Research Output

Filter
Letter
2020

Electrical recognition of the twenty proteinogenic amino acids using an aerolysin nanopore

Ouldali, H., Sarthak, K., Ensslen, T., Piguet, F., Manivet, P., Pelta, J., Behrends, J. C., Aksimentiev, A. & Oukhaled, A., Feb 1 2020, In : Nature Biotechnology. 38, 2, p. 176-181 6 p.

Research output: Contribution to journalLetter

2019
Open Access

Implementation of permeation rules leads to a FabI inhibitor with activity against Gram-negative pathogens

Parker, E. N., Drown, B. S., Geddes, E. J., Lee, H. Y., Ismail, N., Lau, G. W. & Hergenrother, P. J., Nov 18 2019, In : Nature Microbiology.

Research output: Contribution to journalLetter

Increasing Diversity in Evolutionary Anthropological Sciences—the IDEAS Program

Malhi, R. S., Antón, S. C. & Fuentes, A., May 2019, In : American Anthropologist. 121, 2, p. 478-479 2 p.

Research output: Contribution to journalLetter

Open Access

Leveraging crowdsourcing to accelerate global health solutions

Davis, S., Button-Simons, K., Bensellak, T., Ahsen, E. M., Checkley, L., Foster, G. J., Su, X., Moussa, A., Mapiye, D., Khoo, S. K., Nosten, F., Anderson, T. J. C., Vendrely, K., Bletz, J., Yu, T., Panji, S., Ghouila, A., Mulder, N., Norman, T., Kern, S. & 4 others, Meyer, P., Stolovitzky, G., Ferdig, M. T. & Siwo, G. H., Aug 1 2019, In : Nature Biotechnology. 37, 8, p. 848-850 3 p.

Research output: Contribution to journalLetter

Open Access

Measuring transcription at a single gene copy reveals hidden drivers of bacterial individuality

Wang, M., Zhang, J., Xu, H. & Golding, I., Dec 1 2019, In : Nature Microbiology. 4, 12, p. 2118-2127 10 p.

Research output: Contribution to journalLetter

Misunderstood parameter of NCBI BLAST impacts the correctness of bioinformatics workflows

Shah, N., Nute, M. G., Warnow, T. & Pop, M., May 1 2019, In : Bioinformatics. 35, 9, p. 1613-1614 2 p.

Research output: Contribution to journalLetter

Phenotyping photosynthesis on the limit - a critical examination of RACiR

Taylor, S. H. & Long, S. P., Jan 1 2019, In : The New phytologist. 221, 2, p. 621-624 4 p.

Research output: Contribution to journalLetter

Open Access

Reply to: fMRI replicability depends upon sufficient individual-level data

Turner, B. O., Santander, T., Paul, E. J., Barbey, A. K. & Miller, M. B., Dec 1 2019, In : Communications biology. 2, 1, 129.

Research output: Contribution to journalLetter

Open Access

Reply to: Brazilian ethanol expansion subject to limitations

Jaiswal, D., De Souza, A. P., Larsen, S., LeBauer, D. S., Miguez, F. E., Sparovek, G., Bollero, G., Buckeridge, M. S. & Long, S. P., Mar 1 2019, In : Nature Climate Change. 9, 3, p. 211-212 2 p.

Research output: Contribution to journalLetter

2018

Arrival routes of first Americans uncertain

Potter, B. A., Beaudoin, A. B., Haynes, C. V., Holliday, V. T., Holmes, C. E., Ives, J. W., Kelly, R., Llamas, B., Malhi, R., Miller, S., Reich, D., Reuther, J. D., Schiffels, S. & Surovell, T., Mar 16 2018, In : Science. 359, 6381, p. 1224-1225 2 p.

Research output: Contribution to journalLetter

KBase: The United States department of energy systems biology knowledgebase

Arkin, A. P., Cottingham, R. W., Henry, C. S., Harris, N. L., Stevens, R. L., Maslov, S., Dehal, P., Ware, D., Perez, F., Canon, S., Sneddon, M. W., Henderson, M. L., Riehl, W. J., Murphy-Olson, D., Chan, S. Y., Kamimura, R. T., Kumari, S., Drake, M. M., Brettin, T. S., Glass, E. M. & 61 others, Chivian, D., Gunter, D., Weston, D. J., Allen, B. H., Baumohl, J., Best, A. A., Bowen, B., Brenner, S. E., Bun, C. C., Chandonia, J. M., Chia, J. M., Colasanti, R., Conrad, N., Davis, J. J., Davison, B. H., Dejongh, M., Devoid, S., Dietrich, E., Dubchak, I., Edirisinghe, J. N., Fang, G., Faria, J. P., Frybarger, P. M., Gerlach, W., Gerstein, M., Greiner, A., Gurtowski, J., Haun, H. L., He, F., Jain, R., Joachimiak, M. P., Keegan, K. P., Kondo, S., Kumar, V., Land, M. L., Meyer, F., Mills, M., Novichkov, P. S., Oh, T., Olsen, G. J., Olson, R., Parrello, B., Pasternak, S., Pearson, E., Poon, S. S., Price, G. A., Ramakrishnan, S., Ranjan, P., Ronald, P. C., Schatz, M. C., Seaver, S. M. D., Shukla, M., Sutormin, R. A., Syed, M. H., Thomason, J., Tintle, N. L., Wang, D., Xia, F., Yoo, H., Yoo, S. & Yu, D., Jul 6 2018, In : Nature Biotechnology. 36, 7, p. 566-569 4 p.

Research output: Contribution to journalLetter

Translucent windows: how uncertainty in competitive interactions impacts detection of community pattern

D'Andrea, R., Ostling, A. & O'Dwyer, J. P., Jun 2018, In : Ecology Letters. 21, 6, p. 826-835 10 p.

Research output: Contribution to journalLetter

2017

HM2-phage resistant solventogenic Clostridium saccharoperbutylacetonicum N1-4 shows increased exopolysaccharide production

Liu, X., Turchi, B., Mok, K. C., Taga, M. E. & Miller, M. J., Oct 1 2017, In : FEMS microbiology letters. 364, 19, fnx191.

Research output: Contribution to journalLetter

2016

Last Word on Viewpont: On the rigorous study of exercise adaptations: Why mRNA might not be enough?

Miller, B. F., Konopka, A. R. & Hamilton, K. L., Aug 2016, In : Journal of Applied Physiology. 121, 2, 1 p.

Research output: Contribution to journalLetter

2015

Anthropological Genetics

Kitchen, A., Non, A. L., Gravlee, C. C., Mulligan, C. J., Warinner, C., Lewis, C. M., Bankoff, R. J., Randrianatoandro, H. D. D., Perry, G. H., Malhi, R. S., Bader, A. C. & Raff, J., Dec 1 2015, In : American Anthropologist. 117, 4, p. 736-737 2 p.

Research output: Contribution to journalLetter

Engaging Native Americans in Genomics Research

Malhi, R. S. & Bader, A. C., Dec 1 2015, In : American Anthropologist. 117, 4, p. 743-744 2 p.

Research output: Contribution to journalLetter

Relocation risky for bumblebee colonies

Lozier, J. D., Cameron, S. A., Duennes, M. A., Strange, J. P., Williams, P. H., Goulson, D., Brown, M. J. F., Morales, C. & Jepsen, S., Oct 16 2015, In : Science. 350, 6258, p. 286-287 2 p.

Research output: Contribution to journalLetter

The rs1049353 polymorphism in the CNR1 gene interacts with childhood abuse to predict posttraumatic threat symptoms

Mota, N., Sumner, J. A., Lowe, S. R., Neumeister, A., Uddin, M., Aiello, A. E., Wildman, D. E., Galea, S., Koenen, K. C. & Pietrzak, R. H., Dec 2015, In : Journal of Clinical Psychiatry. 76, 12, p. e1622-e1623

Research output: Contribution to journalLetter

2014

Conclusive evidence of replication of a plant virus in honeybees is lacking

Allen Miller, W., Carrillo-Tripp, J., Bonning, B. C., Dolezal, A. G. & Toth, A. L., May 27 2014, In : mBio. 5, 3, 1 p., e00985-14.

Research output: Contribution to journalLetter

Development of 14 microsatellite markers in the Queensland koala (Phascolarctos cinereus adustus) using next generation sequencing technology

Ruiz-Rodriguez, C. T., Ishida, Y., Greenwood, A. D. & Roca, A. L., Jun 2014, In : Conservation Genetics Resources. 6, 2, p. 429-431 3 p.

Research output: Contribution to journalLetter

Development of nineteen polymorphic microsatellite loci in the threatened polar bear (Ursus maritimus) using next generation sequencing

Brandt, J. R., Van Coeverden de Groot, P. J., Zhao, K., Dyck, M. G., Boag, P. T. & Roca, A. L., Mar 1 2014, In : Conservation Genetics Resources. 6, 1, p. 59-61 3 p.

Research output: Contribution to journalLetter

Early Americans: Misstated results

Kennett, D. J., Asmerom, Y., Kemp, B. M., Polyak, V., Bolnick, D. A., Malhi, R. S. & Culleton, B. J., Jan 1 2014, In : Science. 345, 6195, 1 p.

Research output: Contribution to journalLetter

Reply to skoyles: Decline in growth rate, not muscle mass, predicts the human childhood peak in brain metabolism

Kuzawa, C. W., Chugani, H. T., Grossman, L. I., Lipovich, L., Muzik, O., Hof, P. R., Wildman, D. E., Sherwood, C. C., Leonard, W. R. & Lange, N., Nov 18 2014, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 46, p. E4910

Research output: Contribution to journalLetter

The evolutionary causes of egg rejection in European thrushes (Turdus spp.): A reply to M. Soler

Samas, P., Hauber, M. E., Cassey, P. & Grim, T., Oct 4 2014, In : Frontiers in Zoology. 11, 1, 72.

Research output: Contribution to journalLetter

2013

Duel or diversion? Conscientiousness and executive function in the prediction of health and longevity

Bogg, T. & Roberts, B. W., Jun 2013, In : Annals of Behavioral Medicine. 45, 3, p. 400-401 2 p.

Research output: Contribution to journalLetter

One hundred years of solitude: Integrating single-strain inoculations with community perspectives in the legume-rhizobium symbiosis

Friesen, M. L. & Heath, K. D., Apr 1 2013, In : New Phytologist. 198, 1, p. 7-9 3 p.

Research output: Contribution to journalLetter

Reply to Maitre et al

Johnson, R. W., Donovan, S. M. & Dilger, R. N., Apr 1 2013, In : Journal of Nutrition. 143, 4, 1 p.

Research output: Contribution to journalLetter

2012

A European science plan to sustainably increase food security under climate change

Soussana, J. F., Fereres, E., Long, S. P., Mohren, F. G. M. J., Pandya-Lorch, R., Peltonen-Sainio, P., Porter, J. R., Rosswall, T. & von Braun, J., Nov 1 2012, In : Global change biology. 18, 11, p. 3269-3271 3 p.

Research output: Contribution to journalLetter

Urgent need for a common metric to make precipitation manipulation experiments comparable

Vicca, S., Gilgen, A. K., Camino Serrano, M., Dreesen, F. E., Dukes, J. S., Estiarte, M., Gray, S. B., Guidolotti, G., Hoeppner, S. S., Leakey, A. D. B., Ogaya, R., Ort, D. R., Ostrogovic, M. Z., Rambal, S., Sardans, J., Schmitt, M., Siebers, M., van der Linden, L., van Straaten, O. & Granier, A., Aug 1 2012, In : New Phytologist. 195, 3, p. 518-522 5 p.

Research output: Contribution to journalLetter

2011

Competencies: A cure for pre-med curriculum

Anderson, W. A., Amasino, R. M., Ares, M., Banerjee, U., Bartel, B., Corces, V. G., Drennan, C. L., Elgin, S. C. R., Epstein, I. R., Fanning, E., Guillette, L. J., Handelsman, J. O., Hatfull, G. F., Hoy, R. R., Kelley, D., Leinwand, L. A., Losick, R., Lu, Y., Lynn, D. G., Neuhauser, C. & 13 others, O'Dowd, D. K., Olivera, T., Pevzner, P., Richards-Kortum, R. R., Rine, J., Sah, R. L., Strobel, S. A., Walker, G. C., Walt, D. R., Warner, I. M., Wessler, S., Willard, H. F. & Zare, R. N., Nov 11 2011, In : Science. 334, 6057, p. 760-761 2 p.

Research output: Contribution to journalLetter

Creating a buzz about insect genomes

Robinson, G. E., Hackett, K. J., Purcell-Miramontes, M., Brown, S. J., Evans, J. D., Goldsmith, M. R., Lawson, D., Okamuro, J., Robertson, H. M. & Schneider, D. J., Mar 18 2011, In : Science. 331, 6023, 1 p.

Research output: Contribution to journalLetter

2010

Climate change and the integrity of science

Sills, J., Gleick, P. H., Adams, R. M., Amasino, R. M., Anders, E., Anderson, D. J., Anderson, W. W., Anselin, L. E., Arroyo, M. K., Asfaw, B., Ayala, F. J., Bax, A., Bebbington, A. J., Bell, G., Bennett, M. V. L., Bennetzen, J. L., Berenbaum, M. R., Berlin, O. B., Bjorkman, P. J., Blackburn, E. & 236 others, Blamont, J. E., Botchan, M. R., Boyer, J. S., Boyle, E. A., Branton, D., Briggs, S. P., Briggs, W. R., Brill, W. J., Britten, R. J., Broecker, W. S., Brown, J. H., Brown, P. O., Brunger, A. T., Cairns, J., Canfield, D. E., Carpenter, S. R., Carrington, J. C., Cashmore, A. R., Castilla, J. C., Cazenave, A., Chapin, F. S., Ciechanover, A. J., Clapham, D. E., Clark, W. C., Clayton, R. N., Coe, M. D., Conwell, E. M., Cowling, E. B., Cowling, R. M., Cox, C. S., Croteau, R. B., Crothers, D. M., Crutzen, P. J., Daily, G. C., Dalrymple, G. B., Dangl, J. L., Darst, S. A., Davies, D. R., Davis, M. B., De Camilli, P. V., Dean, C., Defries, R. S., Deisenhofer, J., Delmer, D. P., Delong, E. F., Derosier, D. J., Diener, T. O., Dirzo, R., Dixon, J. E., Donoghue, M. J., Doolittle, R. F., Dunne, T., Ehrlich, P. R., Eisenstadt, S. N., Eisner, T., Emanuel, K. A., Englander, S. W., Ernst, W. G., Falkowski, P. G., Feher, G., Ferejohn, J. A., Fersht, A., Fischer, E. H., Fischer, R., Flannery, K. V., Frank, J., Frey, P. A., Fridovich, I., Frieden, C., Futuyma, D. J., Gardner, W. R., Garrett, C. J. R., Gilbert, W., Goldberg, R. B., Goodenough, W. H., Goodman, C. S., Goodman, M., Greengard, P., Hake, S., Hammel, G., Hanson, S., Harrison, S. C., Hart, S. R., Hartl, D. L., Haselkorn, R., Hawkes, K., Hayes, J. M., Hille, B., Hökfelt, T., House, J. S., Hout, M., Hunten, D. M., Izquierdo, I. A., Jagendorf, A. T., Janzen, D. H., Jeanloz, R., Jencks, C. S., Jury, W. A., Kaback, H. R., Kailath, T., Kay, P., Kay, S. A., Kennedy, D., Kerr, A., Kessler, R. C., Khush, G. S., Kieffer, S. W., Kirch, P. V., Kirk, K., Kivelson, M. G., Klinman, J. P., Klug, A., Knopoff, L., Kornberg, H., Kutzbach, J. E., Lagarias, J. C., Lambeck, K., Landy, A., Langmuir, C. H., Larkins, B. A., Pichon, X. T. L. E., Lenski, R. E., Leopold, E. B., Levin, S. A., Levitt, M., Likens, G. E., Lippincott-Schwartz, J., Lorand, L., Lovejoy, C. O., Lynch, M., Mabogunje, A. L., Malone, T. F., Manabe, S., Marcus, J., Massey, D. S., Mcwilliams, J. C., Medina, E., Melosh, H. J., Meltzer, D. J., Michener, C. D., Miles, E. L., Mooney, H. A., Moore, P. B., Morel, F. M. M., Mosley-Thompson, E. S., Moss, B., Munk, W. H., Myers, N., Nair, G. B., Nathans, J., Nester, E. W., Nicoll, R. A., Novick, R. P., O'Connell, J. F., Olsen, P. E., Opdyke, N. D., Oster, G. F., Ostrom, E., Pace, N. R., Paine, R. T., Palmiter, R. D., Pedlosky, J., Petsko, G. A., Pettengill, G. H., Philander, S. G., Piperno, D. R., Pollard, T. D., Price, P. B., Reichard, P. A., Reskin, B. F., Ricklefs, R. E., Rivest, R. L., Roberts, J. D., Romney, A. K., Rossmann, M. G., Russell, D. W., Rutter, W. J., Sabloff, J. A., Sagdeev, R. Z., Sahlins, M. D., Salmond, A., Sanes, J. R., Schekman, R., Schellnhuber, J., Schindler, D. W., Schmitt, J., Schneider, S. H., Schramm, V. L., Sederoff, R. R., Shatz, C. J., Sherman, F., Sidman, R. L., Sieh, K., Simons, E. L., Singer, B. H., Singer, M. F., Skyrms, B., Sleep, N. H., Smith, B. D., Snyder, S. H., Sokal, R. R., Spencer, C. S., Steitz, T. A., Strier, K. B., Südhof, T. C., Taylor, S. S., Terborgh, J., Thomas, D. H., Thompson, L. G., Tjian, R. T., Turner, M. G., Uyeda, S., Valentine, J. W., Valentine, J. S., Van Etten, J. L., Van Holde, K. E., Vaughan, M., Verba, S., Von Hippel, P. H., Wake, D. B., Walker, A., Walker, J. E., Watson, E. B., Watson, P. J., Weigel, D., Wessler, S. R., West-Eberhard, M. J., White, T. D., Wilson, W. J., Wolfenden, R. V., Wood, J. A., Woodwell, G. M., Wright, H. E., Wu, C., Wunsch, C. & Zoback, M. L., May 7 2010, In : Science. 328, 5979, p. 689-690 2 p.

Research output: Contribution to journalLetter

Response: Strain-specific activation of NF-B by Helicobacter pylori CagA

Lamb, A., Li, J. D., Hatakeyama, M., Peek, R. M., Blanke, S. R. & Chen, L. F., Jan 1 2010, In : EMBO Reports. 11, 1, p. 11-12 2 p.

Research output: Contribution to journalLetter

Sexual selection: A dynamic state of affairs. Response to the comments of Cornwallis and Uller in the article: Towards an evolutionary ecology of sexual traits

Safran, R. J., Vitousek, M. N., Hauber, M. E. & Ghalambor, C. K., Aug 1 2010, In : Trends in Ecology and Evolution. 25, 8, p. 429-430 2 p.

Research output: Contribution to journalLetter

2009

A recommendation for naming transcription factor proteins in the grasses

Gray, J., Bevan, M., Brutnell, T., Buell, C. R., Cone, K., Hake, S., Jackson, D., Kellogg, E., Lawrence, C., McCouch, S., Mockler, T., Moose, S., Paterson, A., Peterson, T., Rokshar, D., Souza, G. M., Springer, N., Stein, N., Timmermans, M., Wang, G. L. & 1 others, Grotewold, E., Jan 2009, In : Plant physiology. 149, 1, p. 4-6 3 p.

Research output: Contribution to journalLetter

2008

Changes to NIH grant system may backfire

Karp, P. D., Sherlock, G., Gerlt, J. A., Sim, I., Paulsen, I., Babbitt, P. C., Laderoute, K., Hunter, L., Sternberg, P., Wooley, J. & Bourne, P. E., Nov 21 2008, In : Science. 322, 5905, p. 1187-1188 2 p.

Research output: Contribution to journalLetter

Questionable performance of a questionnaire

Janket, S. J., Bollu, P. & Zhao, S. D., Oct 1 2008, In : Journal of Dental Research. 87, 10, p. e1

Research output: Contribution to journalLetter

Sin nombre virus infection in deer mice, Channel Islands, California

Orrock, J. L. & Allan, B. F., Dec 2008, In : Emerging infectious diseases. 14, 12, p. 1965-1966 2 p.

Research output: Contribution to journalLetter

Response [3]

Long, S. P., Ainsworth, E. A., Leakey, A. D. B., Ort, D. R., Nösberger, J. & Schimel, D., Jan 26 2007, In : Science. 315, 5811, 1 p.

Research output: Contribution to journalLetter

Retraction [1]

Roberts, R. M., Sivaguru, M. & Yong, H. Y., Jul 27 2007, In : Science. 317, 5837, 1 p.

Research output: Contribution to journalLetter

The authors reply [2]

Agrawal, A. A., Ackerly, D. D., Adler, F., Arnold, A. E., Cáceres, C., Doak, D. F., Post, E., Hudson, P. J., Maron, J., Mooney, K. A., Power, M., Stachowicz, J., Strauss, S., Turner, M. G. & Werner, E., Aug 1 2007, In : Frontiers in Ecology and the Environment. 5, 6, p. 294-295 2 p.

Research output: Contribution to journalLetter