Research Output 1960 2018

2018
bacteriology
decarboxylation
coenzyme A
chemical compounds
carboxylation

Acquisition of the phosphate transporter NptA enhances Staphylococcus aureus pathogenesis by improving phosphate uptake in divergent environments

Kelliher, J. L., Radin, J. N., Grim, K. P., Solórzano, P. K. P., Degnan, P. H. & Kehl-Fie, T. E. Jan 1 2018 In : Infection and Immunity. 86, 1, e00631-17

Research output: Research - peer-reviewArticle

Bacterial Gene Expression Regulation
Phosphate Transport Proteins
Staphylococcal Infections
Bacterial Proteins
Membrane Transport Proteins

Airyscan super-resolution microscopy of mitochondrial morphology and dynamics in living tumor cells

Kolossov, V. L., Sivaguru, M., Huff, J., Luby, K., Kanakaraju, K. & Gaskins, H. R. Feb 1 2018 In : Microscopy Research and Technique. 81, 2, p. 115-128 14 p.

Research output: Research - peer-reviewArticle

tumors
microscopy
cells
Tumors
Microscopic examination

Alley cropping: Global patterns of species composition and function

Wolz, K. J. & DeLucia, E. H. Jan 15 2018 In : Agriculture, Ecosystems and Environment. 252, p. 61-68 8 p.

Research output: Research - peer-reviewReview article

alley cropping
species diversity
crop
crops
Populus

A Revised Sociogenomic Model of Personality Traits

Roberts, B. W. Feb 1 2018 In : Journal of Personality. 86, 1, p. 23-35 13 p.

Research output: Research - peer-reviewArticle

Personality
Developmental Biology
Reading
Phenotype
Life History Traits

BETYdb: a yield, trait, and ecosystem service database applied to second-generation bioenergy feedstock production

LeBauer, D., Kooper, R., Mulrooney, P., Rohde, S., Wang, D., Long, S. P. & Dietze, M. C. Jan 1 2018 In : GCB Bioenergy. 10, 1, p. 61-71 11 p.

Research output: Research - peer-reviewArticle

bioenergy
feedstocks
biofuels
ecosystem services
biofuel

Biophotonics: The big picture

Marcu, L., Boppart, S. A., Hutchinson, M. R., Popp, J. & Wilson, B. C. Feb 1 2018 In : Journal of Biomedical Optics. 23, 2, 021103

Research output: Research - peer-reviewArticle

physical sciences
microbalances

Biorefinery for combined production of jet fuel and ethanol from lipid-producing sugarcane: a techno-economic evaluation

Kumar, D., Long, S. P. & Singh, V. Feb 1 2018 In : GCB Bioenergy. 10, 2, p. 92-107 16 p.

Research output: Research - peer-reviewArticle

biorefining
economic analysis
sugarcane
ethanol
lipids

Changes in behavior and brain immediate early gene expression in male threespined sticklebacks as they become fathers

Kent, M. & Bell, A. M. Jan 1 2018 In : Hormones and Behavior. 97, p. 102-111 10 p.

Research output: Research - peer-reviewArticle

Smegmamorpha
Immediate-Early Genes
Fathers
Gene Expression
Brain

Colorimetric imaging of layer-by-layer molecular deposition on nanoplasmonic lycurgus cup array

Hu, Y., Ameen, A., Hsiao, A. & Liu, G. L. Jan 1 2018 In : Sensors and Actuators, B: Chemical. 254, p. 827-833 7 p.

Research output: Research - peer-reviewArticle

Imaging techniques
sensors
molecules
Molecules
Sensors
pollen
textures
illumination
microscopy
Pollen

Conversion of grazed pastures to energy cane as a biofuel feedstock alters the emission of GHGs from soils in Southeastern United States

Gomez-Casanovas, N., DeLucia, N. J., Hudiburg, T. W., Bernacchi, C. J. & DeLucia, E. H. Jan 1 2018 In : Biomass and Bioenergy. 108, p. 312-322 11 p.

Research output: Research - peer-reviewArticle

demand analysis
energy crop
perennial plant
sugar cane
bioenergy

CryoEM-based hybrid modeling approaches for structure determination

Cassidy, C. K., Himes, B. A., Luthey-Schulten, Z. & Zhang, P. Jun 1 2018 In : Current Opinion in Microbiology. 43, p. 14-23 10 p.

Research output: Research - peer-reviewReview article

Cryoelectron Microscopy
Surveys and Questionnaires
Clostridium beijerinckii
Flavin Mononucleotide
Fluorescence
Oxygen
Proteins

Direct fermentation of Jerusalem artichoke tuber powder for production of L-lactic acid and D-lactic acid by metabolically engineered Kluyveromyces marxianus

Bae, J. H., Kim, H. J., Kim, M. J., Sung, B. H., Jeon, J. H., Kim, H. S., Jin, Y. S., Kweon, D. H. & Sohn, J. H. Jan 20 2018 In : Journal of Biotechnology. 266, p. 27-33 7 p.

Research output: Research - peer-reviewArticle

Kluyveromyces
Metabolic Engineering
Inulin
Helianthus
L-Lactate Dehydrogenase

Distribution comparison and risk assessment of free-floating and particle-attached bacterial pathogens in urban recreational water: Implications for water quality management

Fang, T., Cui, Q., Huang, Y., Dong, P., Wang, H., Liu, W. T. & Ye, Q. Feb 1 2018 In : Science of the Total Environment. 613-614, p. 428-438 11 p.

Research output: Research - peer-reviewArticle

risk assessment
pathogen
water
distribution
particle

Double dissociation of structure-function relationships in memory and fluid intelligence observed with magnetic resonance elastography

Johnson, C. L., Schwarb, H., Horecka, K. M., McGarry, M. D. J., Hillman, C. H., Kramer, A. F., Cohen, N. J. & Barbey, A. K. May 1 2018 In : NeuroImage. 171, p. 99-106 8 p.

Research output: Research - peer-reviewArticle

Elasticity Imaging Techniques
Intelligence
Hippocampus
Brain
Prefrontal Cortex

Dysbiosis of the fecal microbiota in feedlot cattle with hemorrhagic diarrhea

Zeineldin, M., Aldridge, B. & Lowe, J. Feb 1 2018 In : Microbial Pathogenesis. 115, p. 123-130 8 p.

Research output: Research - peer-reviewArticle

Dysbiosis
Microbiota
Diarrhea
Gastrointestinal Diseases
Ruminococcus

Effect of sorting boar spermatozoa by sex chromosomes on oviduct cell binding

Winters, R. A., Nettenstrom, L. M., Lopez, D. G., Willenburg, K. L., Vishwanath, R., Bovin, N. V. & Miller, D. J. Mar 1 2018 In : Theriogenology. 108, p. 22-28 7 p.

Research output: Research - peer-reviewArticle

sex chromosomes
oviducts
boars
sorting
spermatozoa

Effects of controlled germination on selected physicochemical and functional properties of whole-wheat flour and enhanced γ-aminobutyric acid accumulation by ultrasonication

Ding, J., Hou, G. G., Nemzer, B. V., Xiong, S., Dubat, A. & Feng, H. Mar 15 2018 In : Food Chemistry. 243, p. 214-221 8 p.

Research output: Research - peer-reviewArticle

whole wheat flour
gamma-aminobutyric acid
functional properties
physicochemical properties
germination

Effects of environmental aging on physical properties of aromatic thermosetting copolyester matrix neat and nanocomposite foams

Bakir, M., Henderson, C. N., Meyer, J. L., Oh, J., Miljkovic, N., Kumosa, M., Economy, J. & Jasiuk, I. Jan 1 2018 In : Polymer Degradation and Stability. 147, p. 49-56 8 p.

Research output: Research - peer-reviewArticle

foams
nanocomposites
physical properties
matrices
Foams

Engineering and evolution of saccharomyces cerevisiae to produce biofuels and chemicals

Turner, T. L., Kim, H., Kong, I. I., Liu, J. J., Zhang, G. C. & Jin, Y. S. Jan 1 2018 Advances in Biochemical Engineering/Biotechnology. Springer Science and Business Media Deutschland GmbH, Vol. 162, p. 175-215 41 p. (Advances in Biochemical Engineering/Biotechnology; vol. 162)

Research output: ResearchChapter

Biofuels
Saccharomyces cerevisiae
Fossil Fuels
Genomics
Biomass

Enhancement of gama-aminobutyric acid (GABA) and other health-related metabolites in germinated red rice (Oryza sativa L.) by ultrasonication

Ding, J., Ulanov, A. V., Dong, M., Yang, T., Nemzer, B. V., Xiong, S., Zhao, S. & Feng, H. Jan 1 2018 In : Ultrasonics Sonochemistry. 40, p. 791-797 7 p.

Research output: Research - peer-reviewArticle

metabolites
rice
health
acids
augmentation

Epigenetic profiles associated with major depression in the human brain

Bustamante, A. C., Armstrong, D. L. & Uddin, M. Feb 1 2018 In : Psychiatry Research. 260, p. 439-442 4 p.

Research output: Research - peer-reviewArticle

Epigenomics
Methylation
Depression
Brain
Genes

Fatigue behavior of high-entropy alloys: A review

Chen, P. Y., Lee, C., Wang, S. Y., Seifi, M., Lewandowski, J. J., Dahmen, K. A., Jia, H. L., Xie, X., Chen, B. L., Yeh, J. W., Tsai, C. W., Yuan, T. & Liaw, P. K. Feb 1 2018 In : Science China Technological Sciences. 61, 2, p. 168-178 11 p.

Research output: Research - peer-reviewReview article

Entropy
Fatigue of materials
Fatigue crack propagation
Bending (deformation)
Solid solutions

FKBP5 DNA methylation does not mediate the association between childhood maltreatment and depression symptom severity in the Detroit Neighborhood Health Study

Bustamante, A. C., Aiello, A. E., Guffanti, G., Galea, S., Wildman, D. E. & Uddin, M. Jan 1 2018 In : Journal of Psychiatric Research. 96, p. 39-48 10 p.

Research output: Research - peer-reviewArticle

DNA Methylation
Health
Gene Expression
Genes
Response Elements

Glucose stimulates intestinal epithelial crypt proliferation by modulating cellular energy metabolism

Zhou, W., Ramachandran, D., Mansouri, A. & Dailey, M. J. Apr 1 2018 In : Journal of Cellular Physiology. 233, 4, p. 3465-3475 11 p.

Research output: Research - peer-reviewArticle

Energy Metabolism
Cell Proliferation
Glucose
Food
Nutrients

HVAC system modeling and control: Vapor compression system modeling and control

Rasmussen, B. P., Price, C., Koeln, J., Keating, B. & Alleyne, A. Jan 1 2018 Advances in Industrial Control. 9783319684611 ed. Springer International Publishing, p. 73-103 31 p. (Advances in Industrial Control; no. 9783319684611)

Research output: ResearchChapter

Vapors
Auxiliary equipment
Intelligent buildings
Air conditioning
Heat exchangers

Identification of a gene encoding a flavoprotein involved in bile acid metabolism by the human gut bacterium Clostridium scindens ATCC 35704

Harris, S. C., Devendran, S., Alves, J. M. P., Mythen, S. M., Hylemon, P. B. & Ridlon, J. M. Mar 1 2018 In : Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids. 1863, 3, p. 276-283 8 p.

Research output: Research - peer-reviewArticle

Flavoproteins
Clostridium
Bile Acids and Salts
Bacteria
Genes

Impact of stress on the gut microbiome of free-ranging western lowland gorillas

Vlčková, K., Shutt-Phillip, K., Heisterman, M., Pafčo, B., Petrželkov, K. J., Todd, A., Modrý, D., Nelson, K. E., Wilson, B. A., Stumpf, R. M., White, B. A., Leigh, S. R. & Gomez, A. Jan 1 2018 In : Microbiology (United Kingdom). 164, 1, p. 40-44 5 p., 000587

Research output: Research - peer-reviewArticle

Gorilla gorilla
Bacteria
Gastrointestinal Microbiome
Bacterial Genes
Physiological Stress

Infant HPA axis as a potential mechanism linking maternal mental health and infant telomere length

Nelson, B. W., Allen, N. B. & Laurent, H. Feb 1 2018 In : Psychoneuroendocrinology. 88, p. 38-46 9 p.

Research output: Research - peer-reviewArticle

Telomere
Mental Health
Maternal Health
Hydrocortisone
Mothers

Integrated spectroscopic analysis system with low vertical height for measuring liquid or solid assays

Wan, Y., Carlson, J. A., Al-Mulla, S. A., Peng, W., Long, K. D., Kesler, B. A., Su, P., Dallesasse, J. M. & Cunningham, B. T. Feb 1 2018 In : Sensors and Actuators, B: Chemical. 255, p. 935-943 9 p.

Research output: Research - peer-reviewArticle

spectroscopic analysis
liquids
Spectroscopic analysis
Liquids
Assays

Intraoperative optical coherence tomography of the human thyroid: Feasibility for surgical assessment

Erickson-Bhatt, S. J., Mesa, K. J., Marjanovic, M., Chaney, E. J., Ahmad, A., Huang, P. C., Liu, Z. G., Cunningham, K. & Boppart, S. A. Jan 1 2018 (Accepted/In press) In : Translational Research.

Research output: Research - peer-reviewArticle

Optical Coherence Tomography
Thyroid Gland
Thyroid Nodule
Thyroidectomy
Operating Rooms

Label-free optical imaging technologies for rapid translation and use during intraoperative surgical and tumor margin assessment

Boppart, S. A., Brown, J. Q., Farah, C. S., Kho, E., Marcu, L., Saunders, C. M. & Sterenborg, H. J. C. M. Feb 1 2018 In : Journal of Biomedical Optics. 23, 2, 021104

Research output: Research - peer-reviewArticle

Labels
Tumors
Imaging techniques
margins
tumors

Metagenomic characterization of biofilter microbial communities in a full-scale drinking water treatment plant

Oh, S., Hammes, F. & Liu, W. T. Jan 1 2018 In : Water Research. 128, p. 278-285 8 p.

Research output: Research - peer-reviewArticle

microbial community
filter
drinking water treatment
water treatment plant
Water treatment plants

Multi-modal fitness and cognitive training to enhance fluid intelligence

Daugherty, A. M., Zwilling, C., Paul, E. J., Sherepa, N., Allen, C., Kramer, A. F., Hillman, C. H., Cohen, N. J. & Barbey, A. K. Jan 1 2018 In : Intelligence. 66, p. 32-43

Research output: Research - peer-reviewArticle

Multi-zone temperature modeling and control

Koeln, J., Keating, B., Alleyne, A., Price, C. & Rasmussen, B. P. Jan 1 2018 Advances in Industrial Control. 9783319684611 ed. Springer International Publishing, p. 139-166 28 p. (Advances in Industrial Control; no. 9783319684611)

Research output: ResearchChapter

Thermal energy
Temperature control
Capacitors
Cooling
Heating

Myogenic potential of mesenchymal stem cells isolated from porcine adipose tissue

Milner, D. J., Bionaz, M., Monaco, E., Cameron, J. A. & Wheeler, M. B. Jan 9 2018 (Accepted/In press) In : Cell and Tissue Research. p. 1-16 16 p.

Research output: Research - peer-reviewArticle

Mesenchymal Stromal Cells
Adipose Tissue
Swine
Skeletal Muscle Fibers
Muscles

Optimization problem formulation framework with application to engineering systems

Crossley, W. A., Luan, S., Allison, J. T. & Thurston, D. L. Jan 1 2018 (Accepted/In press) In : Systems Engineering.

Research output: Research - peer-reviewArticle

Economics
Civil aviation
Wind turbines

Origin and phylogeography of African savannah elephants (Loxodonta africana) in Kruger and nearby parks in southern Africa

de Flamingh, A., Roca, A. L. & van Aarde, R. J. Feb 1 2018 In : Conservation Genetics. 19, 1, p. 155-167 13 p.

Research output: Research - peer-reviewArticle

Loxodonta africana
Elephantidae
phylogeography
Southern Africa
savannas

Out of harm's way: Secure versus insecure-disorganized attachment predicts less adolescent risk taking related to childhood poverty

Delker, B. C., Bernstein, R. E. & Laurent, H. K. Feb 1 2018 In : Development and Psychopathology. 30, 1, p. 283-296 14 p.

Research output: Research - peer-reviewArticle

Poverty
Risk-Taking
National Institute of Child Health and Human Development (U.S.)
Disease Susceptibility
Child Care

Papain-like cysteine proteases in Carica papaya: Lineage-specific gene duplication and expansion

Liu, J., Sharma, A., Niewiara, M. J., Singh, R., Ming, R. & Yu, Q. Jan 6 2018 In : BMC Genomics. 19, 1, 26

Research output: Research - peer-reviewArticle

Carica
Gene Duplication
Papain
Cysteine Proteases
Genes

Pathway design, engineering, and optimization

Garcia-Ruiz, E., HamediRad, M. & Zhao, H. Jan 1 2018 Advances in Biochemical Engineering/Biotechnology. Springer Science and Business Media Deutschland GmbH, Vol. 162, (Advances in Biochemical Engineering/Biotechnology; vol. 162)

Research output: ResearchChapter

Biofuels
Enzymes
Pharmaceutical Preparations
Microorganisms

Physicochemical properties of germinated dehulled rice flour and energy requirement in germination as affected by ultrasound treatment

Ding, J., Hou, G. G., Dong, M., Xiong, S., Zhao, S. & Feng, H. Mar 1 2018 In : Ultrasonics Sonochemistry. 41, p. 484-491 8 p.

Research output: Research - peer-reviewArticle

flour
germination
energy requirements
rice
requirements

Production of d-arabitol from d-xylose by the oleaginous yeast Rhodosporidium toruloides IFO0880

Jagtap, S. S. & Rao, C. V. Jan 1 2018 In : Applied Microbiology and Biotechnology. 102, 1, p. 143-151 9 p.

Research output: Research - peer-reviewArticle

Xylose
Yeasts
arabitol
Growth
Sugar Alcohols

Programmable Payload Release from Transient Polymer Microcapsules Triggered by a Specific Ion Coactivation Effect

Tang, S., Tang, L., Lu, X., Liu, H. & Moore, J. S. Jan 10 2018 In : Journal of the American Chemical Society. 140, 1, p. 94-97 4 p.

Research output: Research - peer-reviewArticle

polymer
ion
effect
Capsules
Polymers

Radioactive Seed Localization Versus Wire Localization for Nonpalpable Breast Lesions: A Two-Year Initial Experience at a Large Community Hospital

Stelle, L., Schoenheit, T., Brubaker, A., Tang, X., Qu, P., Cradock, K. & Higham, A. Jan 1 2018 In : Annals of Surgical Oncology. 25, 1, p. 131-136 6 p.

Research output: Research - peer-reviewArticle

Community Hospital
Seeds
Breast
Segmental Mastectomy
Operating Rooms

Recent developments in the application of P450 based biocatalysts

Wei, Y., Ang, E. L. & Zhao, H. Apr 1 2018 In : Current Opinion in Chemical Biology. 43, p. 1-7 7 p.

Research output: Research - peer-reviewReview article

Mixed Function Oxygenases
Enzymes
Biological Products
Cytochrome P-450 Enzyme System
Biosynthesis

SHINE+: A General Framework for Domain-Specific Entity Linking with Heterogeneous Information Networks

Shen, W., Han, J., Wang, J., Yuan, X. & Yang, Z. Feb 1 2018 In : IEEE Transactions on Knowledge and Data Engineering. 30, 2, p. 353-366 14 p., 7990163

Research output: Research - peer-reviewArticle

Statistical Models

Sparsity of Linear Discrete-Time Optimal Control Problems with $l-1$ Objectives

Rao, C. V. Feb 1 2018 In : IEEE Transactions on Automatic Control. 63, 2, p. 513-517 5 p., 7993042

Research output: Research - peer-reviewArticle

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