Research Output

2020

Knowledge-guided analysis of "omics" data using the KnowEnG cloud platform

Blatti, C., Emad, A., Berry, M. J., Gatzke, L., Epstein, M., Lanier, D., Rizal, P., Ge, J., Liao, X., Sobh, O., Lambert, M., Post, C. S., Xiao, J., Groves, P., Epstein, A. T., Chen, X., Srinivasan, S., Lehnert, E., Kalari, K. R., Wang, L. & 8 others, Weinshilboum, R. M., Song, J. S., Jongeneel, C. V., Han, J., Ravaioli, U., Sobh, N., Bushell, C. B. & Sinha, S., Jan 1 2020, In : PLoS biology. 18, 1, e3000583.

Research output: Contribution to journalArticle

Open Access

Label-free microscopy: A non-invasive new tool to assess gametes and embryo quality

Rubessa, M. & Wheeler, M. B., Jan 1 2020, (Accepted/In press) In : Theriogenology.

Research output: Contribution to journalArticle

Late-life consequences of short-term exposure to di(2-ethylhexyl) phthalate and diisononyl phthalate during adulthood in female mice

Chiang, C., Lewis, L. R., Borkowski, G. & Flaws, J. A., Apr 2020, In : Reproductive Toxicology. 93, p. 28-42 15 p.

Research output: Contribution to journalArticle

Late-stage oxidative C(sp 3)–H methylation

Feng, K., Quevedo, R. E., Kohrt, J. T., Oderinde, M. S., Reilly, U. & White, M. C., Apr 30 2020, In : Nature. 580, 7805, p. 621-627 7 p.

Research output: Contribution to journalArticle

Learning efficient channels with a dual loss autoencoder

Granstedt, J. L., Zhou, W. & Anastasio, M. A., Jan 1 2020, Medical Imaging 2020: Image Perception, Observer Performance, and Technology Assessment. Samuelson, F. W. & Taylor-Phillips, S. (eds.). SPIE, 113160C. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11316).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Learning numerical observers using unsupervised domain adaptation

He, S., Zhou, W., Li, H. & Anastasio, M. A., Jan 1 2020, Medical Imaging 2020: Image Perception, Observer Performance, and Technology Assessment. Samuelson, F. W. & Taylor-Phillips, S. (eds.). SPIE, 113160W. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11316).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Localization of Spiropyran Activation

Grady, M. E., Birrenkott, C. M., May, P. A., White, S. R., Moore, J. S. & Sottos, N. R., Jun 2 2020, In : Langmuir : the ACS journal of surfaces and colloids. 36, 21, p. 5847-5854 8 p.

Research output: Contribution to journalArticle

Markov-Chain Monte Carlo approximation of the Ideal Observer using generative adversarial networks

Zhou, W. & Anastasio, M. A., Jan 1 2020, Medical Imaging 2020: Image Perception, Observer Performance, and Technology Assessment. Samuelson, F. W. & Taylor-Phillips, S. (eds.). SPIE, 113160D. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11316).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Maternal Dietary Intake of Omega-3 Fatty Acids Correlates Positively with Regional Brain Volumes in 1-Month-Old Term Infants

Morton, S. U., Vyas, R., Gagoski, B., Vu, C., Litt, J., Larsen, R. J., Kuchan, M. J., Lasekan, J. B., Sutton, B. P., Grant, P. E. & Ou, Y., Apr 14 2020, In : Cerebral Cortex. 30, 4, p. 2057-2069 13 p.

Research output: Contribution to journalArticle

Mechanisms of action of agrochemicals acting as endocrine disrupting chemicals

Warner, G. R., Mourikes, V. E., Neff, A. M., Brehm, E. & Flaws, J. A., Feb 15 2020, In : Molecular and Cellular Endocrinology. 502, 110680.

Research output: Contribution to journalReview article

Mechano-acoustic sensing of physiological processes and body motions via a soft wireless device placed at the suprasternal notch

Lee, K. H., Ni, X., Lee, J. Y., Arafa, H., Pe, D. J., Xu, S., Avila, R., Irie, M., Lee, J. H., Easterlin, R. L., Kim, D. H., Chung, H. U., Olabisi, O. O., Getaneh, S., Chung, E., Hill, M., Bell, J., Jang, H., Liu, C., Park, J. B. & 12 others, Kim, J., Kim, S. B., Mehta, S., Pharr, M., Tzavelis, A., Reeder, J. T., Huang, I., Deng, Y., Xie, Z., Davies, C. R., Huang, Y. & Rogers, J. A., Feb 1 2020, In : Nature biomedical engineering. 4, 2, p. 148-158 11 p.

Research output: Contribution to journalArticle

Menthol Binding to the Human α4β2 Nicotinic Acetylcholine Receptor Facilitated by Its Strong Partitioning in the Membrane

Shahoei, R. & Tajkhorshid, E., Mar 12 2020, In : Journal of Physical Chemistry B. 124, 10, p. 1866-1880 15 p.

Research output: Contribution to journalArticle

Merging versatile polymer chemistry with multifunctional nanoparticles: An overview of crosslinkable aromatic polyester matrix nanocomposites

Bakir, M., Meyer, J. L., Pang, S., Economy, J. & Jasiuk, I., Feb 14 2020, In : Soft Matter. 16, 6, p. 1389-1403 15 p.

Research output: Contribution to journalArticle

Meta-analysis of honey bee neurogenomic response links Deformed wing virus type A to precocious behavioral maturation

Traniello, I. M., Bukhari, S. A., Kevill, J., Ahmed, A. C., Hamilton, A. R., Naeger, N. L., Schroeder, D. C. & Robinson, G. E., Dec 1 2020, In : Scientific reports. 10, 1, 3101.

Research output: Contribution to journalArticle

Open Access

Metabolic engineering of Parageobacillus thermoglucosidasius for the efficient production of (2R, 3R)-butanediol

Zhou, J., Lian, J. & Rao, C. V., Jan 1 2020, (Accepted/In press) In : Applied Microbiology and Biotechnology.

Research output: Contribution to journalArticle

Microbiome Composition in Pediatric Populations from Birth to Adolescence: Impact of Diet and Prebiotic and Probiotic Interventions

Davis, E. C., Dinsmoor, A. M., Wang, M. & Donovan, S. M., Jan 1 2020, (Accepted/In press) In : Digestive Diseases and Sciences.

Research output: Contribution to journalReview article

Microscopic Characterization of GRP1 PH Domain Interaction with Anionic Membranes

Pant, S. & Tajkhorshid, E., Mar 5 2020, In : Journal of Computational Chemistry. 41, 6, p. 489-499 11 p.

Research output: Contribution to journalArticle

Minimizing Blood Loss in Spine Surgery

Mikhail, C., Pennington, Z., Arnold, P. M., Brodke, D. S., Chapman, J. R., Chutkan, N., Daubs, M. D., DeVine, J. G., Fehlings, M. G., Gelb, D. E., Ghobrial, G. M., Harrop, J. S., Hoelscher, C., Jiang, F., Knightly, J. J., Kwon, B. K., Mroz, T. E., Nassr, A., Riew, K. D., Sekhon, L. H. & 8 others, Smith, J. S., Traynelis, V. C., Wang, J. C., Weber, M. H., Wilson, J. R., Witiw, C. D., Sciubba, D. M. & Cho, S. K., Jan 1 2020, In : Global Spine Journal. 10, 1_suppl, p. 71S-83S

Research output: Contribution to journalArticle

Open Access

Mobile Devices based Eavesdropping of Handwriting

Yu, T., Jin, H. & Nahrstedt, K., Jul 1 2020, In : IEEE Transactions on Mobile Computing. 19, 7, p. 1649-1663 15 p., 8695872.

Research output: Contribution to journalArticle

Model-based design of a multistable origami-enabled crawling robot

Gustafson, K., Angatkina, O. & Wissa, A., Jan 1 2020, In : Smart Materials and Structures. 29, 1, 015013.

Research output: Contribution to journalArticle

Models for generating NCAA men's basketball tournament bracket pools

Ludden, I. G., Khatibi, A., King, D. M. & Jacobson, S. H., Jan 1 2020, (Accepted/In press) In : Journal of Quantitative Analysis in Sports.

Research output: Contribution to journalArticle

Molecular Insights into the Loading and Dynamics of Doxorubicin on PEGylated Graphene Oxide Nanocarriers

Mahdavi, M., Fattahi, A., Tajkhorshid, E. & Nouranian, S., Jan 1 2020, (Accepted/In press) In : ACS Applied Bio Materials.

Research output: Contribution to journalArticle

More behavioral recommendations produce more change: A meta-analysis of efficacy of multibehavior recommendations to reduce nonmedical substance use

Dai, W., Palmer, R., Sunderrajan, A., Durantini, M., Sánchez, F., Glasman, L. R., Chen, F. X. & Albarracín, D., Apr 20 2020, (Accepted/In press) In : Psychology of Addictive Behaviors.

Research output: Contribution to journalArticle

Morphometric analysis of sperm used for IVP by three different separation methods with spatial light interference microscopy

Rubessa, M., Kandel, M. E., Schreiber, S., Meyers, S., Beck, D. H., Popescu, G. & Wheeler, M. B., Jan 1 2020, (Accepted/In press) In : Systems Biology in Reproductive Medicine.

Research output: Contribution to journalArticle

Open Access

Motor Learning in People with Multiple Sclerosis: A Systematic Review and Meta-analysis

Tablerion, J. M., Wood, T. A., Hsieh, K. L., Bishnoi, A., Sun, R., Hernandez, M., An, R. & Sosnoff, J. J., Mar 2020, In : Archives of Physical Medicine and Rehabilitation. 101, 3, p. 512-523 12 p.

Research output: Contribution to journalReview article

Multiaxially-stretchable kirigami-patterned mesh design for graphene sensor devices

Lee, H. C., Hsieh, E. Y., Yong, K. & Nam, S. W., May 1 2020, In : Nano Research. 13, 5, p. 1406-1412 7 p.

Research output: Contribution to journalArticle

Multimodal Nanocarrier Probes Reveal Superior Biodistribution Quantification by Isotopic Analysis over Fluorescence

Deng, H., Konopka, C. J., Cross, T. W. L., Swanson, K. S., Dobrucki, L. W. & Smith, A. M., Jan 28 2020, In : ACS Nano. 14, 1, p. 509-523 15 p.

Research output: Contribution to journalArticle

Multiplexed cytokine detection for immunodiagnostics using silicon photonic microring resonator arrays

Robison, H. M., Escalante, P., Valera, E., Erskine, C. L., Auvil, L., Sasieta, H. C., Bushell, C., Welge, M. & Bailey, R. C., Jan 1 2020, 21st International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2017. Chemical and Biological Microsystems Society, p. 3-4 2 p. (21st International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2017).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Multiresolution GPC-Structured Control of a Single-Loop Cold-Flow Chemical Looping Testbed

Zhang, S., Bentsman, J., Lou, X., Neuschaefer, C., Lee, Y. & El-kebir, H., Apr 7 2020, In : Energies. 13, 7, 1759.

Research output: Contribution to journalArticle

Multi-“Color” Delineation of Bone Microdamages Using Ligand-Directed Sub-5 nm Hafnia Nanodots and Photon Counting CT Imaging

Ostadhossein, F., Tripathi, I., Benig, L., LoBato, D., Moghiseh, M., Lowe, C., Raja, A., Butler, A., Panta, R., Anjomrouz, M., Chernoglazov, A. & Pan, D., Jan 1 2020, In : Advanced Functional Materials. 30, 4, 1904936.

Research output: Contribution to journalArticle

Nanoscale Drug Delivery Systems: From Medicine to Agriculture

Vega-Vásquez, P., Mosier, N. S. & Irudayaraj, J., Feb 18 2020, In : Frontiers in Bioengineering and Biotechnology. 8, 79.

Research output: Contribution to journalReview article

Open Access

Noninvasive diagnosis of nonalcoholic fatty liver disease and quantification of liver fat with radiofrequency ultrasound data using one-dimensional convolutional neural networks

Han, A., Byra, M., Heba, E., Andre, M. P., Erdman, J. W., Loomba, R., Sirlin, C. B. & O'Brien, W. D., May 1 2020, In : Radiology. 295, 2, p. 342-350 9 p.

Research output: Contribution to journalArticle

Non-invasive monitoring of pharmacodynamics during the skin wound healing process using multimodal optical microscopy

Rico-Jimenez, J., Lee, J. H., Alex, A., Musaad, S., Chaney, E., Barkalifa, R., Olson, E., Adams, D., Marjanovic, M., Arp, Z. & Boppart, S. A., Apr 22 2020, In : BMJ Open Diabetes Research and Care. 8, 1, e000974.

Research output: Contribution to journalArticle

Open Access

Nonparametric false discovery rate control for identifying simultaneous signals

Zhao, S. D. & Nguyen, Y. T., Jan 1 2020, In : Electronic Journal of Statistics. 14, 1, p. 110-142 33 p.

Research output: Contribution to journalArticle

Open Access

Nonparametric variable selection and its application to additive models

Feng, Z., Lin, L., Zhu, R. & Zhu, L., Jun 1 2020, In : Annals of the Institute of Statistical Mathematics. 72, 3, p. 827-854 28 p.

Research output: Contribution to journalArticle

Nonribosomal peptide extension by a peptide amino-acyl tRNA ligase

Zhang, Z. & Van Der Donk, W. A., Jan 1 2020, In : Journal of the American Chemical Society. 141, 50, p. 19625-19633 9 p.

Research output: Contribution to journalArticle

Observation of Microheterogeneity in Highly Concentrated Nonaqueous Electrolyte Solutions

Robertson, L. A., Li, Z., Cao, Y., Shkrob, I. A., Tyagi, M., Smith, K. C., Zhang, L., Moore, J. S. & Zhyang, Y., Jan 1 2020, In : Journal of the American Chemical Society. 141, 20, p. 8041-8046 6 p.

Research output: Contribution to journalArticle

On-Chip Electrical Monitoring of Real-Time “Soft” and “Hard” Protein Corona Formation on Carbon Nanoparticles

Srivastava, I., Khan, M. S., Dighe, K., Alafeef, M., Wang, Z., Banerjee, T., Ghonge, T., Grove, L. M., Bashir, R. & Pan, D., Jan 1 2020, (Accepted/In press) In : Small Methods.

Research output: Contribution to journalArticle

Open for Learning: Encouraging Generalization Fosters Knowledge Transfer in Negotiation

Kim, J., Thompson, L. & Loewenstein, J., Feb 1 2020, In : Negotiation and Conflict Management Research. 13, 1, p. 3-23 21 p.

Research output: Contribution to journalArticle

Optically guided mass spectrometry to screen microbial colonies for directed enzyme evolution

Xue, P., Si, T. & Zhao, H., Jan 1 2020, (Accepted/In press) Methods in Enzymology. Academic Press Inc., (Methods in Enzymology).

Research output: Chapter in Book/Report/Conference proceedingChapter

Optimal breast cancer diagnostic strategy using combined ultrasound and diffuse optical tomography

Shihab Uddin, K. M., Zhang, M., Anastasio, M. & Zhu, Q., May 1 2020, In : Biomedical Optics Express. 11, 5, p. 2722-2737 16 p.

Research output: Contribution to journalArticle

Patterns of Racing and Career Duration of Racing Greyhounds in New Zealand

Palmer, A. L., Bolwell, C. F., Stafford, K. J., Gal, A. & Rogers, C. W., May 5 2020, In : Animals. 10, 5, 796.

Research output: Contribution to journalArticle

Open Access

Peculiar lifespan changes of periodic leg movements during sleep in restless legs syndrome

Ferri, R., DelRosso, L. M., Silvani, A., Cosentino, F. I. I., Picchietti, D. L., Mogavero, P., Manconi, M. & Bruni, O., Jun 1 2020, In : Journal of Sleep Research. 29, 3, e12896.

Research output: Contribution to journalArticle

Open Access

Pharmacokinetics of platinum and safety evaluation of carboplatin-impregnated calcium sulfate hemihydrate beads after implantation in healthy cats

Maxwell, E. A., Phillips, H., Clark-Price, S. C., Vieson, M. D., Selmic, L. E., Schaeffer, D. J. & Fan, T. M., Jan 1 2020, (Accepted/In press) In : Veterinary Surgery.

Research output: Contribution to journalArticle

Photoenzymatic enantioselective intermolecular radical hydroalkylation

Huang, X., Wang, B., Wang, Y., Jiang, G., Feng, J. & Zhao, H., Jan 1 2020, (Accepted/In press) In : Nature.

Research output: Contribution to journalArticle

Physics-based probabilistic models: Integrating differential equations and observational data

Tabandeh, A., Asem, P. & Gardoni, P., Nov 2020, In : Structural Safety. 87, 101981.

Research output: Contribution to journalArticle

Polymer-Peptide Conjugates Convert Amyloid into Protein Nanobundles through Fragmentation and Lateral Association

Smith, J. W., Jiang, X., An, H., Barclay, A. M., Licari, G., Tajkhorshid, E., Moore, E. G., Rienstra, C. M., Moore, J. S. & Chen, Q., Feb 28 2020, In : ACS Applied Nano Materials. 3, 2, p. 937-945 9 p.

Research output: Contribution to journalArticle