ho, M. & Wilson, B. A., Oct 1 2018, In : Infection and immunity. 86, 10, e00596-18.

Research output: Contribution to journalComment/debate

Pasteurella multocida toxin

Correction to: Simulation and Fabrication of Stronger, Larger, and Faster Walking Biohybrid Machines (Advanced Functional Materials, (2018), 28, 23, (1801145), 10.1002/adfm.201801145)

Pagan-Diaz, G. J., Zhang, X., Grant, L., Kim, Y., Aydin, O., Cvetkovic, C., Ko, E., Solomon, E., Hollis, J., Kong, H., Saif, T., Gazzola, M. & Bashir, R., Aug 15 2018, In : Advanced Functional Materials. 28, 33, 1804580.

Research output: Contribution to journalComment/debate

walking machines
Functional materials
lists
Fabrication
fabrication

Going on offense against the gram-negative defense

Drown, B. S. & Hergenrother, P., Jun 26 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 26, p. 6530-6532 3 p.

Research output: Contribution to journalComment/debate

Investigating belief falsehood. Fear appeals do change behaviour in experimental laboratory studies. A commentary on Kok et al. (2018)

White, B. X. & Albarracin, D., Apr 3 2018, In : Health Psychology Review. 12, 2, p. 147-150 4 p.

Research output: Contribution to journalComment/debate

Fear
2017
Peer Review
Microfluidics
Embryonic Structures
corrigendum
In Vitro Techniques

Erratum to: Screening wild and semi-free ranging great apes for putative sexually transmitted diseases: Evidence of Trichomonadidae infections ((2015), 10.1002/ajp.22442)

Rushmore, J., Allison, A. B., Edwards, E. E., Bagal, U., Altizer, S., Cranfield, M. R., Glenn, T. C., Liu, H., Mudakikwa, A., Mugisha, L., Muller, M. N., Stumpf, R. M., Thompson, M. E., Wrangham, R. & Yabsley, M. J., Apr 1 2017, In : American journal of primatology. 79, 4, p. 1-2 2 p.

Research output: Contribution to journalComment/debate

sexually transmitted disease
sexually transmitted diseases
Pongidae
urine
screening

Human milk oligosaccharides: Potent weapons in the battle against rotavirus infection

Donovan, S. M., Sep 1 2017, In : Journal of Nutrition. 147, 9, p. 1605-1606 2 p.

Research output: Contribution to journalComment/debate

Rotavirus Infections
Weapons
Human Milk
Oligosaccharides

Reaction: Broad-Spectrum Antibiotics, a Call for Chemists

Richter, M. F. & Hergenrother, P., Jul 13 2017, In : Chem. 3, 1, p. 10-13 4 p.

Research output: Contribution to journalComment/debate

Antibiotics
antibiotics
Anti-Bacterial Agents
Biochemistry
biochemistry

The natural productome

Palazzolo, A. M. E., Simons, C. L. W. & Burke, M. D., May 30 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 22, p. 5564-5566 3 p.

Research output: Contribution to journalComment/debate

2016

Anisotropic nanoparticles: General discussion

Castelli, A., Striolo, A., Roig, A., Murphy, C., Reguera, J., Liz-Marzán, L., Mueller, A., Critchley, K., Zhou, Y., Brust, M., Thill, A., Scarabelli, L., Tadiello, L., König, T. A. F., Reiser, B., López-Quintela, M. A., Buzza, M., Deák, A., Kuttner, C., Gonzalez Solveyra, E. & 15 others, Pasquato, L., Portehault, D., Mattoussi, H., Kotov, N. A., Kumacheva, E., Heatley, K., Bergueiro, J., González, G., Tong, W., Tahir, M. N., Abécassis, B., Rojas-Carrillo, O., Xia, Y., Mayer, M. & Peddis, D., Jan 1 2016, In : Faraday Discussions. 191, p. 229-254 26 p.

Research output: Contribution to journalComment/debate

Applications: General discussion

Striolo, A., Sicard, F., Liz-Marzán, L., Murphy, C., Roig, A., Mueller, A., Reguera, J., Zhou, Y., Brust, M., Scarabelli, L., Tadiello, L., Thill, A., Yarovsky, I., Mayer, M., López-Quintela, M. A., Kuttner, C., Gonzalez Solveyra, E., Wolf, H., Kay, E., Pasquato, L. & 13 others, Buceta, D., Portehault, D., Mattoussi, H., González, G., Faller, R., French, D., Abécassis, B., Stevens, M., Xia, Y., Jones, R., Grzelczak, M., Penna, M. & Drummond, C., Jan 1 2016, In : Faraday Discussions. 191, p. 565-595 31 p.

Research output: Contribution to journalComment/debate

Base-Metal Catalysis: Embrace the Wild Side

White, M. C., Jul 28 2016, In : Advanced Synthesis and Catalysis. 358, 15, p. 2364-2365 2 p.

Research output: Contribution to journalComment/debate

Catalysis
Metals

Commentaries

Arnold, P., Jul 1 2016, In : Surgical Neurology International. 7, p. S59

Research output: Contribution to journalComment/debate

Open Access

Corrigendum: Contractile dynamics change before morphological cues during fluorescence illumination

Knoll, S. G., Ahmed, W. W. & Saif, T. A., Feb 18 2016, In : Scientific reports. 6, 21218.

Research output: Contribution to journalComment/debate

Deeper understanding of carboxylase

Morrissey, J. H., Apr 14 2016, In : Blood. 127, 15, p. 1841-1842 2 p.

Research output: Contribution to journalComment/debate

Glutamic Acid
Assays
Blood
Genes
Mutation

Erratum: Point-of-service, quantitative analysis of ascorbic acid in aqueous humor for evaluating anterior globe integrity (Scientific Reports (2016) 5:16011 DOI: 10.1038/srep16011)

Gartia, M. R., Misra, S. K., Ye, M., Schwartz-Duval, A., Plucinski, L., Zhou, X., Kellner, D., Labriola, L. T. & Pan, D., Feb 12 2016, In : Scientific Reports. 6, 20452.

Research output: Contribution to journalComment/debate

Erratum: DICER1 and microRNA regulation in post-traumatic stress disorder with comorbid depression (Nature Communications (2015) 6 (10106) DOI: 10.1038/ncomms10106)

Wingo, A. P., Almli, L. M., Stevens, J. S., Klengel, T., Uddin, M., Li, Y., Bustamante, A. C., Lori, A., Koen, N., Stein, D. J., Smith, A. K., Aiello, A. E., Koenen, K. C., Wildman, D. E., Galea, S., Bradley, B., Binder, E. B., Jin, P., Gibson, G. & Ressler, K. J., Mar 3 2016, In : Nature communications. 7, 10958.

Research output: Contribution to journalComment/debate

Erratum: Hydrogen peroxide-mediated cytosolic acidification is a signal for mitochondrial translocation of bax during drug-induced apoptosis of tumor cells (Cancer Res (2004) 64 (7867-7878))

Ahmad, K. A., Iskandar, K. B., Hirpara, J. L., Clement, M. V. & Pervaiz, S., Mar 15 2016, In : Cancer Research. 76, 6, p. 1664-1667 4 p.

Research output: Contribution to journalComment/debate

Hydrogen Peroxide
Apoptosis
Pharmaceutical Preparations
Neoplasms

Erratum: Temporal variation selects for diet-microbe co-metabolic traits in the gut of Gorilla spp (The ISME Journal (2016) 10, 532; (DOI:10.1038/ismej.2015.252))

Gomez, A., Rothman, J. M., Petrzelkova, K., Yeoman, C. J., Vlckova, K., Umaña, J. D., Carr, M., Modry, D., Todd, A., Torralba, M., Nelson, K. E., Stumpf, R. M., Wilson, B. A., Blekhman, R., White, B. A. & Leigh, S. R., Feb 1 2016, In : ISME Journal. 10, 2, 1 p.

Research output: Contribution to journalComment/debate

Gorilla gorilla
Gorilla
temporal variation
digestive system
diet

Janus and patchy nanoparticles: General discussion

Striolo, A., Kim, J., Liz-Marzán, L., Tadiello, L., Pauly, M., Murphy, C., Roig, A., Gracias, D., Xia, Y., Reguera, J., Mueller, A., Critchley, K., Brust, M., Scarabelli, L., Mayer, M., Thiele, M., Buzza, M., Deák, A., Bago Rodriguez, A. M., Kuttner, C. & 16 others, Wolf, H., Kay, E., Stocco, A., Portehault, D., Mattoussi, H., Heatley, K., Kumacheva, E., González, G., Hanske, C., Tong, W., Tahir, M. N., Abécassis, B., Granick, S., Duguet, E., Synytska, A. & Velikov, K., Jan 1 2016, In : Faraday Discussions. 191, p. 117-139 23 p.

Research output: Contribution to journalComment/debate

Microbiomes, metagenomics, and primate conservation: New strategies, tools, and applications

Stumpf, R. M., Gomez, A., Amato, K. R., Yeoman, C. J., Polk, J. D., Wilson, B. A., Nelson, K. E., White, B. A. & Leigh, S. R., Jul 1 2016, In : Biological Conservation. 199, p. 56-66 11 p.

Research output: Contribution to journalComment/debate

primate
Primates
microbial communities
monitoring
nutrition physiology

Multidimensional targeting for tailoring: a comment on Ogden (2016)

Albarracin, D. & Glasman, L. R., Sep 2016, In : Health Psychology Review. 10, 3, p. 251-255 5 p.

Research output: Contribution to journalComment/debate

Particles at interfaces: General discussion

Striolo, A., Kim, J., Murphy, C., Liz-Marzán, L., Lahann, J., Reguera, J., Zhou, Y., Brust, M., Thill, A., Scarabelli, L., König, T. A. F., Buzza, M., Kuttner, C., Gonzalez Solveyra, E., Wolf, H., Vermant, J., Pauly, M., Harvie, A., Pasquato, L., Stocco, A. & 9 others, Mattoussi, H., Kumacheva, E., Heatley, K., Hanske, C., Faller, R., French, D., Honciuc, A., Binks, B. & Sicard, F., Jan 1 2016, In : Faraday Discussions. 191, p. 407-434 28 p.

Research output: Contribution to journalComment/debate

Pet scans

Fan, T. M., Le Blanc, A. K. & Mason, N., Apr 2016, In : Scientist. 30, 4

Research output: Contribution to journalComment/debate

Transgenic bovine as bioreactors: Challenges and perspectives

Monzani, P. S., Adona, P. R., Ohashi, O. M., Meirelles, F. V. & Wheeler, M. B., Apr 1 2016, In : Bioengineered. 7, 3, p. 123-131 9 p.

Research output: Contribution to journalComment/debate

Recombinant proteins
Bioreactors
Recombinant Proteins
Milk
Proteins
2015

Correction to: Genome-Wide Analyses Reveal a Role for Peptide Hormones in Planarian Germline Development(PLoS Biol, (2015), 13,8)

Collins, J. J., Hou, X., Romanova, E. V., Lambrus, B. G., Miller, C. M., Saberi, A., Sweedler, J. V. & Newmark, P. A., Aug 14 2015, In : PLoS biology. 13, 8, e1002234.

Research output: Contribution to journalComment/debate

Planarians
peptide hormones
Peptide Hormones
germ cells
Genome

Erratum: Computational high-resolution optical imaging of the living human retina (Nature Photonics (2015) 9 (440-443))

Shemonski, N. D., South, F. A., Liu, Y. Z., Adie, S. G., Carney, P. S. & Boppart, S. A., Sep 29 2015, In : Nature Photonics. 9, 10, 1 p.

Research output: Contribution to journalComment/debate

retina
Photonics
photonics
Imaging techniques
high resolution

Erratum: Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax (Nature Communications (2015) 5 (3966) DOI: 10.1038/ncomms4966)

Fang, X., Nevo, E., Han, L., Levanon, E. Y., Zhao, J., Avivi, A., Larkin, D., Jiang, X., Feranchuk, S., Zhu, Y., Fishman, A., Feng, Y., Sher, N., Xiong, Z., Hankeln, T., Huang, Z., Gorbunova, V., Zhang, L., Zhao, W., Wildman, D. E. & 33 others, Xiong, Y., Gudkov, A., Zheng, Q., Rechavi, G., Liu, S., Bazak, L., Chen, J., Knisbacher, B. A., Lu, Y., Shams, I., Gajda, K., Farré, M., Kim, J., Lewin, H. A., Ma, J., Band, M., Bicker, A., Kranz, A., Mattheus, T., Schmidt, H., Seluanov, A., Azpurua, J., McGowen, M. R., Ben Jacob, E., Li, K., Peng, S., Zhu, X., Liao, X., Li, S., Krogh, A., Zhou, X., Brodsky, L. & Wang, J., Aug 12 2015, In : Nature communications. 6, 8051.

Research output: Contribution to journalComment/debate

Rats
Genes
Communication

Erratum to optical coherence tomography for the diagnosis and evaluation of human otitis media [J Korean Med Sci 2015; 30: 328-335]

Cho, N. H., Lee, S. H., Jung, W., Jang, J. H., Boppart, S. A. & Kim, J., Jan 1 2015, In : Journal of Korean Medical Science. 30, 6, 1 p.

Research output: Contribution to journalComment/debate

Optical Coherence Tomography
Otitis Media
Middle Ear
Reproducibility of Results
Sensitivity and Specificity

Navigating life

Cohen, N. J., Jun 1 2015, In : Hippocampus. 25, 6, p. 704-708 5 p.

Research output: Contribution to journalComment/debate

Hippocampus
Entorhinal Cortex
Rodentia
Spatial Navigation
Brain
2014

Black and white with some shades of grey: The diverse responses of inducible metabolic pathways in Escherichia coli

Rao, C. V. & Koirala, S., Sep 1 2014, In : Molecular Microbiology. 93, 6, p. 1079-1083 5 p.

Research output: Contribution to journalComment/debate

Lactose
Metabolic Networks and Pathways
Lac Operon
Escherichia coli
Theoretical Models

Martha Rosenberg: Born with a junk food deficiency: how flacks, quacks, and hacks pimp the public health

Reisner, A. E., Mar 1 2014, In : Agriculture and Human Values. 31, 1, p. 165-166 2 p.

Research output: Contribution to journalComment/debate

public health
2013

Biochemistry: Positive and radical

Peck, S. C. & van der Donk, W. A., Apr 4 2013, In : Nature. 496, 7443, p. 34-35 2 p.

Research output: Contribution to journalComment/debate

Biocatalysis
Fosfomycin
Organophosphonates
Biochemistry
Oxidoreductases

Childhood obesity prevention from cell to society

Fiese, B. H., Bost, K. K., McBride, B. A. & Donovan, S. M., Aug 1 2013, In : Trends in Endocrinology and Metabolism. 24, 8, p. 375-377 3 p.

Research output: Contribution to journalComment/debate

Pediatric Obesity
Family Planning Policy
Family Health
Public Policy
Child Development

Erratum: Ultrafast thermal analysis of surface functionalized gold nanorods in aqueous solution (ACS Nano (2013) 7 (589-597) DOI: 10.1021/nn304738u)

Huang, J., Park, J., Wang, W., Murphy, C. J. & Cahill, D. G., Apr 23 2013, In : ACS Nano. 7, 4, 1 p.

Research output: Contribution to journalComment/debate

Nanorods
Gold
Thermoanalysis
nanorods
thermal analysis

Erratum: Compressed-sensing MRI with random encoding (IEEE Transactions on Medical Imaging)

Haldar, J. P., Hernando, D. & Liang, Z-P., Jul 22 2013, In : IEEE Transactions on Medical Imaging. 32, 7, 1 p., 6548022.

Research output: Contribution to journalComment/debate

Compressed sensing
Medical imaging
Diagnostic Imaging
Magnetic resonance imaging

Just Ask the Expert: Are intact dogs less likely to get cancer?

Fan, T. M., Jun 1 2013, In : Veterinary Medicine. 108, 6

Research output: Contribution to journalComment/debate

Dogs
neoplasms
dogs
Neoplasms

On opposing effects of emotion on contextual or relational memory

Chiu, Y. C., Dolcos, F., Gonsalves, B. D. & Cohen, N. J., Jan 1 2013, In : Frontiers in Psychology. 4, MAR, 103.

Research output: Contribution to journalComment/debate

Emotions
2012

An enhanced protein crosslink identification strategy using CID-cleavable chemical crosslinkers and LC/MS n analysis

Liu, F., Wu, C., Sweedler, J. V. & Goshe, M. B., Feb 1 2012, In : Proteomics. 12, 3, p. 401-405 5 p.

Research output: Contribution to journalComment/debate

Peptides
aspartyl-proline
Proteins
Cross-Linking Reagents
Optical resolving power

Answers to the Carbon-Phosphorus Lyase Conundrum

Zhang, Q. & Van der Donk, W. A., Mar 1 2012, In : ChemBioChem. 13, 5, p. 627-629 3 p.

Research output: Contribution to journalComment/debate

Phosphorous Acids
Biocatalysis
Organophosphonates
Lyases
Molecular Structure

Converging on a mechanism for choline degradation

Thibodeaux, C. J. & van der Donk, W. A., Dec 26 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 52, p. 21184-21185 2 p.

Research output: Contribution to journalComment/debate

Methylamines
Desulfovibrio desulfuricans
Lyases
Choline
Glycine

Erratum: Multistep kinetics of the U1A-SL2 RNA complex dissociation (Journal of Molecular Biology (2011) 408 (896-908))

Anunciado, D., Guzman, I., Dhar, A., Gruebele, M. & Baranger, A. M., Sep 7 2012, In : Journal of Molecular Biology. 422, 1, p. 159-160 2 p.

Research output: Contribution to journalComment/debate

Molecular Biology
RNA

Erratum: Context-dependent effects of asparagine glycosylation on pin WW folding kinetics and thermodynamics (Journal of the American Chemical Society (2010) 132, (15359-15367) DOI: 10.1021/ja106896t)

Price, J. L., Shental-Bechor, D., Dhar, A., Turner, M. J., Powers, E. T., Gruebele, M., Levy, Y. & Kelly, J. W., Mar 7 2012, In : Journal of the American Chemical Society. 134, 9, p. 4450-4451 2 p.

Research output: Contribution to journalComment/debate

Glycosylation
Asparagine
Thermodynamics
Kinetics