Carle Illinois College of Medicine

Research Output 1975 2020

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2019

13C-lutein is differentially distributed in tissues of an adult female rhesus macaque following a single oral administration: a pilot study

Jeon, S., Li, Q., Rubakhin, S., Sweedler, J. V., Smith, J. W., Neuringer, M., Kuchan, M. & Erdman, J. W., Jan 1 2019, In : Nutrition Research. 61, p. 102-108 7 p.

Research output: Contribution to journalArticle

Lutein
Macaca mulatta
Oral Administration
Tissue Distribution
Haplorhini
Health Status
Obesity
Hispanic Americans
Exercise
Needs Assessment

A comparison of glenohumeral joint kinematics and muscle activation during standard and geared manual wheelchair mobility

Slavens, B. A., Jahanian, O., Schnorenberg, A. J. & Hsiao-Wecksler, E. T., Aug 1 2019, In : Medical Engineering and Physics. 70, p. 1-8 8 p.

Research output: Contribution to journalArticle

Shoulder Joint
Wheelchairs
Biomechanical Phenomena
Muscle
Kinematics

A connected cytoskeleton network generates axonal tension in embryonic: Drosophila

Fan, A., Joy, M. S. H. & Saif, M. T. A., Jan 1 2019, In : Lab on a chip. 19, 18, p. 3133-3139 7 p.

Research output: Contribution to journalArticle

Cytoskeleton
Drosophila
Axons
Neurons
Stiffness
Ministry of State Security (GDR)
experiment
Running
Walking
Vaccines

Activation of silent biosynthetic gene clusters using transcription factor decoys

Wang, B., Guo, F., Dong, S. H. & Zhao, H., Feb 1 2019, In : Nature chemical biology. 15, 2, p. 111-114 4 p.

Research output: Contribution to journalArticle

Multigene Family
Transcription Factors
Oxazoles
Peptide Synthases
Polyketide Synthases

Acute aerobic exercise effects on cognitive function in breast cancer survivors: A randomized crossover trial

Salerno, E. A., Rowland, K. M., Kramer, A. F. & McAuley, E., Apr 23 2019, In : BMC Cancer. 19, 1, 371.

Research output: Contribution to journalArticle

Open Access
Cross-Over Studies
Cognition
Survivors
Exercise
Breast Neoplasms

Addressing myths about exercise in hemodialysis patients

Wilund, K., Jeong, J. H. & Greenwood, S. A., Jul 1 2019, In : Seminars in Dialysis. 32, 4, p. 297-302 6 p.

Research output: Contribution to journalArticle

Renal Dialysis
Exercise
Dialysis
Resistance Training
Research

A gene cluster for taurine sulfur assimilation in an anaerobic human gut bacterium

Xing, M., Wei, Y., Hua, G., Li, M., Nanjaraj Urs, A. N., Wang, F., Hu, Y., Zhai, W., Liu, Y., Ang, E. L., Zhao, H. & Zhang, Y., Aug 15 2019, In : Biochemical Journal. 476, 15, p. 2271-2279 9 p.

Research output: Contribution to journalArticle

Taurine
Multigene Family
Sulfur
Bacteria
Genes

A hybrid de novo genome assembly of the honeybee, Apis mellifera, with chromosome-length scaffolds

Wallberg, A., Bunikis, I., Pettersson, O. V., Mosbech, M. B., Childers, A. K., Evans, J. D., Mikheyev, A. S., Robertson, H. M., Robinson, G. E. & Webster, M. T., Apr 8 2019, In : BMC genomics. 20, 1, 275.

Research output: Contribution to journalArticle

Open Access
Bees
Chromosomes
Chromosome Mapping
Genome
Genomic Structural Variation

Allosteric Interactions in Human Cytochrome P450 CYP3A4: The Role of Phenylalanine 213

Denisov, I. G., Grinkova, Y. V., Nandigrami, P., Shekhar, M., Tajkhorshid, E. & Sligar, S., Mar 12 2019, In : Biochemistry. 58, 10, p. 1411-1422 12 p.

Research output: Contribution to journalArticle

Cytochrome P-450 CYP3A
Phenylalanine
Cytochrome P-450 Enzyme System
Progesterone
Carbamazepine

A load-transfer function for the side resistance of drilled shafts in soft rock

Asem, P. & Gardoni, P., Jan 1 2019, In : Soils and Foundations.

Research output: Contribution to journalArticle

soft rock
transfer function
shaft
Transfer functions
Rocks
Tomography
Bone
Thickness measurement
MATLAB
Seed

Analysis of Paper-Based Colorimetric Assays with a Smartphone Spectrometer

Woodburn, E. V., Long, K. D. & Cunningham, B. T., Jan 15 2019, In : IEEE Sensors Journal. 19, 2, p. 508-514 7 p., 8494768.

Research output: Contribution to journalArticle

Smartphones
Spectrometers
Assays
strip
Cameras

Androgen Mediation—and Antiandrogens Mitigation—of the Epidermal Growth Factor Receptor (EGFR) Inhibitor–Induced Rash: Results From a Pilot Randomized Trial and Small Translational Case Series

Le-Rademacher, J. G., Rowland, K. M., Atherton, P. J., Dakhil, C., Sun, Z., Tan, A., Schmidt, L., Nguyen, P. L., Radecki Breitkopf, C., Pittelkow, M., Tindall, D., Menon, S. & Jatoi, A., Jun 1 2019, In : American Journal of Hospice and Palliative Medicine. 36, 6, p. 519-525 7 p.

Research output: Contribution to journalArticle

Androgen Antagonists
Exanthema
Epidermal Growth Factor Receptor
Androgens
Spironolactone

A new implementation for online calculation of manipulator Jacobian

Chembrammel, P. & Kesavadas, T., Feb 1 2019, In : PloS one. 14, 2, e0212018.

Research output: Contribution to journalArticle

Open Access
robots
Manipulators
Robots
Differentiation (calculus)
Derivatives
Multiresolution analysis
ground motion
wavelet
earthquakes
Earthquakes

An Exploratory Look at the Role of Childcare Providers as a Support and Resource for Breastfeeding Mothers

Lundquist, A., McBride, B. A., Donovan, S. M. & Kieffer, A., Jun 1 2019, In : Breastfeeding Medicine. 14, 5, p. 313-319 7 p.

Research output: Contribution to journalArticle

Breast Feeding
Mothers
Education
Foster Home Care
Mental Competency

A pathway for isethionate dissimilation in Bacillus krulwichiae

Tong, Y., Wei, Y., Hu, Y., Ang, E. L., Zhao, H. & Zhang, Y., Jan 1 2019, In : Applied and environmental microbiology. 85, 15, e00793-19.

Research output: Contribution to journalArticle

Bacillus (bacteria)
Bacillus
Bacteria
bacterium
bacteria

A speculative feminist approach to design project management

Radzikowska, M., Roberts-Smith, J., Zhou, X. & Ruecker, S., Jan 1 2019, In : Strategic Design Research Journal. 12, 1, p. 94-113 20 p.

Research output: Contribution to journalArticle

Open Access
Project Management
Project management
Human computer interaction
Software Design
Software design

Assessing the Flexibility of the Prochlorosin 2.8 Scaffold for Bioengineering Applications

Hegemann, J. D., Bobeica, S. C., Walker, M. C., Bothwell, I. R. & van der Donk, W. A., May 17 2019, In : ACS synthetic biology. 8, 5, p. 1204-1214 11 p.

Research output: Contribution to journalArticle

Bioengineering
Scaffolds
Peptides
Epitopes
Cyclization
Spinal Injuries
Spinal Cord Compression
Neurologic Manifestations
Quality of Life
Therapeutics

A subtype of oral, laryngeal, esophageal, and lung, squamous cell carcinoma with high levels of TrkB-T1 neurotrophin receptor mRNA

Zhou, Y., Sinha, S., Schwartz, J. L. & Adami, G. R., Jun 20 2019, In : BMC Cancer. 19, 1, 607.

Research output: Contribution to journalArticle

Open Access
Nerve Growth Factor Receptors
Squamous Cell Carcinoma
Lung
Messenger RNA
Neoplasms

A tetrahedral molecular cage with a responsive vertex

Pattillo, C. C. & Moore, J. S., Jan 1 2019, In : Chemical Science. 10, 29, p. 7043-7048 6 p.

Research output: Contribution to journalArticle

Open Access
Imines
Alkynes
Self assembly

A traction force threshold signifies metastatic phenotypic change in multicellular epithelia

Zhang, Y., Shi, X., Zhao, T., Huang, C., Wei, Q., Tang, X., Santy, L. C., Saif, M. T. A. & Zhang, S., Jan 1 2019, In : Soft Matter. 15, 36, p. 7203-7210 8 p.

Research output: Contribution to journalArticle

epithelium
traction
Stiffness
Phase diagrams
thresholds

Automated sensorless single-shot closed-loop adaptive optics microscopy with feedback from computational adaptive optics

Iyer, R. R., Liu, Y. Z. & Boppart, S. A., Apr 29 2019, In : Optics Express. 27, 9, p. 12998-13014 17 p.

Research output: Contribution to journalArticle

adaptive optics
shot
microscopy
deformable mirrors
aberration

Axial shielding of Pd(II) complexes enables perfect stereoretention in Suzuki-Miyaura cross-coupling of Csp 3 boronic acids

Lehmann, J. W., Crouch, I. T., Blair, D. J., Trobe, M., Wang, P., Li, J. & Burke, M., Dec 1 2019, In : Nature communications. 10, 1, 1263.

Research output: Contribution to journalArticle

Open Access
Boronic Acids
cross coupling
Shielding
shielding
acids

Bagging and deep learning in optimal individualized treatment rules

Mi, X., Zou, F. & Zhu, R., Jan 1 2019, In : Biometrics. 75, 2, p. 674-684 11 p.

Research output: Contribution to journalArticle

Bagging
learning
Learning
Decision Rules
neural networks

Baseline correction of ground motions with physics-based correction patterns

Tian, S., Gardoni, P., Li, H. & Yuan, W., Jan 1 2019, In : Geophysical Journal International. 217, 1, p. 668-681 14 p.

Research output: Contribution to journalArticle

ground motion
Global positioning system
physics
Physics
strong motion

Behavioral response to fiber feedingis cohort-dependent and associated with gut microbiota composition in mice

Mailing, L. J., Allen, J. M., Pence, B. D., Rytych, J., Sun, Y., Bhattacharya, T. K., Park, P., Cross, T. W. L., McCusker, R. H., Swanson, K. S., Fahey, G. C., Rhodes, J. S., Kelley, K. W., Johnson, R. W. & Woods, J. A., Feb 1 2019, In : Behavioural Brain Research. 359, p. 731-736 6 p.

Research output: Contribution to journalArticle

Cellulose
Microbiota
Learning
Bilophila
Aptitude

Biochemical and structural investigation of sulfoacetaldehyde reductase from Klebsiella oxytoca

Zhou, Y., Wei, Y., Lin, L., Xu, T., Ang, E. L., Zhao, H., Yuchi, Z. & Zhang, Y., Jan 1 2019, In : Biochemical Journal. 476, 4, p. 733-746 14 p.

Research output: Contribution to journalArticle

Klebsiella oxytoca
Oxidoreductases
Taurine
NADP
Tail

Biochemical and structural investigation of taurine:2-oxoglutarate aminotransferase from Bifidobacterium kashiwanohense

Li, M., Wei, Y., Yin, J., Lin, L., Zhou, Y., Hua, G., Cao, P., Ang, E. L., Zhao, H., Yuchi, Z. & Zhang, Y., Jan 1 2019, In : Biochemical Journal. 476, 11, p. 1605-1619 15 p.

Research output: Contribution to journalArticle

Bifidobacterium
Taurine
Pyridoxal
Transaminases
Pyridoxal Phosphate

Biodegradable Biliverdin Nanoparticles for Efficient Photoacoustic Imaging

Fathi, P., Knox, H. J., Sar, D., Tripathi, I., Ostadhossein, F., Misra, S. K., Esch, M. B., Chan, J. K. F. & Pan, D., Jul 23 2019, In : ACS Nano. 13, 7, p. 7690-7704 15 p.

Research output: Contribution to journalArticle

Biliverdine
Photoacoustic effect
Nanoparticles
Imaging techniques
nanoparticles

Biohybrid valveless pump-bot powered by engineered skeletal muscle

Li, Z., Seo, Y., Aydin, O., Elhebeary, M., Kamm, R. D., Kong, H. J. & Taher Saif, M. A., Jan 29 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 5, p. 1543-1548 6 p.

Research output: Contribution to journalArticle

Hydrogel
Skeletal Muscle
Muscles
Microfluidics
Muscle Contraction

Biosystems design by directed evolution

Wang, Y., Yu, X. & Zhao, H., Jan 1 2019, In : AIChE Journal. e16716.

Research output: Contribution to journalArticle

Genome
Protein Engineering
Screening
Genetic Testing
Biotransformation

Blue light is a universal signal for Escherichia coli chemoreceptors

Perlova, T., Gruebele, M. H. W. & Chemla, Y. R., Jan 1 2019, In : Journal of bacteriology. 201, 11, e0076218.

Research output: Contribution to journalArticle

Escherichia coli
Light
Bacteria
Proton-Motive Force
Tars

Breaking tolerance with engineered class I antigen-presenting molecules

Parks, C. A., Henning, K. R., Pavelko, K. D., Hansen, M. J., Van Keulen, V. P., Reed, B. K., Stone, J. D., Schrum, A. G., Gil, D., Kranz, D. M., Bordner, A. J., Barry, M. A. & Pease, L. R., Feb 19 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 8, p. 3136-3145 10 p.

Research output: Contribution to journalArticle

Histocompatibility Antigens Class I
Peptides
T-Lymphocytes
Autoantigens
Isoantigens

Bulk-state and single-particle imaging are central to understanding carbon dot photo-physics and elucidating the effects of precursor composition and reaction temperature

Fathi, P., Khamo, J. S., Huang, X., Srivastava, I., Esch, M. B., Zhang, K. & Pan, D., Apr 1 2019, In : Carbon. 145, p. 572-585 14 p.

Research output: Contribution to journalArticle

Carbon
Physics
Imaging techniques
Chemical analysis
Temperature

Characterization of Cas proteins for CRISPR-Cas editing in streptomycetes

Yeo, W. L., Heng, E., Tan, L. L., Lim, Y. W., Lim, Y. H., Hoon, S., Zhao, H., Zhang, M. M. & Wong, F. T., Jan 1 2019, In : Biotechnology and bioengineering. 116, 9, p. 2330-2338 9 p.

Research output: Contribution to journalArticle

Clustered Regularly Interspaced Short Palindromic Repeats
CRISPR-Cas Systems
Genes
Streptococcus thermophilus
Francisella tularensis

Characterization of glutamyl-tRNA–dependent dehydratases using nonreactive substrate mimics

Bothwell, I. R., Cogan, D. P., Kim, T., Reinhardt, C. J., van der Donk, W. A. & Nair, S. K., Aug 27 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 35, p. 17245-17250 6 p.

Research output: Contribution to journalArticle

Open Access
Hydro-Lyases
RNA, Transfer, Glu
Peptides
Nisin
Glutamic Acid
Microspheres
Nanoparticles
Imaging techniques
nanoparticles
magnetic resonance

Characterization of the flavin monooxygenase involved in biosynthesis of the antimalarial FR-900098

Nguyen, K., DeSieno, M. A., Bae, B., Johannes, T. W., Cobb, R. E., Zhao, H. & Nair, S. K., Jan 1 2019, In : Organic and Biomolecular Chemistry. 17, 6, p. 1506-1518 13 p.

Research output: Contribution to journalArticle

dimethylaniline monooxygenase (N-oxide forming)
Flavin-Adenine Dinucleotide
biosynthesis
Biosynthesis
Antimalarials

Characterizing Fatty Liver in vivo in Rabbits, Using Quantitative Ultrasound

Nguyen, T. N., Podkowa, A. S., Tam, A. Y., Arnold, E. C., Miller, R. J., Park, T. H., Do, M. N. & Oelze, M. L., Aug 1 2019, In : Ultrasound in Medicine and Biology. 45, 8, p. 2049-2062 14 p.

Research output: Contribution to journalArticle

rabbits
Fatty Liver
liver
Rabbits
fats

Chemoselective methylene oxidation in aromatic molecules

Zhao, J., Nanjo, T., de Lucca, E. C. & White, M. C., Mar 1 2019, In : Nature Chemistry. 11, 3, p. 213-221 9 p.

Research output: Contribution to journalArticle

Oxidation
Molecules
Scaffolds
Catalysts
Ethinyl Estradiol

Chronic Exposure of Mice to Bisphenol-A Alters Uterine Fibroblast Growth Factor Signaling and Leads to Aberrant Epithelial Proliferation

Neff, A. M., Blanco, S. C., Flaws, J. A., Bagchi, I. C. & Bagchi, M. K., Jan 1 2019, In : Endocrinology. 160, 5, p. 1234-1246 13 p.

Research output: Contribution to journalArticle

Open Access
Fibroblast Growth Factors
Uterus
Endometrial Hyperplasia
Neural Crest
Steroids

Cilostamide affects in a concentration and exposure time-dependent manner the viability and the kinetics of in vitro maturation of caprine and bovine oocytes

Correia, H. H. V., Vieira, L. A., Mielgo, C. M., Paes, V. M., Alves, B. G., Silva, J. R. V., Wheeler, M. B., Rodrigues, A. P. R. & Figueiredo, J. R., Feb 1 2019, In : Research in Veterinary Science. 122, p. 22-28 7 p.

Research output: Contribution to journalArticle

Oocytes
exposure duration
oocytes
goats
viability

Circadian rhythm of redox state regulates membrane excitability in hippocampal CA1 neurons

Naseri Kouzehgarani, G., Bothwell, M. Y. & Gillette, M. L., Jan 1 2019, (Accepted/In press) In : European Journal of Neuroscience.

Research output: Contribution to journalArticle

Suprachiasmatic Nucleus
Circadian Rhythm
Oxidation-Reduction
Neurons
Membranes

Cognitive and neural architecture of decision making competence

Román, F. J., Colom, R., Hillman, C. H., Kramer, A. F., Cohen, N. J. & Barbey, A. K., Oct 1 2019, In : NeuroImage. 199, p. 172-183 12 p.

Research output: Contribution to journalArticle

Mental Competency
Decision Making
Intelligence
Individuality
Vocabulary

Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen

AstraZeneca-Sanger Drug Combination DREAM Consortium, Dec 1 2019, In : Nature communications. 10, 1, 2674.

Research output: Contribution to journalArticle

Open Access
Pharmacogenetics
Drug Combinations
drugs
cancer
predictions

Comparative analysis of brain and fat body gene splicing patterns in the honey bee, Apis mellifera

Kannan, K., Shook, M., Li, Y., Robinson, G. E. & Ma, J., Jan 1 2019, In : G3: Genes, Genomes, Genetics. 9, 4, p. 1055-1063 9 p.

Research output: Contribution to journalArticle

Open Access
Fat Body
Honey
Bees
Alternative Splicing
Brain