Research Output 1972 2019

Filter
Article
2019

13C-lutein is differentially distributed in tissues of an adult female rhesus macaque following a single oral administration: a pilot study

Jeon, S., Li, Q., Rubakhin, S., Sweedler, J. V., Smith, J. W., Neuringer, M., Kuchan, M. & Erdman, J. W., Jan 1 2019, In : Nutrition Research. 61, p. 102-108 7 p.

Research output: Contribution to journalArticle

Lutein
Macaca mulatta
Oral Administration
Tissue Distribution
Haplorhini

A Comparative Analysis of Anthropogenic CO2 Emissions at City Level Using OCO-2 Observations: A Global Perspective

Fu, P., Xie, Y., Moore, C. E., Myint, S. W. & Bernacchi, C., Jan 1 2019, (Accepted/In press) In : Earth's Future.

Research output: Contribution to journalArticle

Open Access
global perspective
fossil fuel
seasonality
vegetation
carbon

A computational model of feedback-mediated hematopoietic stem cell differentiation in vitro

Mahadik, B., Hannon, B. & Harley, B. A., Mar 1 2019, In : PloS one. 14, 3, e0212502.

Research output: Contribution to journalArticle

Open Access
Hematopoietic Stem Cells
Stem cells
cell differentiation
Cell Differentiation
Feedback

A Confocal Reflection Super-Resolution Technique to Image Golgi-Cox Stained Neurons

Sivaguru, M., Khaw, Y. M. & Inoue, M., Aug 1 2019, In : Journal of Microscopy. 275, 2, p. 115-130 16 p.

Research output: Contribution to journalArticle

Staining and Labeling
Neurons
Light
Dendritic Spines
Central Nervous System Diseases
glucokinase
Glucokinase
Anthocyanins
Medical problems
phenolic acids

Activation of silent biosynthetic gene clusters using transcription factor decoys

Wang, B., Guo, F., Dong, S. H. & Zhao, H., Feb 1 2019, In : Nature chemical biology. 15, 2, p. 111-114 4 p.

Research output: Contribution to journalArticle

Multigene Family
Transcription Factors
Oxazoles
Peptide Synthases
Polyketide Synthases

Active feminization of the preoptic area occurs independently of the gonads in Amphiprion ocellaris

Dodd, L. D., Nowak, E., Lange, D., Parker, C. G., DeAngelis, R., Gonzalez, J. A. & Rhodes, J. S., Jun 1 2019, In : Hormones and Behavior. 112, p. 65-76 12 p.

Research output: Contribution to journalArticle

Feminization
Preoptic Area
Gonads
Steroids
Sexual Development
Ciprofloxacin
Escherichia coli
antibiotic resistance
Microfluidics
experiment

A direct effect of the autonomic nervous system on somatic stem cell proliferation?

Davis, E. A. & Dailey, M. J., Jan 1 2019, In : American Journal of Physiology - Regulatory Integrative and Comparative Physiology. 316, 1, p. R1-R5

Research output: Contribution to journalArticle

Adult Stem Cells
Autonomic Nervous System
Cell Proliferation
Stem Cells
Epithelial Cells

Adolescent impulsivity as a sex-dependent and subtype-dependent predictor of impulsivity, alcohol drinking and dopamine D 2 receptor expression in adult rats

Hammerslag, L. R., Belagodu, A. P., Aladesuyi Arogundade, O. A., Karountzos, A. G., Guo, Q., Galvez, R., Roberts, B. W. & Gulley, J. M., Mar 1 2019, In : Addiction Biology. 24, 2, p. 193-205 13 p.

Research output: Contribution to journalArticle

Impulsive Behavior
Alcohol Drinking
Dopamine
Substance-Related Disorders
Saccharin

Adopting bioenergy crops: Does farmers’ attitude toward loss matter?

Anand, M., Miao, R. & Khanna, M., Jul 1 2019, In : Agricultural Economics (United Kingdom). 50, 4, p. 435-450 16 p.

Research output: Contribution to journalArticle

farmers' attitudes
energy crops
Miscanthus
Panicum virgatum
farmers

Agbots: Weeding a field with a team of autonomous robots

McAllister, W., Osipychev, D., Davis, A. & Chowdhary, G., Aug 1 2019, In : Computers and Electronics in Agriculture. 163, 104827.

Research output: Contribution to journalArticle

Open Access
robots
weed
weed control
seed bank
Robots

A gelatin hydrogel to study endometrial angiogenesis and trophoblast invasion

Zambuto, S. G., Clancy, K. B. H. & Harley, B. A., Oct 6 2019, In : Interface Focus. 9, 5, 20190016.

Research output: Contribution to journalArticle

Hydrogel
Endothelial cells
Trophoblasts
Gelatin
Hydrogels

A gene cluster for taurine sulfur assimilation in an anaerobic human gut bacterium

Xing, M., Wei, Y., Hua, G., Li, M., Nanjaraj Urs, A. N., Wang, F., Hu, Y., Zhai, W., Liu, Y., Ang, E. L., Zhao, H. & Zhang, Y., Aug 15 2019, In : Biochemical Journal. 476, 15, p. 2271-2279 9 p.

Research output: Contribution to journalArticle

Taurine
Multigene Family
Sulfur
Bacteria
Genes

A hybrid de novo genome assembly of the honeybee, Apis mellifera, with chromosome-length scaffolds

Wallberg, A., Bunikis, I., Pettersson, O. V., Mosbech, M. B., Childers, A. K., Evans, J. D., Mikheyev, A. S., Robertson, H. M., Robinson, G. E. & Webster, M. T., Apr 8 2019, In : BMC genomics. 20, 1, 275.

Research output: Contribution to journalArticle

Open Access
Bees
Chromosomes
Chromosome Mapping
Genome
Genomic Structural Variation

Ammonia flux measurements above a corn canopy using relaxed eddy accumulation and a flux gradient system

Nelson, A. J., Lichiheb, N., Koloutsou-Vakakis, S., Rood, M. J., Heuer, M., Myles, L. T., Joo, E., Miller, J. & Bernacchi, C., Jan 15 2019, In : Agricultural and Forest Meteorology. 264, p. 104-113 10 p.

Research output: Contribution to journalArticle

flux measurement
eddy
ammonia
maize
canopy

Analysis of Paper-Based Colorimetric Assays with a Smartphone Spectrometer

Woodburn, E. V., Long, K. D. & Cunningham, B. T., Jan 15 2019, In : IEEE Sensors Journal. 19, 2, p. 508-514 7 p., 8494768.

Research output: Contribution to journalArticle

Smartphones
Spectrometers
Assays
strip
Cameras

Ancient DNA analysis of a nineteenth century tobacco pipe from a Maryland slave quarter

Schablitsky, J. M., Witt, K. E., Madrigal, J. R., Ellegaard, M. R., Malhi, R. S. & Schroeder, H., May 1 2019, In : Journal of Archaeological Science. 105, p. 11-18 8 p.

Research output: Contribution to journalArticle

genetic test
slave
nicotine
artifact
nineteenth century

Ancient DNA reveals a multistep spread of the first herders into sub-Saharan Africa

Prendergast, M. E., Lipson, M., Sawchuk, E. A., Olalde, I., Ogola, C. A., Rohland, N., Sirak, K. A., Adamski, N., Bernardos, R., Broomandkhoshbacht, N., Callan, K., Culleton, B. J., Eccles, L., Harper, T. K., Lawson, A. M., Mah, M., Oppenheimer, J., Stewardson, K., Zalzala, F., Ambrose, S. H. & 13 others, Ayodo, G., Gates, H. L., Gidna, A. O., Katongo, M., Kwekason, A., Mabulla, A. Z. P., Mudenda, G. S., Ndiema, E. K., Nelson, C., Robertshaw, P., Kennett, D. J., Manthi, F. K. & Reich, D., Jul 5 2019, In : Science. 365, 6448, eaaw6275.

Research output: Contribution to journalArticle

Iron Age
DNA
Stone Age
food production
genetic differentiation

An evaluation of primers for detecting denitrifiers via their functional genes

Ma, Y., Zilles, J. & Kent, A. D., Apr 1 2019, In : Environmental Microbiology. 21, 4, p. 1196-1210 15 p.

Research output: Contribution to journalArticle

Denitrification
denitrification
Ecology
functional group
gene

An Exploratory Look at the Role of Childcare Providers as a Support and Resource for Breastfeeding Mothers

Lundquist, A., McBride, B. A., Donovan, S. M. & Kieffer, A., Jun 1 2019, In : Breastfeeding Medicine. 14, 5, p. 313-319 7 p.

Research output: Contribution to journalArticle

Breast Feeding
Mothers
Education
Foster Home Care
Mental Competency

An extended regulatory landscape drives Tbx18 activity in a variety of prostate-associated cell lineages

Negi, S., Bolt, C. C., Zhang, H. & Stubbs, L. J., Feb 15 2019, In : Developmental Biology. 446, 2, p. 180-192 13 p.

Research output: Contribution to journalArticle

Cell Lineage
Chromatin
Prostate
Essential Genes
Ureter

A NIR Light Gated DNA Nanodevice for Spatiotemporally Controlled Imaging of MicroRNA in Cells and Animals

Zhao, J., Chu, H., Zhao, Y., Lu, Y. & Li, L., May 1 2019, In : Journal of the American Chemical Society. 141, 17, p. 7056-7062 7 p.

Research output: Contribution to journalArticle

MicroRNAs
Animals
DNA
Imaging techniques
Light

A novel synthesis of trans-unsaturated fatty acids by the Gram-positive commensal bacterium Enterococcus faecalis FA2-2

Kondakova, T., Kumar, S. & Cronan, J. E., Aug 1 2019, In : Chemistry and Physics of Lipids. 222, p. 23-35 13 p.

Research output: Contribution to journalArticle

Trans Fatty Acids
Enterococcus faecalis
Gram-Positive Bacteria
Unsaturated Fatty Acids
Bacteria

Antarctic blackfin icefish genome reveals adaptations to extreme environments

Kim, B. M., Amores, A., Kang, S., Ahn, D. H., Kim, J. H., Kim, I. C., Lee, J. H., Lee, S. G., Lee, H., Lee, J., Kim, H. W., Desvignes, T., Batzel, P., Sydes, J., Titus, T., Wilson, C. A., Catchen, J. M., Warren, W. C., Schartl, M., Detrich, H. W. & 2 others, Postlethwait, J. H. & Park, H., Mar 1 2019, In : Nature Ecology and Evolution. 3, 3, p. 469-478 10 p.

Research output: Contribution to journalArticle

genome
gene
genes
ice damage
biological rhythm

Anti-parasitic egg rejection by great reed warblers (Acrocephalus arundinaceus) tracks differences along an eggshell color gradient

Abolins-Abols, M., Hanley, D., Moskát, C., Grim, T. & Hauber, M. E., Sep 1 2019, In : Behavioural Processes. 166, 103902.

Research output: Contribution to journalArticle

Egg Shell
Songbirds
egg shell
Eggs
Ovum

A pathway for isethionate dissimilation in Bacillus krulwichiae

Tong, Y., Wei, Y., Hu, Y., Ang, E. L., Zhao, H. & Zhang, Y., Jan 1 2019, In : Applied and environmental microbiology. 85, 15, e00793-19.

Research output: Contribution to journalArticle

Bacillus (bacteria)
Bacillus
Bacteria
bacterium
bacteria

A physical model-based method for retrieving urban land surface temperatures under cloudy conditions

Fu, P., Xie, Y., Weng, Q., Myint, S., Meacham-Hensold, K. & Bernacchi, C., Sep 1 2019, In : Remote Sensing of Environment. 230, 111191.

Research output: Contribution to journalArticle

physical models
surface temperature
land surface
Mean square error
Temperature

Applications of a class of Herglotz operator pencils

Barreiro, A. K., Bronski, J. C. & Rapti, Z., Jan 1 2019, In : SIAM Journal on Mathematical Analysis. 51, 1, p. 256-275 20 p.

Research output: Contribution to journalArticle

Operator Pencil
Eigenvalue
Eigenvalues and eigenfunctions
Oscillation
Accumulation point
Vehicle suspensions
Systems engineering
Dynamic models

Are we approaching a water ceiling to maize yields in the United States?

Delucia, E. H., Chen, S., Guan, K., Peng, B., Li, Y., Gomez-Casanovas, N., Kantola, I. B., Bernacchi, C., Huang, Y., Long, S. P. & Ort, D. R., Jun 18 2019, In : Ecosphere. 10, 6, e02773.

Research output: Contribution to journalArticle

Open Access
maize
corn
vapor pressure
water
water use efficiency

Asian international student and asian American student: Mistaken identity and racial microaggressions

Yeo, H. J. T., Mendenhall, R., Harwood, S. A. & Huntt, M. B., Jan 1 2019, In : Journal of International Students. 9, 1, p. 39-65 27 p.

Research output: Contribution to journalArticle

Open Access
student
xenophobia
experience
nationality
racism

Assembly of allele-aware, chromosomal-scale autopolyploid genomes based on Hi-C data

Zhang, X., Zhang, S., Zhao, Q., Ming, R. R. & Tang, H., Aug 1 2019, In : Nature Plants. 5, 8, p. 833-845 13 p.

Research output: Contribution to journalArticle

autopolyploidy
alleles
genome
chromosomes
diploidy

Assessing the Flexibility of the Prochlorosin 2.8 Scaffold for Bioengineering Applications

Hegemann, J. D., Bobeica, S. C., Walker, M. C., Bothwell, I. R. & van der Donk, W. A., May 17 2019, In : ACS synthetic biology. 8, 5, p. 1204-1214 11 p.

Research output: Contribution to journalArticle

Bioengineering
Scaffolds
Peptides
Epitopes
Cyclization

Assessing the Impact of Mindfulness and Life Stress on Maternal Well-Being

Khan, F. & Laurent, H. K., Jan 1 2019, In : Mindfulness. 10, 1, p. 26-35 10 p.

Research output: Contribution to journalArticle

Mindfulness
Psychological Stress
well-being
Mothers
anxiety

Associations among diet, the gastrointestinal microbiota, and negative emotional states in adults

Taylor, A. M., Thompson, S. V., Edwards, C. G., Musaad, S. M. A., Khan, N. A. & Holscher, H. D., Jan 1 2019, In : Nutritional Neuroscience.

Research output: Contribution to journalArticle

Diet
Mood Disorders
Depression
Anxiety
Bifidobacterium

A subsidiary cell-localized glucose transporter promotes stomatal conductance and photosynthesis

Wang, H., Yan, S., Xin, H., Huang, W., Zhang, H., Teng, S., Yu, Y. C., Fernie, A. R., Lu, X., Li, P., Li, S., Zhang, C., Ruan, Y. L., Chen, L. & Langa, Z., Jun 1 2019, In : Plant Cell. 31, 6, p. 1328-1343 16 p.

Research output: Contribution to journalArticle

glucose transporters
Facilitative Glucose Transport Proteins
Photosynthesis
stomatal conductance
Clustered Regularly Interspaced Short Palindromic Repeats

A subtype of oral, laryngeal, esophageal, and lung, squamous cell carcinoma with high levels of TrkB-T1 neurotrophin receptor mRNA

Zhou, Y., Sinha, S., Schwartz, J. L. & Adami, G. R., Jun 20 2019, In : BMC Cancer. 19, 1, 607.

Research output: Contribution to journalArticle

Open Access
Nerve Growth Factor Receptors
Squamous Cell Carcinoma
Lung
Messenger RNA
Neoplasms

A tetrahedral molecular cage with a responsive vertex

Pattillo, C. C. & Moore, J. S., Jan 1 2019, In : Chemical Science. 10, 29, p. 7043-7048 6 p.

Research output: Contribution to journalArticle

Open Access
Imines
Alkynes
Self assembly

Automated sensorless single-shot closed-loop adaptive optics microscopy with feedback from computational adaptive optics

Iyer, R. R., Liu, Y. Z. & Boppart, S. A., Apr 29 2019, In : Optics Express. 27, 9, p. 12998-13014 17 p.

Research output: Contribution to journalArticle

adaptive optics
shot
microscopy
deformable mirrors
aberration

Axial shielding of Pd(II) complexes enables perfect stereoretention in Suzuki-Miyaura cross-coupling of Csp 3 boronic acids

Lehmann, J. W., Crouch, I. T., Blair, D. J., Trobe, M., Wang, P., Li, J. & Burke, M., Dec 1 2019, In : Nature communications. 10, 1, 1263.

Research output: Contribution to journalArticle

Open Access
Boronic Acids
cross coupling
Shielding
shielding
acids

A year in the life of a giant ground sloth during the Last Glacial Maximum in Belize

Larmon, J. T., Mcdonald, H. G., Ambrose, S., Desantis, L. R. G. & Lucero, L. J., Feb 1 2019, In : Science Advances. 5, 2, eaau1200.

Research output: Contribution to journalArticle

Open Access
Last Glacial Maximum
tooth
stable isotope
chemical alteration
fossilization

Bacterial Cyclopropane Fatty Acid Synthase mRNA Is Targeted by Activating and Repressing Small RNAs

Bianco, C. M., Fröhlich, K. S. & Vanderpool, C., Oct 1 2019, In : Journal of bacteriology. 201, 19

Research output: Contribution to journalArticle

Open Access
RNA
Messenger RNA
Membrane Lipids
5' Untranslated Regions
Acids

Bagging and deep learning in optimal individualized treatment rules

Mi, X., Zou, F. & Zhu, R., Jan 1 2019, In : Biometrics. 75, 2, p. 674-684 11 p.

Research output: Contribution to journalArticle

Bagging
learning
Learning
Decision Rules
neural networks

Bayesian model selection for high-dimensional data

Narisetty, N., Jan 1 2019, (Accepted/In press) In : Handbook of Statistics.

Research output: Contribution to journalArticle

Bayesian Model Selection
High-dimensional Data
Model Selection
Covariates
High-dimensional

Bayesian Regularization for Graphical Models With Unequal Shrinkage

Gan, L., Narisetty, N. & Liang, F., Jul 3 2019, In : Journal of the American Statistical Association. 114, 527, p. 1218-1231 14 p.

Research output: Contribution to journalArticle

Maximum a Posteriori
Graphical Models
Shrinkage
Unequal
Regularization

Behavioral response to fiber feedingis cohort-dependent and associated with gut microbiota composition in mice

Mailing, L. J., Allen, J. M., Pence, B. D., Rytych, J., Sun, Y., Bhattacharya, T. K., Park, P., Cross, T. W. L., McCusker, R. H., Swanson, K. S., Fahey, G. C., Rhodes, J. S., Kelley, K. W., Johnson, R. W. & Woods, J. A., Feb 1 2019, In : Behavioural Brain Research. 359, p. 731-736 6 p.

Research output: Contribution to journalArticle

Cellulose
Microbiota
Learning
Bilophila
Aptitude

Bimodal habitat use in brood parasitic Common Cuckoos (Cuculus canorus) revealed by GPS telemetry

Moskát, C., Bán, M., Fülöp, A., Bereczki, J. & Hauber, M. E., Apr 16 2019, In : Auk. 136, 2, uky019.

Research output: Contribution to journalArticle

Open Access
Cuculus canorus
Cuculidae
global positioning systems
telemetry
home range

Biochemical and structural investigation of sulfoacetaldehyde reductase from Klebsiella oxytoca

Zhou, Y., Wei, Y., Lin, L., Xu, T., Ang, E. L., Zhao, H., Yuchi, Z. & Zhang, Y., Jan 1 2019, In : Biochemical Journal. 476, 4, p. 733-746 14 p.

Research output: Contribution to journalArticle

Klebsiella oxytoca
Oxidoreductases
Taurine
NADP
Tail

Biochemical and structural investigation of taurine:2-oxoglutarate aminotransferase from Bifidobacterium kashiwanohense

Li, M., Wei, Y., Yin, J., Lin, L., Zhou, Y., Hua, G., Cao, P., Ang, E. L., Zhao, H., Yuchi, Z. & Zhang, Y., Jan 1 2019, In : Biochemical Journal. 476, 11, p. 1605-1619 15 p.

Research output: Contribution to journalArticle

Bifidobacterium
Taurine
Pyridoxal
Transaminases
Pyridoxal Phosphate