Research Output

2020

Short Acquisition Time Super-Resolution Ultrasound Microvessel Imaging via Microbubble Separation

Huang, C., Lowerison, M. R., Trzasko, J. D., Manduca, A., Bresler, Y., Tang, S., Gong, P., Lok, U. W., Song, P. & Chen, S., Dec 1 2020, In : Scientific reports. 10, 1, 6007.

Research output: Contribution to journalArticle

Open Access

Short-Wave Infrared Quantum Dots with Compact Sizes as Molecular Probes for Fluorescence Microscopy

Sarkar, S., Le, P., Geng, J., Liu, Y., Han, Z., Zahid, M. U., Nall, D., Youn, Y., Selvin, P. R. & Smith, A. M., Feb 19 2020, In : Journal of the American Chemical Society. 142, 7, p. 3449-3462 14 p.

Research output: Contribution to journalArticle

Should the Environment Be a Human Factor?

Ruecker, S., Grisales, C., Capozzo, J. A., De La Rosa, J. A., Derksen, G., Ferronato, P. B., Sehn, T. C. & Shin, S. S., Jan 1 2020, Advances in Interdisciplinary Practice in Industrial Design - Proceedings of the AHFE International Conference on Interdisciplinary Practice in Industrial Design, 2019. Shin, C. S. (ed.). Springer-Verlag, p. 233-239 7 p. (Advances in Intelligent Systems and Computing; vol. 968).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Signal propagation via open-loop intrathalamic architectures: A computational model

Brown, J. W., Taheri, A., Kenyon, R. V., Berger-Wolf, T. Y. & Llano, D. A., Jan 2020, In : eNeuro. 7, 1, ENEURO.0441-19.2020.

Research output: Contribution to journalArticle

Open Access

Simultaneous electrical detection of IL-6 and PCT using a microfluidic biochip platform

Berger, J., Valera, E., Jankelow, A., Garcia, C., Akhand, M., Heredia, J., Ghonge, T., Liu, C., Font-Bartumeus, V., Oshana, G., Tiao, J. & Bashir, R., Jun 1 2020, In : Biomedical microdevices. 22, 2, 36.

Research output: Contribution to journalArticle

Simultaneous QSM and metabolic imaging of the brain using SPICE: Further improvements in data acquisition and processing

Guo, R., Zhao, Y., Li, Y., Wang, T., Li, Y., Sutton, B. & Liang, Z. P., 2020, (Accepted/In press) In : Magnetic Resonance in Medicine.

Research output: Contribution to journalArticle

Simultaneous time-varying viscosity, elasticity, and mass measurements of single adherent cancer cells across cell cycle

Adeniba, O. O., Corbin, E. A., Ganguli, A., Kim, Y. & Bashir, R., Dec 1 2020, In : Scientific reports. 10, 1, 12803.

Research output: Contribution to journalArticle

Open Access

Single-Cell Classification Using Mass Spectrometry through Interpretable Machine Learning

Xie, Y. R., Castro, D. C., Bell, S. E., Rubakhin, S. & Sweedler, J. V., Jul 7 2020, In : Analytical chemistry. 92, 13, p. 9338-9347 10 p.

Research output: Contribution to journalArticle

Small Molecule Channels Harness Membrane Potential to Concentrate Potassium in trk1Δtrk2Δ Yeast

Hou, J., Daniels, P. N. & Burke, M. D., Jun 19 2020, In : ACS chemical biology. 15, 6, p. 1575-1580 6 p.

Research output: Contribution to journalArticle

Smartphone-Based Multiplex 30-minute Nucleic Acid Test of Live Virus from Nasal Swab Extract

Sun, F., Ganguli, A., Nguyen, J., Brisbin, R., Shanmugam, K., Hirschberg, D. L., Wheeler, M. B., Bashir, R., Nash, D. M. & Cunningham, B. T., May 7 2020, In : Lab on a chip. 20, 9, p. 1621-1627 7 p.

Research output: Contribution to journalArticle

Solutions to ramp-hold dynamic oscillation indentation tests for assessing the viscoelasticity of hydrogel by Kelvin-Voigt fractional derivative modeling

Zhang, H., Lu, T., Zhang, Q., Zhou, Y., Zhu, H., Harms, J., Yang, X., Wan, M. & Insana, M. F., Sep 2020, In : Mechanics of Materials. 148, 103431.

Research output: Contribution to journalArticle

Spatial relational memory in individuals with traumatic brain injury

Rigon, A., Schwarb, H., Klooster, N., Cohen, N. J. & Duff, M. C., Jan 2 2020, In : Journal of Clinical and Experimental Neuropsychology. 42, 1, p. 14-27 14 p.

Research output: Contribution to journalArticle

Spatiotemporal distribution of Pseudomonas aeruginosa alkyl quinolones under metabolic and competitive stress

Cao, T., Sweedler, J. V., Bohn, P. W. & Shrout, J. D., Jul 1 2020, In : mSphere. 5, 4, e00426-20.

Research output: Contribution to journalArticle

Open Access

Strange Advice for Authors: Submit Your Manuscript with a Short Title on a Weekday

Sweedler, J. V., Feb 4 2020, In : Analytical chemistry. 92, 3, p. 2351-2352 2 p.

Research output: Contribution to journalEditorial

Open Access

Streptococcus pneumoniae elaborates persistent and prolonged competent state during pneumonia-derived sepsis

Lin, J., Park, P., Li, H., Oh, M. W., Dobrucki, I. T., Dobrucki, W. & Lau, G. W., Mar 1 2020, In : Infection and immunity. 88, 4, e00919-19.

Research output: Contribution to journalArticle

Structure-guided engineering of the affinity and specificity of CARs against Tn-glycopeptides

Sharma, P., Marada, V. V. V. R., Cai, Q., Kizerwetter, M., He, Y., Wolf, S. P., Schreiber, K., Clausen, H., Schreiber, H. & Kranz, D. M., Jun 30 2020, In : Proceedings of the National Academy of Sciences. 117, 26, p. 15148-15159 12 p., 201920662.

Research output: Contribution to journalArticle

Subchronic and Low Dose of Tributyltin Exposure Leads to Reduced Ovarian Reserve, Reduced Uterine Gland Number, and Other Reproductive Irregularities in Female Mice

Sarmento, I. V., Merlo, E., Meyrelles, S. S., Vasquez, E. C., Warner, G. R., Gonsioroski, A., De La Torre, K., Meling, D. D., Flaws, J. A. & Graceli, J. B., Jul 1 2020, In : Toxicological sciences : an official journal of the Society of Toxicology. 176, 1, p. 74-85 12 p.

Research output: Contribution to journalArticle

Substrate Recognition by the Class II Lanthipeptide Synthetase HalM2

Rahman, I. R., Acedo, J. Z., Liu, X. R., Zhu, L., Arrington, J., Gross, M. L. & Van Der Donk, W. A., Jun 19 2020, In : ACS chemical biology. 15, 6, p. 1473-1486 14 p.

Research output: Contribution to journalArticle

Superior breast cancer metastasis risk stratification using an epithelial-mesenchymal-amoeboid transition gene signature

Emad, A., Ray, T., Jensen, T. W., Parat, M., Natrajan, R., Sinha, S. & Ray, P. S., Jul 8 2020, In : Breast Cancer Research. 22, 1, 1304.

Research output: Contribution to journalArticle

Open Access

Surface Coating Structure and Its Interaction with Cytochrome c in EG6-Coated Nanoparticles Varies with Surface Curvature

Daly, C. A., Allen, C., Rozanov, N., Chong, G., Melby, E. S., Kuech, T. R., Lohse, S. E., Murphy, C. J., Pedersen, J. A. & Hernandez, R., May 12 2020, In : Langmuir. 36, 18, p. 5030-5039 10 p.

Research output: Contribution to journalArticle

Surface Tethering of Inflammation-Modulatory Nanostimulators to Stem Cells for Ischemic Muscle Repair

Leong, J., Hong, Y., Wu, Y., Ko, E., Dvoretskiy, S., Teo, J. Y., Kim, B. S., Kim, K., Jeon, H., Boppart, M., Yang, Y. Y. & Kong, H., May 26 2020, In : ACS Nano. 14, 5, p. 5298-5313 16 p.

Research output: Contribution to journalArticle

Surface tethering of stromal cell-derived factor-1α carriers to stem cells enhances cell homing to ischemic muscle

Teo, J. Y., Ko, E., Leong, J., Hong, J., Jeon, J. S., Yang, Y. Y. & Kong, H., Aug 2020, In : Nanomedicine: Nanotechnology, Biology, and Medicine. 28, 102215.

Research output: Contribution to journalArticle

Surgical or Radiation Therapy for the Treatment of Cervical Spine Metastases: Results From the Epidemiology, Process, and Outcomes of Spine Oncology (EPOSO) Cohort

Bond, M. R., Versteeg, A. L., Sahgal, A., Rhines, L. D., Sciubba, D. M., Schuster, J. M., Weber, M. H., Fehlings, M. G., Lazary, A., Clarke, M. J., Boriani, S., Bettegowda, C., Arnold, P. M., Gokaslan, Z. L. & Fisher, C. G., Feb 1 2020, In : Global Spine Journal. 10, 1, p. 21-29 9 p.

Research output: Contribution to journalArticle

Open Access

Targeted Imaging of Abdominal Aortic Aneurysm: Biology Over Structure

Dobrucki, L. W. & Sinusas, A. J., Mar 1 2020, In : Circulation. Cardiovascular imaging. 13, 3, p. e010495

Research output: Contribution to journalEditorial

The Addition of Executive Editors: A Change for the Better!

Sweedler, J. V., Pemberton, J. & Zhang, X., May 5 2020, In : Analytical chemistry. 92, 9, p. 6185-6186 2 p.

Research output: Contribution to journalEditorial

The effect of the sodium-glucose cotransporter type-2 inhibitor dapagliflozin on glomerular filtration rate in healthy cats

Gal, A., Burton, S. E., Weidgraaf, K., Singh, P., Lopez-Villalobos, N., Jacob, A., Malabu, U. & Burchell, R., Jan 2020, In : Domestic Animal Endocrinology. 70, 106376.

Research output: Contribution to journalArticle

The effects of a phthalate metabolite mixture on antral follicle growth and sex steroid synthesis in mice

Meling, D. D., Warner, G. R., Szumski, J. R., Gao, L., Gonsioroski, A. V., Rattan, S. & Flaws, J. A., Feb 1 2020, In : Toxicology and Applied Pharmacology. 388, 114875.

Research output: Contribution to journalArticle

The Fellowship of the Rings: Macrocyclic Antibiotic Peptides Reveal an Anti-Gram-Negative Target

McLaughlin, M. I. & Van Der Donk, W. A., Feb 4 2020, In : Biochemistry. 59, 4, p. 343-345 3 p.

Research output: Contribution to journalComment/debate

Open Access

The FMRP-MOV10 complex: A translational regulatory switch modulated by G-Quadruplexes

Kenny, P. J., Kim, M., Skariah, G., Nielsen, J., Lannom, M. C. & Ceman, S., Jan 24 2020, In : Nucleic acids research. 48, 2, p. 862-878 17 p.

Research output: Contribution to journalArticle

Open Access

The generation of enlarged eroded pores upon existing intracortical canals is a major contributor to endocortical trabecularization

Andreasen, C. M., Bakalova, L. P., Brüel, A., Hauge, E. M., Kiil, B. J., Delaisse, J. M., Kersh, M. E., Thomsen, J. S. & Andersen, T. L., Jan 2020, In : Bone. 130, 115127.

Research output: Contribution to journalArticle

The gut microbiota communities of wild arboreal and ground-feeding tropical primates are affected differently by habitat disturbance

Barelli, C., Barelli, C., Barelli, C., Albanese, D., Stumpf, R. M., Stumpf, R. M., Asangba, A., Donati, C., Rovero, F., Rovero, F. & Hauffe, H. C., Jun 2020, In : mSystems. 5, 3, e00061-20.

Research output: Contribution to journalArticle

Open Access

The Impact of Environmental Chemicals on the Gut Microbiome

Chiu, K., Warner, G., Nowak, R. A., Flaws, J. A. & Mei, W., Aug 1 2020, In : Toxicological Sciences. 176, 2, p. 253-284 32 p., kfaa065.

Research output: Contribution to journalArticle

Open Access

The Impact of Focused Attention on Emotional Experience: A Functional MRI Investigation

Dolcos, F., Katsumi, Y., Shen, C., Bogdan, P. C., Jun, S., Larsen, R., Heller, W., Freeman Bost, K. K. & Dolcos, S. M., 2020, (Accepted/In press) In : Cognitive, Affective and Behavioral Neuroscience.

Research output: Contribution to journalArticle

The mechanism of bidirectional pH taxis in Bacillus subtilis

Tohidifar, P., Plutz, M. J., Ordal, G. W. & Rao, C. V., Feb 1 2020, In : Journal of bacteriology. 202, 4, e00491-19.

Research output: Contribution to journalArticle

Open Access
Open Access

The relationship between tibiofemoral geometry and musculoskeletal function during normal activity

Martelli, S., Sancisi, N., Conconi, M., Pandy, M. G., Kersh, M. E., Parenti-Castelli, V. & Reynolds, K. J., Jul 2020, In : Gait and Posture. 80, p. 374-382 9 p.

Research output: Contribution to journalArticle

The structural fate of lipid nanoparticles in the extracellular matrix

Bandara, S. R., Molley, T. G., Kim, H., Bharath, P. A., Kilian, K. & Leal, C., Jan 2020, In : Materials Horizons. 7, 1, p. 125-134 10 p.

Research output: Contribution to journalArticle

The ‘in vivo lifestyle’ of bile acid 7α-dehydroxylating bacteria: comparative genomics, metatranscriptomic, and bile acid metabolomics analysis of a defined microbial community in gnotobiotic mice

Ridlon, J. M., Devendran, S., Alves, J. M., Doden, H., Wolf, P. G., Pereira, G. V., Ly, L., Volland, A., Takei, H., Nittono, H., Murai, T., Kurosawa, T., Chlipala, G. E., Green, S. J., Hernandez, A. G., Fields, C. J., Wright, C. L., Kakiyama, G., Cann, I., Kashyap, P. & 2 others, McCracken, V. & Gaskins, H. R., May 3 2020, In : Gut Microbes. 11, 3, p. 381-404 24 p.

Research output: Contribution to journalArticle

Tissue-guided LASSO for prediction of clinical drug response using preclinical samples

Huang, E. W., Bhope, A., Lim, J., Sinha, S. & Emad, A., 2020, In : PLoS computational biology. 16, 1, e1007607.

Research output: Contribution to journalArticle

Open Access

Towards oilcane: Engineering hyperaccumulation of triacylglycerol into sugarcane stems

Parajuli, S., Kannan, B., Karan, R., Sanahuja, G., Liu, H., Garcia-Ruiz, E., Kumar, D., Singh, V., Zhao, H., Long, S., Shanklin, J. & Altpeter, F., Jul 1 2020, In : GCB Bioenergy. 12, 7, p. 476-490 15 p.

Research output: Contribution to journalArticle

Open Access

Transparent and Flexible Electronics Assembled with Metallic Nanowire-Layered Nondrying Glycerogel

Seo, Y., Kim, B. S., Ballance, W. C., Aw, N., Sutton, B. & Kong, H., Mar 18 2020, In : ACS Applied Materials and Interfaces. 12, 11, p. 13040-13050 11 p.

Research output: Contribution to journalArticle

Treatment of a Mouse Model of ALS by In Vivo Base Editing

Lim, C. K. W., Gapinske, M., Brooks, A. K., Woods, W. S., Powell, J. E., Zeballos C., M. A., Winter, J., Perez-Pinera, P. & Gaj, T., Jan 1 2020, (Accepted/In press) In : Molecular Therapy. 28, 4, p. 1177-1189 13 p.

Research output: Contribution to journalArticle

Triggered Transience of Plastic Materials by a Single Electron Transfer Mechanism

Feinberg, A. M., Davydovich, O., Lloyd, E. M., Ivanoff, D. G., Shiang, B., Sottos, N. R. & Moore, J. S., Feb 26 2020, In : ACS Central Science. 6, 2, p. 266-273 8 p.

Research output: Contribution to journalArticle

Open Access

TRPM8 as the rapid testosterone signaling receptor: Implications in the regulation of dimorphic sexual and social behaviors

Mohandass, A., Krishnan, V., Gribkova, E. D., Asuthkar, S., Baskaran, P., Nersesyan, Y., Hussain, Z., Wise, L. M., George, R. E., Stokes, N., Alexander, B. M., Cohen, A. M., Pavlov, E. V., Llano, D. A., Zhu, M. X., Thyagarajan, B. & Zakharian, E., Aug 1 2020, In : FASEB Journal. 34, 8, p. 10887-10906 20 p.

Research output: Contribution to journalArticle

Open Access

Two-photon microscope using a fiber-based approach for supercontinuum generation and light delivery to a small-footprint optical head

Zhao, Y., Maguluri, G., Daniel Ferguson, R., Tu, H., Paul, K., Boppart, S. A., Llano, D. A. & Iftimia, N., Feb 15 2020, In : Optics Letters. 45, 4, p. 909-912 4 p.

Research output: Contribution to journalArticle

Two radical-dependent mechanisms for anaerobic degradation of the globally abundant organosulfur compound dihydroxypropanesulfonate

Liu, J., Wei, Y., Lin, L., Teng, L., Yin, J., Lu, Q., Chen, J., Zheng, Y., Li, Y., Xu, R., Zhai, W., Liu, Y., Liu, Y., Cao, P., Ang, E. L., Zhao, H., Yuchi, Z. & Zhang, Y., Jul 7 2020, In : Proceedings of the National Academy of Sciences of the United States of America. 117, 27, p. 15599-155608 140010 p.

Research output: Contribution to journalArticle