Research Output 1960 2018

2018

Colorimetric imaging of layer-by-layer molecular deposition on nanoplasmonic lycurgus cup array

Hu, Y., Ameen, A., Hsiao, A. & Liu, G. L. Jan 1 2018 In : Sensors and Actuators, B: Chemical. 254, p. 827-833 7 p.

Research output: Contribution to journalArticle

Edema Disease of Swine
Artificial Organs
Molecules
Sensors
Adenofibroma

Enhancement of gama-aminobutyric acid (GABA) and other health-related metabolites in germinated red rice (Oryza sativa L.) by ultrasonication

Ding, J., Ulanov, A. V., Dong, M., Yang, T., Nemzer, B. V., Xiong, S., Zhao, S. & Feng, H. Jan 1 2018 In : Ultrasonics Sonochemistry. 40, p. 791-797 7 p.

Research output: Contribution to journalArticle

Aminobutyrates
Oryza sativa
Health
Acids
rice

Integrated spectroscopic analysis system with low vertical height for measuring liquid or solid assays

Wan, Y., Carlson, J. A., Al-Mulla, S. A., Peng, W., Long, K. D., Kesler, B. A., Su, P., Dallesasse, J. M. & Cunningham, B. T. Feb 1 2018 In : Sensors and Actuators, B: Chemical. 255, p. 935-943 9 p.

Research output: Contribution to journalArticle

Birth Certificates
liquids
Liquids
Fasciola
Butylene Glycols
2017

20x-Real time modeling and simulation of more electric aircraft thermally integrated electrical power systems

Cao, Y., Williams, M. A., Kearbey, B. J., Smith, A. T., Krein, P. T. & Alleyne, A. G. Feb 2 2017 2016 International Conference on Electrical Systems for Aircraft, Railway, Ship Propulsion and Road Vehicles and International Transportation Electrification Conference, ESARS-ITEC 2016. Institute of Electrical and Electronics Engineers Inc., 7841416

Research output: Chapter in Book/Report/Conference proceedingConference contribution

model
aircraft
simulation
power
system

27-Hydroxycholesterol, an endogenous selective estrogen receptor modulator

He, S. & Nelson, E. R. Oct 1 2017 In : Maturitas. 104, p. 29-35 7 p.

Research output: Contribution to journalReview article

Hydroxycholesterols
Selective Estrogen Receptor Modulators
Estrogen Receptors
Cholesterol
Supravalvular Aortic Stenosis

5-HT2C Agonists Modulate Schizophrenia-Like Behaviors in Mice

Pogorelov, V. M., Rodriguiz, R. M., Cheng, J., Huang, M., Schmerberg, C. M., Meltzer, H. Y., Roth, B. L., Kozikowski, A. P. & Wetsel, W. C. Apr 12 2017 In : Neuropsychopharmacology.

Research output: Contribution to journalArticle

Serotonin
Schizophrenia
Antipsychotic Agents
Dopamine
Amphetamine

A brief assessment tool for investigating facets of moral judgment from realistic vignettes

Kruepke, M., Molloy, E. K., Bresin, K., Barbey, A. K. & Verona, E. Jun 23 2017 In : Behavior Research Methods. p. 1-15 15 p.

Research output: Contribution to journalArticle

Moral judgment
Rating
Episodic Memory
Needs Assessment
Neurosciences

A brief assessment tool for investigating facets of moral judgment from realistic vignettes

Kruepke, M., Molloy, E. K., Bresin, K., Barbey, A. K. & Verona, E. 2017 In : Behavior Research Methods.

Research output: Contribution to journalArticle

A case study of machine learning hardware: Real-time source separation using Markov Random Fields via sampling-based inference

Ko, G. G. & Rutenbar, R. A. Jun 16 2017 2017 IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2017 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 2477-2481 5 p. 7952602

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Source separation
Mobile phones
Hardware
Acoustic streaming
Random access storage

ACC tutorial session proposal thermal and HVAC control systems: Challenges and opportunities

Alleyne, A. Jun 29 2017 2017 American Control Conference, ACC 2017. Institute of Electrical and Electronics Engineers Inc., p. 1364 1 p. 7963142

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Temperature control
Thermal energy
Galaxies
Security systems
Heat exchangers

Achieving uniformity and reproducibility for photonic crystal fluorescence enhanced disease diagnostic microarrays

Race, C. M., Kwon, L. & Cunningham, B. T. Jan 5 2017 IEEE Sensors, SENSORS 2016 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 7808961

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fluorescence
Photonic crystals
Assays
Scanning
Lasers

A comparative study of anthocyanin distribution in purple and blue corn coproducts from three conventional fractionation processes

Li, Q., Somavat, P., Singh, V., Chatham, L. & Gonzalez de Mejia, E. Sep 15 2017 In : Food Chemistry. 231, p. 332-339 8 p.

Research output: Contribution to journalArticle

corn
Anthocyanins
Zea mays
Aldehyde Dehydrogenase
Fractionation

A conditional probabilistic model for joint analysis of symptoms, diseases, and herbs in traditional Chinese medicine patient records

Wang, S., Huang, E. W., Zhang, R., Zhang, X., Liu, B., Zhou, X. & Zhai, C. Jan 17 2017 Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016. Institute of Electrical and Electronics Engineers Inc., p. 411-418 8 p. 7822553

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Chinese Traditional Medicine
Statistical Models
Aortic Valve Stenosis
Modern 1601-history
Prescriptions

A decentralized algorithm for control of autonomous agents coupled by feasibility constraints

Rosolia, U., Braghin, F., Alleyne, A. G., De Bruyne, S. & Sabbioni, E. Jun 29 2017 2017 American Control Conference, ACC 2017. Institute of Electrical and Electronics Engineers Inc., p. 3367-3372 6 p. 7963467

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Autonomous agents
Decentralized control
Derivatives
Communication

Adolescent depression linked to socioeconomic status? Molecular approaches for revealing premorbid risk factors

Uddin, M., Jansen, S. & Telzer, E. H. Mar 1 2017 In : BioEssays. 39, 3, 1600194

Research output: Contribution to journalArticle

Social Class
Depression
Hypopharyngeal Neoplasms
Environmental Exposure
Epigenomics

Advanced computing for social change - Educating and engaging our students to compete in a changing workforce∗

Gaither, K., Gomez, R., Akli, L., Mendenhall, R., Bland, M., Fratkin, S., Rivera, L. & DeStefano, L. Jul 9 2017 PEARC 2017 - Practice and Experience in Advanced Research Computing 2017: Sustainability, Success and Impact. Association for Computing Machinery, Vol. Part F128771, a50

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Students
Brain
Teaching
Visualization

A dynamic regression analysis tool for quantitative assessment of bacterial growth written in Python

Hoeflinger, J. L., Hoeflinger, D. E. & Miller, M. J. Jan 1 2017 In : Journal of Microbiological Methods. 132, p. 83-85 3 p.

Research output: Contribution to journalArticle

Boidae
Regression Analysis
Lactobacillus
Carbohydrates

Aerobic fitness, hippocampal viscoelasticity, and relational memory performance

Barbey, A. K. Mar 30 2017 In : NeuroImage. p. 179-188

Research output: Contribution to journalArticle

Open Access
Young Adult
Individuality
Health
Elasticity Imaging Techniques
Proxy

A functional endonuclease Q exists in the bacterial domain: Identification and characterization of endonuclease Q from Bacillus pumilus

Shiraishi, M., Ishino, S., Cann, I. & Ishino, Y. 2017 In : Bioscience, Biotechnology and Biochemistry. 81, 5, p. 931-937 7 p.

Research output: Contribution to journalArticle

Endonucleases
Bacillus
Repair
Archaea
DNA

A high-throughput cell microarray platform for correlative analysis of cell differentiation and traction forces

Kaylan, K. B., Kourouklis, A. P. & Underhill, G. H. Mar 1 2017 In : Journal of Visualized Experiments. 2017, 121, e55362

Research output: Contribution to journalArticle

Traction
Cell Differentiation
Microarrays
Canidae
Hydrogel

Alternating Rabacfosadine/Doxorubicin: Efficacy and Tolerability in Naïve Canine Multicentric Lymphoma

Thamm, D. H., Vail, D. M., Post, G. S., Fan, T. M., Phillips, B. S., Axiak-Bechtel, S., Elmslie, R. S., Klein, M. K. & Ruslander, D. A. May 1 2017 In : Journal of Veterinary Internal Medicine. 31, 3, p. 872-878 7 p.

Research output: Contribution to journalArticle

Doxorubicin
Canidae
Lymphoma
Dogs
dogs

A modular approach to the design, fabrication, and characterization of muscle-powered biological machines

Raman, R., Cvetkovic, C. & Bashir, R. Mar 1 2017 In : Nature Protocols. 12, 3, p. 519-533 15 p.

Research output: Contribution to journalArticle

Muscles
Actuators
Aldehyde Oxidoreductases
Bioengineering
Biocompatible Materials

Analysis and diagnosis of SLA violations in a production SaaS cloud

Di Martino, C., Sarkar, S., Ganesan, R., Kalbarczyk, Z. T. & Iyer, R. K. Mar 1 2017 In : IEEE Transactions on Reliability. 66, 1, p. 54-75 22 p., 7835304

Research output: Contribution to journalArticle

Data reduction
Failure modes
Availability
Industry

An automated microfluidic assay for the detection of cancer biomarkers in serum using photonic crystal enhanced fluorescence

Kwon, L., Race, C., Foreman, M. & Cunningham, B. Jan 5 2017 IEEE Sensors, SENSORS 2016 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 7808960

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Assays
Photonic crystals
Fluorescence
Biomarkers
Microfluidics

Ancient individuals from the North American Northwest Coast reveal 10,000 years of regional genetic continuity

Lindo, J., Achilli, A., Perego, U. A., Archer, D., Valdiosera, C., Petzelt, B., Mitchell, J., Worl, R., Dixon, E. J., Fifield, T. E., Rasmussen, M., Willerslev, E., Cybulski, J. S., Kemp, B. M., DeGiorgio, M. & Malhi, R. S. Apr 18 2017 In : Proceedings of the National Academy of Sciences of the United States of America. 114, 16, p. 4093-4098 6 p.

Research output: Contribution to journalArticle

coast
Pleistocene
genome
population structure
cave

Androgen receptor in the ovary theca cells plays a critical role in androgen-induced reproductive dysfunction

Ma, Y., Andrisse, S., Chen, Y., Childress, S., Xue, P., Wang, Z., Jones, D., Ko, C., Divall, S. & Wu, S. Jan 1 2017 In : Endocrinology. 158, 1, p. 98-108 11 p.

Research output: Contribution to journalArticle

Theca Cells
Dihydrotestosterone
Androgen Receptors
Androgens
Ovary
Trifluoperazine
Calmodulin
Fatty Acids
Escherichia coli
Lipids

AN EMPIRICAL STUDY OF THE IMPACT OF THE RENEWABLE FUEL STANDARD (RFS) ON THE PRODUCTION OF FUEL ETHANOL IN THE U.S.

Kesan, J. P., Yang, H. & Peres, I. F. Jan 1 2017 In : Utah Law Review OnLaw. 2017, 1, p. 159-206 48 p.

Research output: Contribution to journalArticle

Biofuels
Ethanol
Industry
Gasoline
Energy security

A new developmental mechanism for the separation of the mammalian middle ear ossicles from the jaw

Urban, D. J., Anthwal, N., Luo, Z. X., Maier, J. A., Sadier, A., Tucker, A. S. & Sears, K. E. Feb 8 2017 In : Proceedings of the Royal Society B: Biological Sciences. 284, 1848, 20162416

Research output: Contribution to journalArticle

Ear Ossicles
Middle Ear
Jaw
Cartilage
cartilage

A New Era of Genome Integration - Simply Cut and Paste!

Liu, Z., Liang, Y., Ang, E. L. & Zhao, H. Apr 21 2017 In : ACS Synthetic Biology. 6, 4, p. 601-609 9 p.

Research output: Contribution to journalReview article

Ointments
Genome
Lutheran Blood-Group System
Homologous Recombination
Cyclic AMP Receptor Protein

A new genome-mining tool redefines the lasso peptide biosynthetic landscape

Tietz, J. I., Schwalen, C. J., Patel, P. S., Maxson, T., Blair, P. M., Tai, H. C., Zakai, U. I. & Mitchell, D. A. May 1 2017 In : Nature Chemical Biology. 13, 5, p. 470-478 9 p.

Research output: Contribution to journalArticle

Genome
Peptides
Citrulline
Data Mining
Artificial Intelligence
corn
coproducts
cultivars
dry milling
sampling

A new mammalian model system for thalidomide teratogenesis: Monodelphis domestica

Sorensen, D., Sackett, A., Urban, D. J., Maier, J., Vargesson, N. & Sears, K. E. Jun 1 2017 In : Reproductive Toxicology. 70, p. 126-132 7 p.

Research output: Contribution to journalArticle

Monodelphis
Teratogenesis
Thalidomide
Defects
Opossums

An in-depth look into PTSD-depression comorbidity: A longitudinal study of chronically-exposed Detroit residents

Horesh, D., Lowe, S. R., Galea, S., Aiello, A. E., Uddin, M. & Koenen, K. C. Jan 15 2017 In : Journal of Affective Disorders. 208, p. 653-661 9 p.

Research output: Contribution to journalArticle

Post-Traumatic Stress Disorders
Longitudinal Studies
Comorbidity
Depression
Major Depressive Disorder

A Nitrogen-Doped Carbon Catalyst for Electrochemical CO2 Conversion to CO with High Selectivity and Current Density

Jhong, H. R. M., Tornow, C. E., Smid, B., Gewirth, A. A., Lyth, S. M. & Kenis, P. J. A. 2017 In : ChemSusChem. 10, 6, p. 1094-1099 6 p.

Research output: Contribution to journalArticle

Catalysts
catalyst
Afferent Loop Syndrome
Current density
density current

A novel method for predicting activity of cis-regulatory modules, based on a diverse training set

Yang, W. & Sinha, S. 2017 In : Bioinformatics. 33, 1, p. 1-7 7 p.

Research output: Contribution to journalArticle

Module
African horse sickness virus
Chemical analysis
Transcription Factors
Genome

Anti-inflammatory ω-3 endocannabinoid epoxides

McDougle, D. R., Watson, J. E., Abdeen, A. A., Adili, R., Caputo, M. P., Krapf, J. E., Johnson, R. W., Kilian, K. A., Holinstat, M. & Das, A. Jul 25 2017 In : Proceedings of the National Academy of Sciences of the United States of America. 114, 30, p. E6034-E6043

Research output: Contribution to journalArticle

Endocannabinoids
Epoxy Compounds
Anti-Inflammatory Agents
Acids
Omega-3 Fatty Acids

AntiSMASH 4.0 - improvements in chemistry prediction and gene cluster boundary identification

Blin, K., Wolf, T., Chevrette, M. G., Lu, X., Schwalen, C. J., Kautsar, S. A., Suarez Duran, H. G., De Los Santos, E. L. C., Kim, H. U., Nave, M., Dickschat, J. S., Mitchell, D. A., Shelest, E., Breitling, R., Takano, E., Lee, S. Y., Weber, T. & Medema, M. H. Jul 3 2017 In : Nucleic Acids Research. 45, W1, p. W36-W41

Research output: Contribution to journalArticle

Multigene Family
Genome
Anti-Bacterial Agents
Proteins
Food Preservatives

A plug-and-play pathway refactoring workflow for natural product research in Escherichia coli and Saccharomyces cerevisiae

Ren, H., Hu, P. & Zhao, H. Aug 1 2017 In : Biotechnology and Bioengineering. 114, 8, p. 1847-1854 8 p.

Research output: Contribution to journalArticle

Workflow
Biological Products
Saccharomyces cerevisiae
Escherichia coli
Genes

A point-of-care microfluidic biochip for quantification of CD64 expression from whole blood for sepsis stratification

Hassan, U., Ghonge, T., Reddy, B., Patel, M., Rappleye, M., Taneja, I., Tanna, A., Healey, R., Manusry, N., Price, Z., Jensen, T., Berger, J., Hasnain, A., Flaugher, E., Liu, S., Davis, B., Kumar, J., White, K. & Bashir, R. Jul 3 2017 In : Nature Communications. 8, 15949

Research output: Contribution to journalArticle

Microfluidics
Sepsis
blood
Biochips
Blood

Application of an advanced maximum likelihood estimation restoration method for enhanced-resolution and contrast in second-harmonic generation microscopy

Sivaguru, M., Kabir, M. M., Gartia, M. R., Biggs, D. S. C., Sivaguru, B. S., Sivaguru, V. A., Fried, G. A., Liu, G. L., Sadayappan, S. & Toussaint, K. C. Sep 1 2017 In : Journal of Microscopy. 267, 3, p. 397-408 12 p.

Research output: Contribution to journalArticle

Photons
Microscopy
Signal-To-Noise Ratio
Collagen
Fibrillar Collagens

A probabilistic approach for discovering difficult course topics using clickstream data

Boughoula, A., Geigle, C. & Zhai, C. X. Apr 12 2017 L@S 2017 - Proceedings of the 4th (2017) ACM Conference on Learning at Scale. Association for Computing Machinery, Inc, p. 303-306 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

student
Students
ranking
voter
course

A quantitative framework for the analysis of multimodal optical microscopy images

Bower, A. J., Chidester, B., Li, J., Zhao, Y., Marjanovic, M., Chaney, E. J., Do, M. N. & Boppart, S. A. 2017 In : Quantitative Imaging in Medicine and Surgery. 7, 1, p. 24-37 14 p.

Research output: Contribution to journalArticle

Microscopy
Cell Death
Datasets
Support Vector Machines

A roadmap for improving the representation of photosynthesis in Earth system models

Rogers, A., Medlyn, B. E., Dukes, J. S., Bonan, G., von Caemmerer, S., Dietze, M. C., Kattge, J., Leakey, A. D. B., Mercado, L. M., Niinemets, Ü., Prentice, I. C., Serbin, S. P., Sitch, S., Way, D. A. & Zaehle, S. Jan 1 2017 In : New Phytologist. 213, 1, p. 22-42 21 p.

Research output: Contribution to journalComment/debate

Photosynthesis
biosphere
photosynthesis
Vapor Pressure
Carbon Cycle

Aromatic thermosetting copolyester foam core and aluminum foam face three-layer sandwich composite for impact energy absorption

Bakir, M., Bahceci, E., Meyer, J. L., Economy, J. & Jasiuk, I. Jun 1 2017 In : Materials Letters. 196, p. 288-291 4 p.

Research output: Contribution to journalArticle

foams
Foams
Ambroxol
aluminum
Aluminum

Aromatic thermosetting copolyester nanocomposite foams: High thermal and mechanical performance lightweight structural materials

Bakir, M., Meyer, J. L., Economy, J. & Jasiuk, I. Aug 11 2017 In : Polymer (United Kingdom). 123, p. 311-320 10 p.

Research output: Contribution to journalArticle

Laryngeal Mucosa
Ambroxol
Foams
Nanocomposites
Filaricides

A Scalable Epitope Tagging Approach for High Throughput ChIP-Seq Analysis

Xiong, X., Zhang, Y., Yan, J., Jain, S., Chee, S., Ren, B. & Zhao, H. Jun 16 2017 In : ACS Synthetic Biology. 6, 6, p. 1034-1042 9 p.

Research output: Contribution to journalArticle

Chromatin Immunoprecipitation
Epitopes
Genes
Cyclic AMP Receptor Protein
Clustered Regularly Interspaced Short Palindromic Repeats

A standardized method for quantifying consistent individual differences in schooling behaviour

Pearish, S., Hostert, L. & Bell, A. M. Jan 1 2017 In : Journal of Fish Biology. 90, 1, p. 443-450 8 p.

Research output: Contribution to journalArticle

methodology
schooling behavior
aggregation behavior
fish
education

A systematic review of personality trait change through intervention

Roberts, B. W., Luo, J., Briley, D. A., Chow, P. I., Su, R. & Hill, P. L. Feb 1 2017 In : Psychological Bulletin. 143, 2, p. 117-141 25 p.

Research output: Contribution to journalArticle

Personality
Personality traits
Therapy
Public Policy
Anxiety Disorders

Attack induced common-mode failures on PLC-based safety system in a nuclear power plant: Practical experience report

Lim, B., Chen, D., An, Y., Kalbarczyk, Z. & Iyer, R. May 5 2017 Proceedings - 2017 IEEE 22nd Pacific Rim International Symposium on Dependable Computing, PRDC 2017. IEEE Computer Society, p. 205-210 6 p. 7920614

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Programmable logic controllers
Nuclear power plants
Failure modes
Testbeds
Security systems