Research Output 1971 2019

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2018

90th Anniversary Commentary: Prebiotics in Infancy for Allergy Prevention: Promising Findings, but No Consensus

Donovan, S. M., Oct 1 2018, In : Journal of Nutrition. 148, 10, p. 1691-1692 2 p.

Research output: Contribution to journalComment/debate

Prebiotics
Anniversaries and Special Events
Hypersensitivity

Advancing the ethics of paleogenomics

Bardill, J., Bader, A. C., Garrison, N. A., Bolnick, D. A., Raff, J. A., Walker, A. & Malhi, R. S., Apr 27 2018, In : Science. 360, 6387, p. 384-385 2 p.

Research output: Contribution to journalComment/debate

Ethics

An interview with Dr Linda C. Giudice

Nowak, R. A., Apr 1 2018, In : Biology of reproduction. 98, 4, p. 437-439 3 p.

Research output: Contribution to journalComment/debate

Interviews

Applying the framework and concepts of parasitology to avian brood parasitism: A comment on Avilés

Abolins-Abols, M. & Hauber, M. E., May 9 2018, In : Behavioral Ecology. 29, 3, p. 520-521 2 p.

Research output: Contribution to journalComment/debate

parasitology
brood parasitism

Correction: Cytosolic delivery of multidomain cargos by the N Terminus of pasteurella multocida toxin (2018) 86:8 (e00248-18) DOI: 10.1128/IAI.00248-18)

Clemons, N. C., Bannai, Y., Haywood, E. E., Xu, Y., Buschbach, J. D., Ho, M. & Wilson, B. A., Aug 1 2018, In : Infection and Immunity. 86, 10, e00596-18.

Research output: Contribution to journalComment/debate

Microbiology
Pasteurella multocida toxin

Correction to: Simulation and Fabrication of Stronger, Larger, and Faster Walking Biohybrid Machines (Advanced Functional Materials, (2018), 28, 23, (1801145), 10.1002/adfm.201801145)

Pagan-Diaz, G. J., Zhang, X., Grant, L., Kim, Y., Aydin, O., Cvetkovic, C., Ko, E., Solomon, E., Hollis, J., Kong, H. J., Saif, M. T. A., Gazzola, M. & Bashir, R., Aug 15 2018, In : Advanced Functional Materials. 28, 33, 1804580.

Research output: Contribution to journalComment/debate

walking machines
Functional materials
lists
Fabrication
fabrication

Erratum: Correction: Influenza A virus hemagglutinin glycosylation compensates for antibody escape fitness costs (PLoS pathogens (2018) 14 1 (e1006796))

Kosik, I., Ince, W. L., Gentles, L. E., Oler, A. J., Kosikova, M., Angel, M., Magadán, J. G., Xie, H., Brooke, C. B. & Yewdell, J. W., Jun 1 2018, In : PLoS pathogens. 14, 6, p. e1007141

Research output: Contribution to journalComment/debate

Influenza A virus
Hemagglutinins
Glycosylation
Costs and Cost Analysis
Antibodies

Erratum: Correction to: A Practical Guide to Molecular Dynamics Simulations of DNA Origami Systems (Methods in molecular biology (Clifton, N.J.))

Yoo, J., Li, C. Y., Slone, S. M., Maffeo, C. & Aksimentiev, A., Jan 1 2018, In : Methods in molecular biology (Clifton, N.J.). 1811, p. E3

Research output: Contribution to journalComment/debate

Molecular Dynamics Simulation
Molecular Biology
Nanotechnology
DNA

Erratum: Hyperglucagonemia Mitigates the Effect of Metformin on Glucose Production in Prediabetes (Cell Reports (2016) 15(7) (1394–1400) (S2211124716304375) (10.1016/j.celrep.2016.04.024))

Konopka, A. R., Esponda, R. R., Robinson, M. M., Johnson, M. L., Carter, R. E., Schiavon, M., Cobelli, C., Wondisford, F. E., Lanza, I. R. & Nair, K. S., May 22 2018, In : Cell Reports. 23, 8, 1 p.

Research output: Contribution to journalComment/debate

Prediabetic State
Metformin
Metabolites
Amino Acids
Glucose

Erratum to: Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L. (Nature Genetics, (2018), 50, 11, (1565-1573), 10.1038/s41588-018-0237-2)

Zhang, J., Zhang, X., Tang, H., Zhang, Q., Hua, X., Ma, X., Zhu, F., Jones, T., Zhu, X., Bowers, J., Wai, C. M., Zheng, C., Shi, Y., Chen, S., Xu, X., Yue, J., Nelson, D. R., Huang, L., Li, Z., Xu, H. & 88 othersZhou, D., Wang, Y., Hu, W., Lin, J., Deng, Y., Pandey, N., Mancini, M., Zerpa, D., Nguyen, J. K., Wang, L., Yu, L., Xin, Y., Ge, L., Arro, J., Han, J. O., Chakrabarty, S., Pushko, M., Zhang, W., Ma, Y., Ma, P., Lv, M., Chen, F., Zheng, G., Xu, J., Yang, Z., Deng, F., Chen, X., Liao, Z., Zhang, X., Lin, Z., Lin, H., Yan, H., Kuang, Z., Zhong, W., Liang, P., Wang, G., Yuan, Y., Shi, J., Hou, J., Lin, J., Jin, J., Cao, P., Shen, Q., Jiang, Q., Zhou, P., Ma, Y., Zhang, X., Xu, R., Liu, J., Zhou, Y., Jia, H., Ma, Q., Qi, R., Zhang, Z., Fang, J., Fang, H., Song, J., Wang, M., Dong, G., Wang, G., Chen, Z., Ma, T., Liu, H., Dhungana, S. R., Huss, S. E., Yang, X., Sharma, A., Trujillo, J. H., Martinez, M. C., Hudson, M., Riascos, J. J., Schuler, M. A., Chen, L., Braun, D. M., Li, L., Yu, Q., Wang, J., Wang, K., Schatz, M. C., Heckerman, D., Van Sluys, M. A., Souza, G. M., Moore, P. H., Sankoff, D., VanBuren, R., Paterson, A. H., Nagai, C. & Ming, R. R., Nov 1 2018, In : Nature Genetics. 50, 12, 1 p.

Research output: Contribution to journalComment/debate

Saccharum
Alleles
Genome
Molecular Sequence Annotation
Databases

Erratum to: Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours (Nature Ecology & Evolution, (2018), 2, 9, (1479-1491), 10.1038/s41559-018-0611-6)

Kukekova, A. V., Johnson, J. L., Xiang, X., Feng, S., Liu, S., Rando, H. M., Kharlamova, A. V., Herbeck, Y., Serdyukova, N. A., Xiong, Z., Beklemischeva, V., Koepfli, K. P., Gulevich, R. G., Vladimirova, A. V., Hekman, J. P., Perelman, P. L., Graphodatsky, A. S., O’Brien, S. J., Wang, X., Clark, A. G. & 3 othersAcland, G. M., Trut, L. N. & Zhang, G., Sep 1 2018, In : Nature Ecology and Evolution. 2, 9, 1 p.

Research output: Contribution to journalComment/debate

genome assembly
Vulpes vulpes
cell biology
aggression
genomics
Hand
Research
Stimulus
Vignettes
Research Methods

Frontiers in alley cropping: Transformative solutions for temperate agriculture

Wolz, K. J., Lovell, S. T., Branham, B. E., Eddy, W. C., Keeley, K., Revord, R. S., Wander, M. M., Yang, W. & Delucia, E. H., Mar 1 2018, In : Global change biology. 24, 3, p. 883-894 12 p.

Research output: Contribution to journalComment/debate

alley cropping
Agriculture
Crops
agriculture
Land use

Going on offense against the gram-negative defense

Drown, B. S. & Hergenrother, P., Jun 26 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 26, p. 6530-6532 3 p.

Research output: Contribution to journalComment/debate

Interview with Maria Cátira Bortolini, Anthropological Geneticist

Bortolini, M. C., Dominguez, V. R. & Malhi, R. S., Jun 1 2018, In : American Anthropologist. 120, 2, p. 343-344 2 p.

Research output: Contribution to journalComment/debate

interview

New horizons for future research – Critical issues to consider for maximizing research excellence and impact

Langhans, W., Adan, R., Arnold, M., Banks, W. A., Card, J. P., Dailey, M. J., Daniels, D., de Kloet, A. D., de Lartigue, G., Dickson, S., Fedele, S., Grill, H. J., Jansson, J. O., Kaufman, S., Kolar, G., Krause, E., Lee, S. J., Le Foll, C., Levin, B. E., Lutz, T. A. & 22 othersMansouri, A., Moran, T. H., Pacheco-López, G., Ramachandran, D., Raybould, H., Rinaman, L., Samson, W. K., Sanchez-Watts, G., Seeley, R. J., Skibicka, K. P., Small, D., Spector, A. C., Tamashiro, K. L., Templeton, B., Trapp, S., Tso, P., Watts, A. G., Weissfeld, N., Williams, D., Wolfrum, C., Yosten, G. & Woods, S. C., Aug 1 2018, In : Molecular Metabolism. 14, p. 53-59 7 p.

Research output: Contribution to journalComment/debate

Research

Teaching behavior is responsive and costly in fairy-wrens though the time course needs to be defined

Kleindorfer, S., Hauber, M. E. & Colombelli-Négrel, DI., Jan 1 2018, In : Behavioral Ecology. 29, 1, p. e3-e4

Research output: Contribution to journalComment/debate

Troglodytidae
teaching

Using human vision to detect variation in avian coloration: How bad is it?

Bergeron, Z. T. & Fuller, B. C., Feb 1 2018, In : American Naturalist. 191, 2, p. 269-276 8 p.

Research output: Contribution to journalComment/debate

reflectance
plumage
color
ecology
animal
2017

A roadmap for improving the representation of photosynthesis in Earth system models

Rogers, A., Medlyn, B. E., Dukes, J. S., Bonan, G., von Caemmerer, S., Dietze, M. C., Kattge, J., Leakey, A., Mercado, L. M., Niinemets, Ü., Prentice, I. C., Serbin, S. P., Sitch, S., Way, D. A. & Zaehle, S., Jan 1 2017, In : New Phytologist. 213, 1, p. 22-42 21 p.

Research output: Contribution to journalComment/debate

Photosynthesis
photosynthesis
Physiological Phenomena
Vapor Pressure
Carbon Cycle

Chaco canyon dig unearths ethical concerns

Claw, K. G., Lippert, D., Bardill, J., Cordova, A., Fox, K., Yracheta, J. M., Bader, A. C., Bolnick, D. A., Malhi, R. S., Tallbear, K. & Garrison, N. A., Jun 1 2017, In : Human Biology. 89, 3, p. 177-180 4 p.

Research output: Contribution to journalComment/debate

canyons
North American Indians
American Indians
canyon
Research

Commentary: History of the ribosome and the origin of translation

Caetano-Anollés, D. & Caetano-Anolles, G., Jan 10 2017, In : Frontiers in Molecular Biosciences. 3, JAN, 87.

Research output: Contribution to journalComment/debate

Ribosomes

Comment on Qu et al. 2016

Robertson, H. M., Jan 1 2017, In : Journal of medical entomology. 54, 1, p. 1-2 2 p.

Research output: Contribution to journalComment/debate

Peer Review
Microfluidics
Embryonic Structures
corrigendum
In Vitro Techniques
Estrogen Receptor
Systems Biology
Molecular Biology
Genomics
Estrogen Receptors

Erratum: "The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species", [Genome Biol. (2016), 17, (192)]

Papanicolaou, A., Schetelig, M. F., Arensburger, P., Atkinson, P. W., Benoit, J. B., Bourtzis, K., Castañera, P., Cavanaugh, J. P., Chao, H., Childers, C., Curril, I., Dinh, H., Doddapaneni, H. V., Dolan, A., Dugan, S., Friedrich, M., Gasperi, G., Geib, S., Georgakilas, G., Gibbs, R. A. & 45 othersGiers, S. D., Gomulski, L. M., González-Guzmán, M., Guillem-Amat, A., Han, Y., Hatzigeorgiou, A. G., Hernández-Crespo, P., Hughes, D. S. T., Jones, J. W., Karagkouni, D., Koskinioti, P., Lee, S. L., Malacrida, A. R., Manni, M., Mathiopoulos, K., Meccariello, A., Munoz-Torres, M., Murali, S. C., Murphy, T. D., Muzny, D. M., Oberhofer, G., Ortego, F., Paraskevopoulou, M. D., Poelchau, M., Qu, J., Reczko, M., Robertson, H. M., Rosendale, A. J., Rosselot, A. E., Saccone, G., Salvemini, M., Savini, G., Schreiner, P., Scolari, F., Siciliano, P., Sim, S. B., Tsiamis, G., Ureña, E., S.Vlachos, I., Werren, J. H., Wimmer, E. A., Worley, K. C., Zacharopoulou, A., Richards, S. & Handler, A. M., Jan 18 2017, In : Genome biology. 18, 1, 11.

Research output: Contribution to journalComment/debate

Ceratitis capitata
Introduced Species
pest species
funding
Publications
Peroxisome Proliferator-Activated Receptors
RNA Polymerase II
Adiponectin
Adipocytes
Cell Biology
Zea mays
Breeding
Genome
Manuscripts
Genes

Erratum: Heme Binding Biguanides Target Cytochrome P450-Dependent Cancer Cell Mitochondria (Cell Chemical Biology (2017) 24(10) (1259–1275.e6) (S2451945617302830)(10.1016/j.chembiol.2017.08.009))

Guo, Z., Sevrioukova, I. F., Denisov, I. G., Zhang, X., Chiu, T. L., Thomas, D. G., Hanse, E. A., Cuellar, R. A. D., Grinkova, Y. V., Langenfeld, V. W., Swedien, D. S., Stamschror, J. D., Alvarez, J., Luna, F., Galván, A., Bae, Y. K., Wulfkuhle, J. D., Gallagher, R. I., Petricoin, E. F., Norris, B. & 17 othersFlory, C. M., Schumacher, R. J., O'Sullivan, M. G., Cao, Q., Chu, H., Lipscomb, J. D., Atkins, W. M., Gupta, K., Kelekar, A., Blair, I. A., Capdevila, J. H., Falck, J. R., Sligar, S. G., Poulos, T. L., Georg, G. I., Ambrose, E. & Potter, D. A., Oct 19 2017, In : Cell chemical biology. 24, 10, 1 p.

Research output: Contribution to journalComment/debate

Biguanides
Mitochondria
Heme
Cytochrome P-450 Enzyme System
Cell Biology
Nonequilibrium Statistical Mechanics
Statistical Physics
statistical mechanics
Turbulence
turbulence

Erratum to: Notomelia and related neural tube defects in a baby born in Niger: case report and literature review (Childs Nerv Syst, (2017), 33, 529–534, 10.1007/s00381-017-3337-x)

Kelani, A., Moumouni, H., Issa, A., Younsaa, H., Fokou, H., Sani, R., Sanoussi, S., Denholm, L., Beever, J. E. & Catala, M., Nov 1 2017, In : Child's Nervous System. 33, 11, 1 p.

Research output: Contribution to journalComment/debate

Niger
Neural Tube Defects
Alleles
Mutation
Population

Erratum to: Screening wild and semi-free ranging great apes for putative sexually transmitted diseases: Evidence of Trichomonadidae infections ((2015), 10.1002/ajp.22442)

Rushmore, J., Allison, A. B., Edwards, E. E., Bagal, U., Altizer, S., Cranfield, M. R., Glenn, T. C., Liu, H., Mudakikwa, A., Mugisha, L., Muller, M. N., Stumpf, R., Thompson, M. E., Wrangham, R. & Yabsley, M. J., Apr 1 2017, In : American journal of primatology. 79, 4, p. 1-2 2 p.

Research output: Contribution to journalComment/debate

sexually transmitted disease
sexually transmitted diseases
Pongidae
urine
screening

Human milk oligosaccharides: Potent weapons in the battle against rotavirus infection

Donovan, S. M., Sep 1 2017, In : Journal of Nutrition. 147, 9, p. 1605-1606 2 p.

Research output: Contribution to journalComment/debate

Rotavirus Infections
Weapons
Human Milk
Oligosaccharides

Multiscale Imaging of HIV-1 Transmission in Humanized Mice

Kieffer, C. D., Ladinsky, M. S. & Bjorkman, P. J., Nov 1 2017, In : AIDS Research and Human Retroviruses. 33, S1, p. S6-S7

Research output: Contribution to journalComment/debate

Electron Microscope Tomography
HIV-1

Pathology in practice

Le Boedec, K., Phillips, H., Zamprogno, H., Joslyn, S., O’Brien, R. T. & Lezmi, S., May 1 2017, In : Journal of the American Veterinary Medical Association. 250, 9, p. 993-995 3 p.

Research output: Contribution to journalComment/debate

Pathology

Reaction: Broad-Spectrum Antibiotics, a Call for Chemists

Richter, M. F. & Hergenrother, P., Jul 13 2017, In : Chem. 3, 1, p. 10-13 4 p.

Research output: Contribution to journalComment/debate

Antibiotics
antibiotics
Anti-Bacterial Agents
Biochemistry
biochemistry

RubisCO and the Search for Biomolecular Culprits of Planetary Change

Caetano-Anolles, G., Nov 1 2017, In : BioEssays. 39, 11, 1700174.

Research output: Contribution to journalComment/debate

Ribulose-Bisphosphate Carboxylase
Plant Proteins
Carbon Dioxide

The natural productome

Palazzolo, A. M. E., Simons, C. L. W. & Burke, M., May 30 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 22, p. 5564-5566 3 p.

Research output: Contribution to journalComment/debate

There is no special sauce: A comment on Beekman and Jordan

Bell, A. M., May 1 2017, In : Behavioral Ecology. 28, 3, p. 626-627 2 p.

Research output: Contribution to journalComment/debate

sauces
Jordan

Trees harness the power of microbes to survive climate change

Lau, J. A., Lennon, J. T. & Heath, K. D., Oct 17 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 42, p. 11009-11011 3 p.

Research output: Contribution to journalComment/debate

Unbroken: RADseq remains a powerful tool for understanding the genetics of adaptation in natural populations

Catchen, J. M., Hohenlohe, P. A., Bernatchez, L., Funk, W. C., Andrews, K. R. & Allendorf, F. W., May 1 2017, In : Molecular ecology resources. 17, 3, p. 362-365 4 p.

Research output: Contribution to journalComment/debate

researchers
Research Personnel
Anecdotes
Genome
Population
Poverty
Base of the pyramid
Subsistence marketplaces
Bottom-up
Government policy

When structure leads to sex: Untangling signals in population genetic data sets

Catchen, J. M., Dec 1 2017, In : Molecular ecology. 26, 24, p. 6763-6766 4 p.

Research output: Contribution to journalComment/debate

Population Genetics
population genetics
recombination
population structure
genomics

Yakety Yak

Berenbaum, M. R., Dec 1 2017, In : American Entomologist. 63, 4, p. 205-207 3 p.

Research output: Contribution to journalComment/debate

yaks
2016

2015 Gabriel W. Lasker Award

Malhi, R. S., Sep 1 2016, In : Human biology. 88, 4, 1 p.

Research output: Contribution to journalComment/debate

honors and awards

A consuming passion for entomophagy

Berenbaum, M. R., Jan 1 2016, In : American Entomologist. 62, 3, p. 140-142 3 p.

Research output: Contribution to journalComment/debate

A Hox-Embedded Long Noncoding RNA: Is It All Hot Air?

Selleri, L., Bartolomei, M. S., Bickmore, W. A., He, L., Stubbs, L. J., Reik, W. & Barsh, G. S., Dec 1 2016, In : PLoS Genetics. 12, 12, e1006485.

Research output: Contribution to journalComment/debate

Long Noncoding RNA
RNA
Air
air
non-coding RNA

Chance the wrapper

Berenbaum, M. R., Dec 1 2016, In : American Entomologist. 62, 4, p. 203-205 3 p.

Research output: Contribution to journalComment/debate

Erythritol
Mycobacterium smegmatis
Metabolic Networks and Pathways
threitol
Nerve Growth Factor
corrigendum

Erratum: Genome of Rhodnius prolixus, an insect vector of Chagas disease, reveals unique adaptations to hematophagy and parasite infection (Proceedings of the National Academy of Sciences of the United States of America (2015) 112 (14936-14941) DOI 10.1073/pnas.1506226112)

Mesquita, R. D., Vionette-Amaral, R. J., Lowenberger, C., Rivera-Pomar, R., Monteiro, F. A., Minx, P., Spieth, J., Carvalho, A. B., Panzera, F., Lawson, D., Torres, A. Q., Ribeiro, J. M. C., Sorgine, M. H. F., Waterhouse, R. M., Montague, M. J., Abad-Franch, F., Alves-Bezerra, M., Amaral, L. R., Araujo, H. M., Araujo, R. N. & 97 othersAravind, L., Atella, G. C., Azambuja, P., Berni, M., Bittencourt-Cunha, P. R., Braz, G. R. C., Calderón-Fernández, G., Carareto, C. M. A., Christensen, M. B., Costa, I. R., Costa, S. G., Dansa, M., Daumas-Filho, C. R. O., De-Paula, I. F., Dias, F. A., Dimopoulos, G., Emrich, S. J., Esponda-Behrens, N., Fampa, P., Fernandez-Medina, R. D., Da Fonseca, R. N., Fontenele, M., Fronick, C., Fulton, L. A., Gandara, A. C., Garcia, E. S., Genta, F. A., Giraldo-Calderón, G. I., Gomes, B., Gondim, K. C., Granzotto, A., Guarneri, A. A., Guigó, R., Harry, M., Hughes, D. S. T., Jablonka, W., Jacquin-Joly, E., Juárez, M. P., Koerich, L. B., Lange, A. B., Latorre-Estivalis, J. M., Lavore, A., Lawrence, G. G., Lazoski, C., Lazzari, C. R., Lopes, R. R., Lorenzo, M. G., Lugon, M. D., Majerowicz, D., Marcet, P. L., Mariotti, M., Masuda, H., Megy, K., Melo, A. C. A., Missirlis, F., Mota, T., Noriega, F. G., Nouzova, M., Nunes, R. D., Oliveir, R. L. L., Oliveira-Silveira, G., Ons, S., Orchard, I., Pagola, L., Paiva-Silva, G. O., Pascual, A., Pavan, M. G., Pedrini, N., Peixoto, A. A., Pereira, M. H., Pike, A., Polycarpo, C., Prosdocimi, F., Ribeiro-Rodrigues, R., Robertson, H. M., Salerno, A. P., Salmon, D., Santesmasses, D., Schama, R., Seabra, E. S., Silva-Cardoso, L., Silva-Neto, M. A. C., Souza-Gomes, M., Sterkel, M., Taracena, M. L., Tojo, M., Tu, Z. J., Tubio, J. M. C., Ursic-Bedoya, R., Venancio, T. M., Walter-Nuno, A. B., Wilson, D., Warren, W. C., Wilson, R. K., Huebner, E., Dotson, E. M. & Oliveira, P. L., Mar 8 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 10, p. E1415-E1416

Research output: Contribution to journalComment/debate