Research Output 1972 2019

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2019

13C-lutein is differentially distributed in tissues of an adult female rhesus macaque following a single oral administration: a pilot study

Jeon, S., Li, Q., Rubakhin, S., Sweedler, J. V., Smith, J. W., Neuringer, M., Kuchan, M. & Erdman, J. W., Jan 1 2019, In : Nutrition Research. 61, p. 102-108 7 p.

Research output: Contribution to journalArticle

Lutein
Macaca mulatta
Oral Administration
Tissue Distribution
Haplorhini

Activation of silent biosynthetic gene clusters using transcription factor decoys

Wang, B., Guo, F., Dong, S. H. & Zhao, H., Feb 1 2019, In : Nature chemical biology. 15, 2, p. 111-114 4 p.

Research output: Contribution to journalArticle

Multigene Family
Transcription Factors
Oxazoles
Peptide Synthases
Polyketide Synthases

Active feminization of the preoptic area occurs independently of the gonads in Amphiprion ocellaris

Dodd, L. D., Nowak, E., Lange, D., Parker, C. G., DeAngelis, R., Gonzalez, J. A. & Rhodes, J. S., Jun 1 2019, In : Hormones and Behavior. 112, p. 65-76 12 p.

Research output: Contribution to journalArticle

Feminization
Preoptic Area
Gonads
Steroids
Sexual Development

A direct effect of the autonomic nervous system on somatic stem cell proliferation?

Davis, E. A. & Dailey, M. J., Jan 1 2019, In : American Journal of Physiology - Regulatory Integrative and Comparative Physiology. 316, 1, p. R1-R5

Research output: Contribution to journalArticle

Adult Stem Cells
Autonomic Nervous System
Cell Proliferation
Stem Cells
Epithelial Cells

Adolescent impulsivity as a sex-dependent and subtype-dependent predictor of impulsivity, alcohol drinking and dopamine D 2 receptor expression in adult rats

Hammerslag, L. R., Belagodu, A. P., Aladesuyi Arogundade, O. A., Karountzos, A. G., Guo, Q., Galvez, R., Roberts, B. W. & Gulley, J. M., Mar 1 2019, In : Addiction Biology. 24, 2, p. 193-205 13 p.

Research output: Contribution to journalArticle

Impulsive Behavior
Alcohol Drinking
Dopamine
Substance-Related Disorders
Saccharin

Adopting bioenergy crops: Does farmers’ attitude toward loss matter?

Anand, M., Miao, R. & Khanna, M., Jan 1 2019, In : Agricultural Economics (United Kingdom).

Research output: Contribution to journalArticle

crop insurance
farmers' attitudes
Miscanthus
Panicum virgatum
energy crops

Agbots: Weeding a field with a team of autonomous robots

McAllister, W., Osipychev, D., Davis, A. & Chowdhary, G., Aug 1 2019, In : Computers and Electronics in Agriculture. 163, 104827.

Research output: Contribution to journalArticle

Open Access

A hybrid de novo genome assembly of the honeybee, Apis mellifera, with chromosome-length scaffolds

Wallberg, A., Bunikis, I., Pettersson, O. V., Mosbech, M. B., Childers, A. K., Evans, J. D., Mikheyev, A. S., Robertson, H. M., Robinson, G. E. & Webster, M. T., Apr 8 2019, In : BMC genomics. 20, 1, 275.

Research output: Contribution to journalArticle

Open Access
Bees
Chromosomes
Chromosome Mapping
Genome
Genomic Structural Variation

Ammonia flux measurements above a corn canopy using relaxed eddy accumulation and a flux gradient system

Nelson, A. J., Lichiheb, N., Koloutsou-Vakakis, S., Rood, M. J., Heuer, M., Myles, L. T., Joo, E., Miller, J. & Bernacchi, C., Jan 15 2019, In : Agricultural and Forest Meteorology. 264, p. 104-113 10 p.

Research output: Contribution to journalArticle

flux measurement
eddy
ammonia
maize
canopy

Analysis of Paper-Based Colorimetric Assays with a Smartphone Spectrometer

Woodburn, E. V., Long, K. D. & Cunningham, B. T., Jan 15 2019, In : IEEE Sensors Journal. 19, 2, p. 508-514 7 p., 8494768.

Research output: Contribution to journalArticle

Smartphones
Spectrometers
Assays
strip
Cameras

Ancient DNA analysis of a nineteenth century tobacco pipe from a Maryland slave quarter

Schablitsky, J. M., Witt, K. E., Madrigal, J. R., Ellegaard, M. R., Malhi, R. S. & Schroeder, H., May 1 2019, In : Journal of Archaeological Science. 105, p. 11-18 8 p.

Research output: Contribution to journalArticle

genetic test
slave
nicotine
artifact
nineteenth century

An evaluation of primers for detecting denitrifiers via their functional genes

Ma, Y., Zilles, J. & Kent, A. D., Apr 1 2019, In : Environmental Microbiology. 21, 4, p. 1196-1210 15 p.

Research output: Contribution to journalArticle

Denitrification
denitrification
Ecology
functional group
gene

An Exploratory Look at the Role of Childcare Providers as a Support and Resource for Breastfeeding Mothers

Lundquist, A., McBride, B. A., Donovan, S. M. & Kieffer, A., Jun 1 2019, In : Breastfeeding Medicine. 14, 5, p. 313-319 7 p.

Research output: Contribution to journalArticle

Breast Feeding
Mothers
Education
Foster Home Care
Mental Competency

An extended regulatory landscape drives Tbx18 activity in a variety of prostate-associated cell lineages

Negi, S., Bolt, C. C., Zhang, H. & Stubbs, L. J., Feb 15 2019, In : Developmental Biology. 446, 2, p. 180-192 13 p.

Research output: Contribution to journalArticle

Cell Lineage
Chromatin
Prostate
Essential Genes
Ureter

A novel synthesis of trans-unsaturated fatty acids by the Gram-positive commensal bacterium Enterococcus faecalis FA2-2

Kondakova, T., Kumar, S. & Cronan, J. E., Aug 1 2019, In : Chemistry and Physics of Lipids. 222, p. 23-35 13 p.

Research output: Contribution to journalArticle

Trans Fatty Acids
Enterococcus faecalis
Gram-Positive Bacteria
Unsaturated Fatty Acids
Bacteria

Antarctic blackfin icefish genome reveals adaptations to extreme environments

Kim, B. M., Amores, A., Kang, S., Ahn, D. H., Kim, J. H., Kim, I. C., Lee, J. H., Lee, S. G., Lee, H., Lee, J., Kim, H. W., Desvignes, T., Batzel, P., Sydes, J., Titus, T., Wilson, C. A., Catchen, J. M., Warren, W. C., Schartl, M., Detrich, H. W. & 2 othersPostlethwait, J. H. & Park, H., Mar 1 2019, In : Nature Ecology and Evolution. 3, 3, p. 469-478 10 p.

Research output: Contribution to journalArticle

genome
gene
genes
ice damage
biological rhythm

A physical model-based method for retrieving urban land surface temperatures under cloudy conditions

Fu, P., Xie, Y., Weng, Q., Myint, S., Meacham-Hensold, K. & Bernacchi, C., Sep 1 2019, In : Remote Sensing of Environment. 230, 111191.

Research output: Contribution to journalArticle

physical models
surface temperature
land surface
Mean square error
Temperature

Applications of a class of Herglotz operator pencils

Barreiro, A. K., Bronski, J. C. & Rapti, Z., Jan 1 2019, In : SIAM Journal on Mathematical Analysis. 51, 1, p. 256-275 20 p.

Research output: Contribution to journalArticle

Operator Pencil
Eigenvalue
Eigenvalues and eigenfunctions
Oscillation
Accumulation point
Vehicle suspensions
Systems engineering
Dynamic models

Are we approaching a water ceiling to maize yields in the United States?

Delucia, E. H., Chen, S., Guan, K., Peng, B., Li, Y., Gomez-casanovas, N., Kantola, I. B., Bernacchi, C. J., Huang, Y., Long, S. P. & Ort, D. R., Jun 18 2019, In : Ecosphere. 10, 6, e02773.

Research output: Contribution to journalArticle

Open Access
maize
corn
vapor pressure
water
water use efficiency

Assessing safe food handling knowledge and practices of food service managers in Doha, Qatar

Asim, H. S., Elnemr, I., Goktepe, I., Feng, H., Park, H. K., Alzeyara, S., AlHajri, M. & Kushad, M. M., Jul 1 2019, In : Food Science and Technology International. 25, 5, p. 440-448 9 p.

Research output: Contribution to journalArticle

Qatar
Food Services
food handling
Food Handling
food service

Assessing the Flexibility of the Prochlorosin 2.8 Scaffold for Bioengineering Applications

Hegemann, J. D., Bobeica, S. C., Walker, M. C., Bothwell, I. R. & van der Donk, W. A., May 17 2019, In : ACS synthetic biology. 8, 5, p. 1204-1214 11 p.

Research output: Contribution to journalArticle

Bioengineering
Scaffolds
Peptides
Epitopes
Cyclization

Assessing the Impact of Mindfulness and Life Stress on Maternal Well-Being

Khan, F. & Laurent, H. K., Jan 1 2019, In : Mindfulness. 10, 1, p. 26-35 10 p.

Research output: Contribution to journalArticle

Mindfulness
Psychological Stress
well-being
Mothers
anxiety

Associations among diet, the gastrointestinal microbiota, and negative emotional states in adults

Taylor, A. M., Thompson, S. V., Edwards, C. G., Musaad, S. M. A., Khan, N. A. & Holscher, H. D., Jan 1 2019, In : Nutritional Neuroscience.

Research output: Contribution to journalArticle

Diet
Mood Disorders
Depression
Anxiety
Bifidobacterium

Automated sensorless single-shot closed-loop adaptive optics microscopy with feedback from computational adaptive optics

Iyer, R. R., Liu, Y. Z. & Boppart, S. A., Apr 29 2019, In : Optics Express. 27, 9, p. 12998-13014 17 p.

Research output: Contribution to journalArticle

adaptive optics
shot
microscopy
deformable mirrors
aberration

Axial shielding of Pd(II) complexes enables perfect stereoretention in Suzuki-Miyaura cross-coupling of Csp 3 boronic acids

Lehmann, J. W., Crouch, I. T., Blair, D. J., Trobe, M., Wang, P., Li, J. & Burke, M., Dec 1 2019, In : Nature communications. 10, 1, 1263.

Research output: Contribution to journalArticle

Open Access
Boronic Acids
cross coupling
Shielding
shielding
acids

Bagging and deep learning in optimal individualized treatment rules

Mi, X., Zou, F. & Zhu, R., Jan 1 2019, In : Biometrics.

Research output: Contribution to journalArticle

Bagging
learning
Learning
Decision Rules
neural networks

Behavioral response to fiber feedingis cohort-dependent and associated with gut microbiota composition in mice

Mailing, L. J., Allen, J. M., Pence, B. D., Rytych, J., Sun, Y., Bhattacharya, T. K., Park, P., Cross, T. W. L., McCusker, R. H., Swanson, K. S., Fahey, G. C., Rhodes, J. S., Kelley, K. W., Johnson, R. W. & Woods, J. A., Feb 1 2019, In : Behavioural Brain Research. 359, p. 731-736 6 p.

Research output: Contribution to journalArticle

Cellulose
Microbiota
Learning
Bilophila
Aptitude

Biochemical and structural investigation of sulfoacetaldehyde reductase from Klebsiella oxytoca

Zhou, Y., Wei, Y., Lin, L., Xu, T., Ang, E. L., Zhao, H., Yuchi, Z. & Zhang, Y., Jan 1 2019, In : Biochemical Journal. 476, 4, p. 733-746 14 p.

Research output: Contribution to journalArticle

Klebsiella oxytoca
Oxidoreductases
Taurine
NADP
Tail

Biochemical characterization of the methylmercaptopropionate: Cob(I)alamin Methyltransferase from Methanosarcina acetivorans

Fu, H., Goettge, M. N. & Metcalf, W. W., Jan 1 2019, In : Journal of bacteriology. 201, 12, e00130-19.

Research output: Contribution to journalArticle

Methanosarcina
Corrinoids
Methyltransferases
Proteins
Methylation

Biohybrid valveless pump-bot powered by engineered skeletal muscle

Li, Z., Seo, Y., Aydin, O., Elhebeary, M., Kamm, R. D., Kong, H. J. & Taher Saif, M. A., Jan 29 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 5, p. 1543-1548 6 p.

Research output: Contribution to journalArticle

Hydrogel
Skeletal Muscle
Muscles
Microfluidics
Muscle Contraction

Biomass yield in a genetically diverse Miscanthus sinensis germplasm panel evaluated at five locations revealed individuals with exceptional potential

Clark, L. V., Dwiyanti, M. S., Anzoua, K. G., Brummer, J. E., Ghimire, B. K., Głowacka, K., Hall, M., Heo, K., Jin, X., Lipka, A. E., Peng, J., Yamada, T., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Jan 1 2019, In : GCB Bioenergy.

Research output: Contribution to journalArticle

Open Access
Miscanthus giganteus
Miscanthus sinensis
germplasm
Biomass
biomass
Yeast
yeast
ethanol
Ethanol
maize

Biosynthesis and Chemical Applications of Thioamides

Mahanta, N., Szantai-Kis, D. M., Petersson, E. J. & Mitchell, D. A., Jan 1 2019, In : ACS chemical biology.

Research output: Contribution to journalArticle

Thioamides
Biosynthesis
Biological Products
Cytology
Peptides

Biosynthesis of the RiPP trojan horse nucleotide antibiotic microcin C is directed by the N-formyl of the peptide precursor

Dong, S. H., Kulikovsky, A., Zukher, I., Estrada, P., Dubiley, S., Severinov, K. & Nair, S. K., Jan 1 2019, In : Chemical Science. 10, 8, p. 2391-2395 5 p.

Research output: Contribution to journalArticle

Open Access
Biosynthesis
Nucleotides
Anti-Bacterial Agents
Peptides
Ubiquitin-Activating Enzymes

Biosynthetic Routes for Producing Various Fucosyl-Oligosaccharides

Yun, E. J., Liu, J. J., Lee, J. W., Kwak, S., Yu, S., Kim, K. H. & Jin, Y-S., Feb 15 2019, In : ACS synthetic biology. 8, 2, p. 415-424 10 p.

Research output: Contribution to journalArticle

Oligosaccharides
Fucose
Guanosine Diphosphate Fucose
Prebiotics
Sugars

Black walnut alley cropping is economically competitive with row crops in the Midwest USA

Wolz, K. J. & Delucia, E. H., Jan 1 2019, In : Ecological Applications. 29, 1, e01829.

Research output: Contribution to journalArticle

alley cropping
plantation forestry
crop
discount rate
profitability

Blue light is a universal signal for Escherichia coli chemoreceptors

Perlova, T., Gruebele, M. H. W. & Chemla, Y. R., Jan 1 2019, In : Journal of bacteriology. 201, 11, e0076218.

Research output: Contribution to journalArticle

Escherichia coli
Light
Bacteria
Proton-Motive Force
Tars

Breaking tolerance with engineered class I antigen-presenting molecules

Parks, C. A., Henning, K. R., Pavelko, K. D., Hansen, M. J., Van Keulen, V. P., Reed, B. K., Stone, J. D., Schrum, A. G., Gil, D., Kranz, D. M., Bordner, A. J., Barry, M. A. & Pease, L. R., Feb 19 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 8, p. 3136-3145 10 p.

Research output: Contribution to journalArticle

Histocompatibility Antigens Class I
Peptides
T-Lymphocytes
Autoantigens
Isoantigens

Broccoli consumption affects the human gastrointestinal microbiota

Kaczmarek, J. L., Liu, X., Charron, C. S., Novotny, J. A., Jeffery, E. H., Seifried, H. E., Ross, S. A., Miller, M. J., Swanson, K. S. & Holscher, H. D., Jan 1 2019, In : Journal of Nutritional Biochemistry. 63, p. 27-34 8 p.

Research output: Contribution to journalArticle

Brassica
Glucosinolates
Vegetables
Phytochemicals
Nutrition

BSD2 is a Rubisco-specific assembly chaperone, forms intermediary hetero-oligomeric complexes, and is nonlimiting to growth in tobacco

Conlan, B., Birch, R., Kelso, C., Holland, S., De Souza, A. P., Long, S. P., Beck, J. L. & Whitney, S. M., Apr 1 2019, In : Plant Cell and Environment. 42, 4, p. 1287-1301 15 p.

Research output: Contribution to journalArticle

Ribulose-Bisphosphate Carboxylase
ribulose-bisphosphate carboxylase
Tobacco
tobacco
Growth
Open Access
honeydew
Bombus terrestris
Apidae
Bombus
Aphididae

Bundle sheath chloroplast volume can house sufficient Rubisco to avoid limiting C4 photosynthesis during chilling

Pignon, C. P., Lundgren, M. R., Osborne, C. P. & Long, S. P., Jan 1 2019, In : Journal of experimental botany. 70, 1, p. 357-365 9 p.

Research output: Contribution to journalArticle

Ribulose-Bisphosphate Carboxylase
C4 photosynthesis
Photosynthesis
ribulose-bisphosphate carboxylase
Chloroplasts

CaMKK2 in myeloid cells is a key regulator of the immune-suppressive microenvironment in breast cancer

Racioppi, L., Nelson, E., Huang, W., Mukherjee, D., Lawrence, S. A., Lento, W., Masci, A. M., Jiao, Y., Park, S., York, B., Liu, Y., Baek, A. E., Drewry, D. H., Zuercher, W. J., Bertani, F. R., Businaro, L., Geradts, J., Hall, A., Means, A. R., Chao, N. & 2 othersChang, C. Y. & McDonnell, D. P., Dec 1 2019, In : Nature communications. 10, 1, 2450.

Research output: Contribution to journalArticle

Open Access
T-cells
regulators
Myeloid Cells
breast
Tumors

Cell-type specific polysome profiling from mammalian tissues

Seimetz, J., Arif, W., Bangru, S., Hernaez, M. & Kalsotra, A., Feb 15 2019, In : Methods. 155, p. 131-139 9 p.

Research output: Contribution to journalArticle

Polyribosomes
Tissue
Messenger RNA
Workflow
Gene Expression Regulation

Challenges in Characterizing the “Mommy Brain”

Laurent, H. K., Apr 3 2019, In : Parenting. 19, 1-2, p. 94-96 3 p.

Research output: Contribution to journalArticle

parenthood
activation
infant
brain
Brain

Characterization of Cas proteins for CRISPR-Cas editing in streptomycetes

Yeo, W. L., Heng, E., Tan, L. L., Lim, Y. W., Lim, Y. H., Hoon, S., Zhao, H., Zhang, M. M. & Wong, F. T., Jan 1 2019, In : Biotechnology and bioengineering.

Research output: Contribution to journalArticle

Clustered Regularly Interspaced Short Palindromic Repeats
CRISPR-Cas Systems
Genes
Streptococcus thermophilus
Francisella tularensis
Microspheres
Nanoparticles
Imaging techniques
nanoparticles
magnetic resonance

Characterization of the Candida orthopsilosis agglutinin-like sequence (ALS) genes

Lombardi, L., Zoppo, M., Rizzato, C., Bottai, D., Hernandez, A. G., Hoyer, L. L. & Tavanti, A., Apr 1 2019, In : PloS one. 14, 4, e0215912.

Research output: Contribution to journalArticle

Open Access
Agglutinins
Candida
agglutinins
Genes
nucleotide sequences

Characterization of the flavin monooxygenase involved in biosynthesis of the antimalarial FR-900098

Nguyen, K., DeSieno, M. A., Bae, B., Johannes, T. W., Cobb, R. E., Zhao, H. & Nair, S. K., Jan 1 2019, In : Organic and Biomolecular Chemistry. 17, 6, p. 1506-1518 13 p.

Research output: Contribution to journalArticle

dimethylaniline monooxygenase (N-oxide forming)
Flavin-Adenine Dinucleotide
biosynthesis
Biosynthesis
Antimalarials