Research Output

2019

Negligible impact of perinatal tulathromycin metaphylaxis on the developmental dynamics of fecal microbiota and their accompanying antimicrobial resistome in piglets

Zeineldin, M. M., Megahed, A., Blair, B., Burton, B., Aldridge, B. & Lowe, J., Jan 1 2019, In : Frontiers in Microbiology. 10, APR, 726.

Research output: Contribution to journalArticle

Open Access

Neuromuscular actuation of biohybrid motile bots

Aydin, O., Zhang, X., Nuethong, S., Pagan-Diaz, G. J., Bashir, R., Gazzola, M. & Saif, M. T. A., Oct 1 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 40, p. 19841-19847 7 p.

Research output: Contribution to journalArticle

Open Access

Neuropeptidomics of the mammalian brain

Xie, F., Anapindi, K. D. B., Romanova, E. V. & Sweedler, J. V., Jan 1 2019, Neuromethods. Humana Press Inc., p. 161-177 17 p. (Neuromethods; vol. 146).

Research output: Chapter in Book/Report/Conference proceedingChapter

Noise-Induced Hearing Loss in 3 Working Dogs

Schneider, D. C., Foss, K. D., De Risio, L., Hague, D. W., Mitek, A. E. & McMichael, M., Dec 2019, In : Topics in Companion Animal Medicine. 37, 100362.

Research output: Contribution to journalArticle

Nonparametric variable selection and its application to additive models

Feng, Z., Lin, L., Zhu, R. & Zhu, L., Jan 1 2019, In : Annals of the Institute of Statistical Mathematics.

Research output: Contribution to journalArticle

Nonribosomal Peptide Extension by a Peptide Amino-Acyl tRNA Ligase

Zhang, Z. & Van Der Donk, W. A., Jan 1 2019, (Accepted/In press) In : Journal of the American Chemical Society.

Research output: Contribution to journalArticle

Nontranslational function of leucyl-tRNA synthetase regulates myogenic differentiation and skeletal muscle regeneration

Son, K., You, J. S., Yoon, M. S., Dai, C., Kim, J. H., Khanna, N., Banerjee, A., Martinis, S. A., Han, G., Han, J. M., Kim, S. & Chen, J., May 1 2019, In : Journal of Clinical Investigation. 129, 5, p. 2088-2093 6 p.

Research output: Contribution to journalArticle

Open Access

Novel semiconductor quantum devices shaping our century

Bayram, C., Apr 2019, In : IEEE Nanotechnology Magazine. 13, 2, 1 p., 8674658.

Research output: Contribution to journalEditorial

Nucleoid Size Scaling and Intracellular Organization of Translation across Bacteria

Gray, W. T., Govers, S. K., Xiang, Y., Parry, B. R., Campos, M., Kim, S. & Jacobs-Wagner, C., May 30 2019, In : Cell. 177, 6, p. 1632-1648.e20

Research output: Contribution to journalArticle

Observation of Microheterogeneity in Highly Concentrated Nonaqueous Electrolyte Solutions

Robertson, L. A., Li, Z., Cao, Y., Shkrob, I. A., Tyagi, M., Smith, K. C., Zhang, L., Moore, J. S. & Z, Y., Jan 1 2019, In : Journal of the American Chemical Society.

Research output: Contribution to journalArticle

Off-policy evaluation and learning from logged bandit feedback: Error reduction via surrogate policy

Xie, Y., Liu, Q., Zhou, Y., Liu, B., Wang, Z. & Peng, J., Jan 1 2019.

Research output: Contribution to conferencePaper

O-Methyltransferase-Mediated Incorporation of a β-Amino Acid in Lanthipeptides

Acedo, J. Z., Bothwell, I. R., An, L., Trouth, A., Frazier, C. & Van Der Donk, W. A., Jan 1 2019, In : Journal of the American Chemical Society. 141, 42, p. 16790-16801 12 p.

Research output: Contribution to journalArticle

Opioid-Induced Hyperalgesia Is Associated with Dysregulation of Circadian Rhythm and Adaptive Immune Pathways in the Mouse Trigeminal Ganglia and Nucleus Accumbens

Zhang, P., Moye, L. S., Southey, B. R., Dripps, I., Sweedler, J. V., Pradhan, A. & Rodriguez-Zas, S. L., Dec 1 2019, In : Molecular Neurobiology. 56, 12, p. 7929-7949 21 p.

Research output: Contribution to journalArticle

Optical excitation and detection of neuronal activity

Hu, C., Sam, R., Shan, M., Nastasa, V., Wang, M., Kim, T., Gillette, M., Sengupta, P. & Popescu, G., Mar 2019, In : Journal of Biophotonics. 12, 3, e201800269.

Research output: Contribution to journalArticle

Optical measures of cerebral arterial stiffness are associated with white matter signal abnormalities and cognitive performance in normal aging

Tan, C. H., Low, K. A., Chiarelli, A. M., Fletcher, M. A., Navarra, R., Burzynska, A. Z., Kong, T. S., Zimmerman, B., Maclin, E. L., Sutton, B. P., Gratton, G. & Fabiani, M., Dec 2019, In : Neurobiology of Aging. 84, p. 200-207 8 p.

Research output: Contribution to journalArticle

Ovarian metabolism of an environmentally relevant phthalate mixture

Warner, G. R., Li, Z., Houde, M. L., Atkinson, C. E., Meling, D. D., Chiang, C. & Flaws, J. A., Jan 1 2019, In : Toxicological Sciences. 169, 1, p. 246-259 14 p.

Research output: Contribution to journalArticle

Open Access

PACAP and other neuropeptide targets link chronic migraine and opioid-induced hyperalgesia in mouse models

Anapindi, K. D. B., Yang, N., Romanova, E. V., Rubakhin, S. S., Tipton, A., Dripps, I., Sheets, Z., Sweedler, J. V. & Pradhan, A. A., Jan 1 2019, In : Molecular and Cellular Proteomics. 18, 12, p. 2447-2458 12 p.

Research output: Contribution to journalArticle

Pasteurella multocida: Genotypes and genomics

Peng, Z., Wang, X., Zhou, R., Chen, H., Wilson, B. A. & Wu, B., Jan 1 2019, In : Microbiology and Molecular Biology Reviews. 83, 4, e00014-19.

Research output: Contribution to journalReview article

Patient satisfaction with treatment outcomes after surgery and/or radiotherapy for spinal metastases

for the AOSpine Knowledge Forum Tumor, Dec 1 2019, In : Cancer. 125, 23, p. 4269-4277 9 p.

Research output: Contribution to journalArticle

Open Access

Peculiar lifespan changes of periodic leg movements during sleep in restless legs syndrome

Ferri, R., DelRosso, L. M., Silvani, A., Cosentino, F. I. I., Picchietti, D. L., Mogavero, P., Manconi, M. & Bruni, O., Jan 1 2019, In : Journal of Sleep Research. e12896.

Research output: Contribution to journalArticle

Pericyte transplantation improves skeletal muscle recovery following hindlimb immobilization

Munroe, M., Dvoretskiy, S., Lopez, A., Leong, J., Dyle, M. C., Kong, H. J., Adams, C. M. & Boppart, M., Jun 1 2019, In : FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 33, 6, p. 7694-7706 13 p.

Research output: Contribution to journalArticle

Periodic Earned Income Tax Credit (EITC) Payment, Financial Stress and Wellbeing: A Longitudinal Study

Kramer, K., Andrade, F. C. D., Greenlee, A. J., Mendenhall, R., Bellisle, D. & Lemons Blanks, R., Sep 15 2019, In : Journal of Family and Economic Issues. 40, 3, p. 511-523 13 p.

Research output: Contribution to journalArticle

Pharmacogenomics-Driven Prediction of Antidepressant Treatment Outcomes: A Machine-Learning Approach With Multi-trial Replication

Athreya, A. P., Neavin, D., Carrillo-Roa, T., Skime, M., Biernacka, J., Frye, M. A., Rush, A. J., Wang, L., Binder, E. B., Iyer, R. K., Weinshilboum, R. M. & Bobo, W. V., Oct 1 2019, In : Clinical Pharmacology and Therapeutics. 106, 4, p. 855-865 11 p.

Research output: Contribution to journalArticle

Phase Dependent Mechanosensitivity in Cardiomyocytes

Williams, B. J. & Saif, M. T. A., Mar 15 2019, In : Experimental Mechanics. 59, 3, p. 387-393 7 p.

Research output: Contribution to journalArticle

Phase II trial of eribulin in patients with metastatic hormone refractory prostate cancer: A trial of the ECOG-ACRIN Cancer Research Group (E5805)

Stein, M. N., Chen, Y. H., Carducci, M. A., Hudes, G. R., Lerma, P. M., Tan, W. W., Dalune, R., Rowland, K. M., Kuzel, T. M. & DiPaola, R. S., Apr 1 2019, In : American Journal of Clinical Oncology: Cancer Clinical Trials. 42, 4, p. 375-381 7 p.

Research output: Contribution to journalArticle

Phase separation of YAP reorganizes genome topology for long-term YAP target gene expression

Cai, D., Feliciano, D., Dong, P., Flores, E., Gruebele, M., Porat-Shliom, N., Sukenik, S., Liu, Z. & Lippincott-Schwartz, J., Dec 1 2019, In : Nature Cell Biology. 21, 12, p. 1578-1589 12 p.

Research output: Contribution to journalArticle

Phosphatidic acid induces conformational changes in Sec18 protomers that prevent SNARE priming

Starr, M. L., Sparks, R. P., Arango, A. S., Hurst, L. R., Zhao, Z., Lihan, M., Jenkins, J. L., Tajkhorshid, E. & Fratti, R. A., Jan 1 2019, In : Journal of Biological Chemistry. 294, 9, p. 3100-3116 17 p.

Research output: Contribution to journalArticle

pH selectively regulates citric acid and lipid production in Yarrowia lipolytica W29 during nitrogen-limited growth on glucose

Zhang, S., Jagtap, S. S., Deewan, A. & Rao, C. V., Jan 20 2019, In : Journal of Biotechnology. 290, p. 10-15 6 p.

Research output: Contribution to journalArticle

Picoliter Droplet Generation for Fast Monitoring the Brain Chemistry with Scaled Silicon Nanodyalisis Probe

Zhang, Y., Esters, A., Bi, O. & Vlasov, Y., Jun 2019, 2019 20th International Conference on Solid-State Sensors, Actuators and Microsystems and Eurosensors XXXIII, TRANSDUCERS 2019 and EUROSENSORS XXXIII. Institute of Electrical and Electronics Engineers Inc., p. 209-212 4 p. 8808797. (2019 20th International Conference on Solid-State Sensors, Actuators and Microsystems and Eurosensors XXXIII, TRANSDUCERS 2019 and EUROSENSORS XXXIII).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Pituitary Adenylate Cyclase-Activating Peptide (PACAP)-Glutamate Co-transmission Drives Circadian Phase-Advancing Responses to Intrinsically Photosensitive Retinal Ganglion Cell Projections by Suprachiasmatic Nucleus

Lindberg, P. T., Mitchell, J. W., Burgoon, P. W., Beaulé, C., Weihe, E., Schäfer, M. K. H., Eiden, L. E., Jiang, S. Z. & Gillette, M. U., Dec 6 2019, In : Frontiers in Neuroscience. 13, 1281.

Research output: Contribution to journalArticle

Open Access

Plasticity in the Human Gut Microbiome Defies Evolutionary Constraints

Gomez, A., Sharma, A. K., Mallott, E. K., Petrzelkova, K. J., Jost Robinson, C. A., Yeoman, C. J., Carbonero, F., Pafco, B., Rothman, J. M., Ulanov, A., Vlckova, K., Amato, K. R., Schnorr, S. L., Dominy, N. J., Modry, D., Todd, A., Torralba, M., Nelson, K. E., Burns, M. B., Blekhman, R. & 8 others, Remis, M., Stumpf, R. M., Wilson, B. A., Gaskins, H. R., Garber, P. A., White, B. A., Leigh, S. R. & Mcmahon, K., Jul 31 2019, In : mSphere. 4, 4, 14 p.

Research output: Contribution to journalArticle

Open Access

Point-of-use detection of ascorbic acid using a spectrometric smartphone-based system

Aguirre, M. Á., Long, K. D., Canals, A. & Cunningham, B. T., Jan 30 2019, In : Food chemistry. 272, p. 141-147 7 p.

Research output: Contribution to journalArticle

Polarisation signals: A new currency for communication

Marshall, N. J., Powell, S. B., Cronin, T. W., Caldwell, R. L., Johnsen, S., Gruev, V., Chiou, T. H. S., Roberts, N. W. & How, M. J., Feb 2019, In : Journal of Experimental Biology. 222, 3, jeb134213.

Research output: Contribution to journalReview article

Poly(lactic-co-glycolic acid) Nanoparticles Loaded with Callistemon citrinus Phenolics Exhibited Anticancer Properties against Three Breast Cancer Cell Lines

Ahmed, R., Tariq, M., Ahmad, I. S., Fouly, H., Fakhar-I-Abbas, Hasan, A. & Kushad, M., Jun 1 2019, In : Journal of Food Quality. 2019, 2638481.

Research output: Contribution to journalArticle

Open Access

Polymeric "clickase" Accelerates the Copper Click Reaction of Small Molecules, Proteins, and Cells

Chen, J., Wang, J., Li, K., Wang, Y., Gruebele, M., Ferguson, A. L. & Zimmerman, S. C., Jun 19 2019, In : Journal of the American Chemical Society. 141, 24, p. 9693-9700 8 p.

Research output: Contribution to journalArticle

Practice advisory for perioperative visual loss associated with spine surgery 2019: An updated report by the American society of anesthesiologists task force on perioperative visual loss, the North American neuro-ophthalmology society, and the society for neuroscience in anesthesiology and critical care

Apfelbaum, J. L., Roth, S., Rubin, D., Connis, R. T., Agarkar, M., Arnold, P. M., Dhall, S. S., Domino, K. B., Hoh, D. J., Hwang, S. W., Lee, A. G., Lee, L. A., Miller, N. R., Newman, N. J., Savino, P. J. & Todd, M. M., Jan 1 2019, In : Anesthesiology. 130, 1, p. 13-30 18 p.

Research output: Contribution to journalArticle

Predicting fatality rates due to earthquakes accounting for community vulnerability

Wang, Y., Gardoni, P., Murphy, C. & Guerrier, S., May 2019, In : Earthquake Spectra. 35, 2, p. 513-536 24 p.

Research output: Contribution to journalArticle

Predicting Short-term MCI-to-AD Progression Using Imaging, CSF, Genetic Factors, Cognitive Resilience, and Demographics

For the Alzheimer’s Disease Neuroimaging Initiative & Iyer, R. K., Dec 1 2019, In : Scientific reports. 9, 1, 2235.

Research output: Contribution to journalArticle

Open Access

Prediction and optimization of mechanical properties of composites using convolutional neural networks

Abueidda, D. W., Almasri, M., Ammourah, R., Ravaioli, U., Jasiuk, I. M. & Sobh, N. A., Nov 1 2019, In : Composite Structures. 227, 111264.

Research output: Contribution to journalArticle

Preface

Donovan, S. M., German, J. B., Lönnerdal, B. & Lucas, A., Jan 1 2019, In : Nestle Nutrition Institute Workshop Series. 90, p. VII-IX

Research output: Contribution to journalReview article

Open Access

Preferential binding of cytochrome c to anionic ligand-coated gold nanoparticles: A complementary computational and experimental approach

Tollefson, E. J., Allen, C. R., Chong, G., Zhang, X., Rozanov, N. D., Bautista, A., Cerda, J. J., Pedersen, J. A., Murphy, C. J., Carlson, E. E. & Hernandez, R., Jun 25 2019, In : ACS Nano. 13, 6, p. 6856-6866 11 p.

Research output: Contribution to journalArticle

Preliminary evaluation of a self-guided fall risk assessment tool for older adults

Sun, R., Aldunate, R. G., Paramathayalan, V. R., Ratnam, R., Jain, S., Morrow, D. G. & Sosnoff, J. J., May 1 2019, In : Archives of Gerontology and Geriatrics. 82, p. 94-99 6 p.

Research output: Contribution to journalArticle

Prenatal and ancestral exposure to di(2-ethylhexyl) phthalate alters gene expression and DNA methylation in mouse ovaries

Rattan, S., Beers, H. K., Kannan, A., Ramakrishnan, A., Brehm, E., Bagchi, I., Irudayaraj, J. M. K. & Flaws, J. A., Sep 15 2019, In : Toxicology and Applied Pharmacology. 379, 114629.

Research output: Contribution to journalArticle

Probabilistic Analysis of Building Fire Severity Based on Fire Load Density Models

Xie, Q., Xiao, J., Gardoni, P. & Hu, K., Jul 1 2019, In : Fire Technology. 55, 4, p. 1349-1375 27 p.

Research output: Contribution to journalArticle

Probabilistic models for the erosion rate in embankments and reliability analysis of earth dams

Andreini, M., Gardoni, P., Pagliara, S. & Sassu, M., Jan 2019, In : Reliability Engineering and System Safety. 181, p. 142-155 14 p.

Research output: Contribution to journalArticle

Probabilistic Models to Assess the Seismic Safety of Rigid Block-Like Elements and the Effectiveness of Two Safety Devices

Contento, A., Gardoni, P., Di Egidio, A. & De Leo, A., Nov 1 2019, In : Journal of Structural Engineering (United States). 145, 11, 04019133.

Research output: Contribution to journalArticle

Probabilistic prediction of intact rock strength using point load tests using a Bayesian formulation

Guevara-Lopez, F., Jimenez, R., Gardoni, P. & Asem, P., Jan 1 2019, In : Georisk.

Research output: Contribution to journalArticle

Procaspase-3 Overexpression in Cancer: A Paradoxical Observation with Therapeutic Potential

Boudreau, M. W., Peh, J. & Hergenrother, P. J., Nov 15 2019, In : ACS chemical biology. 14, 11, p. 2335-2348 14 p.

Research output: Contribution to journalReview article