Research Output

2019
Open Access

Learning to play in a day: Faster deep reinforcement learning by optimality tightening

He, F. S., Liu, Y., Schwing, A. G. & Peng, J., Jan 1 2019.

Research output: Contribution to conferencePaper

Lentivirus-mediated RNAi in skeletal myogenesis

Kim, D., Reyes-Ordoñez, A. & Chen, J., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 95-110 16 p. (Methods in Molecular Biology; vol. 1889).

Research output: Chapter in Book/Report/Conference proceedingChapter

Lipid Analysis of 30 000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry

Neumann, E. K., Ellis, J. F., Triplett, A. E., Rubakhin, S. & Sweedler, J. V., Jan 1 2019, In : Analytical chemistry.

Research output: Contribution to journalArticle

Localized Dielectric Loss Heating in Dielectrophoresis Devices

Kwak, T. J., Hossen, I., Bashir, R., Chang, W. J. & Lee, C. H., Dec 1 2019, In : Scientific reports. 9, 1, 18977.

Research output: Contribution to journalArticle

Open Access

Local wavefront mapping in tissue using computational adaptive optics OCT

South, F. A., Liu, Y. Z., Huang, P. C., Kohlfarber, T. & Boppart, S. A., Mar 1 2019, In : Optics Letters. 44, 5, p. 1186-1189 4 p.

Research output: Contribution to journalArticle

Locking Two Rigid-body Bundles in an Outward-Facing Conformation: The Ion-coupling Mechanism in a LeuT-fold Transporter

Li, J., Zhao, Z. & Tajkhorshid, E., Dec 1 2019, In : Scientific reports. 9, 1, 19479.

Research output: Contribution to journalArticle

Open Access

Longitudinal Continuity

Ford, C. D., Patel, P. G., Sierpina, V. S., Wolffarth, M. W. & Rowen, J. L., Nov 1 2019, In : Journal of General Internal Medicine. 34, 11, 1 p.

Research output: Contribution to journalLetter

Open Access

Long-Term Cryopreservation and Revival of Tissue-Engineered Skeletal Muscle

Grant, L., Raman, R., Cvetkovic, C., Ferrall-Fairbanks, M. C., Pagan-Diaz, G. J., Hadley, P., Ko, E., Platt, M. O. & Bashir, R., Jul 1 2019, In : Tissue Engineering - Part A. 25, 13-14, p. 1023-1036 14 p.

Research output: Contribution to journalArticle

Machine Learning-Assisted Array-Based Biomolecular Sensing Using Surface-Functionalized Carbon Dots

Pandit, S., Banerjee, T., Srivastava, I., Nie, S. & Pan, D., Jan 1 2019, In : ACS Sensors. 4, 10, p. 2730-2737 8 p.

Research output: Contribution to journalArticle

Matrix Topography Regulates Synaptic Transmission at the Neuromuscular Junction

Ko, E., Yu, S. J., Pagan-Diaz, G. J., Mahmassani, Z., Boppart, M. D., Im, S. G., Bashir, R. & Kong, H., Mar 20 2019, In : Advanced Science. 6, 6, 1801521.

Research output: Contribution to journalArticle

Mechanical properties of 3D printed polymeric Gyroid cellular structures: Experimental and finite element study

Abueidda, D. W., Elhebeary, M., Shiang, C. S. A., Pang, S., Abu Al-Rub, R. K. & Jasiuk, I. M., Mar 5 2019, In : Materials and Design. 165, 107597.

Research output: Contribution to journalArticle

Mechanistic interpretation of non-coding variants for discovering transcriptional regulators of drug response

Xie, X., Hanson, C. & Sinha, S., Jul 30 2019, In : BMC biology. 17, 1, 62.

Research output: Contribution to journalArticle

Open Access

Mechanistic Studies of the Kinase Domains of Class IV Lanthipeptide Synthetases

Hegemann, J. D., Shi, L., Gross, M. L. & Van Der Donk, W. A., Jun 5 2019, In : ACS chemical biology. 14, 7, p. 1583-1592 10 p.

Research output: Contribution to journalArticle

Metagenomic binning through low-density hashing

Luo, Y., Yu, Y. W., Zeng, J., Berger, B. & Peng, J., Jan 15 2019, In : Bioinformatics. 35, 2, p. 219-226 8 p.

Research output: Contribution to journalArticle

Open Access

Metal-independent variants of phosphoglycerate mutase promote resistance to nutritional immunity and retention of glycolysis during infection

Radin, J. N., Kelliher, J. L., Solórzano, P. K. P., Grim, K. P., Ramezanifard, R., Slauch, J. M. & Kehl-Fie, T. E., Jul 2019, In : PLoS pathogens. 15, 7, e1007971.

Research output: Contribution to journalArticle

Open Access

Microcavity-Mediated Spectrally Tunable Amplification of Absorption in Plasmonic Nanoantennas

Huang, Q. & Cunningham, B. T., Aug 14 2019, In : Nano letters. 19, 8, p. 5297-5303 7 p.

Research output: Contribution to journalArticle

Mineralization in micropores of calcium phosphate scaffolds

Rustom, L. E., Poellmann, M. J. & Wagoner Johnson, A. J., Jan 1 2019, In : Acta Biomaterialia. 83, p. 435-455 21 p.

Research output: Contribution to journalArticle

MIRAS: Model-based reinforcement learning for microservice resource allocation over scientific workflows

Yang, Z., Nguyen, P., Jin, H. & Nahrstedt, K., Jul 2019, Proceedings - 2019 39th IEEE International Conference on Distributed Computing Systems, ICDCS 2019. Institute of Electrical and Electronics Engineers Inc., p. 122-132 11 p. 8885267. (Proceedings - International Conference on Distributed Computing Systems; vol. 2019-July).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

MMLOC: Multi-mode indoor localization system based on smart access points

Yu, T., Ren, W. & Nahrstedt, K., Nov 12 2019, Proceedings of the 16th EAI International Conference on Mobile and Ubiquitous Systems: Computing, Networking and Services, MobiQuitous 2019. Association for Computing Machinery, p. 473-482 10 p. (ACM International Conference Proceeding Series).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Modeling of Osteoprobe indentation on bone

Idkaidek, A. & Jasiuk, I. M., Feb 2019, In : Journal of the Mechanical Behavior of Biomedical Materials. 90, p. 365-373 9 p.

Research output: Contribution to journalArticle

Modeling the climate change effects on storm surge with metamodels

Contento, A., Xu, H., Gardoni, P. & Guerrier, S., Jan 1 2019, Life-Cycle Analysis and Assessment in Civil Engineering: Towards an Integrated Vision - Proceedings of the 6th International Symposium on Life-Cycle Civil Engineering, IALCCE 2018. Frangopol, D. M., Caspeele, R. & Taerwe, L. (eds.). CRC Press/Balkema, p. 1719-1726 8 p. (Life-Cycle Analysis and Assessment in Civil Engineering: Towards an Integrated Vision - Proceedings of the 6th International Symposium on Life-Cycle Civil Engineering, IALCCE 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Modeling the joint probability distribution of main shock and aftershock spectral accelerations

Hu, S., Tabandeh, A. & Gardoni, P., Jan 1 2019.

Research output: Contribution to conferencePaper

Modular Syntheses of Phenanthroindolizidine Natural Products

Jo, Y. I., Burke, M. D. & Cheon, C. H., Jun 7 2019, In : Organic Letters. 21, 11, p. 4201-4204 4 p.

Research output: Contribution to journalArticle

Modulating Noncovalent Cross-links with Molecular Switches

Epstein, E. S., Martinetti, L., Kollarigowda, R. H., Carey-De La Torre, O., Moore, J. S., Ewoldt, R. H. & Braun, P. V., Feb 27 2019, In : Journal of the American Chemical Society. 141, 8, p. 3597-3604 8 p.

Research output: Contribution to journalArticle

Modulation of anticipatory postural adjustments using a powered ankle orthosis in people with Parkinson's disease and freezing of gait

Petrucci, M. N., MacKinnon, C. D. & Hsiao-Wecksler, E. T., Jul 2019, In : Gait and Posture. 72, p. 188-194 7 p.

Research output: Contribution to journalArticle

Molecular sciences made personal: Developing curiosity in general and organic chemistry with a multi-semester utility value intervention

Zavala, J. A., Chadha, R., Steele, D. M., Ray, C. & Moore, J. S., Jan 1 2019, In : ACS Symposium Series. 1341, p. 105-118 14 p.

Research output: Contribution to journalArticle

Monolayer MoS 2 Nanoribbon Transistors Fabricated by Scanning Probe Lithography

Chen, S., Kim, S., Chen, W., Yuan, J., Bashir, R., Lou, J., Van Der Zande, A. M. & King, W. P., Mar 13 2019, In : Nano letters. 19, 3, p. 2092-2098 7 p.

Research output: Contribution to journalArticle

Morphology of the Musculus Uvulae In Vivo Using MRI and 3D Modeling Among Adults With Normal Anatomy and Preliminary Comparisons to Cleft Palate Anatomy

Perry, J. L., Chen, J. Y., Kotlarek, K. J., Haenssler, A., Sutton, B. P., Kuehn, D. P., Sitzman, T. J. & Fang, X., Sep 1 2019, In : Cleft Palate-Craniofacial Journal. 56, 8, p. 993-1000 8 p.

Research output: Contribution to journalArticle

Motor Learning in People with Multiple Sclerosis: A Systematic Review and Meta-analysis

Tablerion, J. M., Wood, T. A., Hsieh, K. L., Bishnoi, A., Sun, R., Hernandez, M., An, R. & Sosnoff, J. J., Jan 1 2019, (Accepted/In press) In : Archives of Physical Medicine and Rehabilitation.

Research output: Contribution to journalReview article

Moving forward with the primate microbiome: Introduction to a special issue of the American Journal of Primatology

Amato, K. R. & Stumpf, R. M., Oct 1 2019, In : American journal of primatology. 81, 10-11, e23060.

Research output: Contribution to journalEditorial

Msx Homeobox Genes Act Downstream of BMP2 to Regulate Endometrial Decidualization in Mice and in Humans

Nallasamy, S., Kaya Okur, H. S., Bhurke, A., Davila, J., Li, Q., Young, S. L., Taylor, R. N., Bagchi, M. K. & Bagchi, I. C., Jan 1 2019, In : Endocrinology. 160, 7, p. 1631-1644 14 p.

Research output: Contribution to journalArticle

Multi-Attribute Topic Feature Construction for Social Media-based Prediction

Morales, A., Gandhi, N., Chan, M. P. S., Lohmann, S., Sanchez, T., Brady, K. A., Ungar, L., Albarracín, D. & Zhai, C., Jan 22 2019, Proceedings - 2018 IEEE International Conference on Big Data, Big Data 2018. Song, Y., Liu, B., Lee, K., Abe, N., Pu, C., Qiao, M., Ahmed, N., Kossmann, D., Saltz, J., Tang, J., He, J., Liu, H. & Hu, X. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1073-1078 6 p. 8622347. (Proceedings - 2018 IEEE International Conference on Big Data, Big Data 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Multi-cellular engineered living systems: Building a community around responsible research on emergence

Sample, M., Boulicault, M., Allen, C., Bashir, R., Hyun, I., Levis, M., Lowenthal, C., Mertz, D., Montserrat, N., Palmer, M. J., Saha, K. & Zartman, J., Jul 10 2019, In : Biofabrication. 11, 4, 043001.

Research output: Contribution to journalReview article

Open Access

Multicolor Mechanochromism of a Polymer/Silica Composite with Dual Distinct Mechanophores

Kosuge, T., Zhu, X., Lau, V. M., Aoki, D., Martinez, T. J., Moore, J. S. & Otsuka, H., Feb 6 2019, In : Journal of the American Chemical Society. 141, 5, p. 1898-1902 5 p.

Research output: Contribution to journalArticle

Multidimensional Top-Down Proteomics of Brain-Region-Specific Mouse Brain Proteoforms Responsive to Cocaine and Estradiol

Park, H. M., Satta, R., Davis, R. G., Goo, Y. A., Leduc, R. D., Fellers, R. T., Greer, J. B., Romanova, E. V., Rubakhin, S. S., Tai, R., Thomas, P. M., Sweedler, J. V., Kelleher, N. L., Patrie, S. M. & Lasek, A. W., Nov 1 2019, In : Journal of Proteome Research. 18, 11, p. 3999-4012 14 p.

Research output: Contribution to journalArticle

Multi-functional genome-wide CRISPR system for high throughput genotype–phenotype mapping

Lian, J., Schultz, C., Cao, M., HamediRad, M. & Zhao, H., Dec 1 2019, In : Nature communications. 10, 1, 5794.

Research output: Contribution to journalArticle

Open Access

Multimodality imaging and percutaneous closure of right sinus of valsalva to right ventricular outflow tract fistula after transcatheter aortic valve replacement

Mehta, S. S., Adoni, N., Shihabi, A., Bodine, C., Moussa, I. & Gibb, M., Jan 1 2019, In : Journal of Invasive Cardiology. 31, 7, p. E227-E228

Research output: Contribution to journalComment/debate

Multiple cancer-specific antigens are targeted by a chimeric antigen receptor on a single cancer cell

He, Y., Schreiber, K., Wolf, S. P., Wen, F., Steentoft, C., Zerweck, J., Steiner, M., Sharma, P., Michael Shepard, H., Posey, A., June, C. H., Mandel, U., Clausen, H., Leisegang, M., Meredith, S. C., Kranz, D. M. & Schreiber, H., Oct 17 2019, In : JCI Insight. 4, 21, e130416.

Research output: Contribution to journalArticle

Open Access

Multiplexed and tunable transcriptional activation by promoter insertion using nuclease-assisted vector integration

Brown, A., Winter, J., Gapinske, M., Tague, N., Woods, W. S. & Perez-Pinera, P., Jul 9 2019, In : Nucleic acids research. 47, 12, p. e67

Research output: Contribution to journalArticle

Open Access

Multi-scale dynamics at the glassy silica surface

Nguyen, H. A., Liao, C., Wallum, A., Lyding, J. & Gruebele, M., Nov 7 2019, In : Journal of Chemical Physics. 151, 17, 174502.

Research output: Contribution to journalArticle

Multivalent Polymer-Peptide Conjugates: A General Platform for Inhibiting Amyloid Beta Peptide Aggregation

Jiang, X., Halmes, A. J., Licari, G., Smith, J. W., Song, Y., Moore, E. G., Chen, Q., Tajkhorshid, E., Rienstra, C. M. & Moore, J. S., Oct 15 2019, In : ACS Macro Letters. 8, 10, p. 1365-1371 7 p.

Research output: Contribution to journalArticle

MyoTrack: Tracking Subject Participation in Robotic Rehabilitation using sEMG and IMU

Pareek, S., Manjunath, H., Esfahani, E. T. & Kesavadas, T., May 8 2019, 2019 International Symposium on Medical Robotics, ISMR 2019. Institute of Electrical and Electronics Engineers Inc., 8710207. (2019 International Symposium on Medical Robotics, ISMR 2019).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

MyoTrack: Realtime Estimation of Subject Participation in Robotic Rehabilitation Using sEMG and IMU

Pareek, S., Manjunath, H., Esfahani, E. T. & Kesavadas, T., Jan 1 2019, In : IEEE Access. 7, p. 76030-76041 12 p., 8735854.

Research output: Contribution to journalArticle

Open Access

Navigation graph for tiled media streaming

Park, J. & Nahrstedt, K., Oct 15 2019, MM 2019 - Proceedings of the 27th ACM International Conference on Multimedia. Association for Computing Machinery, Inc, p. 447-455 9 p. (MM 2019 - Proceedings of the 27th ACM International Conference on Multimedia).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Neck Circumference and Its Association with Cardiometabolic Risk Factors in Pediatric Population

González-Cortés, C. A., Teran-Garcia, M. D. L., Luevano-Contreras, C., Portales-Pérez, D. P., Vargas-Morales, J. M., Cubillas-Tejeda, A. C., Cossío-Torres, P. E. & Aradillas-García, C., May 21 2019, In : Medicina. 55, 5, 183.

Research output: Contribution to journalArticle

Open Access